RLG00000030704

GMP synthase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
66169888 .. 66170832
945 bp
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UTR
Exon/CDS
Intron
RLM00000030704

Sequence Viewer

Length: 327 bp
ATGGGACGCAGGAGATGGAGTATTGTGGTGGAGATGTTCTCAGCTCCGCCCCCAATATCTGAGAAGCAGGAGTATGGAAAGATGGAGATTGTGGTGGAGCGGAATTCAGGGATTTTCGGGTCTAAGAGAGGTTGGGGATTTTCGAAGTCAAAGGCTAGAGGTTCAAAGACGCCTTCACTTGGAACCCATCTTGTAGAGAGATTTGCGAAGTTTGCTAAAGTAACTGTTAGAGACTTGAAGCTGTCATCGAAGTATGAGAGAGCCATTGTTAATTCCATTCAGGTGTGGGATGCAACTACAGCTGATCCTAAATTGCTGGTTTTTTGA

Protein Analysis

109

Amino Acids

12.21

Weight (kDa)

10.32

Isoelectric Point (pI)

36.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025103)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0265381 RchiOBHm_Chr7g0217041
rosa_laevigata RLG00000030704

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 100
AciI CCGC 2 cut(s) 47, 100
AclWI GGATC 1 cut(s) 299
AcsI RAATTY 1 cut(s) 103
AcyI GRCGYC 1 cut(s) 170
AfiI CCNNNNNNNGG 1 cut(s) 179
AgsI TTSAA 2 cut(s) 165, 238
AluBI AGCT 3 cut(s) 44, 241, 302
AluI AGCT 3 cut(s) 44, 241, 302
Alw26I GTCTC 1 cut(s) 225
AlwI GGATC 1 cut(s) 299
ApoI RAATTY 1 cut(s) 103
AsuII TTCGAA 1 cut(s) 143
BccI CCATC 3 cut(s) 9, 76, 195
BcoDI GTCTC 1 cut(s) 225
BfaI CTAG 1 cut(s) 156
BfmI CTRYAG 1 cut(s) 297
BmiI GGNNCC 1 cut(s) 184
BmsI GCATC 1 cut(s) 280
BplI GAGNNNNNCTC 2 cut(s) 23, 55
Bpu14I TTCGAA 1 cut(s) 143
BsaHI GRCGYC 1 cut(s) 170
BsaXI ACNNNNNCTCC 1 cut(s) 34
Bsc4I CCNNNNNNNGG 1 cut(s) 179
BseGI GGATG 1 cut(s) 295
BseLI CCNNNNNNNGG 1 cut(s) 179
BseMII CTCAG 2 cut(s) 51, 54
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 1 cut(s) 179
BsmAI GTCTC 1 cut(s) 225
BsmFI GGGAC 1 cut(s) 18
Bsp119I TTCGAA 1 cut(s) 143
Bsp143I GATC 1 cut(s) 304
BspACI CCGC 2 cut(s) 47, 100
BspCNI CTCAG 2 cut(s) 52, 53
BspLI GGNNCC 1 cut(s) 184
BspPI GGATC 1 cut(s) 299
BspT104I TTCGAA 1 cut(s) 143
BsrBI CCGCTC 1 cut(s) 100
BssMI GATC 1 cut(s) 304
BssNI GRCGYC 1 cut(s) 170
Bst4CI ACNGT 1 cut(s) 226
BstACI GRCGYC 1 cut(s) 170
BstBI TTCGAA 1 cut(s) 143
BstDEI CTNAG 3 cut(s) 40, 60, 123
BstF5I GGATG 1 cut(s) 295
BstKTI GATC 1 cut(s) 307
BstMAI GTCTC 1 cut(s) 225
BstMBI GATC 1 cut(s) 304
BstMWI GCNNNNNNNGC 2 cut(s) 212, 299
BstSFI CTRYAG 1 cut(s) 297
BtsCI GGATG 1 cut(s) 295
CseI GACGC 2 cut(s) 15, 178
CviJI RGCY 5 cut(s) 44, 155, 241, 263, 302
CviKI_1 RGCY 5 cut(s) 44, 155, 241, 263, 302
DdeI CTNAG 3 cut(s) 40, 60, 123
DpnI GATC 1 cut(s) 306
DpnII GATC 1 cut(s) 304
EciI GGCGGA 1 cut(s) 36
EcoRI GAATTC 1 cut(s) 103
FaiI YATR 2 cut(s) 75, 255
FaqI GGGAC 1 cut(s) 18
FokI GGATG 1 cut(s) 302
FspBI CTAG 1 cut(s) 156
HgaI GACGC 2 cut(s) 15, 178
Hin1I GRCGYC 1 cut(s) 170
Hpy188I TCNGA 1 cut(s) 61
HpyAV CCTTC 1 cut(s) 183
HpyCH4III ACNGT 1 cut(s) 226
HpyCH4V TGCA 1 cut(s) 293
HpyF10VI GCNNNNNNNGC 2 cut(s) 212, 299
HpyF3I CTNAG 3 cut(s) 40, 60, 123
Hsp92I GRCGYC 1 cut(s) 170
Kzo9I GATC 1 cut(s) 304
LmnI GCTCC 2 cut(s) 49, 97
LpnPI CCDG 4 cut(s) 53, 93, 266, 302
LweI GCATC 1 cut(s) 280
MaeI CTAG 1 cut(s) 156
MaeIII GTNAC 1 cut(s) 220
MalI GATC 1 cut(s) 306
MbiI CCGCTC 1 cut(s) 100
MboI GATC 1 cut(s) 304
MluCI AATT 3 cut(s) 103, 271, 311
MnlI CCTC 2 cut(s) 122, 152
MseI TTAA 1 cut(s) 270
MslI CAYNNNNRTG 1 cut(s) 281
MspA1I CMGCKG 1 cut(s) 302
MwoI GCNNNNNNNGC 2 cut(s) 212, 299
NdeII GATC 1 cut(s) 304
NlaIV GGNNCC 1 cut(s) 184
NspV TTCGAA 1 cut(s) 143
PspN4I GGNNCC 1 cut(s) 184
PvuII CAGCTG 1 cut(s) 302
RseI CAYNNNNRTG 1 cut(s) 281
SaqAI TTAA 1 cut(s) 270
Sau3AI GATC 1 cut(s) 304
SetI ASST 6 cut(s) 46, 133, 163, 243, 285, 304
SfaNI GCATC 1 cut(s) 280
SfcI CTRYAG 1 cut(s) 297
SfuI TTCGAA 1 cut(s) 143
SgeI CNNG 9 cut(s) 22, 80, 120, 130, 168, 191, 203, 247, 293
SmiMI CAYNNNNRTG 1 cut(s) 281
Sse9I AATT 3 cut(s) 103, 271, 311
SsiI CCGC 2 cut(s) 47, 100
SspMI CTAG 1 cut(s) 156
TaaI ACNGT 1 cut(s) 226
TaqI TCGA 2 cut(s) 143, 248
TasI AATT 3 cut(s) 103, 271, 311
Tru1I TTAA 1 cut(s) 270
Tru9I TTAA 1 cut(s) 270
XapI RAATTY 1 cut(s) 103
XspI CTAG 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.