RchiOBHm_Chr6g0290301
HSP70 Family

Heat shock 70 kDa protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
53380239 .. 53380719
481 bp
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UTR
Exon/CDS
Intron
PRQ26044

Sequence Viewer

Length: 387 bp
ATGGGTGCAGGATACTGTGATGTTGCCATAAGTGTGACAGCTGAAGAGGCACCACGAGGAATTTCTGAAATAATTGCCTTAACAGGAAGTGCCATTGGAGGAGAAGACTTGCTTCAGAATATGATGCGTCATCTGTTGCCAAATGCAGAGAATCTTTTGACAAGTCATGGAGTTGACGAAATCAAATCAAAGGGGTTACTTCGAGTTGCAACACAGAATGCAATCCAGAGTCTCTCCTCCCAAAATTCTGTTCAAATTGATGTTGACTTGGGAAATGGGATGAAAATCTGCAAGGTAGTGGACCGAGAAGAATTTGAGGAAGTTAATCGTGCAGTATTTAATAAGTGTGTTAGCCTCATATCCAGTGTTTGCATGATGCAAAGGTAA

Protein Analysis

128

Amino Acids

13.79

Weight (kDa)

4.94

Isoelectric Point (pI)

29.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024688)

Species Orthologous Gene IDs
pyrus_communis pycom13g16460
rosa_chinensis RchiOBHm_Chr6g0290301
rosa_samantha Rh6CG335100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 49
AcsI RAATTY 3 cut(s) 60, 244, 311
AcuI CTGAAG 2 cut(s) 63, 98
AgsI TTSAA 1 cut(s) 254
AjuI GAANNNNNNNTTGG 2 cut(s) 234, 266
AluBI AGCT 1 cut(s) 41
AluI AGCT 1 cut(s) 41
Alw26I GTCTC 1 cut(s) 236
ApoI RAATTY 3 cut(s) 60, 244, 311
AspS9I GGNCC 1 cut(s) 301
AvaII GGWCC 1 cut(s) 301
BanI GGYRCC 1 cut(s) 49
BauI CACGAG 1 cut(s) 54
BbsI GAAGAC 1 cut(s) 111
BciVI GTATCC 1 cut(s) 5
BcoDI GTCTC 1 cut(s) 236
BfuI GTATCC 1 cut(s) 5
Bme18I GGWCC 1 cut(s) 301
BmgT120I GGNCC 1 cut(s) 301
BmiI GGNNCC 1 cut(s) 51
BmsI GCATC 2 cut(s) 114, 366
BpiI GAAGAC 1 cut(s) 111
BsaBI GATNNNNATC 1 cut(s) 284
Bse1I ACTGG 1 cut(s) 363
Bse8I GATNNNNATC 1 cut(s) 284
BseGI GGATG 1 cut(s) 285
BseJI GATNNNNATC 1 cut(s) 284
BseNI ACTGG 1 cut(s) 363
BseRI GAGGAG 2 cut(s) 114, 226
BsgI GTGCAG 2 cut(s) 27, 351
BshNI GGYRCC 1 cut(s) 49
BsmAI GTCTC 1 cut(s) 236
BsmI GAATGC 1 cut(s) 223
BspLI GGNNCC 1 cut(s) 51
BspT107I GGYRCC 1 cut(s) 49
BsrI ACTGG 1 cut(s) 363
BssSI CACGAG 1 cut(s) 54
Bst2BI CACGAG 1 cut(s) 54
Bst4CI ACNGT 1 cut(s) 17
Bst6I CTCTTC 1 cut(s) 39
BstF5I GGATG 1 cut(s) 285
BstMAI GTCTC 1 cut(s) 236
BstMWI GCNNNNNNNGC 1 cut(s) 47
BstV2I GAAGAC 1 cut(s) 111
BsuI GTATCC 1 cut(s) 5
BtsCI GGATG 1 cut(s) 285
BtsIMutI CAGTG 1 cut(s) 370
Cfr13I GGNCC 1 cut(s) 301
CseI GACGC 1 cut(s) 116
CviAII CATG 2 cut(s) 167, 373
CviJI RGCY 2 cut(s) 41, 354
CviKI_1 RGCY 2 cut(s) 41, 354
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco47I GGWCC 1 cut(s) 301
Eco57I CTGAAG 2 cut(s) 63, 98
FaeI CATG 2 cut(s) 170, 376
FaiI YATR 5 cut(s) 29, 122, 168, 359, 374
FalI AAGNNNNNCTT 2 cut(s) 96, 128
FatI CATG 2 cut(s) 166, 372
FokI GGATG 1 cut(s) 292
HgaI GACGC 1 cut(s) 116
Hin1II CATG 2 cut(s) 170, 376
HincII GTYRAC 2 cut(s) 175, 265
HindII GTYRAC 2 cut(s) 175, 265
HinfI GANTC 2 cut(s) 151, 229
Hpy166II GTNNAC 3 cut(s) 175, 265, 301
Hpy188I TCNGA 2 cut(s) 67, 117
Hpy188III TCNNGA 1 cut(s) 226
Hpy8I GTNNAC 3 cut(s) 175, 265, 301
HpyCH4III ACNGT 1 cut(s) 17
HpyCH4V TGCA 8 cut(s) 8, 146, 209, 221, 291, 332, 372, 379
HpyF10VI GCNNNNNNNGC 1 cut(s) 47
Hsp92II CATG 2 cut(s) 170, 376
LpnPI CCDG 3 cut(s) 69, 239, 376
LweI GCATC 2 cut(s) 114, 366
MaeIII GTNAC 2 cut(s) 34, 195
MboII GAAGA 3 cut(s) 56, 116, 320
MluCI AATT 5 cut(s) 60, 72, 244, 255, 311
MlyI GAGTC 1 cut(s) 238
MnlI CCTC 6 cut(s) 40, 50, 92, 247, 310, 365
MseI TTAA 3 cut(s) 80, 324, 339
MslI CAYNNNNRTG 1 cut(s) 32
MspA1I CMGCKG 1 cut(s) 41
Mva1269I GAATGC 1 cut(s) 223
MwoI GCNNNNNNNGC 1 cut(s) 47
NlaIII CATG 2 cut(s) 170, 376
NlaIV GGNNCC 1 cut(s) 51
NmuCI GTSAC 1 cut(s) 34
PctI GAATGC 1 cut(s) 223
PfeI GAWTC 1 cut(s) 151
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
PspN4I GGNNCC 1 cut(s) 51
PspPI GGNCC 1 cut(s) 301
PvuII CAGCTG 1 cut(s) 41
RseI CAYNNNNRTG 1 cut(s) 32
SaqAI TTAA 3 cut(s) 80, 324, 339
Sau96I GGNCC 1 cut(s) 301
SchI GAGTC 1 cut(s) 238
SetI ASST 3 cut(s) 43, 297, 386
SfaNI GCATC 2 cut(s) 114, 366
SinI GGWCC 1 cut(s) 301
SmiMI CAYNNNNRTG 1 cut(s) 32
Sse9I AATT 5 cut(s) 60, 72, 244, 255, 311
TaaI ACNGT 1 cut(s) 17
TaqI TCGA 1 cut(s) 202
TaqII GACCGA 1 cut(s) 318
TasI AATT 5 cut(s) 60, 72, 244, 255, 311
TfiI GAWTC 1 cut(s) 151
Tru1I TTAA 3 cut(s) 80, 324, 339
Tru9I TTAA 3 cut(s) 80, 324, 339
TscAI CASTG 1 cut(s) 370
TseFI GTSAC 1 cut(s) 34
Tsp45I GTSAC 1 cut(s) 34
TspDTI ATGAA 1 cut(s) 296
TspRI CASTG 1 cut(s) 370
VpaK11BI GGWCC 1 cut(s) 301
XapI RAATTY 3 cut(s) 60, 244, 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.