Belongs to the GRAS family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0290711 |
| rosa_laevigata | RLG00000006780 |
| rosa_multiflora | Rmu_sc0000942.1_g000026 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 282 |
| AcuI | CTGAAG | 2 cut(s) | 177, 407 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 82 |
| AgsI | TTSAA | 1 cut(s) | 139 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 91 |
| AjnI | CCWGG | 1 cut(s) | 121 |
| Alw26I | GTCTC | 2 cut(s) | 162, 241 |
| AoxI | GGCC | 1 cut(s) | 360 |
| AsuHPI | GGTGA | 1 cut(s) | 241 |
| AsuII | TTCGAA | 1 cut(s) | 336 |
| BanII | GRGCYC | 1 cut(s) | 68 |
| BbsI | GAAGAC | 2 cut(s) | 87, 384 |
| BbvCI | CCTCAGC | 3 cut(s) | 347, 395, 416 |
| BciT130I | CCWGG | 1 cut(s) | 123 |
| BcoDI | GTCTC | 2 cut(s) | 162, 241 |
| Bme1390I | CCNGG | 1 cut(s) | 123 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 91 |
| BmrFI | CCNGG | 1 cut(s) | 123 |
| BmrI | ACTGGG | 2 cut(s) | 70, 142 |
| BmsI | GCATC | 1 cut(s) | 381 |
| BmuI | ACTGGG | 2 cut(s) | 70, 142 |
| BpiI | GAAGAC | 2 cut(s) | 87, 384 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 74, 106, 291, 323 |
| BpmI | CTGGAG | 1 cut(s) | 389 |
| Bpu10I | CCTNAGC | 3 cut(s) | 347, 395, 416 |
| Bpu14I | TTCGAA | 1 cut(s) | 336 |
| BsaI | GGTCTC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 1 cut(s) | 313 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 82 |
| Bse1I | ACTGG | 2 cut(s) | 76, 148 |
| BseBI | CCWGG | 1 cut(s) | 123 |
| BseDI | CCNNGG | 1 cut(s) | 313 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BseMII | CTCAG | 5 cut(s) | 53, 338, 386, 407, 442 |
| BseNI | ACTGG | 2 cut(s) | 76, 148 |
| BseRI | GAGGAG | 4 cut(s) | 193, 233, 236, 412 |
| BsgI | GTGCAG | 1 cut(s) | 305 |
| BshFI | GGCC | 1 cut(s) | 362 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BsmAI | GTCTC | 2 cut(s) | 162, 241 |
| BsmBI | CGTCTC | 1 cut(s) | 241 |
| BsnI | GGCC | 1 cut(s) | 362 |
| Bso31I | GGTCTC | 1 cut(s) | 162 |
| Bsp119I | TTCGAA | 1 cut(s) | 336 |
| Bsp1286I | GDGCHC | 1 cut(s) | 68 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| BspANI | GGCC | 1 cut(s) | 362 |
| BspCNI | CTCAG | 5 cut(s) | 54, 339, 387, 408, 441 |
| BspT104I | TTCGAA | 1 cut(s) | 336 |
| BspTNI | GGTCTC | 1 cut(s) | 162 |
| BsrI | ACTGG | 2 cut(s) | 76, 148 |
| BssECI | CCNNGG | 1 cut(s) | 313 |
| BssMI | GATC | 1 cut(s) | 3 |
| Bst2UI | CCWGG | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 1 cut(s) | 317 |
| Bst6I | CTCTTC | 1 cut(s) | 196 |
| BstBI | TTCGAA | 1 cut(s) | 336 |
| BstC8I | GCNNGC | 1 cut(s) | 344 |
| BstDEI | CTNAG | 5 cut(s) | 62, 347, 395, 416, 428 |
| BstDSI | CCRYGG | 1 cut(s) | 313 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMAI | GTCTC | 2 cut(s) | 162, 241 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 352, 391 |
| BstNI | CCWGG | 1 cut(s) | 123 |
| BstNSI | RCATGY | 1 cut(s) | 427 |
| BstSCI | CCNGG | 1 cut(s) | 121 |
| BstV2I | GAAGAC | 2 cut(s) | 87, 384 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 46 |
| BsuRI | GGCC | 1 cut(s) | 362 |
| BtgI | CCRYGG | 1 cut(s) | 313 |
| Cac8I | GCNNGC | 1 cut(s) | 344 |
| CviAII | CATG | 3 cut(s) | 40, 46, 424 |
| CviJI | RGCY | 3 cut(s) | 66, 116, 362 |
| CviKI_1 | RGCY | 3 cut(s) | 66, 116, 362 |
| DdeI | CTNAG | 5 cut(s) | 62, 347, 395, 416, 428 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| DriI | GACNNNNNGTC | 1 cut(s) | 91 |
| Eam1104I | CTCTTC | 1 cut(s) | 196 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 91 |
| EarI | CTCTTC | 1 cut(s) | 196 |
| Eco147I | AGGCCT | 1 cut(s) | 362 |
| Eco24I | GRGCYC | 1 cut(s) | 68 |
| Eco31I | GGTCTC | 1 cut(s) | 162 |
| Eco57I | CTGAAG | 2 cut(s) | 177, 407 |
| EcoRII | CCWGG | 1 cut(s) | 121 |
| EcoT38I | GRGCYC | 1 cut(s) | 68 |
| Esp3I | CGTCTC | 1 cut(s) | 241 |
| FaeI | CATG | 3 cut(s) | 43, 49, 427 |
| FaiI | YATR | 5 cut(s) | 41, 47, 119, 255, 425 |
| FatI | CATG | 3 cut(s) | 39, 45, 423 |
| FblI | GTMKAC | 1 cut(s) | 282 |
| FriOI | GRGCYC | 1 cut(s) | 68 |
| GsuI | CTGGAG | 1 cut(s) | 389 |
| HaeIII | GGCC | 1 cut(s) | 362 |
| Hin1II | CATG | 3 cut(s) | 43, 49, 427 |
| HincII | GTYRAC | 2 cut(s) | 261, 283 |
| HindII | GTYRAC | 2 cut(s) | 261, 283 |
| HinfI | GANTC | 6 cut(s) | 155, 180, 257, 284, 300, 306 |
| HphI | GGTGA | 1 cut(s) | 241 |
| Hpy166II | GTNNAC | 3 cut(s) | 261, 283, 313 |
| Hpy188I | TCNGA | 4 cut(s) | 8, 63, 196, 305 |
| Hpy8I | GTNNAC | 3 cut(s) | 261, 283, 313 |
| HpyAV | CCTTC | 3 cut(s) | 229, 332, 400 |
| HpyCH4III | ACNGT | 1 cut(s) | 317 |
| HpyCH4IV | ACGT | 1 cut(s) | 440 |
| HpyCH4V | TGCA | 1 cut(s) | 322 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 352, 391 |
| HpyF3I | CTNAG | 5 cut(s) | 62, 347, 395, 416, 428 |
| HpySE526I | ACGT | 1 cut(s) | 440 |
| Hsp92II | CATG | 3 cut(s) | 43, 49, 427 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LmnI | GCTCC | 1 cut(s) | 352 |
| LpnPI | CCDG | 7 cut(s) | 89, 108, 135, 161, 178, 344, 353 |
| LweI | GCATC | 1 cut(s) | 381 |
| MaeII | ACGT | 1 cut(s) | 440 |
| MaeIII | GTNAC | 1 cut(s) | 431 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MboII | GAAGA | 5 cut(s) | 87, 150, 183, 389, 400 |
| MhlI | GDGCHC | 1 cut(s) | 68 |
| MluCI | AATT | 1 cut(s) | 100 |
| MlyI | GAGTC | 5 cut(s) | 174, 266, 278, 300, 309 |
| MmeI | TCCRAC | 2 cut(s) | 253, 354 |
| MseI | TTAA | 1 cut(s) | 11 |
| MslI | CAYNNNNRTG | 1 cut(s) | 44 |
| MspR9I | CCNGG | 1 cut(s) | 123 |
| MvaI | CCWGG | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 352, 391 |
| NdeII | GATC | 1 cut(s) | 3 |
| NlaIII | CATG | 3 cut(s) | 43, 49, 427 |
| NspI | RCATGY | 1 cut(s) | 427 |
| NspV | TTCGAA | 1 cut(s) | 336 |
| PceI | AGGCCT | 1 cut(s) | 362 |
| PfeI | GAWTC | 1 cut(s) | 155 |
| PleI | GAGTC | 5 cut(s) | 174, 265, 278, 300, 308 |
| PpsI | GAGTC | 5 cut(s) | 174, 265, 278, 300, 308 |
| Psp6I | CCWGG | 1 cut(s) | 121 |
| PspGI | CCWGG | 1 cut(s) | 121 |
| RseI | CAYNNNNRTG | 1 cut(s) | 44 |
| SalI | GTCGAC | 1 cut(s) | 281 |
| SaqAI | TTAA | 1 cut(s) | 11 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| SchI | GAGTC | 5 cut(s) | 174, 266, 278, 300, 309 |
| ScrFI | CCNGG | 1 cut(s) | 123 |
| SduI | GDGCHC | 1 cut(s) | 68 |
| SetI | ASST | 7 cut(s) | 17, 111, 124, 221, 254, 414, 443 |
| SfaNI | GCATC | 1 cut(s) | 381 |
| SfuI | TTCGAA | 1 cut(s) | 336 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 44 |
| Sse9I | AATT | 1 cut(s) | 100 |
| SseBI | AGGCCT | 1 cut(s) | 362 |
| StuI | AGGCCT | 1 cut(s) | 362 |
| StyD4I | CCNGG | 1 cut(s) | 121 |
| TaaI | ACNGT | 1 cut(s) | 317 |
| TaiI | ACGT | 1 cut(s) | 443 |
| TaqI | TCGA | 4 cut(s) | 81, 153, 282, 336 |
| TasI | AATT | 1 cut(s) | 100 |
| TfiI | GAWTC | 1 cut(s) | 155 |
| Tru1I | TTAA | 1 cut(s) | 11 |
| Tru9I | TTAA | 1 cut(s) | 11 |
| TspDTI | ATGAA | 1 cut(s) | 56 |
| TspGWI | ACGGA | 1 cut(s) | 312 |
| XceI | RCATGY | 1 cut(s) | 427 |
| XmiI | GTMKAC | 1 cut(s) | 282 |