RCHIOBHM_MTG0498811

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
Mt
Physical Location & Seq
Forward (+)
179613 .. 179774
162 bp
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UTR
Exon/CDS
Intron
PRQ15639

Sequence Viewer

Length: 162 bp
ATGTATTGCCCCCGATCAGATCCACCAGACAAGAAACTCAATTCCGCACTGCTGCTGAGTCGTCGGACTTATCCACCAAGGGATTCGTGGAATTTCTGTGGATTGCGTTGGAGGAAATCTACCAAAGCTAGGCAGATAGATAGACTCCTTTCCCTCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

53

Amino Acids

6.31

Weight (kDa)

10.3

Isoelectric Point (pI)

62.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019171)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 45
AclWI GGATC 1 cut(s) 14
AcsI RAATTY 1 cut(s) 91
AfiI CCNNNNNNNGG 1 cut(s) 129
AluBI AGCT 1 cut(s) 128
AluI AGCT 1 cut(s) 128
AlwI GGATC 1 cut(s) 14
ApeKI GCWGC 1 cut(s) 52
ApoI RAATTY 1 cut(s) 91
BbvI GCAGC 1 cut(s) 39
BfaI CTAG 1 cut(s) 129
BisI GCNGC 1 cut(s) 53
BlsI GCNGC 1 cut(s) 54
BsaJI CCNNGG 1 cut(s) 77
Bsc4I CCNNNNNNNGG 1 cut(s) 129
BseDI CCNNGG 1 cut(s) 77
BseLI CCNNNNNNNGG 1 cut(s) 129
BseMII CTCAG 1 cut(s) 47
BseXI GCAGC 1 cut(s) 39
BslI CCNNNNNNNGG 1 cut(s) 129
Bsp143I GATC 2 cut(s) 14, 19
BspACI CCGC 1 cut(s) 45
BspCNI CTCAG 1 cut(s) 48
BspPI GGATC 1 cut(s) 14
BssECI CCNNGG 1 cut(s) 77
BssMI GATC 2 cut(s) 14, 19
BssT1I CCWWGG 1 cut(s) 77
BstDEI CTNAG 1 cut(s) 56
BstKTI GATC 2 cut(s) 17, 22
BstMBI GATC 2 cut(s) 14, 19
BstV1I GCAGC 1 cut(s) 39
BstX2I RGATCY 1 cut(s) 19
BstYI RGATCY 1 cut(s) 19
BtsI GCAGTG 1 cut(s) 47
BtsIMutI CAGTG 1 cut(s) 47
CviJI RGCY 1 cut(s) 128
CviKI_1 RGCY 1 cut(s) 128
DdeI CTNAG 1 cut(s) 56
DpnI GATC 2 cut(s) 16, 21
DpnII GATC 2 cut(s) 14, 19
Eco130I CCWWGG 1 cut(s) 77
EcoT14I CCWWGG 1 cut(s) 77
ErhI CCWWGG 1 cut(s) 77
Fnu4HI GCNGC 1 cut(s) 53
Fsp4HI GCNGC 1 cut(s) 53
FspBI CTAG 1 cut(s) 129
GluI GCNGC 1 cut(s) 53
HinfI GANTC 3 cut(s) 58, 83, 144
Hpy188I TCNGA 2 cut(s) 19, 66
Hpy99I CGWCG 1 cut(s) 66
HpyF3I CTNAG 1 cut(s) 56
Kzo9I GATC 2 cut(s) 14, 19
LpnPI CCDG 1 cut(s) 39
Lsp1109I GCAGC 1 cut(s) 39
MaeI CTAG 1 cut(s) 129
MalI GATC 2 cut(s) 16, 21
MboI GATC 2 cut(s) 14, 19
MflI RGATCY 1 cut(s) 19
MluCI AATT 2 cut(s) 40, 91
MlyI GAGTC 2 cut(s) 67, 138
MmeI TCCRAC 2 cut(s) 44, 89
MnlI CCTC 1 cut(s) 105
NdeII GATC 2 cut(s) 14, 19
PfeI GAWTC 1 cut(s) 83
PkrI GCNGC 1 cut(s) 54
PleI GAGTC 2 cut(s) 66, 138
PpsI GAGTC 2 cut(s) 66, 138
PsuI RGATCY 1 cut(s) 19
SatI GCNGC 1 cut(s) 53
Sau3AI GATC 2 cut(s) 14, 19
SchI GAGTC 2 cut(s) 67, 138
SetI ASST 1 cut(s) 130
SgeI CNNG 6 cut(s) 24, 38, 43, 90, 99, 141
Sse9I AATT 2 cut(s) 40, 91
SsiI CCGC 1 cut(s) 45
SspMI CTAG 1 cut(s) 129
StyI CCWWGG 1 cut(s) 77
TasI AATT 2 cut(s) 40, 91
TfiI GAWTC 1 cut(s) 83
TscAI CASTG 1 cut(s) 54
TseI GCWGC 1 cut(s) 52
TspRI CASTG 1 cut(s) 54
XapI RAATTY 1 cut(s) 91
XcmI CCANNNNNNNNNTGG 1 cut(s) 84
XspI CTAG 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.