TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000001234 |
| rosa_roxburghii | Rroxscaffold_3G00226850 |
| rosa_rugosa | Rorug07G0284200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 509 |
| AccI | GTMKAC | 1 cut(s) | 435 |
| AciI | CCGC | 2 cut(s) | 137, 255 |
| AclWI | GGATC | 2 cut(s) | 224, 278 |
| AcsI | RAATTY | 3 cut(s) | 325, 519, 575 |
| AcuI | CTGAAG | 1 cut(s) | 428 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 24 |
| AgsI | TTSAA | 4 cut(s) | 144, 314, 464, 593 |
| AluBI | AGCT | 4 cut(s) | 147, 163, 353, 563 |
| AluI | AGCT | 4 cut(s) | 147, 163, 353, 563 |
| Alw26I | GTCTC | 1 cut(s) | 665 |
| AlwI | GGATC | 2 cut(s) | 224, 278 |
| AoxI | GGCC | 1 cut(s) | 87 |
| ApeKI | GCWGC | 2 cut(s) | 304, 320 |
| ApoI | RAATTY | 3 cut(s) | 325, 519, 575 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 451 |
| AspLEI | GCGC | 2 cut(s) | 169, 510 |
| AspS9I | GGNCC | 1 cut(s) | 87 |
| AsuHPI | GGTGA | 1 cut(s) | 278 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 401, 433 |
| BauI | CACGAG | 2 cut(s) | 12, 456 |
| BbsI | GAAGAC | 1 cut(s) | 112 |
| BbvI | GCAGC | 2 cut(s) | 291, 307 |
| BccI | CCATC | 3 cut(s) | 76, 98, 290 |
| BceAI | ACGGC | 1 cut(s) | 416 |
| BcoDI | GTCTC | 1 cut(s) | 665 |
| BfaI | CTAG | 1 cut(s) | 258 |
| BglII | AGATCT | 1 cut(s) | 105 |
| BisI | GCNGC | 2 cut(s) | 305, 321 |
| BlsI | GCNGC | 2 cut(s) | 306, 322 |
| BmgT120I | GGNCC | 1 cut(s) | 87 |
| BmiI | GGNNCC | 1 cut(s) | 88 |
| BmrI | ACTGGG | 1 cut(s) | 434 |
| BmsI | GCATC | 1 cut(s) | 307 |
| BmuI | ACTGGG | 1 cut(s) | 434 |
| BpiI | GAAGAC | 1 cut(s) | 112 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 291, 323 |
| BsaJI | CCNNGG | 3 cut(s) | 42, 94, 615 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 24 |
| Bse1I | ACTGG | 1 cut(s) | 440 |
| BseDI | CCNNGG | 3 cut(s) | 42, 94, 615 |
| BseGI | GGATG | 2 cut(s) | 90, 542 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 24 |
| BseMII | CTCAG | 3 cut(s) | 93, 256, 368 |
| BseNI | ACTGG | 1 cut(s) | 440 |
| BseRI | GAGGAG | 1 cut(s) | 59 |
| BseXI | GCAGC | 2 cut(s) | 291, 307 |
| BshFI | GGCC | 1 cut(s) | 89 |
| BsiSI | CCGG | 1 cut(s) | 18 |
| BslFI | GGGAC | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 24 |
| BsmAI | GTCTC | 1 cut(s) | 665 |
| BsmFI | GGGAC | 1 cut(s) | 194 |
| BsnI | GGCC | 1 cut(s) | 89 |
| Bsp143I | GATC | 4 cut(s) | 105, 229, 238, 283 |
| BspACI | CCGC | 2 cut(s) | 137, 255 |
| BspANI | GGCC | 1 cut(s) | 89 |
| BspCNI | CTCAG | 3 cut(s) | 94, 255, 367 |
| BspLI | GGNNCC | 1 cut(s) | 88 |
| BspPI | GGATC | 2 cut(s) | 224, 278 |
| BsrI | ACTGG | 1 cut(s) | 440 |
| BssECI | CCNNGG | 3 cut(s) | 42, 94, 615 |
| BssMI | GATC | 4 cut(s) | 105, 229, 238, 283 |
| BssSI | CACGAG | 2 cut(s) | 12, 456 |
| BssT1I | CCWWGG | 2 cut(s) | 94, 615 |
| Bst2BI | CACGAG | 2 cut(s) | 12, 456 |
| Bst4CI | ACNGT | 1 cut(s) | 624 |
| BstC8I | GCNNGC | 1 cut(s) | 165 |
| BstDEI | CTNAG | 3 cut(s) | 102, 242, 354 |
| BstF5I | GGATG | 2 cut(s) | 90, 542 |
| BstHHI | GCGC | 2 cut(s) | 169, 510 |
| BstKTI | GATC | 4 cut(s) | 108, 232, 241, 286 |
| BstMAI | GTCTC | 1 cut(s) | 665 |
| BstMBI | GATC | 4 cut(s) | 105, 229, 238, 283 |
| BstV1I | GCAGC | 2 cut(s) | 291, 307 |
| BstV2I | GAAGAC | 1 cut(s) | 112 |
| BstX2I | RGATCY | 1 cut(s) | 105 |
| BstYI | RGATCY | 1 cut(s) | 105 |
| BsuRI | GGCC | 1 cut(s) | 89 |
| BtsCI | GGATG | 2 cut(s) | 90, 542 |
| Cac8I | GCNNGC | 1 cut(s) | 165 |
| CfoI | GCGC | 2 cut(s) | 169, 510 |
| Cfr13I | GGNCC | 1 cut(s) | 87 |
| CviAII | CATG | 1 cut(s) | 511 |
| CviJI | RGCY | 9 cut(s) | 89, 147, 163, 304, 336, 353, 406, 431, 563 |
| CviKI_1 | RGCY | 9 cut(s) | 89, 147, 163, 304, 336, 353, 406, 431, 563 |
| DdeI | CTNAG | 3 cut(s) | 102, 242, 354 |
| DpnI | GATC | 4 cut(s) | 107, 231, 240, 285 |
| DpnII | GATC | 4 cut(s) | 105, 229, 238, 283 |
| Eco130I | CCWWGG | 2 cut(s) | 94, 615 |
| Eco32I | GATATC | 1 cut(s) | 469 |
| Eco57I | CTGAAG | 1 cut(s) | 428 |
| EcoRV | GATATC | 1 cut(s) | 469 |
| EcoT14I | CCWWGG | 2 cut(s) | 94, 615 |
| ErhI | CCWWGG | 2 cut(s) | 94, 615 |
| FaeI | CATG | 1 cut(s) | 514 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 658 |
| FaqI | GGGAC | 1 cut(s) | 194 |
| FatI | CATG | 1 cut(s) | 510 |
| FauI | CCCGC | 1 cut(s) | 130 |
| FblI | GTMKAC | 1 cut(s) | 435 |
| Fnu4HI | GCNGC | 2 cut(s) | 305, 321 |
| FokI | GGATG | 2 cut(s) | 77, 549 |
| Fsp4HI | GCNGC | 2 cut(s) | 305, 321 |
| FspAI | RTGCGCAY | 1 cut(s) | 509 |
| FspBI | CTAG | 1 cut(s) | 258 |
| FspI | TGCGCA | 1 cut(s) | 509 |
| GlaI | GCGC | 2 cut(s) | 168, 509 |
| GluI | GCNGC | 2 cut(s) | 305, 321 |
| HaeIII | GGCC | 1 cut(s) | 89 |
| HapII | CCGG | 1 cut(s) | 18 |
| HhaI | GCGC | 2 cut(s) | 169, 510 |
| Hin1II | CATG | 1 cut(s) | 514 |
| Hin6I | GCGC | 2 cut(s) | 167, 508 |
| HinP1I | GCGC | 2 cut(s) | 167, 508 |
| HinfI | GANTC | 2 cut(s) | 38, 642 |
| HpaII | CCGG | 1 cut(s) | 18 |
| HphI | GGTGA | 1 cut(s) | 278 |
| Hpy166II | GTNNAC | 1 cut(s) | 436 |
| Hpy188I | TCNGA | 6 cut(s) | 43, 103, 238, 245, 357, 683 |
| Hpy188III | TCNNGA | 2 cut(s) | 155, 346 |
| Hpy8I | GTNNAC | 1 cut(s) | 436 |
| HpyAV | CCTTC | 2 cut(s) | 243, 396 |
| HpyCH4III | ACNGT | 1 cut(s) | 624 |
| HpyCH4IV | ACGT | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 5 cut(s) | 293, 323, 557, 637, 665 |
| HpyF3I | CTNAG | 3 cut(s) | 102, 242, 354 |
| HpySE526I | ACGT | 1 cut(s) | 29 |
| Hsp92II | CATG | 1 cut(s) | 514 |
| HspAI | GCGC | 2 cut(s) | 167, 508 |
| Kzo9I | GATC | 4 cut(s) | 105, 229, 238, 283 |
| LpnPI | CCDG | 7 cut(s) | 31, 133, 149, 318, 322, 331, 453 |
| Lsp1109I | GCAGC | 2 cut(s) | 291, 307 |
| LweI | GCATC | 1 cut(s) | 307 |
| MaeI | CTAG | 1 cut(s) | 258 |
| MaeII | ACGT | 1 cut(s) | 29 |
| MalI | GATC | 4 cut(s) | 107, 231, 240, 285 |
| MboI | GATC | 4 cut(s) | 105, 229, 238, 283 |
| MboII | GAAGA | 4 cut(s) | 112, 326, 421, 476 |
| MflI | RGATCY | 1 cut(s) | 105 |
| MluCI | AATT | 4 cut(s) | 325, 475, 519, 575 |
| MlyI | GAGTC | 1 cut(s) | 651 |
| MmeI | TCCRAC | 3 cut(s) | 424, 469, 496 |
| MnlI | CCTC | 5 cut(s) | 18, 37, 55, 262, 293 |
| MroXI | GAANNNNTTC | 1 cut(s) | 451 |
| MseI | TTAA | 1 cut(s) | 8 |
| MspI | CCGG | 1 cut(s) | 18 |
| NdeII | GATC | 4 cut(s) | 105, 229, 238, 283 |
| NlaIII | CATG | 1 cut(s) | 514 |
| NlaIV | GGNNCC | 1 cut(s) | 88 |
| NsbI | TGCGCA | 1 cut(s) | 509 |
| PdmI | GAANNNNTTC | 1 cut(s) | 451 |
| PfeI | GAWTC | 1 cut(s) | 38 |
| PkrI | GCNGC | 2 cut(s) | 306, 322 |
| PleI | GAGTC | 1 cut(s) | 650 |
| PpsI | GAGTC | 1 cut(s) | 650 |
| PspN4I | GGNNCC | 1 cut(s) | 88 |
| PspPI | GGNCC | 1 cut(s) | 87 |
| PsuI | RGATCY | 1 cut(s) | 105 |
| SaqAI | TTAA | 1 cut(s) | 8 |
| SatI | GCNGC | 2 cut(s) | 305, 321 |
| Sau3AI | GATC | 4 cut(s) | 105, 229, 238, 283 |
| Sau96I | GGNCC | 1 cut(s) | 87 |
| SchI | GAGTC | 1 cut(s) | 651 |
| SetI | ASST | 8 cut(s) | 32, 100, 149, 165, 355, 419, 565, 590 |
| SfaNI | GCATC | 1 cut(s) | 307 |
| Sse9I | AATT | 4 cut(s) | 325, 475, 519, 575 |
| SsiI | CCGC | 2 cut(s) | 137, 255 |
| SspI | AATATT | 1 cut(s) | 216 |
| SspMI | CTAG | 1 cut(s) | 258 |
| StyI | CCWWGG | 2 cut(s) | 94, 615 |
| TaaI | ACNGT | 1 cut(s) | 624 |
| TaiI | ACGT | 1 cut(s) | 32 |
| TasI | AATT | 4 cut(s) | 325, 475, 519, 575 |
| TfiI | GAWTC | 1 cut(s) | 38 |
| Tru1I | TTAA | 1 cut(s) | 8 |
| Tru9I | TTAA | 1 cut(s) | 8 |
| TseI | GCWGC | 2 cut(s) | 304, 320 |
| TspDTI | ATGAA | 1 cut(s) | 266 |
| XapI | RAATTY | 3 cut(s) | 325, 519, 575 |
| XmiI | GTMKAC | 1 cut(s) | 435 |
| XmnI | GAANNNNTTC | 1 cut(s) | 451 |
| XspI | CTAG | 1 cut(s) | 258 |