Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0007135

Physical Location & Seq

Genomic Coordinates Forward (+)

40365972 .. 40376530

Gene Structure 10559 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002824

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGTCGTCTAAAGTTGTCTACGAAGGTTGGATGGTGCGTTACGGCCGGAGGAAGATCGGCCGATCCTTCATTCACATGCGCTATTTCGTCCTCGAGTCTCGCCTTCTCGCTTACTACAAGAGGAAGCCGCAAGATAATCAGGTTCCGATCAAGACGTTGTTAATTGATGGGAATTGTAGAGTGGAGGACCGAGGCTTGAAGACTCACCATGGGCATATGGTATATGTTTTATCTGTTTACAACAAGAAAGATAAGTACCTTCGAATTACGATGGCAGCATTTAACATCCAGGAGGCACTAGTATGGAAGGAAAAAATTGAATATGTCATTGATCAGCATCAAGGTTCACAAGCTGCAAATGGGAACAAATATGTTTCTTTTGAATACAAATCTGGAATGGATAATGGGAGGACGGCTTCCTCATCAGACCGTGAAAGTCAGTTTAGTGCCCAGGAAGATGAAGATGACACTCATCCAAATTTGTTACGAAGAACAACAATTGGAAATGGTCCTCCAGAATCAATATTGGACTGGACACGAGAACTAGACTCGGAGCTGTCTAACCACAGCAACAATAATCAAGCATTTTCCCGGAAGCACTGGCGTCTTCTTCAATGCCAAAACGGACTACGCATTTTCGAAGAGCTTCTTGAAGTAGACTACCTTCCAAGGAGTTGTAGTAGAGCCATGAAAGCTGTAGGAGTGGTTGAGGCTACTTGTGAAGAAATTTTCGAGCTTGTTATGAGCATGGATCAAACACGGTTTGAGTGGGATTGTAGTTTCCAGTATGGTAGCTTAGTTGAGGAAGTAGATGGACATACAGCAGTACTTTATCATAGGCTTCAGCTAGACTGGTTCCCAATGGTTGTGTGGCCCCGTGACCTGTGCTATGTGCGGTATTGGCGTCGAAATGATGATGGGAGCTATGTTGTGTTATTTCGTTCTAGGGAGCATGAGAACTGTGGCCCACAGCCAGGTTATGTGCGGGCACATATTGAAAGTGGGGGATTCAACATTTCCCCTCTAAAACCTCGAAATGGGAGGCCCAGAACTCAGGTGCAGCATCTGATGCAGATTGATCTAAAAGGATGGGGTGTGGGTTATGTATCATCCTTTCAGCAGCATTGTCTCCTTCAGGTGTTAAATAGTGTTGCCGGGCTGCGTGAGTGGTTTTCTCAGACGGATGAAAGGAATGCTCCTCCTAGGATCCCTGTTATGGTCAATATGTCCTCTGCTTCTGTTTCTTCTCGCAAGGGTCAAAAGTTGCTTGATTCTTCCGTTAGTTCTGCAAATAGAAATTCGGTGATGATGGATGAATACTCGGATGAGGATGAAGAATTTCAAATCGCTGAGGCTGAACAAGAGGCATACCAGAATGGGATTCAGAGTGATGTCAAGAGAACAGAAGAAGAACCAGCCGACCAAATTGATTTGTCCTGTTTTTCGGGTAATCTACGGCGTGATAATAATGACAAAGGCCGTGATTGCTGGACAATTTCGGACGGAAACAATTTCAGAGTTCGTAGCAAGCATTTTTGTTATGACAAGACGAAGATTCCTGCAGGAAAACATCTAATGGATCTCGTTGCTGTTGATTGGTTTAAAGATACAAAGAGAATGGACCATGTTGTAAGGCGTCAAGGATGTGCAGCACAAGTTGCCTCAGAAAAAGGTCTTTTCTCTATAGTCTTTAATCTCCAAGTTCCTGGGTCAACGCATTATAGTATGGTATTCTATTTTGTGACGAAGCAATTAGTACCTGGATCTCTCCTGCAACGTTTTGTTGACGGTGATGATGAATTCCGTACTAGTAGACTGAAGCTTATTCCATCAGTTCCTAAGGGTTCATGGATTGTTCGCCAGAGTGTTGGAAGCACCCCTTGTTTGTTGGGAAAAGCTGTTGATTGCAATTACATCCGCGGTCCTAAGTACTTAGAAATTGATGTGGATATTGGTTCCTCTACTGTTGCTAATGGTGTTTTGGGGCTTGTAACTGGTGTAATTACAACATTGGTGGTTGACATGGCTTTTCTTGTACAGGCAAATACTACAGATGAATTGCCAGAGCGGCTAATTGGTGCAGTCCGTGTTTCTCATATAGAACTCAAATCTGCCATAACTCCAAAGTTGGAGGTGGATCCATCTACATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0005886 GO:0008150 GO:0008289 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0010008 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0031090 GO:0031347 GO:0031410 GO:0031982 GO:0031984 GO:0032101 GO:0035091 GO:0042175 GO:0042221 GO:0042493 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0048519 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:0070273 GO:0071944 GO:0080134 GO:0097708 GO:0098588 GO:0098805 GO:0098827 GO:1900055 GO:1900056 GO:1900150 GO:1901700 GO:1901981 GO:1905622 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1336 PH START

Protein Analysis

718

Amino Acids

81.86

Weight (kDa)

6.57

Isoelectric Point (pI)

40.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	225 - 378	1.4e-24	START domain
EDR2_C	PF07059	497 - 701	5e-74	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007135)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19040 AT4G19040 AT4G19040 AT5G45560 AT5G45560
fragaria_vesca	FvH4_5g23810 FvH4_5g23810 FvH4_5g23810 FvH4_5g23810 FvH4_5g23810
malus_domestica	MD06G1014100.v1.1
prunus_persica	Prupe.5G022400_v2.0.a1 Prupe.5G022400_v2.0.a1 Prupe.5G022400_v2.0.a1
pyrus_communis	pycom06g01110
rosa_chinensis	RchiOBHm_Chr7g0213191
rosa_laevigata	RLG00000002824
rosa_multiflora	Rmu_ssc0000084.1_g000013
rosa_roxburghii	Rroxscaffold_3G00246180
rosa_rugosa	Rorug07G0140200
rosa_samantha	Rh7AG271700 Rh7BG267500 Rh7CG291000 Rh7DG279800
rosa_wichuraiana	Rw7G023590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	2068
AccI	GTMKAC	3 cut(s)	18, 657, 1813
AccII	CGCG	1 cut(s)	1920
AciI	CCGC	6 cut(s)	128, 895, 985, 1918, 1920, 2068
AclI	AACGTT	1 cut(s)	1777
AclWI	GGATC	8 cut(s)	57, 759, 1201, 1214, 1587, 1771, 2132, 2145
AcoI	YGGCCR	2 cut(s)	43, 58
AcsI	RAATTY	5 cut(s)	478, 726, 1297, 1337, 1799
AcuI	CTGAAG	3 cut(s)	827, 1118, 1838
AcyI	GRCGYC	3 cut(s)	604, 904, 1636
AfaI	GTAC	6 cut(s)	257, 828, 1758, 1807, 1931, 2037
AfiI	CCNNNNNNNGG	3 cut(s)	974, 1037, 1216
AgsI	TTSAA	8 cut(s)	199, 320, 383, 614, 653, 998, 1012, 1343
AhlI	ACTAGT	2 cut(s)	298, 1808
AjnI	CCWGG	5 cut(s)	288, 450, 973, 1705, 1759
Alw26I	GTCTC	2 cut(s)	102, 1133
AlwI	GGATC	8 cut(s)	57, 759, 1201, 1214, 1587, 1771, 2132, 2145
AlwNI	CAGNNNCTG	1 cut(s)	1066
Ama87I	CYCGRG	1 cut(s)	92
AoxI	GGCC	6 cut(s)	43, 58, 872, 964, 1043, 1477
ApeKI	GCWGC	6 cut(s)	275, 353, 1060, 1120, 1159, 1649
ApoI	RAATTY	5 cut(s)	478, 726, 1297, 1337, 1799
Asp700I	GAANNNNTTC	2 cut(s)	645, 1338
AspA2I	CCTAGG	1 cut(s)	1202
AspLEI	GCGC	1 cut(s)	81
AspS9I	GGNCC	7 cut(s)	187, 509, 873, 965, 1044, 1621, 1922
AsuC2I	CCSGG	2 cut(s)	592, 1156
AsuHPI	GGTGA	3 cut(s)	197, 1315, 1802
AsuII	TTCGAA	2 cut(s)	262, 639
AvaI	CYCGRG	1 cut(s)	92
AvaII	GGWCC	4 cut(s)	187, 509, 1621, 1922
AvrII	CCTAGG	1 cut(s)	1202
AxyI	CCTNAGG	1 cut(s)	1839
BaeGI	GKGCMC	2 cut(s)	451, 991
BamHI	GGATCC	2 cut(s)	1206, 2137
BarI	GAAGNNNNNNTAC	2 cut(s)	648, 680
BauI	CACGAG	1 cut(s)	537
BbsI	GAAGAC	2 cut(s)	206, 599
BbvCI	CCTCAGC	1 cut(s)	1350
BbvI	GCAGC	6 cut(s)	287, 340, 1072, 1132, 1146, 1661
BccI	CCATC	9 cut(s)	25, 161, 265, 806, 911, 1083, 1303, 1837, 2149
BceAI	ACGGC	4 cut(s)	58, 429, 1464, 1472
BciT130I	CCWGG	5 cut(s)	290, 452, 975, 1707, 1761
BclI	TGATCA	1 cut(s)	331
BcnI	CCSGG	2 cut(s)	592, 1156
BcoDI	GTCTC	2 cut(s)	102, 1133
BcuI	ACTAGT	2 cut(s)	298, 1808
BfaI	CTAG	6 cut(s)	299, 545, 848, 945, 1203, 1809
BfmI	CTRYAG	4 cut(s)	696, 1560, 1683, 2049
BglI	GCCNNNNNGGC	1 cut(s)	2068
BisI	GCNGC	8 cut(s)	128, 276, 354, 1061, 1121, 1160, 1650, 2069
BlnI	CCTAGG	1 cut(s)	1202
BlsI	GCNGC	8 cut(s)	129, 277, 355, 1062, 1122, 1161, 1651, 2070
BmcAI	AGTACT	2 cut(s)	828, 1931
Bme1390I	CCNGG	7 cut(s)	290, 452, 592, 975, 1156, 1707, 1761
Bme18I	GGWCC	4 cut(s)	187, 509, 1621, 1922
BmeT110I	CYCGRG	1 cut(s)	92
BmgT120I	GGNCC	7 cut(s)	187, 509, 873, 965, 1044, 1621, 1922
BmiI	GGNNCC	6 cut(s)	144, 857, 875, 1208, 1957, 2139
BmrFI	CCNGG	7 cut(s)	290, 452, 592, 975, 1156, 1707, 1761
BmsI	GCATC	3 cut(s)	346, 1059, 1072
BpiI	GAAGAC	2 cut(s)	206, 599
BpmI	CTGGAG	1 cut(s)	498
Bpu10I	CCTNAGC	1 cut(s)	1350
Bpu14I	TTCGAA	2 cut(s)	262, 639
BpuMI	CCSGG	2 cut(s)	592, 1156
BsaBI	GATNNNNATC	1 cut(s)	336
BsaHI	GRCGYC	3 cut(s)	604, 904, 1636
BsaJI	CCNNGG	7 cut(s)	190, 208, 450, 668, 1202, 1706, 1918
BsaXI	ACNNNNNCTCC	2 cut(s)	664, 694
Bsc4I	CCNNNNNNNGG	3 cut(s)	974, 1037, 1216
Bse1I	ACTGG	5 cut(s)	536, 605, 784, 857, 1999
Bse21I	CCTNAGG	1 cut(s)	1839
Bse8I	GATNNNNATC	1 cut(s)	336
BseBI	CCWGG	5 cut(s)	290, 452, 975, 1707, 1761
BseDI	CCNNGG	7 cut(s)	190, 208, 450, 668, 1202, 1706, 1918
BseJI	GATNNNNATC	1 cut(s)	336
BseLI	CCNNNNNNNGG	3 cut(s)	974, 1037, 1216
BseMII	CTCAG	4 cut(s)	1067, 1190, 1341, 1677
BseNI	ACTGG	5 cut(s)	536, 605, 784, 857, 1999
BseRI	GAGGAG	1 cut(s)	1188
BseSI	GKGCMC	2 cut(s)	451, 991
BseX3I	CGGCCG	2 cut(s)	43, 58
BseXI	GCAGC	6 cut(s)	287, 340, 1072, 1132, 1146, 1661
BsgI	GTGCAG	3 cut(s)	1079, 1668, 2100
Bsh1236I	CGCG	1 cut(s)	1920
Bsh1285I	CGRYCG	2 cut(s)	46, 61
BshFI	GGCC	6 cut(s)	45, 60, 874, 966, 1045, 1479
BsiEI	CGRYCG	2 cut(s)	46, 61
BsiHKCI	CYCGRG	1 cut(s)	92
BsiSI	CCGG	3 cut(s)	46, 592, 1155
BslI	CCNNNNNNNGG	3 cut(s)	974, 1037, 1216
BsmAI	GTCTC	2 cut(s)	102, 1133
BsmI	GAATGC	1 cut(s)	1198
BsnI	GGCC	6 cut(s)	45, 60, 874, 966, 1045, 1479
BsoBI	CYCGRG	1 cut(s)	92
Bsp119I	TTCGAA	2 cut(s)	262, 639
Bsp1286I	GDGCHC	2 cut(s)	451, 991
Bsp1407I	TGTACA	1 cut(s)	2035
Bsp19I	CCATGG	1 cut(s)	208
BspACI	CCGC	6 cut(s)	128, 895, 985, 1918, 1920, 2068
BspANI	GGCC	6 cut(s)	45, 60, 874, 966, 1045, 1479
BspCNI	CTCAG	4 cut(s)	1066, 1189, 1342, 1676
BspFNI	CGCG	1 cut(s)	1920
BspHI	TCATGA	1 cut(s)	2150
BspLI	GGNNCC	6 cut(s)	144, 857, 875, 1208, 1957, 2139
BspMAI	CTGCAG	1 cut(s)	1564
BspPI	GGATC	8 cut(s)	57, 759, 1201, 1214, 1587, 1771, 2132, 2145
BspQI	GCTCTTC	1 cut(s)	636
BspT104I	TTCGAA	2 cut(s)	262, 639
BsrBI	CCGCTC	1 cut(s)	2068
BsrGI	TGTACA	1 cut(s)	2035
BsrI	ACTGG	5 cut(s)	536, 605, 784, 857, 1999
BssECI	CCNNGG	7 cut(s)	190, 208, 450, 668, 1202, 1706, 1918
BssNI	GRCGYC	3 cut(s)	604, 904, 1636
BssSI	CACGAG	1 cut(s)	537
BssT1I	CCWWGG	3 cut(s)	208, 668, 1202
Bst2BI	CACGAG	1 cut(s)	537
Bst2UI	CCWGG	5 cut(s)	290, 452, 975, 1707, 1761
Bst4CI	ACNGT	5 cut(s)	431, 762, 962, 1790, 1966
Bst6I	CTCTTC	1 cut(s)	636
BstACI	GRCGYC	3 cut(s)	604, 904, 1636
BstAPI	GCANNNNNTGC	2 cut(s)	1069, 1658
BstAUI	TGTACA	1 cut(s)	2035
BstBI	TTCGAA	2 cut(s)	262, 639
BstC8I	GCNNGC	2 cut(s)	987, 1529
BstDEI	CTNAG	8 cut(s)	796, 1053, 1176, 1350, 1663, 1839, 1926, 1933
BstDSI	CCRYGG	2 cut(s)	208, 1918
BstFNI	CGCG	1 cut(s)	1920
BstHHI	GCGC	1 cut(s)	81
BstMAI	GTCTC	2 cut(s)	102, 1133
BstMCI	CGRYCG	2 cut(s)	46, 61
BstMWI	GCNNNNNNNGC	6 cut(s)	692, 901, 1069, 1485, 1658, 2068
BstNI	CCWGG	5 cut(s)	290, 452, 975, 1707, 1761
BstNSI	RCATGY	1 cut(s)	79
BstSCI	CCNGG	7 cut(s)	288, 450, 590, 973, 1154, 1705, 1759
BstSFI	CTRYAG	4 cut(s)	696, 1560, 1683, 2049
BstSLI	GKGCMC	2 cut(s)	451, 991
BstUI	CGCG	1 cut(s)	1920
BstV1I	GCAGC	6 cut(s)	287, 340, 1072, 1132, 1146, 1661
BstV2I	GAAGAC	2 cut(s)	206, 599
BstX2I	RGATCY	4 cut(s)	1206, 1579, 1763, 2137
BstXI	CCANNNNNNTGG	2 cut(s)	1706, 1868
BstYI	RGATCY	4 cut(s)	1206, 1579, 1763, 2137
BstZI	CGGCCG	2 cut(s)	43, 58
Bsu36I	CCTNAGG	1 cut(s)	1839
BsuRI	GGCC	6 cut(s)	45, 60, 874, 966, 1045, 1479
BtgI	CCRYGG	2 cut(s)	208, 1918
BtsIMutI	CAGTG	1 cut(s)	598
Cac8I	GCNNGC	2 cut(s)	987, 1529
CaiI	CAGNNNCTG	1 cut(s)	1066
CciI	TCATGA	1 cut(s)	2150
CfoI	GCGC	1 cut(s)	81
Cfr13I	GGNCC	7 cut(s)	187, 509, 873, 965, 1044, 1621, 1922
Cfr42I	CCGCGG	1 cut(s)	1921
CseI	GACGC	3 cut(s)	593, 893, 1625
Csp6I	GTAC	6 cut(s)	256, 827, 1757, 1806, 1930, 2036
CspCI	CAANNNNNGTGG	2 cut(s)	1995, 2030
CviAII	CATG	9 cut(s)	76, 209, 688, 748, 953, 1625, 1848, 2023, 2151
CviQI	GTAC	6 cut(s)	256, 827, 1757, 1806, 1930, 2036
DdeI	CTNAG	8 cut(s)	796, 1053, 1176, 1350, 1663, 1839, 1926, 1933
DraI	TTTAAA	1 cut(s)	1603
EaeI	YGGCCR	2 cut(s)	43, 58
EagI	CGGCCG	2 cut(s)	43, 58
Eam1104I	CTCTTC	1 cut(s)	636
EarI	CTCTTC	1 cut(s)	636
EclXI	CGGCCG	2 cut(s)	43, 58
Eco130I	CCWWGG	3 cut(s)	208, 668, 1202
Eco47I	GGWCC	4 cut(s)	187, 509, 1621, 1922
Eco52I	CGGCCG	2 cut(s)	43, 58
Eco57I	CTGAAG	3 cut(s)	827, 1118, 1838
Eco81I	CCTNAGG	1 cut(s)	1839
Eco88I	CYCGRG	1 cut(s)	92
EcoRI	GAATTC	1 cut(s)	1799
EcoRII	CCWGG	5 cut(s)	288, 450, 973, 1705, 1759
EcoT14I	CCWWGG	3 cut(s)	208, 668, 1202
ErhI	CCWWGG	3 cut(s)	208, 668, 1202
FaeI	CATG	9 cut(s)	79, 212, 691, 751, 956, 1628, 1851, 2026, 2154
FalI	AAGNNNNNCTT	4 cut(s)	633, 665, 1864, 1896
FatI	CATG	9 cut(s)	75, 208, 687, 747, 952, 1624, 1847, 2022, 2150
FauI	CCCGC	1 cut(s)	978
FauNDI	CATATG	1 cut(s)	216
FbaI	TGATCA	1 cut(s)	331
FblI	GTMKAC	3 cut(s)	18, 657, 1813
Fnu4HI	GCNGC	8 cut(s)	128, 276, 354, 1061, 1121, 1160, 1650, 2069
Fsp4HI	GCNGC	8 cut(s)	128, 276, 354, 1061, 1121, 1160, 1650, 2069
FspBI	CTAG	6 cut(s)	299, 545, 848, 945, 1203, 1809
GlaI	GCGC	1 cut(s)	80
GluI	GCNGC	8 cut(s)	128, 276, 354, 1061, 1121, 1160, 1650, 2069
GsuI	CTGGAG	1 cut(s)	498
HaeIII	GGCC	6 cut(s)	45, 60, 874, 966, 1045, 1479
HapII	CCGG	3 cut(s)	46, 592, 1155
HgaI	GACGC	3 cut(s)	593, 893, 1625
HhaI	GCGC	1 cut(s)	81
Hin1I	GRCGYC	3 cut(s)	604, 904, 1636
Hin1II	CATG	9 cut(s)	79, 212, 691, 751, 956, 1628, 1851, 2026, 2154
Hin6I	GCGC	1 cut(s)	79
HinP1I	GCGC	1 cut(s)	79
HincII	GTYRAC	3 cut(s)	1713, 1786, 2020
HindII	GTYRAC	3 cut(s)	1713, 1786, 2020
HindIII	AAGCTT	1 cut(s)	1820
HinfI	GANTC	8 cut(s)	95, 202, 518, 548, 1008, 1271, 1381, 1555
HpaII	CCGG	3 cut(s)	46, 592, 1155
HphI	GGTGA	3 cut(s)	197, 1315, 1802
Hpy166II	GTNNAC	8 cut(s)	19, 238, 347, 658, 1713, 1786, 1814, 2020
Hpy188III	TCNNGA	6 cut(s)	151, 393, 515, 650, 1396, 2151
Hpy8I	GTNNAC	8 cut(s)	19, 238, 347, 658, 1713, 1786, 1814, 2020
Hpy99I	CGWCG	1 cut(s)	909
HpyAV	CCTTC	7 cut(s)	17, 76, 113, 269, 301, 674, 1142
HpyCH4III	ACNGT	5 cut(s)	431, 762, 962, 1790, 1966
HpyCH4IV	ACGT	2 cut(s)	155, 1777
HpyCH4V	TGCA	9 cut(s)	356, 1060, 1072, 1289, 1562, 1649, 1774, 1908, 2081
HpyF10VI	GCNNNNNNNGC	6 cut(s)	692, 901, 1069, 1485, 1658, 2068
HpyF3I	CTNAG	8 cut(s)	796, 1053, 1176, 1350, 1663, 1839, 1926, 1933
HpySE526I	ACGT	2 cut(s)	155, 1777
Hsp92I	GRCGYC	3 cut(s)	604, 904, 1636
Hsp92II	CATG	9 cut(s)	79, 212, 691, 751, 956, 1628, 1851, 2026, 2154
HspAI	GCGC	1 cut(s)	79
Ksp22I	TGATCA	1 cut(s)	331
KspI	CCGCGG	1 cut(s)	1921
LguI	GCTCTTC	1 cut(s)	636
LmnI	GCTCC	4 cut(s)	553, 921, 949, 1201
Lsp1109I	GCAGC	6 cut(s)	287, 340, 1072, 1132, 1146, 1661
LweI	GCATC	3 cut(s)	346, 1059, 1072
MaeI	CTAG	6 cut(s)	299, 545, 848, 945, 1203, 1809
MaeII	ACGT	2 cut(s)	155, 1777
MaeIII	GTNAC	5 cut(s)	38, 483, 878, 1741, 1990
MbiI	CCGCTC	1 cut(s)	2068
MfeI	CAATTG	1 cut(s)	498
MflI	RGATCY	4 cut(s)	1206, 1579, 1763, 2137
MhlI	GDGCHC	2 cut(s)	451, 991
MlyI	GAGTC	3 cut(s)	104, 196, 542
MmeI	TCCRAC	3 cut(s)	8, 1849, 2109
MroXI	GAANNNNTTC	2 cut(s)	645, 1338
MseI	TTAA	5 cut(s)	161, 282, 1142, 1602, 1692
MslI	CAYNNNNRTG	2 cut(s)	74, 301
MspA1I	CMGCKG	1 cut(s)	1920
MspI	CCGG	3 cut(s)	46, 592, 1155
MspR9I	CCNGG	7 cut(s)	290, 452, 592, 975, 1156, 1707, 1761
MunI	CAATTG	1 cut(s)	498
Mva1269I	GAATGC	1 cut(s)	1198
MvaI	CCWGG	5 cut(s)	290, 452, 975, 1707, 1761
MvnI	CGCG	1 cut(s)	1920
MwoI	GCNNNNNNNGC	6 cut(s)	692, 901, 1069, 1485, 1658, 2068
NciI	CCSGG	2 cut(s)	592, 1156
NcoI	CCATGG	1 cut(s)	208
NdeI	CATATG	1 cut(s)	216
NlaIII	CATG	9 cut(s)	79, 212, 691, 751, 956, 1628, 1851, 2026, 2154
NlaIV	GGNNCC	6 cut(s)	144, 857, 875, 1208, 1957, 2139
NmuCI	GTSAC	2 cut(s)	878, 1741
NspI	RCATGY	1 cut(s)	79
NspV	TTCGAA	2 cut(s)	262, 639
PaeR7I	CTCGAG	1 cut(s)	92
PagI	TCATGA	1 cut(s)	2150
PciSI	GCTCTTC	1 cut(s)	636
PctI	GAATGC	1 cut(s)	1198
PdmI	GAANNNNTTC	2 cut(s)	645, 1338
PfeI	GAWTC	5 cut(s)	518, 1008, 1271, 1381, 1555
PfoI	TCCNGGA	2 cut(s)	288, 590
PkrI	GCNGC	8 cut(s)	129, 277, 355, 1062, 1122, 1161, 1651, 2070
PleI	GAGTC	3 cut(s)	103, 196, 542
PpsI	GAGTC	3 cut(s)	103, 196, 542
Psp1406I	AACGTT	1 cut(s)	1777
Psp6I	CCWGG	5 cut(s)	288, 450, 973, 1705, 1759
PspGI	CCWGG	5 cut(s)	288, 450, 973, 1705, 1759
PspN4I	GGNNCC	6 cut(s)	144, 857, 875, 1208, 1957, 2139
PspPI	GGNCC	7 cut(s)	187, 509, 873, 965, 1044, 1621, 1922
PspXI	VCTCGAGB	1 cut(s)	92
PstI	CTGCAG	1 cut(s)	1564
PstNI	CAGNNNCTG	1 cut(s)	1066
PsuI	RGATCY	4 cut(s)	1206, 1579, 1763, 2137
RsaI	GTAC	6 cut(s)	257, 828, 1758, 1807, 1931, 2037
RsaNI	GTAC	6 cut(s)	256, 827, 1757, 1806, 1930, 2036
RseI	CAYNNNNRTG	2 cut(s)	74, 301
SacII	CCGCGG	1 cut(s)	1921
SapI	GCTCTTC	1 cut(s)	636
SaqAI	TTAA	5 cut(s)	161, 282, 1142, 1602, 1692
SatI	GCNGC	8 cut(s)	128, 276, 354, 1061, 1121, 1160, 1650, 2069
Sau96I	GGNCC	7 cut(s)	187, 509, 873, 965, 1044, 1621, 1922
SbfI	CCTGCAGG	1 cut(s)	1564
ScaI	AGTACT	2 cut(s)	828, 1931
SchI	GAGTC	3 cut(s)	104, 196, 542
ScrFI	CCNGG	7 cut(s)	290, 452, 592, 975, 1156, 1707, 1761
SdaI	CCTGCAGG	1 cut(s)	1564
SduI	GDGCHC	2 cut(s)	451, 991
SfaNI	GCATC	3 cut(s)	346, 1059, 1072
SfcI	CTRYAG	4 cut(s)	696, 1560, 1683, 2049
Sfr274I	CTCGAG	1 cut(s)	92
Sfr303I	CCGCGG	1 cut(s)	1921
SfuI	TTCGAA	2 cut(s)	262, 639
SgrBI	CCGCGG	1 cut(s)	1921
SinI	GGWCC	4 cut(s)	187, 509, 1621, 1922
SlaI	CTCGAG	1 cut(s)	92
SmiMI	CAYNNNNRTG	2 cut(s)	74, 301
SmlI	CTYRAG	1 cut(s)	92
SmoI	CTYRAG	1 cut(s)	92
SpeI	ACTAGT	2 cut(s)	298, 1808
Sse8387I	CCTGCAGG	1 cut(s)	1564
SsiI	CCGC	6 cut(s)	128, 895, 985, 1918, 1920, 2068
SspI	AATATT	1 cut(s)	525
SspMI	CTAG	6 cut(s)	299, 545, 848, 945, 1203, 1809
StyD4I	CCNGG	7 cut(s)	288, 450, 590, 973, 1154, 1705, 1759
StyI	CCWWGG	3 cut(s)	208, 668, 1202
TaaI	ACNGT	5 cut(s)	431, 762, 962, 1790, 1966
TaiI	ACGT	2 cut(s)	158, 1780
TaqI	TCGA	6 cut(s)	93, 262, 639, 732, 907, 1033
TaqII	GACCGA	1 cut(s)	204
TatI	WGTACW	3 cut(s)	826, 1929, 2035
TauI	GCSGC	2 cut(s)	130, 2071
TfiI	GAWTC	5 cut(s)	518, 1008, 1271, 1381, 1555
Tru1I	TTAA	5 cut(s)	161, 282, 1142, 1602, 1692
Tru9I	TTAA	5 cut(s)	161, 282, 1142, 1602, 1692
TscAI	CASTG	1 cut(s)	605
TseFI	GTSAC	2 cut(s)	878, 1741
TseI	GCWGC	6 cut(s)	275, 353, 1060, 1120, 1159, 1649
Tsp45I	GTSAC	2 cut(s)	878, 1741
TspDTI	ATGAA	9 cut(s)	58, 474, 704, 1200, 1329, 1347, 1812, 1836, 2070
TspGWI	ACGGA	6 cut(s)	639, 1196, 1267, 1518, 1793, 2075
TspRI	CASTG	1 cut(s)	605
VpaK11BI	GGWCC	4 cut(s)	187, 509, 1621, 1922
XapI	RAATTY	5 cut(s)	478, 726, 1297, 1337, 1799
XceI	RCATGY	1 cut(s)	79
XcmI	CCANNNNNNNNNTGG	1 cut(s)	867
XhoI	CTCGAG	1 cut(s)	92
XmaJI	CCTAGG	1 cut(s)	1202
XmiI	GTMKAC	3 cut(s)	18, 657, 1813
XmnI	GAANNNNTTC	2 cut(s)	645, 1338
XspI	CTAG	6 cut(s)	299, 545, 848, 945, 1203, 1809
ZrmI	AGTACT	2 cut(s)	828, 1931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.