Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000084.1

Orthogroup ID

OG0007135

Physical Location & Seq

Genomic Coordinates Reverse (-)

43261 .. 55451

Gene Structure 12191 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000084.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

atgtcgtctaaagttgtctacgaaggttggatggtgcgttacggccggaggaagatcggccgatccttcattcacatgcgctatttcgtcctcgagtctcgccttctcgcttactacaagaggaagccgcaagttaatcagtcgtacaacccaacgcccaaaaggaccgcactatcttttcaaaatttagcgaaagcttttcacggcgccaaagccacccaacacccccccttggctgtcgtcagattcctccacgtggcgcactcctcccgaggcacactaaactctctcaccttacgtgggatctcccactttcggccgtcacaaatccctccctcaacttcgctgtcgtcacttaggggtctctgcgccgagtggtcttgctggaaggaagcggagatttcgatccgagcttccgagtcggtgagacttcgcgtttcgatttccggctcggattgcactcgattcgaaacgatgtcgtctaaagttgtctacgaaggttggatggtgcgttacggccggaggaagatcggccgatccttcattcacatgcgctatttcgtcctcgagtctcgccttctcgcttactacaagaggaagccgcaagttaatcaggttccgatcaagacgttgttaattgatgggaattgtagagtggaggaccgaggcttgaagactcaccatgggcatatggtatatgttttatctgtttacaacaagaaagataagtaccttcgaattacgatggcagcatttaacatccaggaggcactagtatggaaggaaaaaattgaatatgtcattgatcagcatcaaggttcacaagctgcaaatgggaacaaatatgtttcttttgaatacaaatctggaatggataatgggaggacggcttcctcctcagaccgtgaaagtcagtttagtgcccaggaagatgaagatgacactcatccaaatttgttacgaagaacaacaattggaaatggtcctccagaatcaatatttgactggacaagagaactagactcggagctgtctaaccagagcaacaataatcaggcattttcccggaagcactggcgtcttcttcaatgccaaaatggactacgcattttcgaagagcttcttgaagtagactaccttccaaggagttgtagtagagccatgaaagctgtaggagtggttgaggctacttgtgaagaaattttcgagcttgttatgagcatggatcaaacacggtttgagtgggattgtagtttccagtatggtagcttagttgaggaagtagatggacatacagcagtactttatcataggcttcagctagactggttcccaatggttgtgtggccccgtgacctgtgctatgtgcggtattggcgtcgaaatgatgatgggagctatgttgtgttatttcgttctagggagcatgagaactgtggcccacagccaggttatgtgcgggcacatattgaaagtgggggattcaacatttcccctctaaaatctcgaaatgggaggcccagaactcaggtgcagcatctgatgcagattgatctaaaaggatggggtgtgggttatgtatcatcctttcagcagcattgtctccttcaggtgttaaatagtgttgccgggctgcgtgagtggttttctcagacggatgaaaggaatgctcctcctaggatccctgttatggtcaatatgtcctcagcttctgtttcttctcgcaagggtcaaaagttgcttgattcttctgttagttctgcaaatagaaattcggtgatgatggatgaatactcagatgaggatgaagaatttcaaatcgctgaggctgaacaagaggcataccagaatgggattcagagtgatgtcaagagaacagccgtagaagaagaaccagccgaccaaattgatttgtcctgtttttcgggtaatttacggcgtgataataatgacaaaggccgtgattgctggacaatttcggacggaaacaacttcagagttcgtagcaagcatttttgttatgacaagacgaagattcctgcaggaaaacatctaatggatctcgttgctgttgattggtttaaagacacaaagagaatggaccatgttgtaaggcgtcaaggatgtgcagcacaagttgcctcagaaaaaggtcttttctctatagtcttcaatctccaagttcctgggtcaacacattatagtatggtattctattttgtgacaaagcaattagtacctggatctctcctgcaacgttttgttgacggtgatgatgaattccgtactagcagactgaagcttattccttcagttcctaagggttcatggattgttcgccagagtgttggaagcaccccttgtttgttgggaaaagctgttgattgcaattacatccgcggtcctaagtacttagaaattgatgtggatattggttcctctactgttgctaatggtgttttggggcttgtaactggtgtaattacaacattggtggttgacatggcttttcttgtacaggcaaatactacagatgaattgccagagcggctaattggtgcagtccgtgtttctcatatagaactcaaatctgccgtaactccaaagctggaggcggatccatctacatcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0005886 GO:0008150 GO:0008289 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0010008 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0031090 GO:0031347 GO:0031410 GO:0031982 GO:0031984 GO:0032101 GO:0035091 GO:0042175 GO:0042221 GO:0042493 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0048519 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:0070273 GO:0071944 GO:0080134 GO:0097708 GO:0098588 GO:0098805 GO:0098827 GO:1900055 GO:1900056 GO:1900150 GO:1901700 GO:1901981 GO:1905622 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1336 PH START

Protein Analysis

877

Amino Acids

99.98

Weight (kDa)

8.9

Isoelectric Point (pI)

41.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007135)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19040 AT4G19040 AT4G19040 AT5G45560 AT5G45560
fragaria_vesca	FvH4_5g23810 FvH4_5g23810 FvH4_5g23810 FvH4_5g23810 FvH4_5g23810
malus_domestica	MD06G1014100.v1.1
prunus_persica	Prupe.5G022400_v2.0.a1 Prupe.5G022400_v2.0.a1 Prupe.5G022400_v2.0.a1
pyrus_communis	pycom06g01110
rosa_chinensis	RchiOBHm_Chr7g0213191
rosa_laevigata	RLG00000002824
rosa_multiflora	Rmu_ssc0000084.1_g000013
rosa_roxburghii	Rroxscaffold_3G00246180
rosa_rugosa	Rorug07G0140200
rosa_samantha	Rh7AG271700 Rh7BG267500 Rh7CG291000 Rh7DG279800
rosa_wichuraiana	Rw7G023590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	206
AccBSI	CCGCTC	1 cut(s)	2548
AccI	GTMKAC	3 cut(s)	18, 492, 1131
AccII	CGCG	2 cut(s)	435, 2400
AclI	AACGTT	1 cut(s)	2257
AcoI	YGGCCR	5 cut(s)	43, 58, 317, 517, 532
AcsI	RAATTY	6 cut(s)	184, 952, 1200, 1771, 1811, 2279
AcuI	CTGAAG	5 cut(s)	1301, 1592, 1978, 2295, 2318
AcvI	CACGTG	1 cut(s)	256
AcyI	GRCGYC	4 cut(s)	207, 1078, 1378, 2116
AfaI	GTAC	7 cut(s)	146, 731, 1302, 2238, 2287, 2411, 2517
AfiI	CCNNNNNNNGG	6 cut(s)	232, 256, 300, 315, 1448, 1690
AhlI	ACTAGT	1 cut(s)	772
AjnI	CCWGG	5 cut(s)	762, 924, 1447, 2185, 2239
Alw26I	GTCTC	5 cut(s)	102, 368, 421, 576, 1607
AlwNI	CAGNNNCTG	2 cut(s)	1540, 1712
Ama87I	CYCGRG	3 cut(s)	92, 270, 566
AoxI	GGCC	9 cut(s)	43, 58, 317, 517, 532, 1346, 1438, 1517, 1957
ApeKI	GCWGC	6 cut(s)	749, 827, 1534, 1594, 1633, 2129
ApoI	RAATTY	6 cut(s)	184, 952, 1200, 1771, 1811, 2279
Asp700I	GAANNNNTTC	2 cut(s)	1119, 1812
AspA2I	CCTAGG	1 cut(s)	1676
AspLEI	GCGC	5 cut(s)	81, 209, 262, 371, 555
AspS9I	GGNCC	8 cut(s)	165, 661, 983, 1347, 1439, 1518, 2101, 2402
AsuC2I	CCSGG	2 cut(s)	1066, 1630
AsuHPI	GGTGA	5 cut(s)	283, 436, 671, 1789, 2282
AsuII	TTCGAA	3 cut(s)	468, 736, 1113
AvaI	CYCGRG	3 cut(s)	92, 270, 566
AvaII	GGWCC	5 cut(s)	165, 661, 983, 2101, 2402
AvrII	CCTAGG	1 cut(s)	1676
AxyI	CCTNAGG	1 cut(s)	2319
BaeGI	GKGCMC	2 cut(s)	925, 1465
BamHI	GGATCC	2 cut(s)	1680, 2617
BanI	GGYRCC	1 cut(s)	206
BarI	GAAGNNNNNNTAC	2 cut(s)	1122, 1154
BbrPI	CACGTG	1 cut(s)	256
BbsI	GAAGAC	3 cut(s)	680, 1073, 2161
BbvCI	CCTCAGC	2 cut(s)	1705, 1824
BbvI	GCAGC	6 cut(s)	761, 814, 1546, 1606, 1620, 2141
BccI	CCATC	9 cut(s)	25, 499, 635, 739, 1280, 1385, 1557, 1777, 2629
BceAI	ACGGC	9 cut(s)	58, 220, 304, 532, 903, 1865, 1944, 1952, 2579
BcgI	CGANNNNNNTGC	2 cut(s)	448, 482
BciT130I	CCWGG	5 cut(s)	764, 926, 1449, 2187, 2241
BclI	TGATCA	1 cut(s)	805
BcnI	CCSGG	2 cut(s)	1066, 1630
BcoDI	GTCTC	5 cut(s)	102, 368, 421, 576, 1607
BcuI	ACTAGT	1 cut(s)	772
BfaI	CTAG	6 cut(s)	773, 1019, 1322, 1419, 1677, 2289
BfmI	CTRYAG	4 cut(s)	1170, 2040, 2163, 2529
BfoI	RGCGCY	1 cut(s)	210
BglI	GCCNNNNNGGC	1 cut(s)	2548
BisI	GCNGC	9 cut(s)	128, 602, 750, 828, 1535, 1595, 1634, 2130, 2549
BlnI	CCTAGG	1 cut(s)	1676
BlsI	GCNGC	9 cut(s)	129, 603, 751, 829, 1536, 1596, 1635, 2131, 2550
BmcAI	AGTACT	2 cut(s)	1302, 2411
Bme1390I	CCNGG	7 cut(s)	764, 926, 1066, 1449, 1630, 2187, 2241
Bme18I	GGWCC	5 cut(s)	165, 661, 983, 2101, 2402
BmeT110I	CYCGRG	3 cut(s)	92, 270, 566
BmgT120I	GGNCC	8 cut(s)	165, 661, 983, 1347, 1439, 1518, 2101, 2402
BmiI	GGNNCC	7 cut(s)	208, 618, 1331, 1349, 1682, 2437, 2619
BmrFI	CCNGG	7 cut(s)	764, 926, 1066, 1449, 1630, 2187, 2241
BmsI	GCATC	3 cut(s)	820, 1533, 1546
BpiI	GAAGAC	3 cut(s)	680, 1073, 2161
BpmI	CTGGAG	2 cut(s)	972, 2630
Bpu10I	CCTNAGC	2 cut(s)	1705, 1824
Bpu14I	TTCGAA	3 cut(s)	468, 736, 1113
BpuMI	CCSGG	2 cut(s)	1066, 1630
BsaAI	YACGTR	2 cut(s)	256, 299
BsaBI	GATNNNNATC	2 cut(s)	404, 810
BsaHI	GRCGYC	4 cut(s)	207, 1078, 1378, 2116
BsaI	GGTCTC	1 cut(s)	368
BsaJI	CCNNGG	9 cut(s)	231, 271, 664, 682, 924, 1142, 1676, 2186, 2398
BsaXI	ACNNNNNCTCC	2 cut(s)	1138, 1168
Bsc4I	CCNNNNNNNGG	6 cut(s)	232, 256, 300, 315, 1448, 1690
Bse1I	ACTGG	5 cut(s)	1010, 1079, 1258, 1331, 2479
Bse21I	CCTNAGG	1 cut(s)	2319
Bse8I	GATNNNNATC	2 cut(s)	404, 810
BseBI	CCWGG	5 cut(s)	764, 926, 1449, 2187, 2241
BseDI	CCNNGG	9 cut(s)	231, 271, 664, 682, 924, 1142, 1676, 2186, 2398
BseJI	GATNNNNATC	2 cut(s)	404, 810
BseLI	CCNNNNNNNGG	6 cut(s)	232, 256, 300, 315, 1448, 1690
BseMII	CTCAG	7 cut(s)	912, 1541, 1664, 1719, 1809, 1815, 2157
BseNI	ACTGG	5 cut(s)	1010, 1079, 1258, 1331, 2479
BseRI	GAGGAG	3 cut(s)	256, 886, 1662
BseSI	GKGCMC	2 cut(s)	925, 1465
BseX3I	CGGCCG	5 cut(s)	43, 58, 317, 517, 532
BseXI	GCAGC	6 cut(s)	761, 814, 1546, 1606, 1620, 2141
BsgI	GTGCAG	3 cut(s)	1553, 2148, 2580
Bsh1236I	CGCG	2 cut(s)	435, 2400
Bsh1285I	CGRYCG	5 cut(s)	46, 61, 320, 520, 535
BshFI	GGCC	9 cut(s)	45, 60, 319, 519, 534, 1348, 1440, 1519, 1959
BshNI	GGYRCC	1 cut(s)	206
BsiEI	CGRYCG	5 cut(s)	46, 61, 320, 520, 535
BsiHKCI	CYCGRG	3 cut(s)	92, 270, 566
BsiSI	CCGG	5 cut(s)	46, 447, 520, 1066, 1629
BslI	CCNNNNNNNGG	6 cut(s)	232, 256, 300, 315, 1448, 1690
BsmAI	GTCTC	5 cut(s)	102, 368, 421, 576, 1607
BsmI	GAATGC	1 cut(s)	1672
BsnI	GGCC	9 cut(s)	45, 60, 319, 519, 534, 1348, 1440, 1519, 1959
Bso31I	GGTCTC	1 cut(s)	368
BsoBI	CYCGRG	3 cut(s)	92, 270, 566
Bsp119I	TTCGAA	3 cut(s)	468, 736, 1113
Bsp1286I	GDGCHC	2 cut(s)	925, 1465
Bsp1407I	TGTACA	1 cut(s)	2515
Bsp19I	CCATGG	1 cut(s)	682
BspANI	GGCC	9 cut(s)	45, 60, 319, 519, 534, 1348, 1440, 1519, 1959
BspCNI	CTCAG	7 cut(s)	911, 1540, 1663, 1718, 1808, 1816, 2156
BspFNI	CGCG	2 cut(s)	435, 2400
BspHI	TCATGA	1 cut(s)	2630
BspLI	GGNNCC	7 cut(s)	208, 618, 1331, 1349, 1682, 2437, 2619
BspMAI	CTGCAG	1 cut(s)	2044
BspQI	GCTCTTC	1 cut(s)	1110
BspT104I	TTCGAA	3 cut(s)	468, 736, 1113
BspT107I	GGYRCC	1 cut(s)	206
BspTNI	GGTCTC	1 cut(s)	368
BsrBI	CCGCTC	1 cut(s)	2548
BsrGI	TGTACA	1 cut(s)	2515
BsrI	ACTGG	5 cut(s)	1010, 1079, 1258, 1331, 2479
BssECI	CCNNGG	9 cut(s)	231, 271, 664, 682, 924, 1142, 1676, 2186, 2398
BssNI	GRCGYC	4 cut(s)	207, 1078, 1378, 2116
BssT1I	CCWWGG	4 cut(s)	231, 682, 1142, 1676
Bst2UI	CCWGG	5 cut(s)	764, 926, 1449, 2187, 2241
Bst4CI	ACNGT	5 cut(s)	905, 1236, 1436, 2270, 2446
Bst6I	CTCTTC	1 cut(s)	1110
BstACI	GRCGYC	4 cut(s)	207, 1078, 1378, 2116
BstAPI	GCANNNNNTGC	2 cut(s)	1543, 2138
BstAUI	TGTACA	1 cut(s)	2515
BstBAI	YACGTR	2 cut(s)	256, 299
BstBI	TTCGAA	3 cut(s)	468, 736, 1113
BstC8I	GCNNGC	2 cut(s)	1461, 2009
BstDSI	CCRYGG	2 cut(s)	682, 2398
BstFNI	CGCG	2 cut(s)	435, 2400
BstH2I	RGCGCY	1 cut(s)	210
BstHHI	GCGC	5 cut(s)	81, 209, 262, 371, 555
BstMAI	GTCTC	5 cut(s)	102, 368, 421, 576, 1607
BstMCI	CGRYCG	5 cut(s)	46, 61, 320, 520, 535
BstMWI	GCNNNNNNNGC	7 cut(s)	456, 1166, 1375, 1543, 1965, 2138, 2548
BstNI	CCWGG	5 cut(s)	764, 926, 1449, 2187, 2241
BstNSI	RCATGY	2 cut(s)	79, 553
BstSCI	CCNGG	7 cut(s)	762, 924, 1064, 1447, 1628, 2185, 2239
BstSFI	CTRYAG	4 cut(s)	1170, 2040, 2163, 2529
BstSLI	GKGCMC	2 cut(s)	925, 1465
BstUI	CGCG	2 cut(s)	435, 2400
BstV1I	GCAGC	6 cut(s)	761, 814, 1546, 1606, 1620, 2141
BstV2I	GAAGAC	3 cut(s)	680, 1073, 2161
BstX2I	RGATCY	5 cut(s)	303, 1680, 2059, 2243, 2617
BstXI	CCANNNNNNTGG	2 cut(s)	2186, 2348
BstYI	RGATCY	5 cut(s)	303, 1680, 2059, 2243, 2617
BstZI	CGGCCG	5 cut(s)	43, 58, 317, 517, 532
Bsu36I	CCTNAGG	1 cut(s)	2319
BsuRI	GGCC	9 cut(s)	45, 60, 319, 519, 534, 1348, 1440, 1519, 1959
BtgI	CCRYGG	2 cut(s)	682, 2398
BtsIMutI	CAGTG	1 cut(s)	1072
Cac8I	GCNNGC	2 cut(s)	1461, 2009
CaiI	CAGNNNCTG	2 cut(s)	1540, 1712
CciI	TCATGA	1 cut(s)	2630
CfoI	GCGC	5 cut(s)	81, 209, 262, 371, 555
Cfr13I	GGNCC	8 cut(s)	165, 661, 983, 1347, 1439, 1518, 2101, 2402
Cfr42I	CCGCGG	1 cut(s)	2401
CseI	GACGC	3 cut(s)	1067, 1367, 2105
Csp6I	GTAC	7 cut(s)	145, 730, 1301, 2237, 2286, 2410, 2516
CspCI	CAANNNNNGTGG	2 cut(s)	2475, 2510
CviQI	GTAC	7 cut(s)	145, 730, 1301, 2237, 2286, 2410, 2516
DinI	GGCGCC	1 cut(s)	208
DraI	TTTAAA	1 cut(s)	2083
EaeI	YGGCCR	5 cut(s)	43, 58, 317, 517, 532
EagI	CGGCCG	5 cut(s)	43, 58, 317, 517, 532
Eam1104I	CTCTTC	1 cut(s)	1110
EarI	CTCTTC	1 cut(s)	1110
EciI	GGCGGA	1 cut(s)	2630
EclXI	CGGCCG	5 cut(s)	43, 58, 317, 517, 532
Eco130I	CCWWGG	4 cut(s)	231, 682, 1142, 1676
Eco31I	GGTCTC	1 cut(s)	368
Eco47I	GGWCC	5 cut(s)	165, 661, 983, 2101, 2402
Eco52I	CGGCCG	5 cut(s)	43, 58, 317, 517, 532
Eco57I	CTGAAG	5 cut(s)	1301, 1592, 1978, 2295, 2318
Eco72I	CACGTG	1 cut(s)	256
Eco81I	CCTNAGG	1 cut(s)	2319
Eco88I	CYCGRG	3 cut(s)	92, 270, 566
EcoRI	GAATTC	1 cut(s)	2279
EcoRII	CCWGG	5 cut(s)	762, 924, 1447, 2185, 2239
EcoT14I	CCWWGG	4 cut(s)	231, 682, 1142, 1676
EgeI	GGCGCC	1 cut(s)	208
EheI	GGCGCC	1 cut(s)	208
ErhI	CCWWGG	4 cut(s)	231, 682, 1142, 1676
FalI	AAGNNNNNCTT	4 cut(s)	1107, 1139, 2344, 2376
FauI	CCCGC	1 cut(s)	1452
FauNDI	CATATG	1 cut(s)	690
FbaI	TGATCA	1 cut(s)	805
FblI	GTMKAC	3 cut(s)	18, 492, 1131
Fnu4HI	GCNGC	9 cut(s)	128, 602, 750, 828, 1535, 1595, 1634, 2130, 2549
Fsp4HI	GCNGC	9 cut(s)	128, 602, 750, 828, 1535, 1595, 1634, 2130, 2549
FspBI	CTAG	6 cut(s)	773, 1019, 1322, 1419, 1677, 2289
GlaI	GCGC	5 cut(s)	80, 208, 261, 370, 554
GluI	GCNGC	9 cut(s)	128, 602, 750, 828, 1535, 1595, 1634, 2130, 2549
GsuI	CTGGAG	2 cut(s)	972, 2630
HaeII	RGCGCY	1 cut(s)	210
HaeIII	GGCC	9 cut(s)	45, 60, 319, 519, 534, 1348, 1440, 1519, 1959
HapII	CCGG	5 cut(s)	46, 447, 520, 1066, 1629
HgaI	GACGC	3 cut(s)	1067, 1367, 2105
HhaI	GCGC	5 cut(s)	81, 209, 262, 371, 555
Hin1I	GRCGYC	4 cut(s)	207, 1078, 1378, 2116
Hin6I	GCGC	5 cut(s)	79, 207, 260, 369, 553
HinP1I	GCGC	5 cut(s)	79, 207, 260, 369, 553
HincII	GTYRAC	3 cut(s)	2193, 2266, 2500
HindII	GTYRAC	3 cut(s)	2193, 2266, 2500
HindIII	AAGCTT	2 cut(s)	195, 2300
HpaII	CCGG	5 cut(s)	46, 447, 520, 1066, 1629
HphI	GGTGA	5 cut(s)	283, 436, 671, 1789, 2282
Hpy166II	GTNNAC	8 cut(s)	19, 493, 712, 821, 1132, 2193, 2266, 2500
Hpy188III	TCNNGA	8 cut(s)	270, 625, 867, 989, 1124, 1506, 1870, 2631
Hpy8I	GTNNAC	8 cut(s)	19, 493, 712, 821, 1132, 2193, 2266, 2500
Hpy99I	CGWCG	1 cut(s)	1383
HpyCH4III	ACNGT	5 cut(s)	905, 1236, 1436, 2270, 2446
HpyCH4IV	ACGT	4 cut(s)	255, 298, 629, 2257
HpyF10VI	GCNNNNNNNGC	7 cut(s)	456, 1166, 1375, 1543, 1965, 2138, 2548
HpySE526I	ACGT	4 cut(s)	255, 298, 629, 2257
Hsp92I	GRCGYC	4 cut(s)	207, 1078, 1378, 2116
HspAI	GCGC	5 cut(s)	79, 207, 260, 369, 553
KasI	GGCGCC	1 cut(s)	206
Ksp22I	TGATCA	1 cut(s)	805
KspI	CCGCGG	1 cut(s)	2401
LguI	GCTCTTC	1 cut(s)	1110
LmnI	GCTCC	4 cut(s)	1027, 1395, 1423, 1675
Lsp1109I	GCAGC	6 cut(s)	761, 814, 1546, 1606, 1620, 2141
LweI	GCATC	3 cut(s)	820, 1533, 1546
MaeI	CTAG	6 cut(s)	773, 1019, 1322, 1419, 1677, 2289
MaeII	ACGT	4 cut(s)	255, 298, 629, 2257
MaeIII	GTNAC	9 cut(s)	38, 321, 351, 512, 957, 1352, 2221, 2470, 2596
MbiI	CCGCTC	1 cut(s)	2548
MfeI	CAATTG	1 cut(s)	972
MflI	RGATCY	5 cut(s)	303, 1680, 2059, 2243, 2617
MhlI	GDGCHC	2 cut(s)	925, 1465
Mly113I	GGCGCC	1 cut(s)	207
MlyI	GAGTC	5 cut(s)	104, 428, 578, 670, 1016
MmeI	TCCRAC	3 cut(s)	8, 482, 2329
MroXI	GAANNNNTTC	2 cut(s)	1119, 1812
MseI	TTAA	6 cut(s)	135, 609, 635, 756, 1616, 2082
MslI	CAYNNNNRTG	3 cut(s)	74, 548, 775
MspA1I	CMGCKG	1 cut(s)	2400
MspI	CCGG	5 cut(s)	46, 447, 520, 1066, 1629
MspR9I	CCNGG	7 cut(s)	764, 926, 1066, 1449, 1630, 2187, 2241
MunI	CAATTG	1 cut(s)	972
Mva1269I	GAATGC	1 cut(s)	1672
MvaI	CCWGG	5 cut(s)	764, 926, 1449, 2187, 2241
MvnI	CGCG	2 cut(s)	435, 2400
MwoI	GCNNNNNNNGC	7 cut(s)	456, 1166, 1375, 1543, 1965, 2138, 2548
NarI	GGCGCC	1 cut(s)	207
NciI	CCSGG	2 cut(s)	1066, 1630
NcoI	CCATGG	1 cut(s)	682
NdeI	CATATG	1 cut(s)	690
NlaIV	GGNNCC	7 cut(s)	208, 618, 1331, 1349, 1682, 2437, 2619
NmeAIII	GCCGAG	1 cut(s)	397
NmuCI	GTSAC	4 cut(s)	321, 351, 1352, 2221
NspI	RCATGY	2 cut(s)	79, 553
NspV	TTCGAA	3 cut(s)	468, 736, 1113
PaeR7I	CTCGAG	2 cut(s)	92, 566
PagI	TCATGA	1 cut(s)	2630
PciSI	GCTCTTC	1 cut(s)	1110
PctI	GAATGC	1 cut(s)	1672
PdmI	GAANNNNTTC	2 cut(s)	1119, 1812
PfeI	GAWTC	7 cut(s)	246, 465, 992, 1482, 1745, 1855, 2035
PfoI	TCCNGGA	2 cut(s)	762, 1064
PkrI	GCNGC	9 cut(s)	129, 603, 751, 829, 1536, 1596, 1635, 2131, 2550
PleI	GAGTC	5 cut(s)	103, 427, 577, 670, 1016
PluTI	GGCGCC	1 cut(s)	210
PmaCI	CACGTG	1 cut(s)	256
PmlI	CACGTG	1 cut(s)	256
PpsI	GAGTC	5 cut(s)	103, 427, 577, 670, 1016
Ppu21I	YACGTR	2 cut(s)	256, 299
Psp1406I	AACGTT	1 cut(s)	2257
Psp6I	CCWGG	5 cut(s)	762, 924, 1447, 2185, 2239
PspCI	CACGTG	1 cut(s)	256
PspGI	CCWGG	5 cut(s)	762, 924, 1447, 2185, 2239
PspN4I	GGNNCC	7 cut(s)	208, 618, 1331, 1349, 1682, 2437, 2619
PspPI	GGNCC	8 cut(s)	165, 661, 983, 1347, 1439, 1518, 2101, 2402
PspXI	VCTCGAGB	2 cut(s)	92, 566
PstI	CTGCAG	1 cut(s)	2044
PstNI	CAGNNNCTG	2 cut(s)	1540, 1712
PsuI	RGATCY	5 cut(s)	303, 1680, 2059, 2243, 2617
RsaI	GTAC	7 cut(s)	146, 731, 1302, 2238, 2287, 2411, 2517
RsaNI	GTAC	7 cut(s)	145, 730, 1301, 2237, 2286, 2410, 2516
RseI	CAYNNNNRTG	3 cut(s)	74, 548, 775
SacII	CCGCGG	1 cut(s)	2401
SapI	GCTCTTC	1 cut(s)	1110
SaqAI	TTAA	6 cut(s)	135, 609, 635, 756, 1616, 2082
SatI	GCNGC	9 cut(s)	128, 602, 750, 828, 1535, 1595, 1634, 2130, 2549
Sau96I	GGNCC	8 cut(s)	165, 661, 983, 1347, 1439, 1518, 2101, 2402
SbfI	CCTGCAGG	1 cut(s)	2044
ScaI	AGTACT	2 cut(s)	1302, 2411
SchI	GAGTC	5 cut(s)	104, 428, 578, 670, 1016
ScrFI	CCNGG	7 cut(s)	764, 926, 1066, 1449, 1630, 2187, 2241
SdaI	CCTGCAGG	1 cut(s)	2044
SduI	GDGCHC	2 cut(s)	925, 1465
SfaNI	GCATC	3 cut(s)	820, 1533, 1546
SfcI	CTRYAG	4 cut(s)	1170, 2040, 2163, 2529
SfoI	GGCGCC	1 cut(s)	208
Sfr274I	CTCGAG	2 cut(s)	92, 566
Sfr303I	CCGCGG	1 cut(s)	2401
SfuI	TTCGAA	3 cut(s)	468, 736, 1113
SgrBI	CCGCGG	1 cut(s)	2401
SinI	GGWCC	5 cut(s)	165, 661, 983, 2101, 2402
SlaI	CTCGAG	2 cut(s)	92, 566
SmiMI	CAYNNNNRTG	3 cut(s)	74, 548, 775
SmlI	CTYRAG	2 cut(s)	92, 566
SmoI	CTYRAG	2 cut(s)	92, 566
SpeI	ACTAGT	1 cut(s)	772
Sse8387I	CCTGCAGG	1 cut(s)	2044
SspDI	GGCGCC	1 cut(s)	206
SspI	AATATT	1 cut(s)	999
SspMI	CTAG	6 cut(s)	773, 1019, 1322, 1419, 1677, 2289
StyD4I	CCNGG	7 cut(s)	762, 924, 1064, 1447, 1628, 2185, 2239
StyI	CCWWGG	4 cut(s)	231, 682, 1142, 1676
TaaI	ACNGT	5 cut(s)	905, 1236, 1436, 2270, 2446
TaiI	ACGT	4 cut(s)	258, 301, 632, 2260
TaqII	GACCGA	1 cut(s)	678
TatI	WGTACW	3 cut(s)	1300, 2409, 2515
TauI	GCSGC	3 cut(s)	130, 604, 2551
TfiI	GAWTC	7 cut(s)	246, 465, 992, 1482, 1745, 1855, 2035
Tru1I	TTAA	6 cut(s)	135, 609, 635, 756, 1616, 2082
Tru9I	TTAA	6 cut(s)	135, 609, 635, 756, 1616, 2082
TscAI	CASTG	1 cut(s)	1079
TseFI	GTSAC	4 cut(s)	321, 351, 1352, 2221
TseI	GCWGC	6 cut(s)	749, 827, 1534, 1594, 1633, 2129
Tsp45I	GTSAC	4 cut(s)	321, 351, 1352, 2221
TspGWI	ACGGA	4 cut(s)	1670, 1998, 2273, 2555
TspRI	CASTG	1 cut(s)	1079
VpaK11BI	GGWCC	5 cut(s)	165, 661, 983, 2101, 2402
XapI	RAATTY	6 cut(s)	184, 952, 1200, 1771, 1811, 2279
XceI	RCATGY	2 cut(s)	79, 553
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1341
XhoI	CTCGAG	2 cut(s)	92, 566
XmaJI	CCTAGG	1 cut(s)	1676
XmiI	GTMKAC	3 cut(s)	18, 492, 1131
XmnI	GAANNNNTTC	2 cut(s)	1119, 1812
XspI	CTAG	6 cut(s)	773, 1019, 1322, 1419, 1677, 2289
ZrmI	AGTACT	2 cut(s)	1302, 2411

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.