Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0007135

Physical Location & Seq

Genomic Coordinates Forward (+)

11048864 .. 11056809

Gene Structure 7946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0140200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGGCGGAGACCAAGTACAAGTACCTGATTGAGGTCGAGAAGGGAAAGGCGGCCAAGGACGGCCGGCCGTCGCTCGGTCCCGTTTACCGGAGCCTCTTCGCCAAAGACGGCTTTCCGCAGCCGATTGCCGGAATGGACAGTTGCTGGGATGTTTTCCGCATGTCGGTGGAGAAAAATCCCGGAAACCGAATGCTTGGTCGTCGTGAGACTGTGAATGGGAAGGGTGGTAGATACGTGTGGTTAACTTACAAACAAGTCTATGATGTGGTGGTAAAAGTTGGAAATTCCATGCGCACTCTTGGTCTGGCAGAAGGAGACAAATGTGGTATATTTGGTGCCAATTGTCCAGAATGGATTATGAGCATGGAGGCTTGCAATGCTCATGGGCTCTATTGTGTTCCTTTATATGACACTCTAGGTGCTGGTGCTGTGGAATTTATCATATGCCATGCTGAAGTTTCACTTGCTTTTGTAGAAGAAAATAAGATATCTGAGCTGTTGAAGACATTGCCCAACGCATCAAAATATCTTAAGACACTTGTAAGCTTTGGCAAGGTTACCCCTGAACAAAAGGAATCAGTTGAAAAGCATGGATCTGTGATATATTCATGGAATGAATTTCTGCAACTGGGAGATAAAGACTTTGATCTTCCAGTAAAAAAGAAAAGTGATATCTGTACTATAATGTATACTAGTGGAACAACTGGTGACCCCAAGGGTGTACTGATATCCAATGAAAGCATCATTACTCTACTGGCTGGGGTGAAACGCCTGCTGGAGAGTGTAAATGAAGAGTTGGACGCGAACGACGTATATCTTTCCTTTCTTCCTCTTGCACATATCTTTGATCGGGTTATCGAGGAGTTATTTATCTGGACTGGTGCCTCAATAGGGTTTTGGCGTGGGGATGTCAAATTGTTAACTGAAGACATTGCGGAGCTAAAACCAACTATTTTTTGTGCTGTTCCTCGCGTTTTAGATAGAATCTATGCAGGCTTGAACCAGAAGATTTCATCAGGCGGCATAATAAAAAAGACGTTGTTCAATTTTGCATATTCATACAAGCATTATAACATGCAAAAGGGGCATGCACATGGAGCTGCGTCTCCAATTTCTGACAAGATTGTGTTTAGTAAGGTAAAGGAAGGATTGGGGGGTAGGGTGCGGCTTATTCTGTCTGGAGCTGCTCCTCTTTCTACTCATGTGGAATCTTACTTACGTGTGGTGGCATGCGCTCATGTTTTACAAGGATATGGTCTGACAGAAACTTGTGCTGGGACATTTGTATCGCTACCAAATGAATTGTCAATGCTTGGCACAGTGGGTCCTCCGGTTCCAAATGTGGATGTATGTCTGGAATCTGTTCCTGAAATGGGATACGACGCTCTGTCAGATACACCTCGTGGAGAAGTATGTGTAAGGGGAAAAACTTTGTTTTCAGGATACTACAAACGTGAGGACCTCACCAAAGAGGTCATGATTGATGGGTGGTTCCATACAGGAGATATTGGTGAGTGGCAACAAGATGGAAGCCTTAAAATCATTGATCGCAAGAAGAATATCTTCAAGCTTTCACAAGGAGAATATGTTGCAGTTGAAAACTTGGAGAATATTTATGGACTTGTTTCAGATATTGATGCGATATGGGTTTATGGGAACAGCTTTGAGTCCTGCCTAGTTGCAGTAGTCACTCCCAACAAGCAAGCAATTGAAAGATGGGCTCAACAAAATGATGTATCTGGTGACTTCAATTCTCTTTGTGAAAATACAAAGGTGAAAGAATACGTGCTTGGAGAGCTGAATAAGATTGCTAAAGACAAAAAGTTGAAAGGTTTTGAGGTTATAAAAGCTGTTCACCTTGACCCAGAACCGTTCGACATGGAGCGTGACCTTATCACTCCAACATACAAGAAAAAGAGGCCCCAGTTGCTTAAATACTACAAGGGCGTCATTGATAACATGTACAAGAGTGTAAATCAGCCCAAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0005886 GO:0008150 GO:0008289 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0010008 GO:0010033 GO:0012505 GO:0014070 GO:0016020 GO:0031090 GO:0031347 GO:0031410 GO:0031982 GO:0031984 GO:0032101 GO:0035091 GO:0042175 GO:0042221 GO:0042493 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0048519 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:0070273 GO:0071944 GO:0080134 GO:0097708 GO:0098588 GO:0098805 GO:0098827 GO:1900055 GO:1900056 GO:1900150 GO:1901700 GO:1901981 GO:1905622 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1336 PH START

Protein Analysis

663

Amino Acids

73.79

Weight (kDa)

6.63

Isoelectric Point (pI)

31.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	67 - 483	3.6e-80	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007135)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19040 AT4G19040 AT4G19040 AT5G45560 AT5G45560
fragaria_vesca	FvH4_5g23810 FvH4_5g23810 FvH4_5g23810 FvH4_5g23810 FvH4_5g23810
malus_domestica	MD06G1014100.v1.1
prunus_persica	Prupe.5G022400_v2.0.a1 Prupe.5G022400_v2.0.a1 Prupe.5G022400_v2.0.a1
pyrus_communis	pycom06g01110
rosa_chinensis	RchiOBHm_Chr7g0213191
rosa_laevigata	RLG00000002824
rosa_multiflora	Rmu_ssc0000084.1_g000013
rosa_roxburghii	Rroxscaffold_3G00246180
rosa_rugosa	Rorug07G0140200
rosa_samantha	Rh7AG271700 Rh7BG267500 Rh7CG291000 Rh7DG279800
rosa_wichuraiana	Rw7G023590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1071, 1844
Acc16I	TGCGCA	1 cut(s)	293
AccB1I	GGYRCC	2 cut(s)	335, 881
AccI	GTMKAC	1 cut(s)	689
AccII	CGCG	2 cut(s)	803, 972
AciI	CCGC	7 cut(s)	5, 50, 116, 157, 935, 1020, 1165
AclWI	GGATC	1 cut(s)	601
AcoI	YGGCCR	3 cut(s)	51, 61, 65
AcsI	RAATTY	3 cut(s)	283, 434, 617
AcuI	CTGAAG	2 cut(s)	474, 945
AcyI	GRCGYC	1 cut(s)	1947
AdeI	CACNNNGTG	1 cut(s)	1403
AfaI	GTAC	5 cut(s)	17, 23, 679, 723, 1964
AfiI	CCNNNNNNNGG	7 cut(s)	31, 74, 87, 128, 163, 891, 1373
AflII	CTTAAG	1 cut(s)	530
AflIII	ACRYGT	3 cut(s)	234, 1219, 1959
AgsI	TTSAA	9 cut(s)	502, 584, 1000, 1045, 1567, 1598, 1712, 1750, 1828
AhdI	GACNNNNNGTC	1 cut(s)	1387
AhlI	ACTAGT	1 cut(s)	692
AjuI	GAANNNNNNNTTGG	2 cut(s)	1773, 1805
AluBI	AGCT	9 cut(s)	496, 546, 940, 1100, 1184, 1570, 1662, 1798, 1850
AluI	AGCT	9 cut(s)	496, 546, 940, 1100, 1184, 1570, 1662, 1798, 1850
Alw26I	GTCTC	4 cut(s)	2, 200, 309, 1110
AlwI	GGATC	1 cut(s)	601
AlwNI	CAGNNNCTG	1 cut(s)	144
AoxI	GGCC	5 cut(s)	51, 61, 65, 1919, 1986
ApeKI	GCWGC	3 cut(s)	118, 1100, 1184
ApoI	RAATTY	3 cut(s)	283, 434, 617
ArsI	GACNNNNNNTTYG	4 cut(s)	181, 213, 1289, 1321
Asp700I	GAANNNNTTC	2 cut(s)	1362, 1562
AspLEI	GCGC	2 cut(s)	294, 1235
AspS9I	GGNCC	4 cut(s)	77, 1325, 1459, 1920
AsuC2I	CCSGG	1 cut(s)	180
AsuHPI	GGTGA	7 cut(s)	719, 775, 1456, 1523, 1754, 1786, 1847
AvaII	GGWCC	3 cut(s)	77, 1325, 1459
BaeI	ACNNNNGTAYC	2 cut(s)	1269, 1302
BanI	GGYRCC	2 cut(s)	335, 881
BanII	GRGCYC	2 cut(s)	390, 1723
BauI	CACGAG	1 cut(s)	1401
BbsI	GAAGAC	2 cut(s)	509, 933
BbvI	GCAGC	3 cut(s)	130, 1087, 1171
BccI	CCATC	3 cut(s)	1478, 1520, 1710
BceAI	ACGGC	3 cut(s)	52, 76, 124
BciVI	GTATCC	2 cut(s)	1370, 1436
BcnI	CCSGG	1 cut(s)	180
BcoDI	GTCTC	4 cut(s)	2, 200, 309, 1110
BcuI	ACTAGT	1 cut(s)	692
BfaI	CTAG	3 cut(s)	416, 693, 1676
BfrI	CTTAAG	1 cut(s)	530
BfuI	GTATCC	2 cut(s)	1370, 1436
BisI	GCNGC	6 cut(s)	51, 119, 1021, 1101, 1166, 1185
BlsI	GCNGC	6 cut(s)	52, 120, 1022, 1102, 1167, 1186
Bme1390I	CCNGG	1 cut(s)	180
Bme18I	GGWCC	3 cut(s)	77, 1325, 1459
BmeRI	GACNNNNNGTC	1 cut(s)	1387
BmgT120I	GGNCC	4 cut(s)	77, 1325, 1459, 1920
BmiI	GGNNCC	8 cut(s)	79, 92, 337, 883, 1326, 1335, 1493, 1922
BmrFI	CCNGG	1 cut(s)	180
BmrI	ACTGGG	2 cut(s)	638, 1918
BmsI	GCATC	3 cut(s)	527, 750, 1627
BmuI	ACTGGG	2 cut(s)	638, 1918
BpiI	GAAGAC	2 cut(s)	509, 933
BpmI	CTGGAG	2 cut(s)	797, 1200
BpuMI	CCSGG	1 cut(s)	180
BsaAI	YACGTR	3 cut(s)	235, 1220, 1786
BsaHI	GRCGYC	1 cut(s)	1947
BsaI	GGTCTC	1 cut(s)	2
BsaJI	CCNNGG	3 cut(s)	54, 714, 1983
BsaWI	WCCGGW	2 cut(s)	87, 1330
BsaXI	ACNNNNNCTCC	3 cut(s)	29, 1572, 1602
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 74, 87, 128, 163, 891, 1373
Bse118I	RCCGGY	1 cut(s)	63
Bse1I	ACTGG	6 cut(s)	633, 653, 709, 759, 883, 1924
Bse3DI	GCAATG	3 cut(s)	382, 506, 930
BseDI	CCNNGG	3 cut(s)	54, 714, 1983
BseGI	GGATG	3 cut(s)	154, 913, 1351
BseLI	CCNNNNNNNGG	7 cut(s)	31, 74, 87, 128, 163, 891, 1373
BseMI	GCAATG	3 cut(s)	382, 506, 930
BseMII	CTCAG	1 cut(s)	483
BseNI	ACTGG	6 cut(s)	633, 653, 709, 759, 883, 1924
BseRI	GAGGAG	2 cut(s)	875, 1179
BseX3I	CGGCCG	2 cut(s)	61, 65
BseXI	GCAGC	3 cut(s)	130, 1087, 1171
BseYI	CCCAGC	3 cut(s)	144, 758, 1274
Bsh1236I	CGCG	2 cut(s)	803, 972
Bsh1285I	CGRYCG	2 cut(s)	64, 68
BshFI	GGCC	5 cut(s)	53, 63, 67, 1921, 1988
BshNI	GGYRCC	2 cut(s)	335, 881
BsiEI	CGRYCG	2 cut(s)	64, 68
BsiSI	CCGG	5 cut(s)	64, 88, 129, 180, 1331
BslFI	GGGAC	2 cut(s)	63, 1291
BslI	CCNNNNNNNGG	7 cut(s)	31, 74, 87, 128, 163, 891, 1373
BsmAI	GTCTC	4 cut(s)	2, 200, 309, 1110
BsmBI	CGTCTC	1 cut(s)	1110
BsmFI	GGGAC	2 cut(s)	63, 1291
BsmI	GAATGC	1 cut(s)	195
BsnI	GGCC	5 cut(s)	53, 63, 67, 1921, 1988
Bso31I	GGTCTC	1 cut(s)	2
Bsp1286I	GDGCHC	2 cut(s)	390, 1723
Bsp1407I	TGTACA	1 cut(s)	1962
Bsp143I	GATC	4 cut(s)	593, 646, 847, 1546
BspACI	CCGC	7 cut(s)	5, 50, 116, 157, 935, 1020, 1165
BspANI	GGCC	5 cut(s)	53, 63, 67, 1921, 1988
BspCNI	CTCAG	1 cut(s)	484
BspFNI	CGCG	2 cut(s)	803, 972
BspHI	TCATGA	1 cut(s)	1476
BspLI	GGNNCC	8 cut(s)	79, 92, 337, 883, 1326, 1335, 1493, 1922
BspPI	GGATC	1 cut(s)	601
BspT107I	GGYRCC	2 cut(s)	335, 881
BspTI	CTTAAG	1 cut(s)	530
BspTNI	GGTCTC	1 cut(s)	2
BsrDI	GCAATG	3 cut(s)	382, 506, 930
BsrFI	RCCGGY	1 cut(s)	63
BsrGI	TGTACA	1 cut(s)	1962
BsrI	ACTGG	6 cut(s)	633, 653, 709, 759, 883, 1924
BssAI	RCCGGY	1 cut(s)	63
BssECI	CCNNGG	3 cut(s)	54, 714, 1983
BssMI	GATC	4 cut(s)	593, 646, 847, 1546
BssNAI	GTATAC	1 cut(s)	690
BssNI	GRCGYC	1 cut(s)	1947
BssSI	CACGAG	1 cut(s)	1401
BssT1I	CCWWGG	3 cut(s)	54, 714, 1983
Bst1107I	GTATAC	1 cut(s)	690
Bst2BI	CACGAG	1 cut(s)	1401
Bst4CI	ACNGT	4 cut(s)	140, 211, 1321, 1872
Bst6I	CTCTTC	2 cut(s)	101, 786
BstACI	GRCGYC	1 cut(s)	1947
BstAFI	CTTAAG	1 cut(s)	530
BstAUI	TGTACA	1 cut(s)	1962
BstBAI	YACGTR	3 cut(s)	235, 1220, 1786
BstC8I	GCNNGC	7 cut(s)	65, 373, 773, 994, 1089, 1231, 1704
BstDEI	CTNAG	1 cut(s)	492
BstEII	GGTNACC	2 cut(s)	556, 707
BstENI	CCTNNNNNAGG	1 cut(s)	29
BstF5I	GGATG	3 cut(s)	154, 913, 1351
BstFNI	CGCG	2 cut(s)	803, 972
BstHHI	GCGC	2 cut(s)	294, 1235
BstKTI	GATC	4 cut(s)	596, 649, 850, 1549
BstMAI	GTCTC	4 cut(s)	2, 200, 309, 1110
BstMBI	GATC	4 cut(s)	593, 646, 847, 1546
BstMCI	CGRYCG	2 cut(s)	64, 68
BstMWI	GCNNNNNNNGC	5 cut(s)	377, 1084, 1097, 1795, 1927
BstNSI	RCATGY	5 cut(s)	163, 1078, 1091, 1233, 1963
BstPI	GGTNACC	2 cut(s)	556, 707
BstSCI	CCNGG	1 cut(s)	178
BstUI	CGCG	2 cut(s)	803, 972
BstV1I	GCAGC	3 cut(s)	130, 1087, 1171
BstV2I	GAAGAC	2 cut(s)	509, 933
BstX2I	RGATCY	1 cut(s)	593
BstYI	RGATCY	1 cut(s)	593
BstZ17I	GTATAC	1 cut(s)	690
BstZI	CGGCCG	2 cut(s)	61, 65
BsuI	GTATCC	2 cut(s)	1370, 1436
BsuRI	GGCC	5 cut(s)	53, 63, 67, 1921, 1988
BtsCI	GGATG	3 cut(s)	154, 913, 1351
BtsIMutI	CAGTG	1 cut(s)	1326
Cac8I	GCNNGC	7 cut(s)	65, 373, 773, 994, 1089, 1231, 1704
CaiI	CAGNNNCTG	1 cut(s)	144
CciI	TCATGA	1 cut(s)	1476
CfoI	GCGC	2 cut(s)	294, 1235
Cfr10I	RCCGGY	1 cut(s)	63
Cfr13I	GGNCC	4 cut(s)	77, 1325, 1459, 1920
CseI	GACGC	4 cut(s)	809, 1092, 1391, 1936
Csp6I	GTAC	5 cut(s)	16, 22, 678, 722, 1963
CviQI	GTAC	5 cut(s)	16, 22, 678, 722, 1963
DdeI	CTNAG	1 cut(s)	492
DpnI	GATC	4 cut(s)	595, 648, 849, 1548
DpnII	GATC	4 cut(s)	593, 646, 847, 1546
DraIII	CACNNNGTG	1 cut(s)	1403
DriI	GACNNNNNGTC	1 cut(s)	1387
EaeI	YGGCCR	3 cut(s)	51, 61, 65
EagI	CGGCCG	2 cut(s)	61, 65
Eam1104I	CTCTTC	2 cut(s)	101, 786
Eam1105I	GACNNNNNGTC	1 cut(s)	1387
EarI	CTCTTC	2 cut(s)	101, 786
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	2 cut(s)	61, 65
Eco130I	CCWWGG	3 cut(s)	54, 714, 1983
Eco147I	AGGCCT	1 cut(s)	1988
Eco24I	GRGCYC	2 cut(s)	390, 1723
Eco31I	GGTCTC	1 cut(s)	2
Eco32I	GATATC	3 cut(s)	489, 673, 729
Eco47I	GGWCC	3 cut(s)	77, 1325, 1459
Eco52I	CGGCCG	2 cut(s)	61, 65
Eco57I	CTGAAG	2 cut(s)	474, 945
Eco91I	GGTNACC	2 cut(s)	556, 707
EcoNI	CCTNNNNNAGG	1 cut(s)	29
EcoO109I	RGGNCCY	3 cut(s)	1325, 1459, 1920
EcoO65I	GGTNACC	2 cut(s)	556, 707
EcoRV	GATATC	3 cut(s)	489, 673, 729
EcoT14I	CCWWGG	3 cut(s)	54, 714, 1983
EcoT38I	GRGCYC	2 cut(s)	390, 1723
ErhI	CCWWGG	3 cut(s)	54, 714, 1983
Esp3I	CGTCTC	1 cut(s)	1110
FalI	AAGNNNNNCTT	4 cut(s)	447, 479, 1547, 1579
FaqI	GGGAC	2 cut(s)	63, 1291
FauNDI	CATATG	1 cut(s)	443
FblI	GTMKAC	1 cut(s)	689
Fnu4HI	GCNGC	6 cut(s)	51, 119, 1021, 1101, 1166, 1185
FokI	GGATG	3 cut(s)	161, 920, 1358
FriOI	GRGCYC	2 cut(s)	390, 1723
FseI	GGCCGGCC	1 cut(s)	67
Fsp4HI	GCNGC	6 cut(s)	51, 119, 1021, 1101, 1166, 1185
FspAI	RTGCGCAY	1 cut(s)	293
FspBI	CTAG	3 cut(s)	416, 693, 1676
FspI	TGCGCA	1 cut(s)	293
GlaI	GCGC	2 cut(s)	293, 1234
GluI	GCNGC	6 cut(s)	51, 119, 1021, 1101, 1166, 1185
GsaI	CCCAGC	3 cut(s)	148, 762, 1278
GsuI	CTGGAG	2 cut(s)	797, 1200
HaeIII	GGCC	5 cut(s)	53, 63, 67, 1921, 1988
HapII	CCGG	5 cut(s)	64, 88, 129, 180, 1331
HgaI	GACGC	4 cut(s)	809, 1092, 1391, 1936
HhaI	GCGC	2 cut(s)	294, 1235
Hin1I	GRCGYC	1 cut(s)	1947
Hin6I	GCGC	2 cut(s)	292, 1233
HinP1I	GCGC	2 cut(s)	292, 1233
HincII	GTYRAC	2 cut(s)	243, 921
HindII	GTYRAC	2 cut(s)	243, 921
HindIII	AAGCTT	2 cut(s)	544, 1568
HinfI	GANTC	5 cut(s)	575, 984, 1208, 1358, 1667
HpaI	GTTAAC	2 cut(s)	243, 921
HpaII	CCGG	5 cut(s)	64, 88, 129, 180, 1331
HphI	GGTGA	7 cut(s)	719, 775, 1456, 1523, 1754, 1786, 1847
Hpy166II	GTNNAC	6 cut(s)	85, 243, 690, 722, 921, 1855
Hpy188I	TCNGA	5 cut(s)	493, 1117, 1260, 1393, 1630
Hpy188III	TCNNGA	9 cut(s)	37, 203, 347, 874, 1179, 1355, 1367, 1440, 1477
Hpy8I	GTNNAC	6 cut(s)	85, 243, 690, 722, 921, 1855
Hpy99I	CGWCG	4 cut(s)	73, 204, 812, 1385
HpyAV	CCTTC	4 cut(s)	34, 214, 305, 1139
HpyCH4III	ACNGT	4 cut(s)	140, 211, 1321, 1872
HpyCH4IV	ACGT	6 cut(s)	234, 810, 1037, 1219, 1453, 1785
HpyCH4V	TGCA	9 cut(s)	375, 625, 836, 992, 1052, 1078, 1091, 1592, 1682
HpyF10VI	GCNNNNNNNGC	5 cut(s)	377, 1084, 1097, 1795, 1927
HpyF3I	CTNAG	1 cut(s)	492
HpySE526I	ACGT	6 cut(s)	234, 810, 1037, 1219, 1453, 1785
Hsp92I	GRCGYC	1 cut(s)	1947
HspAI	GCGC	2 cut(s)	292, 1233
KroI	GCCGGC	1 cut(s)	63
KroNI	GCCGGC	1 cut(s)	65
KspAI	GTTAAC	2 cut(s)	243, 921
Kzo9I	GATC	4 cut(s)	593, 646, 847, 1546
LmnI	GCTCC	6 cut(s)	90, 937, 1097, 1181, 1192, 1882
Lsp1109I	GCAGC	3 cut(s)	130, 1087, 1171
LweI	GCATC	3 cut(s)	527, 750, 1627
MaeI	CTAG	3 cut(s)	416, 693, 1676
MaeII	ACGT	6 cut(s)	234, 810, 1037, 1219, 1453, 1785
MaeIII	GTNAC	5 cut(s)	556, 707, 1687, 1742, 1886
MalI	GATC	4 cut(s)	595, 648, 849, 1548
MboI	GATC	4 cut(s)	593, 646, 847, 1546
MfeI	CAATTG	2 cut(s)	340, 1707
MflI	RGATCY	1 cut(s)	593
MhlI	GDGCHC	2 cut(s)	390, 1723
MlyI	GAGTC	1 cut(s)	1676
MmeI	TCCRAC	3 cut(s)	259, 777, 1925
MroNI	GCCGGC	1 cut(s)	63
MroXI	GAANNNNTTC	2 cut(s)	1362, 1562
MseI	TTAA	5 cut(s)	242, 531, 920, 1536, 1932
MslI	CAYNNNNRTG	2 cut(s)	164, 1092
MspCI	CTTAAG	1 cut(s)	530
MspI	CCGG	5 cut(s)	64, 88, 129, 180, 1331
MspR9I	CCNGG	1 cut(s)	180
MunI	CAATTG	2 cut(s)	340, 1707
Mva1269I	GAATGC	1 cut(s)	195
MvnI	CGCG	2 cut(s)	803, 972
MwoI	GCNNNNNNNGC	5 cut(s)	377, 1084, 1097, 1795, 1927
NaeI	GCCGGC	1 cut(s)	65
NciI	CCSGG	1 cut(s)	180
NdeI	CATATG	1 cut(s)	443
NdeII	GATC	4 cut(s)	593, 646, 847, 1546
NgoMIV	GCCGGC	1 cut(s)	63
NlaIV	GGNNCC	8 cut(s)	79, 92, 337, 883, 1326, 1335, 1493, 1922
NmuCI	GTSAC	4 cut(s)	707, 1687, 1742, 1886
NsbI	TGCGCA	1 cut(s)	293
NspI	RCATGY	5 cut(s)	163, 1078, 1091, 1233, 1963
PaeI	GCATGC	2 cut(s)	1091, 1233
PagI	TCATGA	1 cut(s)	1476
PceI	AGGCCT	1 cut(s)	1988
PciI	ACATGT	1 cut(s)	1959
PcsI	WCGNNNNNNNCGW	1 cut(s)	807
PctI	GAATGC	1 cut(s)	195
PdiI	GCCGGC	1 cut(s)	65
PdmI	GAANNNNTTC	2 cut(s)	1362, 1562
PfeI	GAWTC	4 cut(s)	575, 984, 1208, 1358
PfoI	TCCNGGA	1 cut(s)	178
PkrI	GCNGC	6 cut(s)	52, 120, 1022, 1102, 1167, 1186
PleI	GAGTC	1 cut(s)	1675
PpsI	GAGTC	1 cut(s)	1675
Ppu21I	YACGTR	3 cut(s)	235, 1220, 1786
PpuMI	RGGWCCY	2 cut(s)	1325, 1459
PscI	ACATGT	1 cut(s)	1959
PsiI	TTATAA	2 cut(s)	1071, 1844
Psp5II	RGGWCCY	2 cut(s)	1325, 1459
PspEI	GGTNACC	2 cut(s)	556, 707
PspFI	CCCAGC	3 cut(s)	144, 758, 1274
PspN4I	GGNNCC	8 cut(s)	79, 92, 337, 883, 1326, 1335, 1493, 1922
PspPI	GGNCC	4 cut(s)	77, 1325, 1459, 1920
PspPPI	RGGWCCY	2 cut(s)	1325, 1459
PstNI	CAGNNNCTG	1 cut(s)	144
PsuI	RGATCY	1 cut(s)	593
RigI	GGCCGGCC	1 cut(s)	67
RsaI	GTAC	5 cut(s)	17, 23, 679, 723, 1964
RsaNI	GTAC	5 cut(s)	16, 22, 678, 722, 1963
RseI	CAYNNNNRTG	2 cut(s)	164, 1092
SaqAI	TTAA	5 cut(s)	242, 531, 920, 1536, 1932
SatI	GCNGC	6 cut(s)	51, 119, 1021, 1101, 1166, 1185
Sau3AI	GATC	4 cut(s)	593, 646, 847, 1546
Sau96I	GGNCC	4 cut(s)	77, 1325, 1459, 1920
SchI	GAGTC	1 cut(s)	1676
ScrFI	CCNGG	1 cut(s)	180
SduI	GDGCHC	2 cut(s)	390, 1723
SfaNI	GCATC	3 cut(s)	527, 750, 1627
SinI	GGWCC	3 cut(s)	77, 1325, 1459
SmiMI	CAYNNNNRTG	2 cut(s)	164, 1092
SmlI	CTYRAG	1 cut(s)	530
SmoI	CTYRAG	1 cut(s)	530
SpeI	ACTAGT	1 cut(s)	692
SphI	GCATGC	2 cut(s)	1091, 1233
SseBI	AGGCCT	1 cut(s)	1988
SsiI	CCGC	7 cut(s)	5, 50, 116, 157, 935, 1020, 1165
SspI	AATATT	1 cut(s)	1612
SspMI	CTAG	3 cut(s)	416, 693, 1676
StuI	AGGCCT	1 cut(s)	1988
StyD4I	CCNGG	1 cut(s)	178
StyI	CCWWGG	3 cut(s)	54, 714, 1983
TaaI	ACNGT	4 cut(s)	140, 211, 1321, 1872
TaiI	ACGT	6 cut(s)	237, 813, 1040, 1222, 1456, 1788
TaqI	TCGA	3 cut(s)	36, 858, 1875
TaqII	GACCGA	1 cut(s)	65
TatI	WGTACW	4 cut(s)	15, 677, 721, 1962
TauI	GCSGC	3 cut(s)	53, 1023, 1168
TfiI	GAWTC	4 cut(s)	575, 984, 1208, 1358
Tru1I	TTAA	5 cut(s)	242, 531, 920, 1536, 1932
Tru9I	TTAA	5 cut(s)	242, 531, 920, 1536, 1932
TscAI	CASTG	1 cut(s)	1326
TseFI	GTSAC	4 cut(s)	707, 1687, 1742, 1886
TseI	GCWGC	3 cut(s)	118, 1100, 1184
Tsp45I	GTSAC	4 cut(s)	707, 1687, 1742, 1886
TspDTI	ATGAA	7 cut(s)	597, 630, 750, 804, 1002, 1047, 1314
TspRI	CASTG	1 cut(s)	1326
Vha464I	CTTAAG	1 cut(s)	530
VpaK11BI	GGWCC	3 cut(s)	77, 1325, 1459
XagI	CCTNNNNNAGG	1 cut(s)	29
XapI	RAATTY	3 cut(s)	283, 434, 617
XceI	RCATGY	5 cut(s)	163, 1078, 1091, 1233, 1963
XmiI	GTMKAC	1 cut(s)	689
XmnI	GAANNNNTTC	2 cut(s)	1362, 1562
XspI	CTAG	3 cut(s)	416, 693, 1676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.