RLG00000005769

SNW SKI-interacting

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0018034
Physical Location & Seq
Reverse (-)
1594693 .. 1596517
1825 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005769

Sequence Viewer

Length: 1440 bp
ATGGCGGCTCTGATCCATCGTCTTCCACCTGTGAAATCGACCACAACAACCTACTACGACCACTCAAACGATCAATGGTTCAAGGAGAGGAACAGTAGTAATACAATGACTTCTTCAGTCCTTCCTACCAATGTGTTGGATTTCCGTGACGGCGGTGCTTTCCCGGAGATTCATAAACCTCAGTACCCTCTTGTTTCTTTTGATGCATATGGAAACATAGCCTATGATGTCATTGTTAAGCAAAACGAAAATGCCAAAAGAACTGTGTTCTCAAAGCATAAAGACCTTAAGCCTATAATTTTGACAGACAATGAAGAGGAGGAGAACATGTATAGTGACGAGGAGATGCAGAAGGAGATTGAAAAAACCACAATAGAAACAAAAGCTGCTCTTGAGAAGATTGTTAATGTGAGACTGAGTGCTGCACGGCCAAAAAGCCAACCGAAACAGACCCAAGACTCGAAACTGATCAAGTACAGACCATCACAGACGTCAGTGGCATTCAACTCTGGTGCCAAGGAGAGGATGATAAGGATGGTGGAGAAGCCTGTGGATCCACTTGACCCTCCCAAGTTTCAGCACAAGCGTGTTCCGAGGGCTTCTGAAGAGCCGCCTGTCCCAGTGCTACATTCTCCTCCTAGGCCGGTGAGTGCGGCTGATAAGGACTGGAGTATTCCGCCTTGTATTTCACAGTTCAAGAACCCGAAAGGGTATACAATCCCATTGGACAAACGCGAAGGTGAGAACTTTGCACATCTCCATGACTCTTTGCATGTAGCACTAGTGAAATGTAAGGAGGAACTTAATCTAAGAGCGAGAGTTCAAATGGAGAAGATGGAGAAGGAGCAGGAAAGGAGAAACCAGGAGCTGAGAGATATAGCTCAGAGAGCTCGTGCAGAGAGAACAGCTAGTGCTGCTGCTATTCCAGAGCCTAATGGTGAGAAGACAGCAATGGATACTGATGAAACAAAAGAAGAGAGATTGAAGCGGGATGAGATTCGTCGAGAGAGGGAAAGGGAGAGAAGGTTGACAAAGAATAAGAGAACTAGAGTCACAAGAGATGGCAATCGTGATATCAGTGAGAAAATTGCTTTTGGCATGGCTTCTATTGGAGTTGGAGAGGAAAGAGGGGAAGAGAAAGGAATGGACTCTGGGTTTCGCAACGATGACCAGTACAATGTCTACGAGAAGCACTTGTTTACTGCTCAGTCTACACTCTCGCGCCTGTACATGGATGTTGATGCTGATACCTACGGAGGTGCTGATGAGCAGTTGGATAAGATCATGAAGACTGATCGCTTCAAACCTCACAAAGGATTTGGAGGAACTACTGAAAGGGCAGGTCCGAGAGATAGACCGGTTGAGTTTGATCAGGATGTTAAAGAAGCTGATCCCTTTGGTCTCGACGAGATAATGGCAAAGATGAAGAAGGCAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000350 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003714 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006970 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008380 GO:0008630 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010555 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010646 GO:0010647 GO:0010720 GO:0012501 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0017015 GO:0019219 GO:0019222 GO:0022008 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0030511 GO:0030522 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032101 GO:0032104 GO:0032107 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033120 GO:0033554 GO:0033993 GO:0034399 GO:0034622 GO:0034641 GO:0035257 GO:0035556 GO:0036002 GO:0042221 GO:0042752 GO:0042771 GO:0042809 GO:0042974 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046332 GO:0046483 GO:0048024 GO:0048026 GO:0048384 GO:0048385 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050684 GO:0050685 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051254 GO:0051427 GO:0051569 GO:0051571 GO:0051716 GO:0051960 GO:0051962 GO:0060255 GO:0060284 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0070562 GO:0071007 GO:0071013 GO:0071014 GO:0071141 GO:0071704 GO:0071826 GO:0071840 GO:0072331 GO:0072332 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0090304 GO:0097159 GO:0097190 GO:0097193 GO:0097305 GO:0140110 GO:1901360 GO:1901363 GO:1901700 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903507 GO:1903508 GO:1903844 GO:1903846 GO:1905269 GO:1990904 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 ko04330 ko05169 ko05203 map03040 map04330 map05169 map05203
Pfam Domains
Protein Families
SKIP_SNW

Protein Analysis

480

Amino Acids

55.02

Weight (kDa)

8.19

Isoelectric Point (pI)

46.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SKIP_SNW PF02731 156 - 301 2.8e-41 SKIP/SNW domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018034)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g35450
rosa_chinensis RchiOBHm_Chr4g0445081
rosa_laevigata RLG00000005769
rosa_multiflora Rmu_sc0003784.1_g000006 Rmu_sc0029783.1_g000010
rosa_roxburghii Rroxscaffold_5G00385620
rosa_rugosa Rorug04G0358800
rosa_samantha Rh4BG431400 Rh4CG445900 Rh4DG427500
rosa_wichuraiana Rw4G035960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 494
Acc36I ACCTGC 1 cut(s) 1331
AccB1I GGYRCC 1 cut(s) 512
AccI GTMKAC 3 cut(s) 713, 1182, 1211
AccII CGCG 2 cut(s) 735, 1222
AciI CCGC 6 cut(s) 5, 153, 611, 653, 677, 988
AclWI GGATC 4 cut(s) 7, 548, 561, 1385
AcoI YGGCCR 1 cut(s) 428
AcuI CTGAAG 2 cut(s) 99, 624
AcyI GRCGYC 1 cut(s) 491
AfaI GTAC 4 cut(s) 185, 476, 1175, 1229
AfiI CCNNNNNNNGG 3 cut(s) 522, 1231, 1313
AflII CTTAAG 1 cut(s) 287
AflIII ACRYGT 1 cut(s) 327
AgeI ACCGGT 1 cut(s) 1357
AgsI TTSAA 7 cut(s) 82, 362, 505, 697, 824, 985, 1303
AhlI ACTAGT 1 cut(s) 781
AjnI CCWGG 1 cut(s) 861
AleI CACNNNNGTG 1 cut(s) 585
AluBI AGCT 6 cut(s) 386, 868, 881, 890, 908, 1388
AluI AGCT 6 cut(s) 386, 868, 881, 890, 908, 1388
Alw21I GWGCWC 1 cut(s) 892
Alw26I GTCTC 2 cut(s) 406, 1406
AlwI GGATC 4 cut(s) 7, 548, 561, 1385
AlwNI CAGNNNCTG 1 cut(s) 868
AoxI GGCC 2 cut(s) 428, 641
ApeKI GCWGC 4 cut(s) 386, 422, 914, 917
AsiGI ACCGGT 1 cut(s) 1357
AspA2I CCTAGG 1 cut(s) 638
AspLEI GCGC 1 cut(s) 1224
AspS9I GGNCC 1 cut(s) 1343
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 3 cut(s) 658, 752, 950
AvaII GGWCC 1 cut(s) 1343
AvrII CCTAGG 1 cut(s) 638
BaeI ACNNNNGTAYC 2 cut(s) 167, 200
BamHI GGATCC 1 cut(s) 553
BanI GGYRCC 1 cut(s) 512
BanII GRGCYC 1 cut(s) 892
BauI CACGAG 1 cut(s) 891
BbsI GAAGAC 3 cut(s) 14, 950, 1295
Bbv12I GWGCWC 1 cut(s) 892
BbvI GCAGC 4 cut(s) 373, 409, 901, 904
BccI CCATC 5 cut(s) 24, 490, 529, 829, 1055
BceAI ACGGC 2 cut(s) 166, 443
BciT130I CCWGG 1 cut(s) 863
BciVI GTATCC 1 cut(s) 949
BclI TGATCA 2 cut(s) 468, 1369
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 2 cut(s) 406, 1406
BcuI ACTAGT 1 cut(s) 781
BfaI CTAG 4 cut(s) 639, 782, 909, 1047
BfrI CTTAAG 1 cut(s) 287
BfuAI ACCTGC 1 cut(s) 1331
BfuI GTATCC 1 cut(s) 949
BisI GCNGC 7 cut(s) 6, 387, 423, 611, 654, 915, 918
BlnI CCTAGG 1 cut(s) 638
BlsI GCNGC 7 cut(s) 7, 388, 424, 612, 655, 916, 919
Bme1390I CCNGG 2 cut(s) 164, 863
Bme18I GGWCC 1 cut(s) 1343
BmgT120I GGNCC 1 cut(s) 1343
BmiI GGNNCC 2 cut(s) 514, 555
BmrFI CCNGG 2 cut(s) 164, 863
BmrI ACTGGG 1 cut(s) 614
BmsI GCATC 3 cut(s) 193, 336, 1231
BmuI ACTGGG 1 cut(s) 614
BpiI GAAGAC 3 cut(s) 14, 950, 1295
BpmI CTGGAG 1 cut(s) 688
BpuEI CTTGAG 1 cut(s) 413
BpuMI CCSGG 1 cut(s) 164
BsaBI GATNNNNATC 1 cut(s) 1065
BsaHI GRCGYC 1 cut(s) 491
BsaI GGTCTC 1 cut(s) 1406
BsaJI CCNNGG 3 cut(s) 516, 593, 638
BsaWI WCCGGW 1 cut(s) 1357
BsaXI ACNNNNNCTCC 4 cut(s) 314, 344, 1010, 1040
Bsc4I CCNNNNNNNGG 3 cut(s) 522, 1231, 1313
Bse118I RCCGGY 2 cut(s) 643, 1357
Bse1I ACTGG 3 cut(s) 620, 671, 1171
Bse3DI GCAATG 1 cut(s) 957
Bse8I GATNNNNATC 1 cut(s) 1065
BseBI CCWGG 1 cut(s) 863
BseDI CCNNGG 3 cut(s) 516, 593, 638
BseGI GGATG 5 cut(s) 531, 540, 997, 1240, 1381
BseJI GATNNNNATC 1 cut(s) 1065
BseLI CCNNNNNNNGG 3 cut(s) 522, 1231, 1313
BseMI GCAATG 1 cut(s) 957
BseMII CTCAG 5 cut(s) 194, 407, 860, 896, 1220
BseNI ACTGG 3 cut(s) 620, 671, 1171
BseRI GAGGAG 4 cut(s) 332, 335, 356, 624
BseXI GCAGC 4 cut(s) 373, 409, 901, 904
BsgI GTGCAG 2 cut(s) 408, 915
Bsh1236I CGCG 2 cut(s) 735, 1222
BshFI GGCC 2 cut(s) 430, 643
BshNI GGYRCC 1 cut(s) 512
BshTI ACCGGT 1 cut(s) 1357
BsiHKAI GWGCWC 1 cut(s) 892
BsiSI CCGG 3 cut(s) 164, 644, 1358
BslFI GGGAC 1 cut(s) 602
BslI CCNNNNNNNGG 3 cut(s) 522, 1231, 1313
BsmAI GTCTC 2 cut(s) 406, 1406
BsmFI GGGAC 1 cut(s) 602
BsmI GAATGC 1 cut(s) 500
BsnI GGCC 2 cut(s) 430, 643
Bso31I GGTCTC 1 cut(s) 1406
Bsp1286I GDGCHC 1 cut(s) 892
Bsp1407I TGTACA 1 cut(s) 1227
Bsp143I GATC 8 cut(s) 12, 70, 468, 553, 1281, 1294, 1369, 1390
BspACI CCGC 6 cut(s) 5, 153, 611, 653, 677, 988
BspANI GGCC 2 cut(s) 430, 643
BspCNI CTCAG 5 cut(s) 193, 408, 861, 895, 1219
BspFNI CGCG 2 cut(s) 735, 1222
BspHI TCATGA 1 cut(s) 1284
BspLI GGNNCC 2 cut(s) 514, 555
BspMI ACCTGC 1 cut(s) 1331
BspPI GGATC 4 cut(s) 7, 548, 561, 1385
BspQI GCTCTTC 1 cut(s) 600
BspT107I GGYRCC 1 cut(s) 512
BspTI CTTAAG 1 cut(s) 287
BspTNI GGTCTC 1 cut(s) 1406
BsrDI GCAATG 1 cut(s) 957
BsrFI RCCGGY 2 cut(s) 643, 1357
BsrGI TGTACA 1 cut(s) 1227
BsrI ACTGG 3 cut(s) 620, 671, 1171
BssAI RCCGGY 2 cut(s) 643, 1357
BssECI CCNNGG 3 cut(s) 516, 593, 638
BssMI GATC 8 cut(s) 12, 70, 468, 553, 1281, 1294, 1369, 1390
BssNAI GTATAC 1 cut(s) 714
BssNI GRCGYC 1 cut(s) 491
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 2 cut(s) 516, 638
Bst1107I GTATAC 1 cut(s) 714
Bst2BI CACGAG 1 cut(s) 891
Bst2UI CCWGG 1 cut(s) 863
Bst4CI ACNGT 3 cut(s) 95, 265, 693
Bst6I CTCTTC 4 cut(s) 309, 600, 969, 1128
BstACI GRCGYC 1 cut(s) 491
BstAFI CTTAAG 1 cut(s) 287
BstAUI TGTACA 1 cut(s) 1227
BstDEI CTNAG 6 cut(s) 180, 416, 809, 869, 882, 1206
BstENI CCTNNNNNAGG 1 cut(s) 1311
BstF5I GGATG 5 cut(s) 531, 540, 997, 1240, 1381
BstFNI CGCG 2 cut(s) 735, 1222
BstHHI GCGC 1 cut(s) 1224
BstKTI GATC 8 cut(s) 15, 73, 471, 556, 1284, 1297, 1372, 1393
BstMAI GTCTC 2 cut(s) 406, 1406
BstMBI GATC 8 cut(s) 12, 70, 468, 553, 1281, 1294, 1369, 1390
BstMWI GCNNNNNNNGC 2 cut(s) 887, 914
BstNI CCWGG 1 cut(s) 863
BstNSI RCATGY 2 cut(s) 331, 776
BstSCI CCNGG 2 cut(s) 162, 861
BstUI CGCG 2 cut(s) 735, 1222
BstV1I GCAGC 4 cut(s) 373, 409, 901, 904
BstV2I GAAGAC 3 cut(s) 14, 950, 1295
BstX2I RGATCY 1 cut(s) 553
BstXI CCANNNNNNTGG 1 cut(s) 136
BstYI RGATCY 1 cut(s) 553
BstZ17I GTATAC 1 cut(s) 714
BsuI GTATCC 1 cut(s) 949
BsuRI GGCC 2 cut(s) 430, 643
BtsCI GGATG 5 cut(s) 531, 540, 997, 1240, 1381
BtsIMutI CAGTG 3 cut(s) 501, 627, 1084
BveI ACCTGC 1 cut(s) 1331
CaiI CAGNNNCTG 1 cut(s) 868
CciI TCATGA 1 cut(s) 1284
CfoI GCGC 1 cut(s) 1224
Cfr10I RCCGGY 2 cut(s) 643, 1357
Cfr13I GGNCC 1 cut(s) 1343
Csp6I GTAC 4 cut(s) 184, 475, 1174, 1228
CspAI ACCGGT 1 cut(s) 1357
CviAII CATG 6 cut(s) 328, 761, 773, 1099, 1231, 1285
CviQI GTAC 4 cut(s) 184, 475, 1174, 1228
DdeI CTNAG 6 cut(s) 180, 416, 809, 869, 882, 1206
DpnI GATC 8 cut(s) 14, 72, 470, 555, 1283, 1296, 1371, 1392
DpnII GATC 8 cut(s) 12, 70, 468, 553, 1281, 1294, 1369, 1390
EaeI YGGCCR 1 cut(s) 428
Eam1104I CTCTTC 4 cut(s) 309, 600, 969, 1128
EarI CTCTTC 4 cut(s) 309, 600, 969, 1128
EciI GGCGGA 1 cut(s) 666
Ecl136II GAGCTC 1 cut(s) 890
Eco130I CCWWGG 2 cut(s) 516, 638
Eco24I GRGCYC 1 cut(s) 892
Eco31I GGTCTC 1 cut(s) 1406
Eco32I GATATC 1 cut(s) 1075
Eco47I GGWCC 1 cut(s) 1343
Eco53kI GAGCTC 1 cut(s) 890
Eco57I CTGAAG 2 cut(s) 99, 624
EcoICRI GAGCTC 1 cut(s) 890
EcoNI CCTNNNNNAGG 1 cut(s) 1311
EcoRII CCWGG 1 cut(s) 861
EcoRV GATATC 1 cut(s) 1075
EcoT14I CCWWGG 2 cut(s) 516, 638
EcoT22I ATGCAT 1 cut(s) 208
EcoT38I GRGCYC 1 cut(s) 892
ErhI CCWWGG 2 cut(s) 516, 638
FaeI CATG 6 cut(s) 331, 764, 776, 1102, 1234, 1288
FalI AAGNNNNNCTT 2 cut(s) 375, 407
FaqI GGGAC 1 cut(s) 602
FatI CATG 6 cut(s) 327, 760, 772, 1098, 1230, 1284
FauI CCCGC 1 cut(s) 981
FauNDI CATATG 1 cut(s) 208
FbaI TGATCA 2 cut(s) 468, 1369
FblI GTMKAC 3 cut(s) 713, 1182, 1211
Fnu4HI GCNGC 7 cut(s) 6, 387, 423, 611, 654, 915, 918
FokI GGATG 5 cut(s) 538, 547, 1004, 1247, 1388
FriOI GRGCYC 1 cut(s) 892
Fsp4HI GCNGC 7 cut(s) 6, 387, 423, 611, 654, 915, 918
FspBI CTAG 4 cut(s) 639, 782, 909, 1047
GlaI GCGC 1 cut(s) 1223
GluI GCNGC 7 cut(s) 6, 387, 423, 611, 654, 915, 918
GsuI CTGGAG 1 cut(s) 688
HaeIII GGCC 2 cut(s) 430, 643
HapII CCGG 3 cut(s) 164, 644, 1358
HhaI GCGC 1 cut(s) 1224
Hin1I GRCGYC 1 cut(s) 491
Hin1II CATG 6 cut(s) 331, 764, 776, 1102, 1234, 1288
Hin6I GCGC 1 cut(s) 1222
HinP1I GCGC 1 cut(s) 1222
HincII GTYRAC 1 cut(s) 1029
HindII GTYRAC 1 cut(s) 1029
HinfI GANTC 6 cut(s) 169, 458, 764, 997, 1050, 1148
HpaII CCGG 3 cut(s) 164, 644, 1358
HphI GGTGA 3 cut(s) 658, 752, 950
Hpy166II GTNNAC 5 cut(s) 714, 1029, 1183, 1200, 1212
Hpy188I TCNGA 5 cut(s) 12, 594, 604, 885, 1347
Hpy188III TCNNGA 8 cut(s) 392, 697, 926, 1004, 1070, 1285, 1373, 1403
Hpy8I GTNNAC 5 cut(s) 714, 1029, 1183, 1200, 1212
Hpy99I CGWCG 2 cut(s) 1005, 1409
HpyAV CCTTC 6 cut(s) 131, 346, 731, 835, 1017, 1423
HpyCH4III ACNGT 3 cut(s) 95, 265, 693
HpyCH4IV ACGT 1 cut(s) 491
HpyCH4V TGCA 6 cut(s) 206, 349, 425, 752, 772, 896
HpyF10VI GCNNNNNNNGC 2 cut(s) 887, 914
HpyF3I CTNAG 6 cut(s) 180, 416, 809, 869, 882, 1206
HpySE526I ACGT 1 cut(s) 491
Hsp92I GRCGYC 1 cut(s) 491
Hsp92II CATG 6 cut(s) 331, 764, 776, 1102, 1234, 1288
HspAI GCGC 1 cut(s) 1222
Ksp22I TGATCA 2 cut(s) 468, 1369
Kzo9I GATC 8 cut(s) 12, 70, 468, 553, 1281, 1294, 1369, 1390
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 2 cut(s) 844, 865
Lsp1109I GCAGC 4 cut(s) 373, 409, 901, 904
LweI GCATC 3 cut(s) 193, 336, 1231
MaeI CTAG 4 cut(s) 639, 782, 909, 1047
MaeII ACGT 1 cut(s) 491
MaeIII GTNAC 3 cut(s) 146, 335, 1051
MalI GATC 8 cut(s) 14, 72, 470, 555, 1283, 1296, 1371, 1392
MboI GATC 8 cut(s) 12, 70, 468, 553, 1281, 1294, 1369, 1390
MflI RGATCY 1 cut(s) 553
MhlI GDGCHC 1 cut(s) 892
MluCI AATT 2 cut(s) 297, 1086
MlyI GAGTC 4 cut(s) 452, 758, 1059, 1142
MmeI TCCRAC 3 cut(s) 117, 1096, 1254
Mph1103I ATGCAT 1 cut(s) 208
MseI TTAA 5 cut(s) 237, 288, 405, 804, 1380
MslI CAYNNNNRTG 2 cut(s) 585, 759
MspCI CTTAAG 1 cut(s) 287
MspI CCGG 3 cut(s) 164, 644, 1358
MspR9I CCNGG 2 cut(s) 164, 863
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 1 cut(s) 863
MvnI CGCG 2 cut(s) 735, 1222
MwoI GCNNNNNNNGC 2 cut(s) 887, 914
NciI CCSGG 1 cut(s) 164
NdeI CATATG 1 cut(s) 208
NdeII GATC 8 cut(s) 12, 70, 468, 553, 1281, 1294, 1369, 1390
NlaIII CATG 6 cut(s) 331, 764, 776, 1102, 1234, 1288
NlaIV GGNNCC 2 cut(s) 514, 555
NmuCI GTSAC 3 cut(s) 146, 335, 1051
NsiI ATGCAT 1 cut(s) 208
NspI RCATGY 2 cut(s) 331, 776
OliI CACNNNNGTG 1 cut(s) 585
PagI TCATGA 1 cut(s) 1284
PciI ACATGT 1 cut(s) 327
PciSI GCTCTTC 1 cut(s) 600
PctI GAATGC 1 cut(s) 500
PfeI GAWTC 2 cut(s) 169, 997
PfoI TCCNGGA 1 cut(s) 162
PinAI ACCGGT 1 cut(s) 1357
PkrI GCNGC 7 cut(s) 7, 388, 424, 612, 655, 916, 919
PleI GAGTC 4 cut(s) 452, 758, 1058, 1142
PpsI GAGTC 4 cut(s) 452, 758, 1058, 1142
PscI ACATGT 1 cut(s) 327
Psp124BI GAGCTC 1 cut(s) 892
Psp6I CCWGG 1 cut(s) 861
PspGI CCWGG 1 cut(s) 861
PspN4I GGNNCC 2 cut(s) 514, 555
PspPI GGNCC 1 cut(s) 1343
PstNI CAGNNNCTG 1 cut(s) 868
PsuI RGATCY 1 cut(s) 553
RsaI GTAC 4 cut(s) 185, 476, 1175, 1229
RsaNI GTAC 4 cut(s) 184, 475, 1174, 1228
RseI CAYNNNNRTG 2 cut(s) 585, 759
SacI GAGCTC 1 cut(s) 892
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 5 cut(s) 237, 288, 405, 804, 1380
SatI GCNGC 7 cut(s) 6, 387, 423, 611, 654, 915, 918
Sau3AI GATC 8 cut(s) 12, 70, 468, 553, 1281, 1294, 1369, 1390
Sau96I GGNCC 1 cut(s) 1343
SchI GAGTC 4 cut(s) 452, 758, 1059, 1142
ScrFI CCNGG 2 cut(s) 164, 863
SduI GDGCHC 1 cut(s) 892
SfaNI GCATC 3 cut(s) 193, 336, 1231
SinI GGWCC 1 cut(s) 1343
SmiMI CAYNNNNRTG 2 cut(s) 585, 759
SmlI CTYRAG 2 cut(s) 287, 392
SmoI CTYRAG 2 cut(s) 287, 392
SpeI ACTAGT 1 cut(s) 781
Sse9I AATT 2 cut(s) 297, 1086
SsiI CCGC 6 cut(s) 5, 153, 611, 653, 677, 988
SspMI CTAG 4 cut(s) 639, 782, 909, 1047
SstI GAGCTC 1 cut(s) 892
StyD4I CCNGG 2 cut(s) 162, 861
StyI CCWWGG 2 cut(s) 516, 638
TaaI ACNGT 3 cut(s) 95, 265, 693
TaiI ACGT 1 cut(s) 494
TaqI TCGA 4 cut(s) 38, 461, 1003, 1404
TasI AATT 2 cut(s) 297, 1086
TatI WGTACW 3 cut(s) 474, 1173, 1227
TauI GCSGC 3 cut(s) 8, 613, 656
TfiI GAWTC 2 cut(s) 169, 997
Tru1I TTAA 5 cut(s) 237, 288, 405, 804, 1380
Tru9I TTAA 5 cut(s) 237, 288, 405, 804, 1380
TscAI CASTG 3 cut(s) 501, 627, 1084
TseFI GTSAC 3 cut(s) 146, 335, 1051
TseI GCWGC 4 cut(s) 386, 422, 914, 917
Tsp45I GTSAC 3 cut(s) 146, 335, 1051
TspDTI ATGAA 5 cut(s) 161, 327, 978, 1301, 1439
TspGWI ACGGA 2 cut(s) 134, 1269
TspRI CASTG 3 cut(s) 501, 627, 1084
Vha464I CTTAAG 1 cut(s) 287
VpaK11BI GGWCC 1 cut(s) 1343
XagI CCTNNNNNAGG 1 cut(s) 1311
XceI RCATGY 2 cut(s) 331, 776
XmaJI CCTAGG 1 cut(s) 638
XmiI GTMKAC 3 cut(s) 713, 1182, 1211
XspI CTAG 4 cut(s) 639, 782, 909, 1047
ZraI GACGTC 1 cut(s) 492
Zsp2I ATGCAT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.