Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008772

Physical Location & Seq

Genomic Coordinates Forward (+)

53183833 .. 53189531

Gene Structure 5699 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014439

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGAAGCTTGCTCCTTGCAGTCACCAACTGTAACCACCATACCCTCCTCTTTATCTCATAATGGGTTTAAAGAACAGCCTTTTCTACGTAGTCAGGTCCTCAAGATTTCTAATTCAAAGAGGCACCCACATGTCAGGAAGCTAGGATTTCTTCATATCAAAGCTCAAGCCTCAGGCACAACGAATTCCAGCTCAGAGATAGTTGAGGAGGTTACGGGAAGAGTAGGTCTGAAAGATGAGAATGTGGTATTTGTCGCTGGTGCTACTGGTAAAGTTGGTTCACGAGCAGTAAGGGAGCTTTTGAAACTTGGGTTTCAAGTCAGAGCTGGCGTCAGGAGTGCTCAGAGAGCAGCCACCCTTGTAGAAAGTGTTAAGCAAATGAAGCTTGATGTTGAAAGTGCAAGCCAAGGAAGCCAACCTGTAGAAAAGCTTGAAATTGTGGAGTGCGACTTAGAGAAACAAGATCAGATTGGACCAGCATTGGGAACTGCATCAGTAGTCTTGTGCTGTATTGGTGCAAGCGAGAAGGAGATTTTTGATATCACTGGACCATATCGGATTGACTATCTGGCTACAAAAAATCTTATTGAGGCAGCAACCGTTGCAAAAGTTAACCACTTCATATTGCTCACATCTCTGGGAACAAACAAAATTGGATTTCCCGCAGCTATTCTGAATTTATTTTGGGGCGTCCTGATTTGGAAAAGAAAGGCTGAAGAGGCACTGATAGCCAGTGGACTTCCCTACACTATAGTGAGACCTGGTGGAATGGAACGGCCCACTGATGCTTACAAGGAAACTCATAATATTACTCTCTCAACGGAGGATACTTTATTCGGTGGTCAAGTGTCGAACCTGCAGGTAGCAGAGCTCATGGCATGCATTGCCAAAAATCCTGGCCTTTCTTTCTTCAAAGTTGTTGAAGTAGTTGCAGAAACAACTGTTCCATTGACTCCTCTGGAGGAACTTCTGGCAAAGATACCATCTCAACGCGCTGACATATACTCACCAAAGGAATTTGGTGGTGGTGGTGGTGGTGCTGCTGCTGCTTCTGATCCAGAACCTTCTAAGATTGCCACATCTGAGAAACCAAGCACTCCCATTGAGAAAGAAACGGCAAAAGAAGAAGTGCTGGCAAAACAGCCATCATCTCCTTATATTGCCTATGAAGATTTGAAGCCACCAACATCTCCTACTCCAACACCAAGTGGTCCCAAACAAATTCCTCCAGATGCCTCTGCATCAGTAGAAGTTACCTCAGCACCAGTAGAAGTTGCATCACAACCAAGTGGAGGTAATGATGTGATAGAGGCTATCACAAGCAGTGTTTCTGAAAAGGTTTCTCCTCAGAAATCAACTCATAGCCATTCACCCTACCATGTTTATGAGGATTTCAAGCCACCTAGTTCTCCAAGCCCAACGCCTGCTGCCCCCAAAAAAATTCCTCTGGATTCCTCACCACCAGTACAAGCTTCCTCAACATCGGTAGAAGTTGTATCACAATCAAGTGGAGGCAATGATGTTATTTCTGTTTCTTCCCAGAATCCCACTCATAGCCATTCACCCTATCATGCATATGACAACTTCAAGCCCCCTTCATCACCATCTCCTAGTCCTCCAACCACATCACTCCTTTCAACACCCGCTGCAGATAATGGATCTCAACCGGGTACCTTGTCAGTCAACAGCACAGTGAAAATTCCAACAGAAAATATGCAAACTGACACAGACCAATATACCGAACCGAAGCCAAAACCACAATCGCCTTTCACTATGTATGAGGACTTAAAGCCTCCAGCATCGCCAATACCATCCCCAAAGAAATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009941 GO:0016020 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032991 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0098796 GO:0098807

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAD_binding_10

Protein Analysis

610

Amino Acids

64.64

Weight (kDa)

5.92

Isoelectric Point (pI)

57.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NmrA	PF05368	81 - 250	6.3e-12	NmrA-like family
Epimerase	PF01370	83 - 212	2.4e-06	NAD dependent epimerase/dehydratase family
NAD_binding_10	PF13460	87 - 136	1.1e-06	NAD(P)H-binding
NAD_binding_10	PF13460	142 - 299	6e-25	NAD(P)H-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008772)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18890
fragaria_vesca	FvH4_2g07870 FvH4_2g07870 FvH4_2g07870 FvH4_2g07870 FvH4_2g07870 FvH4_2g07870 FvH4_2g07870
malus_domestica	MD10G1083200.v1.1
prunus_persica	Prupe.8G106300_v2.0.a1 Prupe.8G106300_v2.0.a1
pyrus_communis	pycom10g06530
rosa_chinensis	RchiOBHm_Chr6g0262291
rosa_laevigata	RLG00000014439
rosa_multiflora	Rmu_sc0002510.1_g000032
rosa_rugosa	Rorug05G0596200 Rorug05G0596200 Rorug05G0596300
rosa_samantha	Rh6AG116500 Rh6BG110700 Rh6CG108100 Rh6DG098500
rosa_wichuraiana	Rw6G010120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	850, 864
Acc65I	GGTACC	1 cut(s)	1670
AccB1I	GGYRCC	2 cut(s)	123, 1670
AccII	CGCG	1 cut(s)	993
AciI	CCGC	2 cut(s)	663, 1644
AclWI	GGATC	2 cut(s)	1049, 1666
AcsI	RAATTY	7 cut(s)	184, 676, 1016, 1221, 1440, 1698, 1823
AcuI	CTGAAG	1 cut(s)	735
AcyI	GRCGYC	2 cut(s)	330, 690
AdeI	CACNNNGTG	1 cut(s)	1208
AfaI	GTAC	2 cut(s)	1467, 1672
AfiI	CCNNNNNNNGG	2 cut(s)	482, 1292
AflIII	ACRYGT	1 cut(s)	130
AjnI	CCWGG	2 cut(s)	760, 895
AleI	CACNNNNGTG	1 cut(s)	752
Alw21I	GWGCWC	2 cut(s)	343, 873
Alw26I	GTCTC	1 cut(s)	751
AlwI	GGATC	2 cut(s)	1049, 1666
AoxI	GGCC	2 cut(s)	776, 898
ApeKI	GCWGC	8 cut(s)	350, 593, 665, 1040, 1043, 1046, 1427, 1646
ApoI	RAATTY	7 cut(s)	184, 676, 1016, 1221, 1440, 1698, 1823
Asp718I	GGTACC	1 cut(s)	1670
AspLEI	GCGC	1 cut(s)	995
AspS9I	GGNCC	5 cut(s)	97, 473, 548, 777, 1211
AsuC2I	CCSGG	1 cut(s)	1668
AsuHPI	GGTGA	6 cut(s)	15, 999, 1362, 1449, 1554, 1593
AvaII	GGWCC	4 cut(s)	97, 473, 548, 1211
AxyI	CCTNAGG	1 cut(s)	172
BanI	GGYRCC	2 cut(s)	123, 1670
BanII	GRGCYC	1 cut(s)	873
BauI	CACGAG	1 cut(s)	282
Bbv12I	GWGCWC	2 cut(s)	343, 873
BbvCI	CCTCAGC	1 cut(s)	1258
BbvI	GCAGC	8 cut(s)	362, 605, 677, 1027, 1030, 1033, 1414, 1633
BccI	CCATC	4 cut(s)	991, 1153, 1612, 1819
BceAI	ACGGC	2 cut(s)	791, 1131
BciT130I	CCWGG	2 cut(s)	762, 897
BciVI	GTATCC	1 cut(s)	820
BcnI	CCSGG	1 cut(s)	1668
BcoDI	GTCTC	1 cut(s)	751
BfaI	CTAG	4 cut(s)	143, 1404, 1611, 1828
BfmI	CTRYAG	4 cut(s)	420, 750, 857, 1647
BfuAI	ACCTGC	2 cut(s)	850, 864
BfuI	GTATCC	1 cut(s)	820
BisI	GCNGC	8 cut(s)	351, 594, 666, 1041, 1044, 1047, 1428, 1647
BlsI	GCNGC	8 cut(s)	352, 595, 667, 1042, 1045, 1048, 1429, 1648
Bme1390I	CCNGG	3 cut(s)	762, 897, 1668
Bme18I	GGWCC	4 cut(s)	97, 473, 548, 1211
BmgT120I	GGNCC	5 cut(s)	97, 473, 548, 777, 1211
BmiI	GGNNCC	3 cut(s)	125, 1213, 1672
BmrFI	CCNGG	3 cut(s)	762, 897, 1668
BmsI	GCATC	6 cut(s)	500, 775, 1222, 1250, 1286, 1808
BpmI	CTGGAG	3 cut(s)	980, 1212, 1779
Bpu10I	CCTNAGC	1 cut(s)	1258
BpuEI	CTTGAG	2 cut(s)	86, 150
BpuMI	CCSGG	1 cut(s)	1668
BsaAI	YACGTR	1 cut(s)	89
BsaHI	GRCGYC	2 cut(s)	330, 690
BsaI	GGTCTC	1 cut(s)	751
BsaJI	CCNNGG	1 cut(s)	406
Bsc4I	CCNNNNNNNGG	2 cut(s)	482, 1292
Bse1I	ACTGG	5 cut(s)	271, 550, 732, 1265, 1463
Bse21I	CCTNAGG	1 cut(s)	172
Bse3DI	GCAATG	2 cut(s)	882, 1522
BseBI	CCWGG	2 cut(s)	762, 897
BseDI	CCNNGG	1 cut(s)	406
BseGI	GGATG	1 cut(s)	1811
BseLI	CCNNNNNNNGG	2 cut(s)	482, 1292
BseMI	GCAATG	2 cut(s)	882, 1522
BseMII	CTCAG	6 cut(s)	186, 207, 356, 1074, 1272, 1361
BseNI	ACTGG	5 cut(s)	271, 550, 732, 1265, 1463
BseRI	GAGGAG	4 cut(s)	37, 221, 945, 1335
BseXI	GCAGC	8 cut(s)	362, 605, 677, 1027, 1030, 1033, 1414, 1633
Bsh1236I	CGCG	1 cut(s)	993
BshFI	GGCC	2 cut(s)	778, 900
BshNI	GGYRCC	2 cut(s)	123, 1670
BsiHKAI	GWGCWC	2 cut(s)	343, 873
BsiSI	CCGG	1 cut(s)	1667
BslFI	GGGAC	1 cut(s)	1197
BslI	CCNNNNNNNGG	2 cut(s)	482, 1292
BsmAI	GTCTC	1 cut(s)	751
BsmFI	GGGAC	1 cut(s)	1197
BsnI	GGCC	2 cut(s)	778, 900
Bso31I	GGTCTC	1 cut(s)	751
Bsp1286I	GDGCHC	2 cut(s)	343, 873
Bsp143I	GATC	3 cut(s)	463, 1054, 1658
BspACI	CCGC	2 cut(s)	663, 1644
BspANI	GGCC	2 cut(s)	778, 900
BspCNI	CTCAG	6 cut(s)	185, 206, 355, 1075, 1271, 1360
BspFNI	CGCG	1 cut(s)	993
BspLI	GGNNCC	3 cut(s)	125, 1213, 1672
BspMAI	CTGCAG	2 cut(s)	861, 1651
BspMI	ACCTGC	2 cut(s)	850, 864
BspPI	GGATC	2 cut(s)	1049, 1666
BspT107I	GGYRCC	2 cut(s)	123, 1670
BspTNI	GGTCTC	1 cut(s)	751
BsrDI	GCAATG	2 cut(s)	882, 1522
BsrI	ACTGG	5 cut(s)	271, 550, 732, 1265, 1463
BssECI	CCNNGG	1 cut(s)	406
BssMI	GATC	3 cut(s)	463, 1054, 1658
BssNI	GRCGYC	2 cut(s)	330, 690
BssSI	CACGAG	1 cut(s)	282
BssT1I	CCWWGG	1 cut(s)	406
Bst2BI	CACGAG	1 cut(s)	282
Bst2UI	CCWGG	2 cut(s)	762, 897
Bst4CI	ACNGT	4 cut(s)	31, 601, 943, 1693
Bst6I	CTCTTC	2 cut(s)	214, 711
BstACI	GRCGYC	2 cut(s)	330, 690
BstAPI	GCANNNNNTGC	2 cut(s)	602, 884
BstBAI	YACGTR	1 cut(s)	89
BstC8I	GCNNGC	7 cut(s)	10, 328, 403, 520, 880, 1134, 1425
BstDEI	CTNAG	8 cut(s)	172, 193, 342, 451, 1068, 1083, 1258, 1347
BstF5I	GGATG	1 cut(s)	1811
BstFNI	CGCG	1 cut(s)	993
BstHHI	GCGC	1 cut(s)	995
BstKTI	GATC	3 cut(s)	466, 1057, 1661
BstMAI	GTCTC	1 cut(s)	751
BstMBI	GATC	3 cut(s)	463, 1054, 1658
BstMWI	GCNNNNNNNGC	8 cut(s)	347, 382, 411, 602, 719, 728, 884, 1046
BstNI	CCWGG	2 cut(s)	762, 897
BstNSI	RCATGY	2 cut(s)	134, 882
BstSCI	CCNGG	3 cut(s)	760, 895, 1666
BstSFI	CTRYAG	4 cut(s)	420, 750, 857, 1647
BstSNI	TACGTA	1 cut(s)	89
BstUI	CGCG	1 cut(s)	993
BstV1I	GCAGC	8 cut(s)	362, 605, 677, 1027, 1030, 1033, 1414, 1633
BstX2I	RGATCY	1 cut(s)	1658
BstYI	RGATCY	1 cut(s)	1658
Bsu36I	CCTNAGG	1 cut(s)	172
BsuI	GTATCC	1 cut(s)	820
BsuRI	GGCC	2 cut(s)	778, 900
BtgZI	GCGATG	1 cut(s)	1785
BtsCI	GGATG	1 cut(s)	1811
BtsI	GCAGTG	1 cut(s)	1330
BtsIMutI	CAGTG	6 cut(s)	543, 722, 739, 780, 1330, 1698
BveI	ACCTGC	2 cut(s)	850, 864
Cac8I	GCNNGC	7 cut(s)	10, 328, 403, 520, 880, 1134, 1425
CfoI	GCGC	1 cut(s)	995
Cfr13I	GGNCC	5 cut(s)	97, 473, 548, 777, 1211
CseI	GACGC	2 cut(s)	319, 679
CsiI	ACCWGGT	1 cut(s)	760
Csp6I	GTAC	2 cut(s)	1466, 1671
CviAII	CATG	5 cut(s)	131, 874, 879, 1379, 1571
CviQI	GTAC	2 cut(s)	1466, 1671
DdeI	CTNAG	8 cut(s)	172, 193, 342, 451, 1068, 1083, 1258, 1347
DpnI	GATC	3 cut(s)	465, 1056, 1660
DpnII	GATC	3 cut(s)	463, 1054, 1658
DraI	TTTAAA	1 cut(s)	70
DraIII	CACNNNGTG	1 cut(s)	1208
Eam1104I	CTCTTC	2 cut(s)	214, 711
EarI	CTCTTC	2 cut(s)	214, 711
Ecl136II	GAGCTC	1 cut(s)	871
Eco105I	TACGTA	1 cut(s)	89
Eco130I	CCWWGG	1 cut(s)	406
Eco24I	GRGCYC	1 cut(s)	873
Eco31I	GGTCTC	1 cut(s)	751
Eco32I	GATATC	1 cut(s)	541
Eco47I	GGWCC	4 cut(s)	97, 473, 548, 1211
Eco53kI	GAGCTC	1 cut(s)	871
Eco57I	CTGAAG	1 cut(s)	735
Eco81I	CCTNAGG	1 cut(s)	172
EcoICRI	GAGCTC	1 cut(s)	871
EcoO109I	RGGNCCY	1 cut(s)	97
EcoRI	GAATTC	1 cut(s)	184
EcoRII	CCWGG	2 cut(s)	760, 895
EcoRV	GATATC	1 cut(s)	541
EcoT14I	CCWWGG	1 cut(s)	406
EcoT22I	ATGCAT	2 cut(s)	884, 1576
EcoT38I	GRGCYC	1 cut(s)	873
ErhI	CCWWGG	1 cut(s)	406
FaeI	CATG	5 cut(s)	134, 877, 882, 1382, 1574
FaqI	GGGAC	1 cut(s)	1197
FatI	CATG	5 cut(s)	130, 873, 878, 1378, 1570
FauI	CCCGC	2 cut(s)	670, 1651
FauNDI	CATATG	1 cut(s)	1576
Fnu4HI	GCNGC	8 cut(s)	351, 594, 666, 1041, 1044, 1047, 1428, 1647
FokI	GGATG	1 cut(s)	1798
FriOI	GRGCYC	1 cut(s)	873
Fsp4HI	GCNGC	8 cut(s)	351, 594, 666, 1041, 1044, 1047, 1428, 1647
FspBI	CTAG	4 cut(s)	143, 1404, 1611, 1828
GlaI	GCGC	1 cut(s)	994
GluI	GCNGC	8 cut(s)	351, 594, 666, 1041, 1044, 1047, 1428, 1647
GsuI	CTGGAG	3 cut(s)	980, 1212, 1779
HaeIII	GGCC	2 cut(s)	778, 900
HapII	CCGG	1 cut(s)	1667
HgaI	GACGC	2 cut(s)	319, 679
HhaI	GCGC	1 cut(s)	995
Hin1I	GRCGYC	2 cut(s)	330, 690
Hin1II	CATG	5 cut(s)	134, 877, 882, 1382, 1574
Hin6I	GCGC	1 cut(s)	993
HinP1I	GCGC	1 cut(s)	993
HincII	GTYRAC	2 cut(s)	613, 1684
HindII	GTYRAC	2 cut(s)	613, 1684
HindIII	AAGCTT	4 cut(s)	6, 383, 428, 1470
HinfI	GANTC	3 cut(s)	952, 1451, 1543
HpaI	GTTAAC	1 cut(s)	613
HpaII	CCGG	1 cut(s)	1667
HphI	GGTGA	6 cut(s)	15, 999, 1362, 1449, 1554, 1593
Hpy166II	GTNNAC	4 cut(s)	281, 613, 737, 1684
Hpy188III	TCNNGA	9 cut(s)	103, 136, 282, 334, 694, 959, 1058, 1229, 1448
Hpy8I	GTNNAC	4 cut(s)	281, 613, 737, 1684
HpyAV	CCTTC	3 cut(s)	520, 1074, 1605
HpyCH4III	ACNGT	4 cut(s)	31, 601, 943, 1693
HpyCH4IV	ACGT	1 cut(s)	88
HpyF10VI	GCNNNNNNNGC	8 cut(s)	347, 382, 411, 602, 719, 728, 884, 1046
HpyF3I	CTNAG	8 cut(s)	172, 193, 342, 451, 1068, 1083, 1258, 1347
HpySE526I	ACGT	1 cut(s)	88
Hsp92I	GRCGYC	2 cut(s)	330, 690
Hsp92II	CATG	5 cut(s)	134, 877, 882, 1382, 1574
HspAI	GCGC	1 cut(s)	993
KpnI	GGTACC	1 cut(s)	1674
KspAI	GTTAAC	1 cut(s)	613
Kzo9I	GATC	3 cut(s)	463, 1054, 1658
LmnI	GCTCC	2 cut(s)	17, 295
Lsp1109I	GCAGC	8 cut(s)	362, 605, 677, 1027, 1030, 1033, 1414, 1633
LweI	GCATC	6 cut(s)	500, 775, 1222, 1250, 1286, 1808
MabI	ACCWGGT	1 cut(s)	760
MaeI	CTAG	4 cut(s)	143, 1404, 1611, 1828
MaeII	ACGT	1 cut(s)	88
MaeIII	GTNAC	4 cut(s)	21, 31, 211, 1252
MalI	GATC	3 cut(s)	465, 1056, 1660
MboI	GATC	3 cut(s)	463, 1054, 1658
MboII	GAAGA	7 cut(s)	143, 231, 728, 901, 1136, 1181, 1527
MflI	RGATCY	1 cut(s)	1658
MhlI	GDGCHC	2 cut(s)	343, 873
MlyI	GAGTC	1 cut(s)	946
MmeI	TCCRAC	3 cut(s)	1223, 1643, 1727
Mph1103I	ATGCAT	2 cut(s)	884, 1576
MseI	TTAA	4 cut(s)	69, 372, 612, 1787
MslI	CAYNNNNRTG	4 cut(s)	129, 752, 1383, 1575
MspA1I	CMGCKG	1 cut(s)	1646
MspI	CCGG	1 cut(s)	1667
MspR9I	CCNGG	3 cut(s)	762, 897, 1668
MvaI	CCWGG	2 cut(s)	762, 897
MvnI	CGCG	1 cut(s)	993
MwoI	GCNNNNNNNGC	8 cut(s)	347, 382, 411, 602, 719, 728, 884, 1046
NciI	CCSGG	1 cut(s)	1668
NdeI	CATATG	1 cut(s)	1576
NdeII	GATC	3 cut(s)	463, 1054, 1658
NlaIII	CATG	5 cut(s)	134, 877, 882, 1382, 1574
NlaIV	GGNNCC	3 cut(s)	125, 1213, 1672
NmuCI	GTSAC	1 cut(s)	21
NsiI	ATGCAT	2 cut(s)	884, 1576
NspI	RCATGY	2 cut(s)	134, 882
OliI	CACNNNNGTG	1 cut(s)	752
PaeI	GCATGC	1 cut(s)	882
PciI	ACATGT	1 cut(s)	130
PfeI	GAWTC	2 cut(s)	1451, 1543
PkrI	GCNGC	8 cut(s)	352, 595, 667, 1042, 1045, 1048, 1429, 1648
PleI	GAGTC	1 cut(s)	946
PpsI	GAGTC	1 cut(s)	946
Ppu21I	YACGTR	1 cut(s)	89
PpuMI	RGGWCCY	1 cut(s)	97
PscI	ACATGT	1 cut(s)	130
Psp124BI	GAGCTC	1 cut(s)	873
Psp5II	RGGWCCY	1 cut(s)	97
Psp6I	CCWGG	2 cut(s)	760, 895
PspGI	CCWGG	2 cut(s)	760, 895
PspN4I	GGNNCC	3 cut(s)	125, 1213, 1672
PspPI	GGNCC	5 cut(s)	97, 473, 548, 777, 1211
PspPPI	RGGWCCY	1 cut(s)	97
PsrI	GAACNNNNNNTAC	2 cut(s)	262, 294
PstI	CTGCAG	2 cut(s)	861, 1651
PsuI	RGATCY	1 cut(s)	1658
RsaI	GTAC	2 cut(s)	1467, 1672
RsaNI	GTAC	2 cut(s)	1466, 1671
RseI	CAYNNNNRTG	4 cut(s)	129, 752, 1383, 1575
SacI	GAGCTC	1 cut(s)	873
SaqAI	TTAA	4 cut(s)	69, 372, 612, 1787
SatI	GCNGC	8 cut(s)	351, 594, 666, 1041, 1044, 1047, 1428, 1647
Sau3AI	GATC	3 cut(s)	463, 1054, 1658
Sau96I	GGNCC	5 cut(s)	97, 473, 548, 777, 1211
SbfI	CCTGCAGG	1 cut(s)	861
SchI	GAGTC	1 cut(s)	946
ScrFI	CCNGG	3 cut(s)	762, 897, 1668
SdaI	CCTGCAGG	1 cut(s)	861
SduI	GDGCHC	2 cut(s)	343, 873
SexAI	ACCWGGT	1 cut(s)	760
SfaNI	GCATC	6 cut(s)	500, 775, 1222, 1250, 1286, 1808
SfcI	CTRYAG	4 cut(s)	420, 750, 857, 1647
SinI	GGWCC	4 cut(s)	97, 473, 548, 1211
SmiMI	CAYNNNNRTG	4 cut(s)	129, 752, 1383, 1575
SmlI	CTYRAG	2 cut(s)	101, 165
SmoI	CTYRAG	2 cut(s)	101, 165
SnaBI	TACGTA	1 cut(s)	89
SphI	GCATGC	1 cut(s)	882
Sse8387I	CCTGCAGG	1 cut(s)	861
SsiI	CCGC	2 cut(s)	663, 1644
SspI	AATATT	1 cut(s)	808
SspMI	CTAG	4 cut(s)	143, 1404, 1611, 1828
SstI	GAGCTC	1 cut(s)	873
StyD4I	CCNGG	3 cut(s)	760, 895, 1666
StyI	CCWWGG	1 cut(s)	406
TaaI	ACNGT	4 cut(s)	31, 601, 943, 1693
TaiI	ACGT	1 cut(s)	91
TaqI	TCGA	1 cut(s)	851
TatI	WGTACW	1 cut(s)	1465
TfiI	GAWTC	2 cut(s)	1451, 1543
Tru1I	TTAA	4 cut(s)	69, 372, 612, 1787
Tru9I	TTAA	4 cut(s)	69, 372, 612, 1787
TscAI	CASTG	6 cut(s)	550, 729, 739, 787, 1330, 1698
TseFI	GTSAC	1 cut(s)	21
TseI	GCWGC	8 cut(s)	350, 593, 665, 1040, 1043, 1046, 1427, 1646
Tsp45I	GTSAC	1 cut(s)	21
TspDTI	ATGAA	5 cut(s)	143, 395, 610, 1182, 1587
TspGWI	ACGGA	1 cut(s)	836
TspRI	CASTG	6 cut(s)	550, 729, 739, 787, 1330, 1698
VpaK11BI	GGWCC	4 cut(s)	97, 473, 548, 1211
XapI	RAATTY	7 cut(s)	184, 676, 1016, 1221, 1440, 1698, 1823
XceI	RCATGY	2 cut(s)	134, 882
XspI	CTAG	4 cut(s)	143, 1404, 1611, 1828
Zsp2I	ATGCAT	2 cut(s)	884, 1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.