Polyadenylate-binding protein-interacting protein 11-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0352911 RchiOBHm_Chr1g0352921 RchiOBHm_Chr6g0246511 |
| rosa_laevigata | RLG00000000775 RLG00000015251 |
| rosa_roxburghii | Rroxscaffold_3G00221210 Rroxscaffold_7G00214550 |
| rosa_rugosa | Rorug01G0243900.1 Rorug01G0244100 |
| rosa_samantha | Rh4CG230600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 32 |
| AclI | AACGTT | 1 cut(s) | 182 |
| AcsI | RAATTY | 3 cut(s) | 50, 67, 241 |
| AcuI | CTGAAG | 1 cut(s) | 219 |
| AfaI | GTAC | 2 cut(s) | 231, 238 |
| AgsI | TTSAA | 1 cut(s) | 287 |
| AluBI | AGCT | 3 cut(s) | 161, 266, 277 |
| AluI | AGCT | 3 cut(s) | 161, 266, 277 |
| Alw26I | GTCTC | 2 cut(s) | 45, 298 |
| AoxI | GGCC | 1 cut(s) | 366 |
| ApoI | RAATTY | 3 cut(s) | 50, 67, 241 |
| AspS9I | GGNCC | 1 cut(s) | 367 |
| AsuHPI | GGTGA | 1 cut(s) | 21 |
| BcoDI | GTCTC | 2 cut(s) | 45, 298 |
| BfmI | CTRYAG | 1 cut(s) | 308 |
| BmgT120I | GGNCC | 1 cut(s) | 367 |
| BpuEI | CTTGAG | 1 cut(s) | 246 |
| BseMII | CTCAG | 1 cut(s) | 293 |
| BshFI | GGCC | 1 cut(s) | 368 |
| BslFI | GGGAC | 2 cut(s) | 132, 320 |
| BsmAI | GTCTC | 2 cut(s) | 45, 298 |
| BsmFI | GGGAC | 2 cut(s) | 132, 320 |
| BsnI | GGCC | 1 cut(s) | 368 |
| Bsp1407I | TGTACA | 2 cut(s) | 229, 236 |
| Bsp143I | GATC | 1 cut(s) | 26 |
| BspACI | CCGC | 1 cut(s) | 32 |
| BspANI | GGCC | 1 cut(s) | 368 |
| BspCNI | CTCAG | 1 cut(s) | 294 |
| BspMAI | CTGCAG | 1 cut(s) | 312 |
| BsrGI | TGTACA | 2 cut(s) | 229, 236 |
| BssMI | GATC | 1 cut(s) | 26 |
| Bst4CI | ACNGT | 2 cut(s) | 229, 236 |
| BstAUI | TGTACA | 2 cut(s) | 229, 236 |
| BstDEI | CTNAG | 2 cut(s) | 153, 302 |
| BstKTI | GATC | 1 cut(s) | 29 |
| BstMAI | GTCTC | 2 cut(s) | 45, 298 |
| BstMBI | GATC | 1 cut(s) | 26 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 31 |
| BstSFI | CTRYAG | 1 cut(s) | 308 |
| BsuRI | GGCC | 1 cut(s) | 368 |
| BtsIMutI | CAGTG | 1 cut(s) | 232 |
| Cfr13I | GGNCC | 1 cut(s) | 367 |
| Csp6I | GTAC | 2 cut(s) | 230, 237 |
| CviJI | RGCY | 5 cut(s) | 161, 266, 277, 363, 368 |
| CviKI_1 | RGCY | 5 cut(s) | 161, 266, 277, 363, 368 |
| CviQI | GTAC | 2 cut(s) | 230, 237 |
| DdeI | CTNAG | 2 cut(s) | 153, 302 |
| DpnI | GATC | 1 cut(s) | 28 |
| DpnII | GATC | 1 cut(s) | 26 |
| Eco32I | GATATC | 1 cut(s) | 316 |
| Eco57I | CTGAAG | 1 cut(s) | 219 |
| EcoRI | GAATTC | 1 cut(s) | 67 |
| EcoRV | GATATC | 1 cut(s) | 316 |
| FaqI | GGGAC | 2 cut(s) | 132, 320 |
| HaeIII | GGCC | 1 cut(s) | 368 |
| HincII | GTYRAC | 1 cut(s) | 175 |
| HindII | GTYRAC | 1 cut(s) | 175 |
| HinfI | GANTC | 3 cut(s) | 104, 131, 287 |
| HpaI | GTTAAC | 1 cut(s) | 175 |
| HphI | GGTGA | 1 cut(s) | 21 |
| Hpy166II | GTNNAC | 2 cut(s) | 175, 232 |
| Hpy188I | TCNGA | 5 cut(s) | 103, 111, 195, 303, 351 |
| Hpy8I | GTNNAC | 2 cut(s) | 175, 232 |
| HpyAV | CCTTC | 4 cut(s) | 25, 109, 159, 247 |
| HpyCH4III | ACNGT | 2 cut(s) | 229, 236 |
| HpyCH4IV | ACGT | 2 cut(s) | 182, 208 |
| HpyCH4V | TGCA | 4 cut(s) | 86, 167, 221, 310 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 31 |
| HpyF3I | CTNAG | 2 cut(s) | 153, 302 |
| HpySE526I | ACGT | 2 cut(s) | 182, 208 |
| KspAI | GTTAAC | 1 cut(s) | 175 |
| Kzo9I | GATC | 1 cut(s) | 26 |
| LpnPI | CCDG | 4 cut(s) | 57, 183, 296, 345 |
| MaeII | ACGT | 2 cut(s) | 182, 208 |
| MaeIII | GTNAC | 1 cut(s) | 5 |
| MalI | GATC | 1 cut(s) | 28 |
| MboI | GATC | 1 cut(s) | 26 |
| MboII | GAAGA | 2 cut(s) | 212, 341 |
| MluCI | AATT | 3 cut(s) | 50, 67, 241 |
| MmeI | TCCRAC | 1 cut(s) | 218 |
| MnlI | CCTC | 2 cut(s) | 132, 201 |
| MseI | TTAA | 3 cut(s) | 174, 273, 382 |
| MspA1I | CMGCKG | 1 cut(s) | 34 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 31 |
| NdeII | GATC | 1 cut(s) | 26 |
| PfeI | GAWTC | 3 cut(s) | 104, 131, 287 |
| Psp1406I | AACGTT | 1 cut(s) | 182 |
| PspPI | GGNCC | 1 cut(s) | 367 |
| PstI | CTGCAG | 1 cut(s) | 312 |
| RsaI | GTAC | 2 cut(s) | 231, 238 |
| RsaNI | GTAC | 2 cut(s) | 230, 237 |
| SaqAI | TTAA | 3 cut(s) | 174, 273, 382 |
| Sau3AI | GATC | 1 cut(s) | 26 |
| Sau96I | GGNCC | 1 cut(s) | 367 |
| SetI | ASST | 8 cut(s) | 163, 172, 185, 211, 258, 268, 279, 380 |
| SfcI | CTRYAG | 1 cut(s) | 308 |
| SmlI | CTYRAG | 1 cut(s) | 261 |
| SmoI | CTYRAG | 1 cut(s) | 261 |
| Sse9I | AATT | 3 cut(s) | 50, 67, 241 |
| SsiI | CCGC | 1 cut(s) | 32 |
| TaaI | ACNGT | 2 cut(s) | 229, 236 |
| TaiI | ACGT | 2 cut(s) | 185, 211 |
| TaqI | TCGA | 1 cut(s) | 327 |
| TasI | AATT | 3 cut(s) | 50, 67, 241 |
| TatI | WGTACW | 2 cut(s) | 229, 236 |
| TfiI | GAWTC | 3 cut(s) | 104, 131, 287 |
| Tru1I | TTAA | 3 cut(s) | 174, 273, 382 |
| Tru9I | TTAA | 3 cut(s) | 174, 273, 382 |
| TscAI | CASTG | 1 cut(s) | 239 |
| TspDTI | ATGAA | 2 cut(s) | 128, 219 |
| TspGWI | ACGGA | 1 cut(s) | 68 |
| TspRI | CASTG | 1 cut(s) | 239 |
| XapI | RAATTY | 3 cut(s) | 50, 67, 241 |