Polyadenylate-binding protein-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0352911 RchiOBHm_Chr1g0352921 RchiOBHm_Chr6g0246511 |
| rosa_laevigata | RLG00000000775 RLG00000015251 |
| rosa_roxburghii | Rroxscaffold_3G00221210 Rroxscaffold_7G00214550 |
| rosa_rugosa | Rorug01G0243900.1 Rorug01G0244100 |
| rosa_samantha | Rh4CG230600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 95 |
| Acc36I | ACCTGC | 1 cut(s) | 95 |
| AciI | CCGC | 1 cut(s) | 60 |
| AcsI | RAATTY | 1 cut(s) | 55 |
| AgsI | TTSAA | 1 cut(s) | 269 |
| AluBI | AGCT | 3 cut(s) | 118, 249, 259 |
| AluI | AGCT | 3 cut(s) | 118, 249, 259 |
| Alw26I | GTCTC | 4 cut(s) | 21, 192, 214, 303 |
| ApeKI | GCWGC | 3 cut(s) | 98, 101, 301 |
| ApoI | RAATTY | 1 cut(s) | 55 |
| AsuHPI | GGTGA | 2 cut(s) | 229, 308 |
| BbvI | GCAGC | 3 cut(s) | 85, 88, 288 |
| BceAI | ACGGC | 1 cut(s) | 154 |
| BcoDI | GTCTC | 4 cut(s) | 21, 192, 214, 303 |
| BfaI | CTAG | 2 cut(s) | 42, 119 |
| BfmI | CTRYAG | 1 cut(s) | 234 |
| BfuAI | ACCTGC | 1 cut(s) | 95 |
| BisI | GCNGC | 3 cut(s) | 99, 102, 302 |
| BlsI | GCNGC | 3 cut(s) | 100, 103, 303 |
| BmsI | GCATC | 1 cut(s) | 113 |
| BpuEI | CTTGAG | 1 cut(s) | 229 |
| BseMII | CTCAG | 3 cut(s) | 128, 218, 287 |
| BseRI | GAGGAG | 1 cut(s) | 210 |
| BseXI | GCAGC | 3 cut(s) | 85, 88, 288 |
| BseYI | CCCAGC | 1 cut(s) | 304 |
| BsgI | GTGCAG | 1 cut(s) | 73 |
| BsmAI | GTCTC | 4 cut(s) | 21, 192, 214, 303 |
| BsmBI | CGTCTC | 1 cut(s) | 21 |
| BspACI | CCGC | 1 cut(s) | 60 |
| BspCNI | CTCAG | 3 cut(s) | 127, 219, 288 |
| BspMI | ACCTGC | 1 cut(s) | 95 |
| Bst6I | CTCTTC | 1 cut(s) | 30 |
| BstDEI | CTNAG | 3 cut(s) | 114, 227, 296 |
| BstMAI | GTCTC | 4 cut(s) | 21, 192, 214, 303 |
| BstSFI | CTRYAG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 3 cut(s) | 85, 88, 288 |
| BveI | ACCTGC | 1 cut(s) | 95 |
| CviJI | RGCY | 6 cut(s) | 41, 67, 118, 249, 259, 301 |
| CviKI_1 | RGCY | 6 cut(s) | 41, 67, 118, 249, 259, 301 |
| DdeI | CTNAG | 3 cut(s) | 114, 227, 296 |
| DraI | TTTAAA | 1 cut(s) | 189 |
| Eam1104I | CTCTTC | 1 cut(s) | 30 |
| EarI | CTCTTC | 1 cut(s) | 30 |
| EciI | GGCGGA | 1 cut(s) | 49 |
| Esp3I | CGTCTC | 1 cut(s) | 21 |
| FaiI | YATR | 4 cut(s) | 21, 74, 236, 252 |
| Fnu4HI | GCNGC | 3 cut(s) | 99, 102, 302 |
| Fsp4HI | GCNGC | 3 cut(s) | 99, 102, 302 |
| FspBI | CTAG | 2 cut(s) | 42, 119 |
| GluI | GCNGC | 3 cut(s) | 99, 102, 302 |
| GsaI | CCCAGC | 1 cut(s) | 308 |
| HincII | GTYRAC | 1 cut(s) | 126 |
| HindII | GTYRAC | 1 cut(s) | 126 |
| HinfI | GANTC | 1 cut(s) | 269 |
| HpaI | GTTAAC | 1 cut(s) | 126 |
| HphI | GGTGA | 2 cut(s) | 229, 308 |
| Hpy166II | GTNNAC | 1 cut(s) | 126 |
| Hpy188I | TCNGA | 1 cut(s) | 297 |
| Hpy8I | GTNNAC | 1 cut(s) | 126 |
| HpyCH4V | TGCA | 2 cut(s) | 90, 104 |
| HpyF3I | CTNAG | 3 cut(s) | 114, 227, 296 |
| KspAI | GTTAAC | 1 cut(s) | 126 |
| LpnPI | CCDG | 3 cut(s) | 93, 100, 290 |
| Lsp1109I | GCAGC | 3 cut(s) | 85, 88, 288 |
| LweI | GCATC | 1 cut(s) | 113 |
| MaeI | CTAG | 2 cut(s) | 42, 119 |
| MaeIII | GTNAC | 1 cut(s) | 76 |
| MboII | GAAGA | 3 cut(s) | 44, 47, 217 |
| MluCI | AATT | 1 cut(s) | 55 |
| MnlI | CCTC | 8 cut(s) | 31, 103, 188, 208, 222, 277, 291, 329 |
| MseI | TTAA | 3 cut(s) | 125, 188, 255 |
| PaqCI | CACCTGC | 1 cut(s) | 95 |
| PfeI | GAWTC | 1 cut(s) | 269 |
| PkrI | GCNGC | 3 cut(s) | 100, 103, 303 |
| PspFI | CCCAGC | 1 cut(s) | 304 |
| SaqAI | TTAA | 3 cut(s) | 125, 188, 255 |
| SatI | GCNGC | 3 cut(s) | 99, 102, 302 |
| SfaNI | GCATC | 1 cut(s) | 113 |
| SfcI | CTRYAG | 1 cut(s) | 234 |
| SgeI | CNNG | 8 cut(s) | 54, 76, 99, 120, 131, 214, 258, 317 |
| SmlI | CTYRAG | 1 cut(s) | 244 |
| SmoI | CTYRAG | 1 cut(s) | 244 |
| Sse9I | AATT | 1 cut(s) | 55 |
| SsiI | CCGC | 1 cut(s) | 60 |
| SspI | AATATT | 1 cut(s) | 156 |
| SspMI | CTAG | 2 cut(s) | 42, 119 |
| TaqI | TCGA | 2 cut(s) | 166, 328 |
| TasI | AATT | 1 cut(s) | 55 |
| TfiI | GAWTC | 1 cut(s) | 269 |
| Tru1I | TTAA | 3 cut(s) | 125, 188, 255 |
| Tru9I | TTAA | 3 cut(s) | 125, 188, 255 |
| TseI | GCWGC | 3 cut(s) | 98, 101, 301 |
| XapI | RAATTY | 1 cut(s) | 55 |
| XspI | CTAG | 2 cut(s) | 42, 119 |