RLG00000019601

ADP,ATP carrier protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
54121148 .. 54124568
3421 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019601

Sequence Viewer

Length: 1842 bp
ATGGAGGCTGTTCTACAAACCAGAGGGCTCCTCTCTCTGCCCCCAAATCCCAAGGCCAGGTATTCACAGCCTTCTCTGGGCTTAAAGCAGCGAGCTTTCTCCACAAAACCCAAAACCCCAACTGGGTTATCTCTTTCCTCCTCAAATGGGTTCCAGAAATTTCAAACCTTTGCCCCCAAAACTCATGGCTTTGGCGCAAAAGAAAAGAACTTGTTCGTCTGCAGAGCTGAGGCGGCTGCTGCTGCTGCGGCTGATGGGTTTGGTGAAATTGAGGAGCGCAAGTTCTTGGGGGTTGGGACTTCAACCCTCAAGAAGATTGTACCACTTGGGTTGATGTTCTTTTGTATTCTTTTCAATTACACAATCCTGAGGGATACGAAAGATGTGTTGGTTGTAACAGCTAAAGGGAGTAGTGCAGAGATTATACCATTCTTAAAGACTTGGGTGAATTTGCCCATGGCTGTTGGCTTCATGCTCTTATACACAAAGTTGTCTAATGTTTTGTCAAAGAAGGCTCTCTTCTACACTGTTATTCTTCCATTCATCGCCTTTTTCGGGGCTTTCGGGTTCATCTTGTATCCCATGAGCAGCTACATCCACCCTGAAGCGCTTGCTGATAGTCTTCTCAACGCACTTGGCCCTAGATTCCTTGGTCCACTTGCAATCCTGAGGATTTGGAGCTTCTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTCGTTTCTGTGCTTTTCTGGGGTTTTGCCAATCAGATAACTACCGTTGACGAAGCAAAAAGGTTTTACCCTCTATTTGGACTTGGGGCCAATATTGCCCTCATTTTCTCAGGCAGAACAGTAAAGTATTTCTCTAATTTGAGGAAAAATTTGGGTCCTGGAGTTGATGGTTGGGCCCTTTCCTTAAAGGGGATGATGAGCATTGTGGTGATGATGGGCTTAGCAATCTGCGGTCTATACTGGTGGACAAATGCTTATGCTCCTCTTCCTACCCGCAGCAAGAAGAAGAAGGAAAAGCCCAAAATGGGGACAATGGAGAGTTTGAAGTTTTTGGTGTCTTCACCATACATCAGAGATCTTGCCACTTTGGTGGTTGCATATGGTATTAGCATCAACCTTGTTGAGGTTACATGGAAGTCCAAGCTCAAAGCTCAGTTTCCAAGCCCAAATGAGTACTCTTCTTTTATGGGTGACTTCTCAACTGCCACTGGAATAGCGACTTTCACAATGATGTTGCTCAGCCAATTTATATTCGAAAAATATGGATGGGGAGTTGCTGCGAAGATCACACCTACTGTACTACTTCTGACCGGAGTTGGTTTCTTCTCTCTGATATTGTTTGGTGGCCCACTTTCACCAGCTATTGCAAGCTTTGGGATGACTCCTCTTCTGGCAGCTGTATATGTGGGTGCTTTGCAAAACATTTTCAGCAAGAGTGCCAAGTACAGTTTGTTTGACCCGTGCAAAGAAATGGCATACATTCCCTTGGATGAAGACACTAAGGTTAAAGGAAAGGCAGCCATTGATGTTGTCTGCAACCCATTGGGGAAGTCTGGTGGTGCACTTATTCAGCAGTTTATGATTTTAACATTCGGGTCACTTGCAAACTCAACTCCTTACCTTGGAGGAGTACTTCTGGTGATTGTTCTTGCATGGCTCGGAGCAGCGAGGTCTCTTGACACCCAGTTCACTGCATTGCGACAGGAGGAAGAACTTGAAAAGGAGATGGAAAGAGCGAATGTTAAGATCCCAGTTGTGTCTGAAGGAAGTGAAAACGGTTCTCTTGCGACCGAGCCATTGCTGAACCCAGCACTCGGAGACTCAGCCAGCAGTGCTTAA

Protein Analysis

614

Amino Acids

66.68

Weight (kDa)

9.42

Isoelectric Point (pI)

30.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TLC PF03219 94 - 564 3.2e-202 TLC ATP/ADP transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0010865)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 233, 248, 954, 997
AclWI GGATC 1 cut(s) 1744
AcsI RAATTY 3 cut(s) 158, 448, 871
AcuI CTGAAG 2 cut(s) 624, 1785
AfaI GTAC 5 cut(s) 321, 1178, 1302, 1448, 1635
AfeI AGCGCT 1 cut(s) 609
AgsI TTSAA 5 cut(s) 164, 303, 355, 1048, 1721
AjnI CCWGG 2 cut(s) 56, 880
AjuI GAANNNNNNNTTGG 2 cut(s) 371, 403
AleI CACNNNNGTG 1 cut(s) 1091
AloI GAACNNNNNNTCC 2 cut(s) 266, 298
Alw21I GWGCWC 1 cut(s) 1567
Alw26I GTCTC 2 cut(s) 1680, 1815
Alw44I GTGCAC 1 cut(s) 1563
AlwI GGATC 1 cut(s) 1744
Aor51HI AGCGCT 1 cut(s) 609
AoxI GGCC 5 cut(s) 54, 637, 810, 897, 1348
ApaI GGGCCC 1 cut(s) 901
ApaLI GTGCAC 1 cut(s) 1563
ApoI RAATTY 3 cut(s) 158, 448, 871
Asp700I GAANNNNTTC 1 cut(s) 212
AspLEI GCGC 3 cut(s) 197, 279, 610
AspS9I GGNCC 7 cut(s) 638, 653, 810, 878, 897, 898, 1349
AsuHPI GGTGA 7 cut(s) 275, 457, 943, 1056, 1205, 1350, 1654
AsuII TTCGAA 1 cut(s) 1257
AvaII GGWCC 2 cut(s) 653, 878
AxyI CCTNAGG 2 cut(s) 368, 668
BaeGI GKGCMC 2 cut(s) 901, 1567
BanII GRGCYC 2 cut(s) 30, 901
BbsI GAAGAC 3 cut(s) 614, 1053, 1503
Bbv12I GWGCWC 1 cut(s) 1567
BbvCI CCTCAGC 1 cut(s) 228
BccI CCATC 5 cut(s) 248, 884, 931, 1263, 1723
BciT130I CCWGG 2 cut(s) 58, 882
BciVI GTATCC 2 cut(s) 367, 588
BcoDI GTCTC 2 cut(s) 1680, 1815
BfaI CTAG 1 cut(s) 642
BfmI CTRYAG 1 cut(s) 220
BfoI RGCGCY 1 cut(s) 611
BfuI GTATCC 2 cut(s) 367, 588
BglII AGATCT 1 cut(s) 1078
BlpI GCTNAGC 2 cut(s) 943, 1241
BmcAI AGTACT 2 cut(s) 1178, 1635
Bme1390I CCNGG 2 cut(s) 58, 882
Bme18I GGWCC 2 cut(s) 653, 878
BmgT120I GGNCC 7 cut(s) 638, 653, 810, 878, 897, 898, 1349
BmiI GGNNCC 5 cut(s) 29, 152, 811, 879, 899
BmrFI CCNGG 2 cut(s) 58, 882
BmrI ACTGGG 3 cut(s) 132, 1681, 1748
BmsI GCATC 1 cut(s) 1122
BmuI ACTGGG 3 cut(s) 132, 1681, 1748
BpiI GAAGAC 3 cut(s) 614, 1053, 1503
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BpmI CTGGAG 1 cut(s) 903
Bpu10I CCTNAGC 1 cut(s) 228
Bpu1102I GCTNAGC 2 cut(s) 943, 1241
Bpu14I TTCGAA 1 cut(s) 1257
BpuEI CTTGAG 1 cut(s) 293
BsaI GGTCTC 1 cut(s) 1680
BsaJI CCNNGG 5 cut(s) 51, 456, 649, 1488, 1624
BsaWI WCCGGW 1 cut(s) 1313
BsaXI ACNNNNNCTCC 4 cut(s) 266, 296, 670, 700
Bse1I ACTGG 5 cut(s) 127, 968, 1216, 1687, 1754
Bse21I CCTNAGG 2 cut(s) 368, 668
Bse3DI GCAATG 2 cut(s) 1697, 1799
BseBI CCWGG 2 cut(s) 58, 882
BseDI CCNNGG 5 cut(s) 51, 456, 649, 1488, 1624
BseGI GGATG 5 cut(s) 594, 921, 1274, 1386, 1498
BseMI GCAATG 2 cut(s) 1697, 1799
BseMII CTCAG 7 cut(s) 219, 359, 659, 846, 1169, 1255, 1839
BseNI ACTGG 5 cut(s) 127, 968, 1216, 1687, 1754
BseRI GAGGAG 6 cut(s) 20, 130, 287, 975, 1377, 1644
BseSI GKGCMC 2 cut(s) 901, 1567
BseYI CCCAGC 1 cut(s) 1810
BsgI GTGCAG 1 cut(s) 435
Bsh1285I CGRYCG 1 cut(s) 1794
BshFI GGCC 5 cut(s) 56, 639, 812, 899, 1350
BsiEI CGRYCG 1 cut(s) 1794
BsiHKAI GWGCWC 1 cut(s) 1567
BsiSI CCGG 1 cut(s) 1314
BslFI GGGAC 2 cut(s) 310, 1045
BsmAI GTCTC 2 cut(s) 1680, 1815
BsmFI GGGAC 2 cut(s) 310, 1045
BsnI GGCC 5 cut(s) 56, 639, 812, 899, 1350
Bso31I GGTCTC 1 cut(s) 1680
Bsp119I TTCGAA 1 cut(s) 1257
Bsp120I GGGCCC 1 cut(s) 897
Bsp1286I GDGCHC 3 cut(s) 30, 901, 1567
Bsp143I GATC 3 cut(s) 1078, 1287, 1749
Bsp1720I GCTNAGC 2 cut(s) 943, 1241
Bsp19I CCATGG 1 cut(s) 456
BspACI CCGC 4 cut(s) 233, 248, 954, 997
BspANI GGCC 5 cut(s) 56, 639, 812, 899, 1350
BspCNI CTCAG 7 cut(s) 220, 360, 660, 845, 1168, 1254, 1838
BspLI GGNNCC 5 cut(s) 29, 152, 811, 879, 899
BspMAI CTGCAG 1 cut(s) 224
BspPI GGATC 1 cut(s) 1744
BspT104I TTCGAA 1 cut(s) 1257
BspTNI GGTCTC 1 cut(s) 1680
BsrDI GCAATG 2 cut(s) 1697, 1799
BsrI ACTGG 5 cut(s) 127, 968, 1216, 1687, 1754
BssECI CCNNGG 5 cut(s) 51, 456, 649, 1488, 1624
BssMI GATC 3 cut(s) 1078, 1287, 1749
BssT1I CCWWGG 5 cut(s) 51, 456, 649, 1488, 1624
Bst2UI CCWGG 2 cut(s) 58, 882
Bst4CI ACNGT 6 cut(s) 529, 769, 844, 1300, 1451, 1781
Bst6I CTCTTC 4 cut(s) 524, 993, 1186, 1395
BstBI TTCGAA 1 cut(s) 1257
BstC8I GCNNGC 4 cut(s) 93, 612, 1372, 1831
BstDEI CTNAG 9 cut(s) 228, 368, 668, 832, 943, 1155, 1241, 1503, 1825
BstDSI CCRYGG 1 cut(s) 456
BstENI CCTNNNNNAGG 1 cut(s) 1124
BstF5I GGATG 5 cut(s) 594, 921, 1274, 1386, 1498
BstH2I RGCGCY 1 cut(s) 611
BstHHI GCGC 3 cut(s) 197, 279, 610
BstKTI GATC 3 cut(s) 1081, 1290, 1752
BstMAI GTCTC 2 cut(s) 1680, 1815
BstMBI GATC 3 cut(s) 1078, 1287, 1749
BstMCI CGRYCG 1 cut(s) 1794
BstMWI GCNNNNNNNGC 7 cut(s) 233, 239, 242, 245, 248, 818, 1835
BstNI CCWGG 2 cut(s) 58, 882
BstSCI CCNGG 2 cut(s) 56, 880
BstSFI CTRYAG 1 cut(s) 220
BstSLI GKGCMC 2 cut(s) 901, 1567
BstV2I GAAGAC 3 cut(s) 614, 1053, 1503
BstX2I RGATCY 2 cut(s) 1078, 1749
BstXI CCANNNNNNTGG 1 cut(s) 1093
BstYI RGATCY 2 cut(s) 1078, 1749
Bsu36I CCTNAGG 2 cut(s) 368, 668
BsuI GTATCC 2 cut(s) 367, 588
BsuRI GGCC 5 cut(s) 56, 639, 812, 899, 1350
BtgI CCRYGG 1 cut(s) 456
BtgZI GCGATG 1 cut(s) 529
BtsCI GGATG 5 cut(s) 594, 921, 1274, 1386, 1498
BtsI GCAGTG 2 cut(s) 1692, 1840
BtsIMutI CAGTG 4 cut(s) 525, 1209, 1692, 1840
Cac8I GCNNGC 4 cut(s) 93, 612, 1372, 1831
CfoI GCGC 3 cut(s) 197, 279, 610
Cfr13I GGNCC 7 cut(s) 638, 653, 810, 878, 897, 898, 1349
Csp6I GTAC 5 cut(s) 320, 1177, 1301, 1447, 1634
CspCI CAANNNNNGTGG 2 cut(s) 312, 347
CviAII CATG 7 cut(s) 185, 457, 472, 583, 700, 1134, 1656
CviQI GTAC 5 cut(s) 320, 1177, 1301, 1447, 1634
DdeI CTNAG 9 cut(s) 228, 368, 668, 832, 943, 1155, 1241, 1503, 1825
DpnI GATC 3 cut(s) 1080, 1289, 1751
DpnII GATC 3 cut(s) 1078, 1287, 1749
Eam1104I CTCTTC 4 cut(s) 524, 993, 1186, 1395
EarI CTCTTC 4 cut(s) 524, 993, 1186, 1395
Eco130I CCWWGG 5 cut(s) 51, 456, 649, 1488, 1624
Eco24I GRGCYC 2 cut(s) 30, 901
Eco31I GGTCTC 1 cut(s) 1680
Eco47I GGWCC 2 cut(s) 653, 878
Eco47III AGCGCT 1 cut(s) 609
Eco57I CTGAAG 2 cut(s) 624, 1785
Eco81I CCTNAGG 2 cut(s) 368, 668
EcoNI CCTNNNNNAGG 1 cut(s) 1124
EcoO109I RGGNCCY 2 cut(s) 878, 898
EcoRII CCWGG 2 cut(s) 56, 880
EcoT14I CCWWGG 5 cut(s) 51, 456, 649, 1488, 1624
EcoT38I GRGCYC 2 cut(s) 30, 901
ErhI CCWWGG 5 cut(s) 51, 456, 649, 1488, 1624
FaeI CATG 7 cut(s) 188, 460, 475, 586, 703, 1137, 1659
FalI AAGNNNNNCTT 2 cut(s) 503, 535
FaqI GGGAC 2 cut(s) 310, 1045
FatI CATG 7 cut(s) 184, 456, 471, 582, 699, 1133, 1655
FauI CCCGC 1 cut(s) 1004
FauNDI CATATG 1 cut(s) 1102
FokI GGATG 5 cut(s) 581, 928, 1281, 1393, 1505
FriOI GRGCYC 2 cut(s) 30, 901
FspBI CTAG 1 cut(s) 642
GlaI GCGC 3 cut(s) 196, 278, 609
GsaI CCCAGC 1 cut(s) 1814
GsuI CTGGAG 1 cut(s) 903
HaeII RGCGCY 1 cut(s) 611
HaeIII GGCC 5 cut(s) 56, 639, 812, 899, 1350
HapII CCGG 1 cut(s) 1314
HhaI GCGC 3 cut(s) 197, 279, 610
Hin1II CATG 7 cut(s) 188, 460, 475, 586, 703, 1137, 1659
Hin6I GCGC 3 cut(s) 195, 277, 608
HinP1I GCGC 3 cut(s) 195, 277, 608
HincII GTYRAC 1 cut(s) 772
HindII GTYRAC 1 cut(s) 772
HindIII AAGCTT 1 cut(s) 1372
HinfI GANTC 3 cut(s) 645, 1384, 1823
HpaII CCGG 1 cut(s) 1314
HphI GGTGA 7 cut(s) 275, 457, 943, 1056, 1205, 1350, 1654
Hpy166II GTNNAC 5 cut(s) 656, 772, 969, 1565, 1692
Hpy188I TCNGA 7 cut(s) 759, 1076, 1311, 1335, 1664, 1765, 1820
Hpy188III TCNNGA 5 cut(s) 154, 310, 367, 667, 1679
Hpy8I GTNNAC 5 cut(s) 656, 772, 969, 1565, 1692
HpyAV CCTTC 4 cut(s) 81, 505, 1006, 1760
HpyCH4III ACNGT 6 cut(s) 529, 769, 844, 1300, 1451, 1781
HpyF10VI GCNNNNNNNGC 7 cut(s) 233, 239, 242, 245, 248, 818, 1835
HpyF3I CTNAG 9 cut(s) 228, 368, 668, 832, 943, 1155, 1241, 1503, 1825
Hsp92II CATG 7 cut(s) 188, 460, 475, 586, 703, 1137, 1659
HspAI GCGC 3 cut(s) 195, 277, 608
Kzo9I GATC 3 cut(s) 1078, 1287, 1749
LmnI GCTCC 5 cut(s) 33, 274, 678, 988, 1664
LweI GCATC 1 cut(s) 1122
MaeI CTAG 1 cut(s) 642
MaeIII GTNAC 4 cut(s) 394, 1129, 1193, 1599
MalI GATC 3 cut(s) 1080, 1289, 1751
MboI GATC 3 cut(s) 1078, 1287, 1749
MflI RGATCY 2 cut(s) 1078, 1749
MhlI GDGCHC 3 cut(s) 30, 901, 1567
MluCI AATT 8 cut(s) 158, 267, 355, 448, 707, 859, 871, 1247
MlyI GAGTC 2 cut(s) 1378, 1817
MroXI GAANNNNTTC 1 cut(s) 212
MseI TTAA 7 cut(s) 83, 434, 908, 1509, 1589, 1746, 1840
MslI CAYNNNNRTG 3 cut(s) 929, 1091, 1232
MspA1I CMGCKG 1 cut(s) 1400
MspI CCGG 1 cut(s) 1314
MspR9I CCNGG 2 cut(s) 58, 882
MvaI CCWGG 2 cut(s) 58, 882
MwoI GCNNNNNNNGC 7 cut(s) 233, 239, 242, 245, 248, 818, 1835
NcoI CCATGG 1 cut(s) 456
NdeI CATATG 1 cut(s) 1102
NdeII GATC 3 cut(s) 1078, 1287, 1749
NlaIII CATG 7 cut(s) 188, 460, 475, 586, 703, 1137, 1659
NlaIV GGNNCC 5 cut(s) 29, 152, 811, 879, 899
NmuCI GTSAC 2 cut(s) 1193, 1599
NspV TTCGAA 1 cut(s) 1257
OliI CACNNNNGTG 1 cut(s) 1091
PdmI GAANNNNTTC 1 cut(s) 212
PfeI GAWTC 1 cut(s) 645
PfoI TCCNGGA 1 cut(s) 880
PleI GAGTC 2 cut(s) 1378, 1817
PpsI GAGTC 2 cut(s) 1378, 1817
PpuMI RGGWCCY 1 cut(s) 878
Psp5II RGGWCCY 1 cut(s) 878
Psp6I CCWGG 2 cut(s) 56, 880
PspFI CCCAGC 1 cut(s) 1810
PspGI CCWGG 2 cut(s) 56, 880
PspN4I GGNNCC 5 cut(s) 29, 152, 811, 879, 899
PspOMI GGGCCC 1 cut(s) 897
PspPI GGNCC 7 cut(s) 638, 653, 810, 878, 897, 898, 1349
PspPPI RGGWCCY 1 cut(s) 878
PstI CTGCAG 1 cut(s) 224
PsuI RGATCY 2 cut(s) 1078, 1749
PvuII CAGCTG 1 cut(s) 1400
RsaI GTAC 5 cut(s) 321, 1178, 1302, 1448, 1635
RsaNI GTAC 5 cut(s) 320, 1177, 1301, 1447, 1634
RseI CAYNNNNRTG 3 cut(s) 929, 1091, 1232
SaqAI TTAA 7 cut(s) 83, 434, 908, 1509, 1589, 1746, 1840
Sau3AI GATC 3 cut(s) 1078, 1287, 1749
Sau96I GGNCC 7 cut(s) 638, 653, 810, 878, 897, 898, 1349
ScaI AGTACT 2 cut(s) 1178, 1635
SchI GAGTC 2 cut(s) 1378, 1817
ScrFI CCNGG 2 cut(s) 58, 882
SduI GDGCHC 3 cut(s) 30, 901, 1567
SfaNI GCATC 1 cut(s) 1122
SfcI CTRYAG 1 cut(s) 220
SfuI TTCGAA 1 cut(s) 1257
SinI GGWCC 2 cut(s) 653, 878
SmiMI CAYNNNNRTG 3 cut(s) 929, 1091, 1232
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
Sse9I AATT 8 cut(s) 158, 267, 355, 448, 707, 859, 871, 1247
SsiI CCGC 4 cut(s) 233, 248, 954, 997
SspI AATATT 1 cut(s) 817
SspMI CTAG 1 cut(s) 642
StyD4I CCNGG 2 cut(s) 56, 880
StyI CCWWGG 5 cut(s) 51, 456, 649, 1488, 1624
TaaI ACNGT 6 cut(s) 529, 769, 844, 1300, 1451, 1781
TaqI TCGA 1 cut(s) 1257
TaqII GACCGA 1 cut(s) 1808
TasI AATT 8 cut(s) 158, 267, 355, 448, 707, 859, 871, 1247
TatI WGTACW 4 cut(s) 1176, 1300, 1446, 1633
TauI GCSGC 2 cut(s) 236, 251
TfiI GAWTC 1 cut(s) 645
Tru1I TTAA 7 cut(s) 83, 434, 908, 1509, 1589, 1746, 1840
Tru9I TTAA 7 cut(s) 83, 434, 908, 1509, 1589, 1746, 1840
TscAI CASTG 4 cut(s) 532, 1216, 1699, 1840
TseFI GTSAC 2 cut(s) 1193, 1599
Tsp45I GTSAC 2 cut(s) 1193, 1599
TspDTI ATGAA 4 cut(s) 460, 532, 559, 1509
TspRI CASTG 4 cut(s) 532, 1216, 1699, 1840
VneI GTGCAC 1 cut(s) 1563
VpaK11BI GGWCC 2 cut(s) 653, 878
XagI CCTNNNNNAGG 1 cut(s) 1124
XapI RAATTY 3 cut(s) 158, 448, 871
XmnI GAANNNNTTC 1 cut(s) 212
XspI CTAG 1 cut(s) 642
ZrmI AGTACT 2 cut(s) 1178, 1635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.