Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013566

Physical Location & Seq

Genomic Coordinates Reverse (-)

69218173 .. 69221724

Gene Structure 3552 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020834

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGGGGTTCCGGTGAATTTTCTGTCCCAGCTATGGAGTTTCATCTCCTTCCTACCCTTCTTCTTCTTGCTTCTCATCCTGGGCCTCGTCAAAGCTGCAATCATTGGGCCGGTGGCGCTATGCATTATTTTCATTGGAAATTCAGCTGTAATTGCTGGGCTTTGGATAGCACATTTTGTTTGGACGTACTACTGCGTAGCAAGAAGCAAGAGGCTTGGACTTTTGTTAAAGATTCTAGTGCTGGTATTACTTCCGGTCCCGCTTGTCCTTTGGCCGGTTATTGGAGTTGTCGGGAGTCTTTTAGGTGGGATTGGATATGGGTTTTTTTCTCCCCTTCTTGCGACATTTGAGGCTGTTGGCGAGAATGTCCCTGACAAGTTCTACCACTGCTTTGTAGATGGTTCCTGGTCAACAATCAAAGGAAGCTGCATAATCGTCCAGGATCTCACAGATTTTTGCTTCCACTCTTACTTCTCCTACATGGATGAACTAATGGAACAGATACCTGCCAATGAAAAGCCCATGGATATAGAGTTAATGAAACTGCCAGGTTGTTTGTTGGTGAGTGTGATTGGAGTCCCAGCGGACGTGTCTTTGATTACAGCTGTTGCACTATGGAAAAGTCCATACATGCTGTTTAAAGGATGGAAGAGGCTATTAGAAGACTTGATAGGCAGAGAGGGACCATTCTTGGAAACAGAATGTGTTCCGTTTGCTGGTCTTGCCATTCTTCTATGGCCTCTGGCAGTTGTTGGAGGTGTAGTAGCTTCTTTCTTCTTCAGCTTCTTTTTAGGACTATATAGTGGTGCTATTGTGTATCAGGAAGACTCAGTCCACCTGGGACTTGCCTTCATAGTTTCAGTGGTTTCACTGTATGATGAATATGTAAATGATTTACTGTACTTGAGGGAGGGATCCTGCTTTCCCAGGCCGATATACCGTAGAAATATGAGCGCTTTCTCGGAGAGGAAGAGCTCTGGTGACAATGATAATAATGATTCGAAGAATGGTAGAGAAGGCTTATACAGATCAAAACTTGTGTCACAACAATCAAGACTTTGGAAGCAGGCACACCACCGGTATAAAGCAATGCAGGTGTGGGGCTGGCTATTCAAATCTTGCGAGATTAATGGTAGAATTCTCCTCCGTGATGGTCTGATAGATGTCAAGGATGTAGAAGAATGCATCTTGAAGGGAAATTGTAAGAAGTTGGGAATCAAACTACCTGCTTGGTCGATATTACAATGTCTTCTTGCGTCAGCCAAGTCTAGTTCGTCCGGGTTGGTAATATCTGATGATGTAGAGTTGACAAAGTCAAATGGGCCAAGGGATAAAGTGTTCGACTGGTTCATTGGACCATTATTAGTCATGAAAGAGCAAATAAAGAATATGCAACTGGATGCGAATGAAGAAATGGCTCTGAGATATGTCTTTATGAAATGCAAAAATGAAACACCTGAGGAGTGGGATGGCACTGAATTTCCATCTGCAGATCCTGTCCGAAGGGCACAGTTGCAAGCCATATTTAGAAGACTACAGGGTCTCGTAGCTTCCATGTCTAGGGTTCCAACATTCAGACGCCGGTTTAGAAATTTGGTAAAGGTCCTGTATCTAGAAGCAGTTCAGGCTGCTGCTTCTGGTAATCACATAGGAGTAATATTAAATCCCAGAAAGGGCAACCCGAATTTGATGGGAAGTGAGGATGGGAAAGAATCAAAGGAAGGAGACGAGATTGTTGTGGATGTGGCAGAACTGAATACTTGTGACAATGGGACCAAGAGTTCAATGGTAAGTGAGAATGGGAAAGAATCAGAGGAAGGAGAAGTAATTGTTCTGGATGTAGCAGAACGGAATACTAATGACAATCGGAACAAGAGTTTGATGGGAAGTGAGAAGGAAGGAGGAGAACTTTTTATGGACGTAGCAGAAGAGAGTACGTATGATGGTGGGAACAGGAGTTCAATGGGGAGCGAGAAACGAAAAGAATCAAAGGAAGGAGAAGAAATTGTTGTGGATGTTGCAGAACAGAATACTTACAACAATGGGAACATAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

686

Amino Acids

76.33

Weight (kDa)

5.39

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12680
fragaria_vesca	FvH4_6g40250
malus_domestica	MD17G1121000.v1.1
prunus_persica	Prupe.3G192900_v2.0.a1 Prupe.3G192900_v2.0.a1 Prupe.3G192900_v2.0.a1 Prupe.3G192900_v2.0.a1 Prupe.3G192900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0155271
rosa_laevigata	RLG00000020834
rosa_roxburghii	Rroxscaffold_2G00093810
rosa_rugosa	Rorug02G0446500 Rorug02G0446600
rosa_samantha	Rh2AG513000 Rh2BG523600 Rh2CG498000 Rh2DG533300
rosa_wichuraiana	Rw2G042150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1084
AasI	GACNNNNNNGTC	1 cut(s)	1539
Acc36I	ACCTGC	3 cut(s)	514, 1084, 1234
AciI	CCGC	2 cut(s)	260, 584
AclWI	GGATC	4 cut(s)	450, 909, 922, 1487
AcoI	YGGCCR	1 cut(s)	272
AcsI	RAATTY	6 cut(s)	16, 139, 1137, 1478, 1591, 1684
AcuI	CTGAAG	1 cut(s)	763
AcyI	GRCGYC	1 cut(s)	1579
AfaI	GTAC	3 cut(s)	188, 902, 1936
AfeI	AGCGCT	1 cut(s)	955
AfiI	CCNNNNNNNGG	6 cut(s)	33, 274, 281, 716, 1560, 1673
AflIII	ACRYGT	1 cut(s)	588
AgeI	ACCGGT	1 cut(s)	1077
AgsI	TTSAA	4 cut(s)	1114, 1192, 1785, 1962
AjiI	CACGTC	1 cut(s)	589
AjnI	CCWGG	6 cut(s)	78, 404, 438, 547, 837, 926
AloI	GAACNNNNNNTCC	6 cut(s)	1322, 1354, 1765, 1797, 1942, 1974
AluBI	AGCT	9 cut(s)	31, 95, 146, 426, 605, 767, 783, 975, 1550
AluI	AGCT	9 cut(s)	31, 95, 146, 426, 605, 767, 783, 975, 1550
Alw21I	GWGCWC	1 cut(s)	977
Alw26I	GTCTC	2 cut(s)	1547, 1719
AlwI	GGATC	4 cut(s)	450, 909, 922, 1487
AlwNI	CAGNNNCTG	1 cut(s)	1496
Aor51HI	AGCGCT	1 cut(s)	955
AoxI	GGCC	6 cut(s)	82, 107, 272, 737, 929, 1322
ApeKI	GCWGC	4 cut(s)	95, 426, 1628, 1631
ApoI	RAATTY	6 cut(s)	16, 139, 1137, 1478, 1591, 1684
ArsI	GACNNNNNNTTYG	2 cut(s)	1025, 1057
AseI	ATTAAT	1 cut(s)	1128
AsiGI	ACCGGT	1 cut(s)	1077
Asp700I	GAANNNNTTC	2 cut(s)	705, 1620
AspLEI	GCGC	2 cut(s)	118, 956
AspS9I	GGNCC	8 cut(s)	82, 107, 256, 683, 1322, 1355, 1603, 1773
AsuC2I	CCSGG	1 cut(s)	1279
AsuHPI	GGTGA	3 cut(s)	25, 574, 992
AsuII	TTCGAA	1 cut(s)	1001
AvaII	GGWCC	5 cut(s)	256, 683, 1355, 1603, 1773
AxyI	CCTNAGG	1 cut(s)	1458
BaeGI	GKGCMC	1 cut(s)	1510
BamHI	GGATCC	1 cut(s)	914
BanII	GRGCYC	1 cut(s)	977
BbsI	GAAGAC	4 cut(s)	669, 831, 1241, 1537
Bbv12I	GWGCWC	1 cut(s)	977
BbvI	GCAGC	4 cut(s)	82, 413, 1615, 1618
BccI	CCATC	9 cut(s)	392, 639, 1145, 1463, 1492, 1684, 1697, 1876, 1937
BciT130I	CCWGG	6 cut(s)	80, 406, 440, 549, 839, 928
BcnI	CCSGG	1 cut(s)	1279
BcoDI	GTCTC	2 cut(s)	1547, 1719
BfaI	CTAG	4 cut(s)	236, 1269, 1560, 1613
BfmI	CTRYAG	2 cut(s)	1488, 1535
BfoI	RGCGCY	2 cut(s)	119, 957
BfuAI	ACCTGC	3 cut(s)	514, 1084, 1234
BisI	GCNGC	4 cut(s)	96, 427, 1629, 1632
BlsI	GCNGC	4 cut(s)	97, 428, 1630, 1633
Bme1390I	CCNGG	7 cut(s)	80, 406, 440, 549, 839, 928, 1279
Bme18I	GGWCC	5 cut(s)	256, 683, 1355, 1603, 1773
BmgBI	CACGTC	1 cut(s)	589
BmgT120I	GGNCC	8 cut(s)	82, 107, 256, 683, 1322, 1355, 1603, 1773
BmiI	GGNNCC	7 cut(s)	9, 258, 403, 684, 916, 1566, 1774
BmrFI	CCNGG	7 cut(s)	80, 406, 440, 549, 839, 928, 1279
BmsI	GCATC	2 cut(s)	1194, 1390
BpiI	GAAGAC	4 cut(s)	669, 831, 1241, 1537
Bpu14I	TTCGAA	1 cut(s)	1001
BpuEI	CTTGAG	1 cut(s)	925
BpuMI	CCSGG	1 cut(s)	1279
BsaAI	YACGTR	1 cut(s)	1938
BsaHI	GRCGYC	1 cut(s)	1579
BsaI	GGTCTC	1 cut(s)	1547
BsaJI	CCNNGG	5 cut(s)	79, 522, 838, 926, 1325
BsaWI	WCCGGW	3 cut(s)	10, 253, 1077
BsaXI	ACNNNNNCTCC	2 cut(s)	747, 777
Bsc4I	CCNNNNNNNGG	6 cut(s)	33, 274, 281, 716, 1560, 1673
Bse118I	RCCGGY	4 cut(s)	109, 274, 1077, 1581
Bse1I	ACTGG	2 cut(s)	1349, 1401
Bse21I	CCTNAGG	1 cut(s)	1458
Bse3DI	GCAATG	1 cut(s)	1095
BseBI	CCWGG	6 cut(s)	80, 406, 440, 549, 839, 928
BseDI	CCNNGG	5 cut(s)	79, 522, 838, 926, 1325
BseLI	CCNNNNNNNGG	6 cut(s)	33, 274, 281, 716, 1560, 1673
BseMI	GCAATG	1 cut(s)	1095
BseMII	CTCAG	3 cut(s)	843, 1412, 1449
BseNI	ACTGG	2 cut(s)	1349, 1401
BseRI	GAGGAG	3 cut(s)	1133, 1475, 1917
BseSI	GKGCMC	1 cut(s)	1510
BseXI	GCAGC	4 cut(s)	82, 413, 1615, 1618
BseYI	CCCAGC	3 cut(s)	27, 155, 580
BshFI	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
BshTI	ACCGGT	1 cut(s)	1077
BsiHKAI	GWGCWC	1 cut(s)	977
BsiSI	CCGG	7 cut(s)	11, 110, 254, 275, 1078, 1278, 1582
BslFI	GGGAC	7 cut(s)	10, 242, 353, 563, 696, 855, 1786
BslI	CCNNNNNNNGG	6 cut(s)	33, 274, 281, 716, 1560, 1673
BsmAI	GTCTC	2 cut(s)	1547, 1719
BsmBI	CGTCTC	1 cut(s)	1719
BsmFI	GGGAC	7 cut(s)	10, 242, 353, 563, 696, 855, 1786
BsmI	GAATGC	1 cut(s)	1187
BsnI	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
Bso31I	GGTCTC	1 cut(s)	1547
Bsp119I	TTCGAA	1 cut(s)	1001
Bsp1286I	GDGCHC	2 cut(s)	977, 1510
Bsp143I	GATC	4 cut(s)	442, 914, 1028, 1492
Bsp19I	CCATGG	1 cut(s)	522
BspACI	CCGC	2 cut(s)	260, 584
BspANI	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
BspCNI	CTCAG	3 cut(s)	842, 1413, 1450
BspHI	TCATGA	1 cut(s)	1368
BspLI	GGNNCC	7 cut(s)	9, 258, 403, 684, 916, 1566, 1774
BspMAI	CTGCAG	1 cut(s)	1492
BspMI	ACCTGC	3 cut(s)	514, 1084, 1234
BspPI	GGATC	4 cut(s)	450, 909, 922, 1487
BspQI	GCTCTTC	1 cut(s)	965
BspT104I	TTCGAA	1 cut(s)	1001
BspTNI	GGTCTC	1 cut(s)	1547
BsrDI	GCAATG	1 cut(s)	1095
BsrFI	RCCGGY	4 cut(s)	109, 274, 1077, 1581
BsrI	ACTGG	2 cut(s)	1349, 1401
BssAI	RCCGGY	4 cut(s)	109, 274, 1077, 1581
BssECI	CCNNGG	5 cut(s)	79, 522, 838, 926, 1325
BssMI	GATC	4 cut(s)	442, 914, 1028, 1492
BssNI	GRCGYC	1 cut(s)	1579
BssT1I	CCWWGG	2 cut(s)	522, 1325
Bst2UI	CCWGG	6 cut(s)	80, 406, 440, 549, 839, 928
Bst4CI	ACNGT	4 cut(s)	873, 900, 941, 1512
Bst6I	CTCTTC	3 cut(s)	644, 965, 1923
BstACI	GRCGYC	1 cut(s)	1579
BstBAI	YACGTR	1 cut(s)	1938
BstBI	TTCGAA	1 cut(s)	1001
BstC8I	GCNNGC	3 cut(s)	1068, 1106, 1518
BstDEI	CTNAG	3 cut(s)	829, 1421, 1458
BstDSI	CCRYGG	1 cut(s)	522
BstH2I	RGCGCY	2 cut(s)	119, 957
BstHHI	GCGC	2 cut(s)	118, 956
BstKTI	GATC	4 cut(s)	445, 917, 1031, 1495
BstMAI	GTCTC	2 cut(s)	1547, 1719
BstMBI	GATC	4 cut(s)	442, 914, 1028, 1492
BstMWI	GCNNNNNNNGC	4 cut(s)	115, 152, 722, 1625
BstNI	CCWGG	6 cut(s)	80, 406, 440, 549, 839, 928
BstNSI	RCATGY	1 cut(s)	634
BstSCI	CCNGG	7 cut(s)	78, 404, 438, 547, 837, 926, 1277
BstSFI	CTRYAG	2 cut(s)	1488, 1535
BstSLI	GKGCMC	1 cut(s)	1510
BstSNI	TACGTA	1 cut(s)	1938
BstV1I	GCAGC	4 cut(s)	82, 413, 1615, 1618
BstV2I	GAAGAC	4 cut(s)	669, 831, 1241, 1537
BstX2I	RGATCY	3 cut(s)	442, 914, 1492
BstYI	RGATCY	3 cut(s)	442, 914, 1492
Bsu36I	CCTNAGG	1 cut(s)	1458
BsuRI	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
BtgI	CCRYGG	1 cut(s)	522
BtrI	CACGTC	1 cut(s)	589
BtsI	GCAGTG	1 cut(s)	385
BtsIMutI	CAGTG	4 cut(s)	385, 867, 869, 1473
BveI	ACCTGC	3 cut(s)	514, 1084, 1234
Cac8I	GCNNGC	3 cut(s)	1068, 1106, 1518
CaiI	CAGNNNCTG	1 cut(s)	1496
CciI	TCATGA	1 cut(s)	1368
CfoI	GCGC	2 cut(s)	118, 956
Cfr10I	RCCGGY	4 cut(s)	109, 274, 1077, 1581
Cfr13I	GGNCC	8 cut(s)	82, 107, 256, 683, 1322, 1355, 1603, 1773
CseI	GACGC	2 cut(s)	1245, 1587
Csp6I	GTAC	3 cut(s)	187, 901, 1935
CspAI	ACCGGT	1 cut(s)	1077
CviAII	CATG	5 cut(s)	481, 523, 631, 1369, 1555
CviQI	GTAC	3 cut(s)	187, 901, 1935
DdeI	CTNAG	3 cut(s)	829, 1421, 1458
DpnI	GATC	4 cut(s)	444, 916, 1030, 1494
DpnII	GATC	4 cut(s)	442, 914, 1028, 1492
DraI	TTTAAA	1 cut(s)	640
DrdI	GACNNNNNNGTC	1 cut(s)	1539
DseDI	GACNNNNNNGTC	1 cut(s)	1539
EaeI	YGGCCR	1 cut(s)	272
Eam1104I	CTCTTC	3 cut(s)	644, 965, 1923
EarI	CTCTTC	3 cut(s)	644, 965, 1923
Ecl136II	GAGCTC	1 cut(s)	975
Eco105I	TACGTA	1 cut(s)	1938
Eco130I	CCWWGG	2 cut(s)	522, 1325
Eco24I	GRGCYC	1 cut(s)	977
Eco31I	GGTCTC	1 cut(s)	1547
Eco47I	GGWCC	5 cut(s)	256, 683, 1355, 1603, 1773
Eco47III	AGCGCT	1 cut(s)	955
Eco53kI	GAGCTC	1 cut(s)	975
Eco57I	CTGAAG	1 cut(s)	763
Eco81I	CCTNAGG	1 cut(s)	1458
EcoICRI	GAGCTC	1 cut(s)	975
EcoO109I	RGGNCCY	1 cut(s)	1603
EcoRI	GAATTC	1 cut(s)	1137
EcoRII	CCWGG	6 cut(s)	78, 404, 438, 547, 837, 926
EcoT14I	CCWWGG	2 cut(s)	522, 1325
EcoT22I	ATGCAT	2 cut(s)	125, 1187
EcoT38I	GRGCYC	1 cut(s)	977
ErhI	CCWWGG	2 cut(s)	522, 1325
Esp3I	CGTCTC	1 cut(s)	1719
FaeI	CATG	5 cut(s)	484, 526, 634, 1372, 1558
FaqI	GGGAC	7 cut(s)	10, 242, 353, 563, 696, 855, 1786
FatI	CATG	5 cut(s)	480, 522, 630, 1368, 1554
FauI	CCCGC	1 cut(s)	267
Fnu4HI	GCNGC	4 cut(s)	96, 427, 1629, 1632
FriOI	GRGCYC	1 cut(s)	977
Fsp4HI	GCNGC	4 cut(s)	96, 427, 1629, 1632
FspBI	CTAG	4 cut(s)	236, 1269, 1560, 1613
GlaI	GCGC	2 cut(s)	117, 955
GluI	GCNGC	4 cut(s)	96, 427, 1629, 1632
GsaI	CCCAGC	3 cut(s)	31, 159, 584
HaeII	RGCGCY	2 cut(s)	119, 957
HaeIII	GGCC	6 cut(s)	84, 109, 274, 739, 931, 1324
HapII	CCGG	7 cut(s)	11, 110, 254, 275, 1078, 1278, 1582
HgaI	GACGC	2 cut(s)	1245, 1587
HhaI	GCGC	2 cut(s)	118, 956
Hin1I	GRCGYC	1 cut(s)	1579
Hin1II	CATG	5 cut(s)	484, 526, 634, 1372, 1558
Hin6I	GCGC	2 cut(s)	116, 954
HinP1I	GCGC	2 cut(s)	116, 954
HincII	GTYRAC	2 cut(s)	411, 1308
HindII	GTYRAC	2 cut(s)	411, 1308
HinfI	GANTC	9 cut(s)	232, 295, 576, 827, 998, 1215, 1712, 1808, 1985
HpaII	CCGG	7 cut(s)	11, 110, 254, 275, 1078, 1278, 1582
HphI	GGTGA	3 cut(s)	25, 574, 992
Hpy166II	GTNNAC	3 cut(s)	411, 835, 1308
Hpy188I	TCNGA	8 cut(s)	964, 1158, 1294, 1422, 1502, 1577, 1813, 1869
Hpy188III	TCNNGA	7 cut(s)	292, 821, 1053, 1189, 1369, 1613, 1835
Hpy8I	GTNNAC	3 cut(s)	411, 835, 1308
HpyCH4III	ACNGT	4 cut(s)	873, 900, 941, 1512
HpyCH4IV	ACGT	4 cut(s)	185, 588, 1920, 1937
HpyF10VI	GCNNNNNNNGC	4 cut(s)	115, 152, 722, 1625
HpyF3I	CTNAG	3 cut(s)	829, 1421, 1458
HpySE526I	ACGT	4 cut(s)	185, 588, 1920, 1937
Hsp92I	GRCGYC	1 cut(s)	1579
Hsp92II	CATG	5 cut(s)	484, 526, 634, 1372, 1558
HspAI	GCGC	2 cut(s)	116, 954
Kzo9I	GATC	4 cut(s)	442, 914, 1028, 1492
LguI	GCTCTTC	1 cut(s)	965
LmnI	GCTCC	1 cut(s)	1968
Lsp1109I	GCAGC	4 cut(s)	82, 413, 1615, 1618
LweI	GCATC	2 cut(s)	1194, 1390
MaeI	CTAG	4 cut(s)	236, 1269, 1560, 1613
MaeII	ACGT	4 cut(s)	185, 588, 1920, 1937
MaeIII	GTNAC	3 cut(s)	980, 1041, 1763
MalI	GATC	4 cut(s)	444, 916, 1030, 1494
MboI	GATC	4 cut(s)	442, 914, 1028, 1492
MflI	RGATCY	3 cut(s)	442, 914, 1492
MhlI	GDGCHC	2 cut(s)	977, 1510
MlyI	GAGTC	3 cut(s)	304, 585, 821
MmeI	TCCRAC	2 cut(s)	733, 1592
Mph1103I	ATGCAT	2 cut(s)	125, 1187
MroXI	GAANNNNTTC	2 cut(s)	705, 1620
MseI	TTAA	5 cut(s)	227, 536, 639, 1128, 1661
MspA1I	CMGCKG	3 cut(s)	146, 584, 605
MspI	CCGG	7 cut(s)	11, 110, 254, 275, 1078, 1278, 1582
MspR9I	CCNGG	7 cut(s)	80, 406, 440, 549, 839, 928, 1279
Mva1269I	GAATGC	1 cut(s)	1187
MvaI	CCWGG	6 cut(s)	80, 406, 440, 549, 839, 928
MwoI	GCNNNNNNNGC	4 cut(s)	115, 152, 722, 1625
NciI	CCSGG	1 cut(s)	1279
NcoI	CCATGG	1 cut(s)	522
NdeII	GATC	4 cut(s)	442, 914, 1028, 1492
NlaIII	CATG	5 cut(s)	484, 526, 634, 1372, 1558
NlaIV	GGNNCC	7 cut(s)	9, 258, 403, 684, 916, 1566, 1774
NmuCI	GTSAC	3 cut(s)	980, 1041, 1763
NsiI	ATGCAT	2 cut(s)	125, 1187
NspI	RCATGY	1 cut(s)	634
NspV	TTCGAA	1 cut(s)	1001
PagI	TCATGA	1 cut(s)	1368
PaqCI	CACCTGC	1 cut(s)	1084
PciSI	GCTCTTC	1 cut(s)	965
PctI	GAATGC	1 cut(s)	1187
PdmI	GAANNNNTTC	2 cut(s)	705, 1620
PfeI	GAWTC	6 cut(s)	232, 998, 1215, 1712, 1808, 1985
PflFI	GACNNNGTC	2 cut(s)	830, 1312
PfoI	TCCNGGA	1 cut(s)	438
PinAI	ACCGGT	1 cut(s)	1077
PkrI	GCNGC	4 cut(s)	97, 428, 1630, 1633
PleI	GAGTC	3 cut(s)	303, 584, 821
PpsI	GAGTC	3 cut(s)	303, 584, 821
Ppu21I	YACGTR	1 cut(s)	1938
PpuMI	RGGWCCY	1 cut(s)	1603
PshBI	ATTAAT	1 cut(s)	1128
Psp124BI	GAGCTC	1 cut(s)	977
Psp5II	RGGWCCY	1 cut(s)	1603
Psp6I	CCWGG	6 cut(s)	78, 404, 438, 547, 837, 926
PspFI	CCCAGC	3 cut(s)	27, 155, 580
PspGI	CCWGG	6 cut(s)	78, 404, 438, 547, 837, 926
PspN4I	GGNNCC	7 cut(s)	9, 258, 403, 684, 916, 1566, 1774
PspPI	GGNCC	8 cut(s)	82, 107, 256, 683, 1322, 1355, 1603, 1773
PspPPI	RGGWCCY	1 cut(s)	1603
PstI	CTGCAG	1 cut(s)	1492
PstNI	CAGNNNCTG	1 cut(s)	1496
PsuI	RGATCY	3 cut(s)	442, 914, 1492
PsyI	GACNNNGTC	2 cut(s)	830, 1312
PvuII	CAGCTG	2 cut(s)	146, 605
RsaI	GTAC	3 cut(s)	188, 902, 1936
RsaNI	GTAC	3 cut(s)	187, 901, 1935
SacI	GAGCTC	1 cut(s)	977
SapI	GCTCTTC	1 cut(s)	965
SaqAI	TTAA	5 cut(s)	227, 536, 639, 1128, 1661
SatI	GCNGC	4 cut(s)	96, 427, 1629, 1632
Sau3AI	GATC	4 cut(s)	442, 914, 1028, 1492
Sau96I	GGNCC	8 cut(s)	82, 107, 256, 683, 1322, 1355, 1603, 1773
SchI	GAGTC	3 cut(s)	304, 585, 821
ScrFI	CCNGG	7 cut(s)	80, 406, 440, 549, 839, 928, 1279
SduI	GDGCHC	2 cut(s)	977, 1510
SfaNI	GCATC	2 cut(s)	1194, 1390
SfcI	CTRYAG	2 cut(s)	1488, 1535
SfuI	TTCGAA	1 cut(s)	1001
SinI	GGWCC	5 cut(s)	256, 683, 1355, 1603, 1773
SmlI	CTYRAG	1 cut(s)	904
SmoI	CTYRAG	1 cut(s)	904
SnaBI	TACGTA	1 cut(s)	1938
SsiI	CCGC	2 cut(s)	260, 584
SspI	AATATT	1 cut(s)	1659
SspMI	CTAG	4 cut(s)	236, 1269, 1560, 1613
SstI	GAGCTC	1 cut(s)	977
StyD4I	CCNGG	7 cut(s)	78, 404, 438, 547, 837, 926, 1277
StyI	CCWWGG	2 cut(s)	522, 1325
TaaI	ACNGT	4 cut(s)	873, 900, 941, 1512
TaiI	ACGT	4 cut(s)	188, 591, 1923, 1940
TaqI	TCGA	3 cut(s)	1001, 1235, 1341
TatI	WGTACW	1 cut(s)	900
TfiI	GAWTC	6 cut(s)	232, 998, 1215, 1712, 1808, 1985
Tru1I	TTAA	5 cut(s)	227, 536, 639, 1128, 1661
Tru9I	TTAA	5 cut(s)	227, 536, 639, 1128, 1661
TscAI	CASTG	4 cut(s)	392, 867, 876, 1480
TseFI	GTSAC	3 cut(s)	980, 1041, 1763
TseI	GCWGC	4 cut(s)	95, 426, 1628, 1631
Tsp45I	GTSAC	3 cut(s)	980, 1041, 1763
TspGWI	ACGGA	3 cut(s)	699, 1136, 1864
TspRI	CASTG	4 cut(s)	392, 867, 876, 1480
Tth111I	GACNNNGTC	2 cut(s)	830, 1312
VpaK11BI	GGWCC	5 cut(s)	256, 683, 1355, 1603, 1773
VspI	ATTAAT	1 cut(s)	1128
XapI	RAATTY	6 cut(s)	16, 139, 1137, 1478, 1591, 1684
XbaI	TCTAGA	1 cut(s)	1612
XceI	RCATGY	1 cut(s)	634
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1783
XmnI	GAANNNNTTC	2 cut(s)	705, 1620
XspI	CTAG	4 cut(s)	236, 1269, 1560, 1613
Zsp2I	ATGCAT	2 cut(s)	125, 1187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.