Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0013566

Physical Location & Seq

Genomic Coordinates Forward (+)

15165695 .. 15169506

Gene Structure 3812 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00093810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGGAGTTTCATCTCCTTCCTACCCTTCTTCTTCTTGCTTCTCATCCTCGGCCTCGTCAAAGCTGTAATTGCTGGGCTTTGGATAGCACATTTTGTTTGGACGTACTACTGCGTAGCAAGAAGCAAGAGGCTTGGACTTGTGTTAAAGATTCTAGTGCTGGTATTACTTCCGGTGCCGCTCGTCCTTTGGCCGGTTGTTGGAGTTGTCGGGAGTCTTTTAGGTGGGATTGGATATGGGTTTTTTCTCCCCTTCTTGCGACATTTGAGGCTGTTGGTGAGAATGTCCCTGACAAGTTCTACCACTGCTTTGTAGATGGTTCCTGGTCGACAATCAAAGGAAGCTGCATAATCGTCCAGGATCTCACAGATTTTTGTTTCCTCTCTTACTTCTCCTACATGGATGAACTAATGGAACAGATACCTGCCGATGAAAAGCCCATGGATATAGAGTTAATGAAACTGCCAGGTTGTTTGTTGGTGAGTGTGATTGGAGTCCCAGCGGACGTGTCTTTGATTACAGCTGTTGCACTATGGAAAAGTCCATACATGCTGTTTAAAGGATGGAAACGGCTATTAGAAGACTTGATAGGCAGAGAGGGACCATTCTTGGAAACAGAATGTGTTCCGTTTGCTGGTCTTGCCATTCTTCTATGGCCTCTGGCAGTTGTTGGAGGTGTAGTAGCTTCTTTCTTCTGCAGCTTCTTTTTAGGACTATATAGTGGTGCTATTGTGTATCAGGAAGACTCGGTCCGCCTGGGACTTGCCTTCATAGTTTCAGTGGTTTCACTGTATGATGAATATGTAAATGATTTACTGTACTTGAGGGAGGGATCCTGCTTTCCCAGGCCGATATACCGTAGAAATATGAGCGCTTTCTCGGAGAGGAAGAGCTCTGGTGACAATGATAATAATGATTCGAAGAATGGTAGAGAAGGCTTATATAGATCAAAACTTGTGTCGCAACAATCAAGAATTTGGAAGCAGGCACACCACCGGTATAAAGCAATGCAGGTGTGGGGCTGGCTATTCAAATCTTGCGAGATTAATGGTAGAATTCTCCTCCGTGATGGTCTGATAGATGTCAAGGATGTAGAAGAATGCATCTTGAAGGGAAACTGTAAAAAGTTGGGAATCAAACTACCTGCTTGGTCGATATTACAATGTCTTCTTGTGTCAGCCAAGTCTAGTTCGTCCGGATATTCTAATTTGATTTCCATAGCTGATGATGTAGAGTTGACAAAGTCAAATGGGCCAAGGGATAAAGTGTTCGACTGGTTCATTGGACCATTGTTGATCATGAAAGAGCAAATAAGGAATATGCAACTGGACGCGAACGAAGAAATGGCTCTGAGACATGTGTTTATGAAATGCAAAAATGAAACTCCTGAGGAGTGGGATAGCACTGAATTTCCATCTGCAGATCCTGTCCGAAGGGCACAGTTGCAAGCCATATTTAGAAGTTCACATGAAGCACTGTCAGCAGACTTCAGTTCTCATACTAACAAGCATTTTCATCTCAGACTACAGGGTCTCATAGCTTCCATGTCTAGGGTGCCAACATTCAGACGCCGCTTTAGAAATTTGGTAAAGGTTCTGTATCTAGAAGCAGTTCAGGCTGCTGCTTCTGGCAATCACATAGGAGGAATATTAACTCCTGGAAAGGGCAACCAGAGTGTGATGGGAAGTGAGGACGAGAAAGAATCAAAGGAAGGAGACGAGATTGTTGTGGATGTAGCAGAACGGAATACTTGTGACAATGGGAACAAGAGTTTGATGGTAAGTGAGAACGAGAAAGAATCAAAGGAAGGAGAAGTAATTGTCCTGGATGTAGCAGAACGGAATACTTATGACAATGGGAACAAGAGTTTGATGGGAAGTGAGAAGGAAGGAGAAGAAATTTTTGTGGTCGTAGCAGAACAGAATACGTATGACAATGGGAAAAGGAGTTCAATGGGAAGTGAGAGACGGAAAGAATCGAAGGAAGGAGAAGAAATTGTTGTGGATGTAGCAGAACAGAATATTTATAACAATGGGAACATAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

681

Amino Acids

76.66

Weight (kDa)

5.44

Isoelectric Point (pI)

50.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12680
fragaria_vesca	FvH4_6g40250
malus_domestica	MD17G1121000.v1.1
prunus_persica	Prupe.3G192900_v2.0.a1 Prupe.3G192900_v2.0.a1 Prupe.3G192900_v2.0.a1 Prupe.3G192900_v2.0.a1 Prupe.3G192900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0155271
rosa_laevigata	RLG00000020834
rosa_roxburghii	Rroxscaffold_2G00093810
rosa_rugosa	Rorug02G0446500 Rorug02G0446600
rosa_samantha	Rh2AG513000 Rh2BG523600 Rh2CG498000 Rh2DG533300
rosa_wichuraiana	Rw2G042150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2025
AarI	CACCTGC	1 cut(s)	1000
AasI	GACNNNNNNGTC	1 cut(s)	1527
Acc36I	ACCTGC	3 cut(s)	430, 1000, 1150
AccB1I	GGYRCC	2 cut(s)	173, 1552
AccBSI	CCGCTC	1 cut(s)	179
AccI	GTMKAC	1 cut(s)	326
AccII	CGCG	1 cut(s)	1331
AccIII	TCCGGA	1 cut(s)	1193
AciI	CCGC	4 cut(s)	177, 500, 751, 1570
AclWI	GGATC	4 cut(s)	366, 825, 838, 1415
AcoI	YGGCCR	1 cut(s)	189
AcsI	RAATTY	5 cut(s)	972, 1053, 1406, 1579, 1896
AcuI	CTGAAG	1 cut(s)	1471
AcyI	GRCGYC	1 cut(s)	1567
AfaI	GTAC	2 cut(s)	105, 818
AfeI	AGCGCT	1 cut(s)	871
AfiI	CCNNNNNNNGG	5 cut(s)	191, 198, 632, 1548, 1661
AflIII	ACRYGT	2 cut(s)	504, 1354
AgeI	ACCGGT	1 cut(s)	993
AgsI	TTSAA	3 cut(s)	1030, 1108, 1950
AjiI	CACGTC	1 cut(s)	505
AjnI	CCWGG	7 cut(s)	320, 354, 463, 753, 842, 1654, 1821
AloI	GAACNNNNNNTCC	4 cut(s)	1250, 1282, 1930, 1962
AluBI	AGCT	8 cut(s)	63, 342, 521, 683, 699, 891, 1220, 1538
AluI	AGCT	8 cut(s)	63, 342, 521, 683, 699, 891, 1220, 1538
Alw21I	GWGCWC	1 cut(s)	893
Alw26I	GTCTC	4 cut(s)	1345, 1535, 1707, 1957
AlwI	GGATC	4 cut(s)	366, 825, 838, 1415
AlwNI	CAGNNNCTG	1 cut(s)	1424
Aor13HI	TCCGGA	1 cut(s)	1193
Aor51HI	AGCGCT	1 cut(s)	871
AoxI	GGCC	5 cut(s)	50, 189, 653, 845, 1250
ApeKI	GCWGC	4 cut(s)	342, 696, 1616, 1619
ApoI	RAATTY	5 cut(s)	972, 1053, 1406, 1579, 1896
ArsI	GACNNNNNNTTYG	2 cut(s)	941, 973
AseI	ATTAAT	1 cut(s)	1044
AsiGI	ACCGGT	1 cut(s)	993
Asp700I	GAANNNNTTC	2 cut(s)	621, 1608
AspLEI	GCGC	1 cut(s)	872
AspS9I	GGNCC	4 cut(s)	599, 748, 1250, 1283
AsuHPI	GGTGA	3 cut(s)	287, 490, 908
AsuII	TTCGAA	1 cut(s)	917
AvaII	GGWCC	3 cut(s)	599, 748, 1283
AxyI	CCTNAGG	1 cut(s)	1386
BaeGI	GKGCMC	1 cut(s)	1438
BamHI	GGATCC	1 cut(s)	830
BanI	GGYRCC	2 cut(s)	173, 1552
BanII	GRGCYC	1 cut(s)	893
BbsI	GAAGAC	3 cut(s)	585, 747, 1157
Bbv12I	GWGCWC	1 cut(s)	893
BbvI	GCAGC	4 cut(s)	329, 708, 1603, 1606
BccI	CCATC	7 cut(s)	308, 555, 1061, 1420, 1672, 1768, 1864
BceAI	ACGGC	1 cut(s)	584
BciT130I	CCWGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
BclI	TGATCA	1 cut(s)	1293
BcoDI	GTCTC	4 cut(s)	1345, 1535, 1707, 1957
BfaI	CTAG	4 cut(s)	153, 1185, 1548, 1601
BfmI	CTRYAG	3 cut(s)	694, 1416, 1523
BfoI	RGCGCY	1 cut(s)	873
BfuAI	ACCTGC	3 cut(s)	430, 1000, 1150
BisI	GCNGC	6 cut(s)	177, 343, 697, 1570, 1617, 1620
BlsI	GCNGC	6 cut(s)	178, 344, 698, 1571, 1618, 1621
Bme1390I	CCNGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
Bme18I	GGWCC	3 cut(s)	599, 748, 1283
BmgBI	CACGTC	1 cut(s)	505
BmgT120I	GGNCC	4 cut(s)	599, 748, 1250, 1283
BmiI	GGNNCC	5 cut(s)	175, 319, 600, 832, 1554
BmrFI	CCNGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
BmsI	GCATC	1 cut(s)	1110
BpiI	GAAGAC	3 cut(s)	585, 747, 1157
Bpu14I	TTCGAA	1 cut(s)	917
BpuEI	CTTGAG	1 cut(s)	841
BsaAI	YACGTR	1 cut(s)	1926
BsaHI	GRCGYC	1 cut(s)	1567
BsaI	GGTCTC	1 cut(s)	1535
BsaJI	CCNNGG	5 cut(s)	47, 438, 754, 842, 1253
BsaWI	WCCGGW	3 cut(s)	170, 993, 1193
BsaXI	ACNNNNNCTCC	2 cut(s)	663, 693
Bsc4I	CCNNNNNNNGG	5 cut(s)	191, 198, 632, 1548, 1661
Bse118I	RCCGGY	2 cut(s)	191, 993
Bse1I	ACTGG	2 cut(s)	1277, 1329
Bse21I	CCTNAGG	1 cut(s)	1386
Bse3DI	GCAATG	1 cut(s)	1011
BseAI	TCCGGA	1 cut(s)	1193
BseBI	CCWGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
BseDI	CCNNGG	5 cut(s)	47, 438, 754, 842, 1253
BseGI	GGATG	7 cut(s)	43, 406, 566, 1093, 1735, 1831, 2008
BseLI	CCNNNNNNNGG	5 cut(s)	191, 198, 632, 1548, 1661
BseMI	GCAATG	1 cut(s)	1011
BseMII	CTCAG	3 cut(s)	1340, 1377, 1531
BseNI	ACTGG	2 cut(s)	1277, 1329
BseRI	GAGGAG	2 cut(s)	1049, 1403
BseSI	GKGCMC	1 cut(s)	1438
BseXI	GCAGC	4 cut(s)	329, 708, 1603, 1606
BseYI	CCCAGC	2 cut(s)	72, 496
Bsh1236I	CGCG	1 cut(s)	1331
BshFI	GGCC	5 cut(s)	52, 191, 655, 847, 1252
BshNI	GGYRCC	2 cut(s)	173, 1552
BshTI	ACCGGT	1 cut(s)	993
BsiHKAI	GWGCWC	1 cut(s)	893
BsiSI	CCGG	4 cut(s)	171, 192, 994, 1194
BslFI	GGGAC	4 cut(s)	269, 479, 612, 771
BslI	CCNNNNNNNGG	5 cut(s)	191, 198, 632, 1548, 1661
BsmAI	GTCTC	4 cut(s)	1345, 1535, 1707, 1957
BsmBI	CGTCTC	2 cut(s)	1707, 1957
BsmFI	GGGAC	4 cut(s)	269, 479, 612, 771
BsmI	GAATGC	1 cut(s)	1103
BsnI	GGCC	5 cut(s)	52, 191, 655, 847, 1252
Bso31I	GGTCTC	1 cut(s)	1535
Bsp119I	TTCGAA	1 cut(s)	917
Bsp1286I	GDGCHC	2 cut(s)	893, 1438
Bsp13I	TCCGGA	1 cut(s)	1193
Bsp143I	GATC	5 cut(s)	358, 830, 944, 1293, 1420
Bsp19I	CCATGG	1 cut(s)	438
BspACI	CCGC	4 cut(s)	177, 500, 751, 1570
BspANI	GGCC	5 cut(s)	52, 191, 655, 847, 1252
BspCNI	CTCAG	3 cut(s)	1341, 1378, 1530
BspEI	TCCGGA	1 cut(s)	1193
BspFNI	CGCG	1 cut(s)	1331
BspHI	TCATGA	1 cut(s)	1296
BspLI	GGNNCC	5 cut(s)	175, 319, 600, 832, 1554
BspMAI	CTGCAG	2 cut(s)	698, 1420
BspMI	ACCTGC	3 cut(s)	430, 1000, 1150
BspPI	GGATC	4 cut(s)	366, 825, 838, 1415
BspQI	GCTCTTC	1 cut(s)	881
BspT104I	TTCGAA	1 cut(s)	917
BspT107I	GGYRCC	2 cut(s)	173, 1552
BspTNI	GGTCTC	1 cut(s)	1535
BsrBI	CCGCTC	1 cut(s)	179
BsrDI	GCAATG	1 cut(s)	1011
BsrFI	RCCGGY	2 cut(s)	191, 993
BsrI	ACTGG	2 cut(s)	1277, 1329
BssAI	RCCGGY	2 cut(s)	191, 993
BssECI	CCNNGG	5 cut(s)	47, 438, 754, 842, 1253
BssMI	GATC	5 cut(s)	358, 830, 944, 1293, 1420
BssNI	GRCGYC	1 cut(s)	1567
BssT1I	CCWWGG	2 cut(s)	438, 1253
Bst2UI	CCWGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
Bst4CI	ACNGT	6 cut(s)	789, 816, 857, 1118, 1440, 1476
Bst6I	CTCTTC	1 cut(s)	881
BstACI	GRCGYC	1 cut(s)	1567
BstBAI	YACGTR	1 cut(s)	1926
BstBI	TTCGAA	1 cut(s)	917
BstC8I	GCNNGC	3 cut(s)	984, 1022, 1446
BstDEI	CTNAG	3 cut(s)	1349, 1386, 1517
BstDSI	CCRYGG	1 cut(s)	438
BstF5I	GGATG	7 cut(s)	43, 406, 566, 1093, 1735, 1831, 2008
BstFNI	CGCG	1 cut(s)	1331
BstH2I	RGCGCY	1 cut(s)	873
BstHHI	GCGC	1 cut(s)	872
BstKTI	GATC	5 cut(s)	361, 833, 947, 1296, 1423
BstMAI	GTCTC	4 cut(s)	1345, 1535, 1707, 1957
BstMBI	GATC	5 cut(s)	358, 830, 944, 1293, 1420
BstMWI	GCNNNNNNNGC	4 cut(s)	69, 638, 1478, 1613
BstNI	CCWGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
BstNSI	RCATGY	2 cut(s)	550, 1358
BstSCI	CCNGG	7 cut(s)	320, 354, 463, 753, 842, 1654, 1821
BstSFI	CTRYAG	3 cut(s)	694, 1416, 1523
BstSLI	GKGCMC	1 cut(s)	1438
BstSNI	TACGTA	1 cut(s)	1926
BstUI	CGCG	1 cut(s)	1331
BstV1I	GCAGC	4 cut(s)	329, 708, 1603, 1606
BstV2I	GAAGAC	3 cut(s)	585, 747, 1157
BstX2I	RGATCY	3 cut(s)	358, 830, 1420
BstYI	RGATCY	3 cut(s)	358, 830, 1420
Bsu36I	CCTNAGG	1 cut(s)	1386
BsuRI	GGCC	5 cut(s)	52, 191, 655, 847, 1252
BtgI	CCRYGG	1 cut(s)	438
BtrI	CACGTC	1 cut(s)	505
BtsCI	GGATG	7 cut(s)	43, 406, 566, 1093, 1735, 1831, 2008
BtsI	GCAGTG	1 cut(s)	301
BtsIMutI	CAGTG	5 cut(s)	301, 783, 785, 1401, 1472
BveI	ACCTGC	3 cut(s)	430, 1000, 1150
Cac8I	GCNNGC	3 cut(s)	984, 1022, 1446
CaiI	CAGNNNCTG	1 cut(s)	1424
CciI	TCATGA	1 cut(s)	1296
CfoI	GCGC	1 cut(s)	872
Cfr10I	RCCGGY	2 cut(s)	191, 993
Cfr13I	GGNCC	4 cut(s)	599, 748, 1250, 1283
CpoI	CGGWCCG	1 cut(s)	748
CseI	GACGC	2 cut(s)	1337, 1575
Csp6I	GTAC	2 cut(s)	104, 817
CspAI	ACCGGT	1 cut(s)	993
CspI	CGGWCCG	1 cut(s)	748
CviAII	CATG	7 cut(s)	397, 439, 547, 1297, 1355, 1466, 1543
CviQI	GTAC	2 cut(s)	104, 817
DdeI	CTNAG	3 cut(s)	1349, 1386, 1517
DpnI	GATC	5 cut(s)	360, 832, 946, 1295, 1422
DpnII	GATC	5 cut(s)	358, 830, 944, 1293, 1420
DraI	TTTAAA	1 cut(s)	556
DrdI	GACNNNNNNGTC	1 cut(s)	1527
DseDI	GACNNNNNNGTC	1 cut(s)	1527
EaeI	YGGCCR	1 cut(s)	189
Eam1104I	CTCTTC	1 cut(s)	881
EarI	CTCTTC	1 cut(s)	881
EciI	GGCGGA	1 cut(s)	740
Ecl136II	GAGCTC	1 cut(s)	891
Eco105I	TACGTA	1 cut(s)	1926
Eco130I	CCWWGG	2 cut(s)	438, 1253
Eco24I	GRGCYC	1 cut(s)	893
Eco31I	GGTCTC	1 cut(s)	1535
Eco47I	GGWCC	3 cut(s)	599, 748, 1283
Eco47III	AGCGCT	1 cut(s)	871
Eco53kI	GAGCTC	1 cut(s)	891
Eco57I	CTGAAG	1 cut(s)	1471
Eco81I	CCTNAGG	1 cut(s)	1386
EcoICRI	GAGCTC	1 cut(s)	891
EcoRI	GAATTC	1 cut(s)	1053
EcoRII	CCWGG	7 cut(s)	320, 354, 463, 753, 842, 1654, 1821
EcoT14I	CCWWGG	2 cut(s)	438, 1253
EcoT22I	ATGCAT	1 cut(s)	1103
EcoT38I	GRGCYC	1 cut(s)	893
ErhI	CCWWGG	2 cut(s)	438, 1253
Esp3I	CGTCTC	2 cut(s)	1707, 1957
FaeI	CATG	7 cut(s)	400, 442, 550, 1300, 1358, 1469, 1546
FaqI	GGGAC	4 cut(s)	269, 479, 612, 771
FatI	CATG	7 cut(s)	396, 438, 546, 1296, 1354, 1465, 1542
FbaI	TGATCA	1 cut(s)	1293
FblI	GTMKAC	1 cut(s)	326
Fnu4HI	GCNGC	6 cut(s)	177, 343, 697, 1570, 1617, 1620
FokI	GGATG	7 cut(s)	30, 413, 573, 1100, 1742, 1838, 2015
FriOI	GRGCYC	1 cut(s)	893
Fsp4HI	GCNGC	6 cut(s)	177, 343, 697, 1570, 1617, 1620
FspBI	CTAG	4 cut(s)	153, 1185, 1548, 1601
GlaI	GCGC	1 cut(s)	871
GluI	GCNGC	6 cut(s)	177, 343, 697, 1570, 1617, 1620
GsaI	CCCAGC	2 cut(s)	76, 500
HaeII	RGCGCY	1 cut(s)	873
HaeIII	GGCC	5 cut(s)	52, 191, 655, 847, 1252
HapII	CCGG	4 cut(s)	171, 192, 994, 1194
HgaI	GACGC	2 cut(s)	1337, 1575
HhaI	GCGC	1 cut(s)	872
Hin1I	GRCGYC	1 cut(s)	1567
Hin1II	CATG	7 cut(s)	400, 442, 550, 1300, 1358, 1469, 1546
Hin6I	GCGC	1 cut(s)	870
HinP1I	GCGC	1 cut(s)	870
HincII	GTYRAC	2 cut(s)	327, 1236
HindII	GTYRAC	2 cut(s)	327, 1236
HinfI	GANTC	9 cut(s)	149, 212, 492, 743, 914, 1131, 1700, 1796, 1973
HpaII	CCGG	4 cut(s)	171, 192, 994, 1194
HphI	GGTGA	3 cut(s)	287, 490, 908
Hpy166II	GTNNAC	3 cut(s)	327, 1236, 1463
Hpy188I	TCNGA	6 cut(s)	880, 1074, 1350, 1430, 1520, 1565
Hpy188III	TCNNGA	8 cut(s)	209, 737, 969, 1105, 1194, 1297, 1385, 1601
Hpy8I	GTNNAC	3 cut(s)	327, 1236, 1463
HpyCH4III	ACNGT	6 cut(s)	789, 816, 857, 1118, 1440, 1476
HpyCH4IV	ACGT	3 cut(s)	102, 504, 1925
HpyCH4V	TGCA	9 cut(s)	345, 527, 696, 1009, 1101, 1321, 1371, 1418, 1444
HpyF10VI	GCNNNNNNNGC	4 cut(s)	69, 638, 1478, 1613
HpyF3I	CTNAG	3 cut(s)	1349, 1386, 1517
HpySE526I	ACGT	3 cut(s)	102, 504, 1925
Hsp92I	GRCGYC	1 cut(s)	1567
Hsp92II	CATG	7 cut(s)	400, 442, 550, 1300, 1358, 1469, 1546
HspAI	GCGC	1 cut(s)	870
Kpn2I	TCCGGA	1 cut(s)	1193
Ksp22I	TGATCA	1 cut(s)	1293
Kzo9I	GATC	5 cut(s)	358, 830, 944, 1293, 1420
LguI	GCTCTTC	1 cut(s)	881
Lsp1109I	GCAGC	4 cut(s)	329, 708, 1603, 1606
LweI	GCATC	1 cut(s)	1110
MaeI	CTAG	4 cut(s)	153, 1185, 1548, 1601
MaeII	ACGT	3 cut(s)	102, 504, 1925
MaeIII	GTNAC	2 cut(s)	896, 1751
MalI	GATC	5 cut(s)	360, 832, 946, 1295, 1422
MbiI	CCGCTC	1 cut(s)	179
MboI	GATC	5 cut(s)	358, 830, 944, 1293, 1420
MflI	RGATCY	3 cut(s)	358, 830, 1420
MhlI	GDGCHC	2 cut(s)	893, 1438
MluCI	AATT	9 cut(s)	67, 972, 1053, 1204, 1406, 1579, 1815, 1896, 1992
MlyI	GAGTC	3 cut(s)	221, 501, 737
MmeI	TCCRAC	2 cut(s)	179, 649
Mph1103I	ATGCAT	1 cut(s)	1103
MroI	TCCGGA	1 cut(s)	1193
MroXI	GAANNNNTTC	2 cut(s)	621, 1608
MseI	TTAA	5 cut(s)	144, 452, 555, 1044, 1649
MspA1I	CMGCKG	2 cut(s)	500, 521
MspI	CCGG	4 cut(s)	171, 192, 994, 1194
MspR9I	CCNGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
Mva1269I	GAATGC	1 cut(s)	1103
MvaI	CCWGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
MvnI	CGCG	1 cut(s)	1331
MwoI	GCNNNNNNNGC	4 cut(s)	69, 638, 1478, 1613
NcoI	CCATGG	1 cut(s)	438
NdeII	GATC	5 cut(s)	358, 830, 944, 1293, 1420
NlaIII	CATG	7 cut(s)	400, 442, 550, 1300, 1358, 1469, 1546
NlaIV	GGNNCC	5 cut(s)	175, 319, 600, 832, 1554
NmeAIII	GCCGAG	1 cut(s)	28
NmuCI	GTSAC	2 cut(s)	896, 1751
NsiI	ATGCAT	1 cut(s)	1103
NspI	RCATGY	2 cut(s)	550, 1358
NspV	TTCGAA	1 cut(s)	917
PagI	TCATGA	1 cut(s)	1296
PaqCI	CACCTGC	1 cut(s)	1000
PciI	ACATGT	1 cut(s)	1354
PciSI	GCTCTTC	1 cut(s)	881
PctI	GAATGC	1 cut(s)	1103
PdmI	GAANNNNTTC	2 cut(s)	621, 1608
PfeI	GAWTC	6 cut(s)	149, 914, 1131, 1700, 1796, 1973
PflFI	GACNNNGTC	2 cut(s)	746, 1240
PfoI	TCCNGGA	3 cut(s)	354, 1654, 1821
PinAI	ACCGGT	1 cut(s)	993
PkrI	GCNGC	6 cut(s)	178, 344, 698, 1571, 1618, 1621
PleI	GAGTC	3 cut(s)	220, 500, 737
PpsI	GAGTC	3 cut(s)	220, 500, 737
Ppu21I	YACGTR	1 cut(s)	1926
PscI	ACATGT	1 cut(s)	1354
PshBI	ATTAAT	1 cut(s)	1044
PsiI	TTATAA	1 cut(s)	2025
Psp124BI	GAGCTC	1 cut(s)	893
Psp6I	CCWGG	7 cut(s)	320, 354, 463, 753, 842, 1654, 1821
PspFI	CCCAGC	2 cut(s)	72, 496
PspGI	CCWGG	7 cut(s)	320, 354, 463, 753, 842, 1654, 1821
PspN4I	GGNNCC	5 cut(s)	175, 319, 600, 832, 1554
PspPI	GGNCC	4 cut(s)	599, 748, 1250, 1283
PstI	CTGCAG	2 cut(s)	698, 1420
PstNI	CAGNNNCTG	1 cut(s)	1424
PsuI	RGATCY	3 cut(s)	358, 830, 1420
PsyI	GACNNNGTC	2 cut(s)	746, 1240
PvuII	CAGCTG	1 cut(s)	521
RsaI	GTAC	2 cut(s)	105, 818
RsaNI	GTAC	2 cut(s)	104, 817
Rsr2I	CGGWCCG	1 cut(s)	748
RsrII	CGGWCCG	1 cut(s)	748
SacI	GAGCTC	1 cut(s)	893
SalI	GTCGAC	1 cut(s)	325
SapI	GCTCTTC	1 cut(s)	881
SaqAI	TTAA	5 cut(s)	144, 452, 555, 1044, 1649
SatI	GCNGC	6 cut(s)	177, 343, 697, 1570, 1617, 1620
Sau3AI	GATC	5 cut(s)	358, 830, 944, 1293, 1420
Sau96I	GGNCC	4 cut(s)	599, 748, 1250, 1283
SchI	GAGTC	3 cut(s)	221, 501, 737
ScrFI	CCNGG	7 cut(s)	322, 356, 465, 755, 844, 1656, 1823
SduI	GDGCHC	2 cut(s)	893, 1438
SfaNI	GCATC	1 cut(s)	1110
SfcI	CTRYAG	3 cut(s)	694, 1416, 1523
SfuI	TTCGAA	1 cut(s)	917
SinI	GGWCC	3 cut(s)	599, 748, 1283
SmlI	CTYRAG	1 cut(s)	820
SmoI	CTYRAG	1 cut(s)	820
SnaBI	TACGTA	1 cut(s)	1926
Sse9I	AATT	9 cut(s)	67, 972, 1053, 1204, 1406, 1579, 1815, 1896, 1992
SsiI	CCGC	4 cut(s)	177, 500, 751, 1570
SspI	AATATT	2 cut(s)	1647, 2020
SspMI	CTAG	4 cut(s)	153, 1185, 1548, 1601
SstI	GAGCTC	1 cut(s)	893
StyD4I	CCNGG	7 cut(s)	320, 354, 463, 753, 842, 1654, 1821
StyI	CCWWGG	2 cut(s)	438, 1253
TaaI	ACNGT	6 cut(s)	789, 816, 857, 1118, 1440, 1476
TaiI	ACGT	3 cut(s)	105, 507, 1928
TaqI	TCGA	5 cut(s)	326, 917, 1151, 1269, 1976
TaqII	GACCGA	1 cut(s)	736
TasI	AATT	9 cut(s)	67, 972, 1053, 1204, 1406, 1579, 1815, 1896, 1992
TatI	WGTACW	1 cut(s)	816
TauI	GCSGC	2 cut(s)	179, 1572
TfiI	GAWTC	6 cut(s)	149, 914, 1131, 1700, 1796, 1973
Tru1I	TTAA	5 cut(s)	144, 452, 555, 1044, 1649
Tru9I	TTAA	5 cut(s)	144, 452, 555, 1044, 1649
TscAI	CASTG	5 cut(s)	308, 783, 792, 1408, 1479
TseFI	GTSAC	2 cut(s)	896, 1751
TseI	GCWGC	4 cut(s)	342, 696, 1616, 1619
Tsp45I	GTSAC	2 cut(s)	896, 1751
TspGWI	ACGGA	5 cut(s)	615, 1052, 1756, 1852, 1981
TspRI	CASTG	5 cut(s)	308, 783, 792, 1408, 1479
Tth111I	GACNNNGTC	2 cut(s)	746, 1240
VpaK11BI	GGWCC	3 cut(s)	599, 748, 1283
VspI	ATTAAT	1 cut(s)	1044
XapI	RAATTY	5 cut(s)	972, 1053, 1406, 1579, 1896
XbaI	TCTAGA	1 cut(s)	1600
XceI	RCATGY	2 cut(s)	550, 1358
XmiI	GTMKAC	1 cut(s)	326
XmnI	GAANNNNTTC	2 cut(s)	621, 1608
XspI	CTAG	4 cut(s)	153, 1185, 1548, 1601
Zsp2I	ATGCAT	1 cut(s)	1103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.