RLG00000028986

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
31081434 .. 31083545
2112 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028986

Sequence Viewer

Length: 315 bp
ATGGGAAAAATCAGGTGTCCACTCTCAGACGTTTTGATTCGAGACCCTATGTGCTTTGACAACCAGGAAGCGAGGTTTCTTACTGACTTTAAAGAACTTGAGCATCTTGGAGAAGGTGGTTACAGGACAGTGGTTCGTTATAAGTGCAATCTTGATGGTGGGATATATGCTGTGAAGACAGTTAAGATTGGAGAAAACGGACTGCCTTATGAGACCGTAAGGAGCAACCATGGGCTAGCTAGTTCTTTAGTGTTGATCATGAAGATGAAGACCTTGAGGATGTTGTCCAAGTTTATTGAAGTTGATGGTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.75

Weight (kDa)

8.38

Isoelectric Point (pI)

19.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025404)

Species Orthologous Gene IDs
rosa_laevigata RLG00000028986
rosa_roxburghii Rroxscaffold_4G00310870 Rroxscaffold_4G00310910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 141
AgsI TTSAA 1 cut(s) 299
AjnI CCWGG 1 cut(s) 63
AluBI AGCT 1 cut(s) 239
AluI AGCT 1 cut(s) 239
Alw26I GTCTC 2 cut(s) 36, 206
AsuNHI GCTAGC 1 cut(s) 235
BbsI GAAGAC 2 cut(s) 182, 275
BccI CCATC 2 cut(s) 149, 299
BciT130I CCWGG 1 cut(s) 65
BclI TGATCA 1 cut(s) 255
BcoDI GTCTC 2 cut(s) 36, 206
BfaI CTAG 2 cut(s) 236, 240
Bme1390I CCNGG 1 cut(s) 65
BmrFI CCNGG 1 cut(s) 65
BmsI GCATC 1 cut(s) 112
BmtI GCTAGC 1 cut(s) 239
BpiI GAAGAC 2 cut(s) 182, 275
BpuEI CTTGAG 2 cut(s) 119, 295
BsaI GGTCTC 2 cut(s) 36, 206
BsaJI CCNNGG 1 cut(s) 229
BseBI CCWGG 1 cut(s) 65
BseDI CCNNGG 1 cut(s) 229
BseGI GGATG 1 cut(s) 285
BseMII CTCAG 1 cut(s) 39
BsmAI GTCTC 2 cut(s) 36, 206
Bso31I GGTCTC 2 cut(s) 36, 206
Bsp143I GATC 1 cut(s) 255
Bsp19I CCATGG 1 cut(s) 229
BspCNI CTCAG 1 cut(s) 38
BspHI TCATGA 1 cut(s) 258
BspOI GCTAGC 1 cut(s) 239
BspTNI GGTCTC 2 cut(s) 36, 206
BssECI CCNNGG 1 cut(s) 229
BssMI GATC 1 cut(s) 255
BssT1I CCWWGG 1 cut(s) 229
Bst2UI CCWGG 1 cut(s) 65
Bst4CI ACNGT 3 cut(s) 130, 181, 217
BstC8I GCNNGC 1 cut(s) 237
BstDEI CTNAG 1 cut(s) 25
BstDSI CCRYGG 1 cut(s) 229
BstF5I GGATG 1 cut(s) 285
BstKTI GATC 1 cut(s) 258
BstMAI GTCTC 2 cut(s) 36, 206
BstMBI GATC 1 cut(s) 255
BstNI CCWGG 1 cut(s) 65
BstSCI CCNGG 1 cut(s) 63
BstV2I GAAGAC 2 cut(s) 182, 275
BtgI CCRYGG 1 cut(s) 229
BtsCI GGATG 1 cut(s) 285
BtsIMutI CAGTG 1 cut(s) 135
Cac8I GCNNGC 1 cut(s) 237
CciI TCATGA 1 cut(s) 258
CviAII CATG 2 cut(s) 230, 259
CviJI RGCY 2 cut(s) 235, 239
CviKI_1 RGCY 2 cut(s) 235, 239
DdeI CTNAG 1 cut(s) 25
DpnI GATC 1 cut(s) 257
DpnII GATC 1 cut(s) 255
DraI TTTAAA 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 229
Eco31I GGTCTC 2 cut(s) 36, 206
EcoRII CCWGG 1 cut(s) 63
EcoT14I CCWWGG 1 cut(s) 229
ErhI CCWWGG 1 cut(s) 229
FaeI CATG 2 cut(s) 233, 262
FaiI YATR 7 cut(s) 50, 141, 166, 168, 210, 231, 260
FatI CATG 2 cut(s) 229, 258
FbaI TGATCA 1 cut(s) 255
FokI GGATG 1 cut(s) 292
FspBI CTAG 2 cut(s) 236, 240
Hin1II CATG 2 cut(s) 233, 262
HinfI GANTC 1 cut(s) 37
Hpy166II GTNNAC 1 cut(s) 20
Hpy188I TCNGA 1 cut(s) 28
Hpy188III TCNNGA 3 cut(s) 41, 152, 259
Hpy8I GTNNAC 1 cut(s) 20
HpyAV CCTTC 1 cut(s) 107
HpyCH4III ACNGT 3 cut(s) 130, 181, 217
HpyCH4IV ACGT 1 cut(s) 30
HpyCH4V TGCA 1 cut(s) 147
HpyF3I CTNAG 1 cut(s) 25
HpySE526I ACGT 1 cut(s) 30
Hsp92II CATG 2 cut(s) 233, 262
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 1 cut(s) 255
LmnI GCTCC 1 cut(s) 222
LpnPI CCDG 3 cut(s) 50, 77, 109
LweI GCATC 1 cut(s) 112
MaeI CTAG 2 cut(s) 236, 240
MaeII ACGT 1 cut(s) 30
MaeIII GTNAC 1 cut(s) 119
MalI GATC 1 cut(s) 257
MboI GATC 1 cut(s) 255
MboII GAAGA 3 cut(s) 187, 274, 280
MnlI CCTC 2 cut(s) 66, 270
MseI TTAA 3 cut(s) 90, 183, 313
MslI CAYNNNNRTG 1 cut(s) 263
MspR9I CCNGG 1 cut(s) 65
MvaI CCWGG 1 cut(s) 65
NcoI CCATGG 1 cut(s) 229
NdeII GATC 1 cut(s) 255
NheI GCTAGC 1 cut(s) 235
NlaIII CATG 2 cut(s) 233, 262
PagI TCATGA 1 cut(s) 258
PfeI GAWTC 1 cut(s) 37
PsiI TTATAA 1 cut(s) 141
Psp6I CCWGG 1 cut(s) 63
PspGI CCWGG 1 cut(s) 63
RseI CAYNNNNRTG 1 cut(s) 263
SaqAI TTAA 3 cut(s) 90, 183, 313
Sau3AI GATC 1 cut(s) 255
ScrFI CCNGG 1 cut(s) 65
SetI ASST 6 cut(s) 17, 33, 77, 118, 241, 275
SfaNI GCATC 1 cut(s) 112
SmiMI CAYNNNNRTG 1 cut(s) 263
SmlI CTYRAG 2 cut(s) 98, 274
SmoI CTYRAG 2 cut(s) 98, 274
SspMI CTAG 2 cut(s) 236, 240
StyD4I CCNGG 1 cut(s) 63
StyI CCWWGG 1 cut(s) 229
TaaI ACNGT 3 cut(s) 130, 181, 217
TaiI ACGT 1 cut(s) 33
TaqI TCGA 1 cut(s) 40
TfiI GAWTC 1 cut(s) 37
Tru1I TTAA 3 cut(s) 90, 183, 313
Tru9I TTAA 3 cut(s) 90, 183, 313
TscAI CASTG 1 cut(s) 135
TspDTI ATGAA 2 cut(s) 275, 281
TspGWI ACGGA 1 cut(s) 213
TspRI CASTG 1 cut(s) 135
XspI CTAG 2 cut(s) 236, 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.