RLG00000035671

Fusaric acid resistance protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0020405
Physical Location & Seq
Reverse (-)
70027659 .. 70028502
844 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035671

Sequence Viewer

Length: 519 bp
ATGGCAACCTCTCAAGCCCAAACTAACCGTGCCCGAGCCTTGTGGCTCACATGCCTAGCTTCGGCCTTCCGAACCGCTCTAGCTTGCACCACAGTAGCCATCACCACCCTCTACGGTGACACATTCCGTGGATTCTGGCTCGCCCTCTACGCCATTATTCAGAGCGTCGGGCCGGCTATCTTGAACCTCTGGCTGATTGGACCGGCCCGCCTTTCTAGCAGCACGACAGCTCTGGCCGTTGAGGCCACTCATTTGGTGTCCAAGCGCATAGCCTTGGGACAGATTGTGCTTGTGTACGTGATTGCTTTCATAAAGGGCGGGAGTACAGACGCCATCATGCACCCCGTGCACATGGCAGCGAGTACCGCTGTTGGGGTCCTGGCTTGTGTTCTGGCTTTGTTAGTTCCATTCCCACGCTTGGCTTGTCAAGAGGTTAAACAGAACTCAAAGCTGCTTGTGGAGAGAGAACGCTTCGGAGAGGCTCAAGCTCTTTGTGAAGGCTTTTTGTGCAGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FUSC_2

Protein Analysis

173

Amino Acids

18.49

Weight (kDa)

9.45

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020405)

Species Orthologous Gene IDs
malus_domestica MD11G1143000.v1.1
rosa_laevigata RLG00000035671
rosa_multiflora Rmu_ssc0000309.1_g000035
rosa_samantha Rh5BG433700 Rh5CG456800 Rh5DG447100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 77
AciI CCGC 4 cut(s) 75, 208, 318, 366
AcoI YGGCCR 1 cut(s) 234
AcyI GRCGYC 1 cut(s) 330
AdeI CACNNNGTG 1 cut(s) 346
AfaI GTAC 3 cut(s) 296, 325, 364
AfiI CCNNNNNNNGG 3 cut(s) 61, 372, 418
AgsI TTSAA 1 cut(s) 184
AjnI CCWGG 1 cut(s) 378
AluBI AGCT 5 cut(s) 59, 83, 230, 451, 488
AluI AGCT 5 cut(s) 59, 83, 230, 451, 488
Alw21I GWGCWC 1 cut(s) 351
Alw44I GTGCAC 1 cut(s) 347
Ama87I CYCGRG 1 cut(s) 33
AoxI GGCC 5 cut(s) 63, 170, 204, 234, 243
ApaLI GTGCAC 1 cut(s) 347
ApeKI GCWGC 3 cut(s) 219, 356, 451
AspLEI GCGC 1 cut(s) 267
AspS9I GGNCC 4 cut(s) 170, 200, 205, 376
AsuHPI GGTGA 2 cut(s) 94, 128
AvaI CYCGRG 1 cut(s) 33
AvaII GGWCC 2 cut(s) 200, 376
BaeGI GKGCMC 2 cut(s) 34, 351
Bbv12I GWGCWC 1 cut(s) 351
BbvI GCAGC 3 cut(s) 231, 368, 438
BccI CCATC 2 cut(s) 107, 341
BceAI ACGGC 1 cut(s) 221
BciT130I CCWGG 1 cut(s) 380
BfaI CTAG 3 cut(s) 56, 80, 216
BglI GCCNNNNNGGC 1 cut(s) 242
BisI GCNGC 3 cut(s) 220, 357, 452
BlsI GCNGC 3 cut(s) 221, 358, 453
Bme1390I CCNGG 1 cut(s) 380
Bme18I GGWCC 2 cut(s) 200, 376
BmeT110I CYCGRG 1 cut(s) 33
BmgT120I GGNCC 4 cut(s) 170, 200, 205, 376
BmiI GGNNCC 1 cut(s) 377
BmrFI CCNGG 1 cut(s) 380
BpuEI CTTGAG 1 cut(s) 468
BsaAI YACGTR 1 cut(s) 298
BsaHI GRCGYC 1 cut(s) 330
BsaJI CCNNGG 2 cut(s) 127, 273
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 372, 418
Bse118I RCCGGY 2 cut(s) 172, 202
BseBI CCWGG 1 cut(s) 380
BseDI CCNNGG 2 cut(s) 127, 273
BseLI CCNNNNNNNGG 3 cut(s) 61, 372, 418
BseSI GKGCMC 2 cut(s) 34, 351
BseXI GCAGC 3 cut(s) 231, 368, 438
BshFI GGCC 5 cut(s) 65, 172, 206, 236, 245
BsiHKAI GWGCWC 1 cut(s) 351
BsiHKCI CYCGRG 1 cut(s) 33
BsiSI CCGG 2 cut(s) 173, 203
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 3 cut(s) 61, 372, 418
BsmFI GGGAC 1 cut(s) 291
BsnI GGCC 5 cut(s) 65, 172, 206, 236, 245
BsoBI CYCGRG 1 cut(s) 33
Bsp1286I GDGCHC 2 cut(s) 34, 351
BspACI CCGC 4 cut(s) 75, 208, 318, 366
BspANI GGCC 5 cut(s) 65, 172, 206, 236, 245
BspLI GGNNCC 1 cut(s) 377
BsrBI CCGCTC 1 cut(s) 77
BsrFI RCCGGY 2 cut(s) 172, 202
BssAI RCCGGY 2 cut(s) 172, 202
BssECI CCNNGG 2 cut(s) 127, 273
BssNI GRCGYC 1 cut(s) 330
BssT1I CCWWGG 1 cut(s) 273
Bst2UI CCWGG 1 cut(s) 380
Bst4CI ACNGT 3 cut(s) 29, 94, 116
BstACI GRCGYC 1 cut(s) 330
BstAPI GCANNNNNTGC 1 cut(s) 346
BstBAI YACGTR 1 cut(s) 298
BstC8I GCNNGC 4 cut(s) 85, 141, 174, 208
BstDSI CCRYGG 1 cut(s) 127
BstHHI GCGC 1 cut(s) 267
BstMWI GCNNNNNNNGC 6 cut(s) 149, 216, 242, 346, 365, 507
BstNI CCWGG 1 cut(s) 380
BstNSI RCATGY 1 cut(s) 54
BstSCI CCNGG 1 cut(s) 378
BstSLI GKGCMC 2 cut(s) 34, 351
BstV1I GCAGC 3 cut(s) 231, 368, 438
BstXI CCANNNNNNTGG 1 cut(s) 253
BsuRI GGCC 5 cut(s) 65, 172, 206, 236, 245
BtgI CCRYGG 1 cut(s) 127
Cac8I GCNNGC 4 cut(s) 85, 141, 174, 208
CfoI GCGC 1 cut(s) 267
Cfr10I RCCGGY 2 cut(s) 172, 202
Cfr13I GGNCC 4 cut(s) 170, 200, 205, 376
CseI GACGC 2 cut(s) 154, 338
Csp6I GTAC 3 cut(s) 295, 324, 363
CviAII CATG 3 cut(s) 51, 337, 352
CviQI GTAC 3 cut(s) 295, 324, 363
DraIII CACNNNGTG 1 cut(s) 346
EaeI YGGCCR 1 cut(s) 234
Eco130I CCWWGG 1 cut(s) 273
Eco47I GGWCC 2 cut(s) 200, 376
Eco88I CYCGRG 1 cut(s) 33
EcoO109I RGGNCCY 1 cut(s) 376
EcoRII CCWGG 1 cut(s) 378
EcoT14I CCWWGG 1 cut(s) 273
ErhI CCWWGG 1 cut(s) 273
FaeI CATG 3 cut(s) 54, 340, 355
FaiI YATR 5 cut(s) 52, 269, 311, 338, 353
FaqI GGGAC 1 cut(s) 291
FatI CATG 3 cut(s) 50, 336, 351
FauI CCCGC 2 cut(s) 215, 311
Fnu4HI GCNGC 3 cut(s) 220, 357, 452
Fsp4HI GCNGC 3 cut(s) 220, 357, 452
FspBI CTAG 3 cut(s) 56, 80, 216
GlaI GCGC 1 cut(s) 266
GluI GCNGC 3 cut(s) 220, 357, 452
HaeIII GGCC 5 cut(s) 65, 172, 206, 236, 245
HapII CCGG 2 cut(s) 173, 203
HgaI GACGC 2 cut(s) 154, 338
HhaI GCGC 1 cut(s) 267
Hin1I GRCGYC 1 cut(s) 330
Hin1II CATG 3 cut(s) 54, 340, 355
Hin6I GCGC 1 cut(s) 265
HinP1I GCGC 1 cut(s) 265
HinfI GANTC 1 cut(s) 132
HpaII CCGG 2 cut(s) 173, 203
HphI GGTGA 2 cut(s) 94, 128
Hpy166II GTNNAC 2 cut(s) 295, 349
Hpy188I TCNGA 3 cut(s) 71, 162, 476
Hpy188III TCNNGA 2 cut(s) 181, 428
Hpy8I GTNNAC 2 cut(s) 295, 349
Hpy99I CGWCG 1 cut(s) 170
HpyAV CCTTC 2 cut(s) 76, 491
HpyCH4III ACNGT 3 cut(s) 29, 94, 116
HpyCH4IV ACGT 1 cut(s) 297
HpyCH4V TGCA 4 cut(s) 87, 340, 349, 510
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 216, 242, 346, 365, 507
HpySE526I ACGT 1 cut(s) 297
Hsp92I GRCGYC 1 cut(s) 330
Hsp92II CATG 3 cut(s) 54, 340, 355
HspAI GCGC 1 cut(s) 265
KroI GCCGGC 1 cut(s) 172
KroNI GCCGGC 1 cut(s) 174
LpnPI CCDG 8 cut(s) 121, 175, 186, 216, 218, 365, 377, 392
Lsp1109I GCAGC 3 cut(s) 231, 368, 438
MaeI CTAG 3 cut(s) 56, 80, 216
MaeII ACGT 1 cut(s) 297
MaeIII GTNAC 1 cut(s) 116
MbiI CCGCTC 1 cut(s) 77
MhlI GDGCHC 2 cut(s) 34, 351
MnlI CCTC 7 cut(s) 19, 119, 155, 197, 235, 424, 472
MroNI GCCGGC 1 cut(s) 172
MseI TTAA 1 cut(s) 435
MspA1I CMGCKG 1 cut(s) 368
MspI CCGG 2 cut(s) 173, 203
MspR9I CCNGG 1 cut(s) 380
MvaI CCWGG 1 cut(s) 380
MwoI GCNNNNNNNGC 6 cut(s) 149, 216, 242, 346, 365, 507
NaeI GCCGGC 1 cut(s) 174
NgoMIV GCCGGC 1 cut(s) 172
NlaIII CATG 3 cut(s) 54, 340, 355
NlaIV GGNNCC 1 cut(s) 377
NmuCI GTSAC 1 cut(s) 116
NspI RCATGY 1 cut(s) 54
PdiI GCCGGC 1 cut(s) 174
PfeI GAWTC 1 cut(s) 132
PkrI GCNGC 3 cut(s) 221, 358, 453
Ppu21I YACGTR 1 cut(s) 298
PpuMI RGGWCCY 1 cut(s) 376
Psp5II RGGWCCY 1 cut(s) 376
Psp6I CCWGG 1 cut(s) 378
PspGI CCWGG 1 cut(s) 378
PspN4I GGNNCC 1 cut(s) 377
PspPI GGNCC 4 cut(s) 170, 200, 205, 376
PspPPI RGGWCCY 1 cut(s) 376
RsaI GTAC 3 cut(s) 296, 325, 364
RsaNI GTAC 3 cut(s) 295, 324, 363
SaqAI TTAA 1 cut(s) 435
SatI GCNGC 3 cut(s) 220, 357, 452
Sau96I GGNCC 4 cut(s) 170, 200, 205, 376
ScrFI CCNGG 1 cut(s) 380
SduI GDGCHC 2 cut(s) 34, 351
SetI ASST 9 cut(s) 11, 61, 85, 189, 232, 300, 435, 453, 490
SfiI GGCCNNNNNGGCC 1 cut(s) 242
SinI GGWCC 2 cut(s) 200, 376
SmlI CTYRAG 2 cut(s) 12, 483
SmoI CTYRAG 2 cut(s) 12, 483
SsiI CCGC 4 cut(s) 75, 208, 318, 366
SspMI CTAG 3 cut(s) 56, 80, 216
StyD4I CCNGG 1 cut(s) 378
StyI CCWWGG 1 cut(s) 273
TaaI ACNGT 3 cut(s) 29, 94, 116
TaiI ACGT 1 cut(s) 300
TatI WGTACW 1 cut(s) 323
TfiI GAWTC 1 cut(s) 132
Tru1I TTAA 1 cut(s) 435
Tru9I TTAA 1 cut(s) 435
TseFI GTSAC 1 cut(s) 116
TseI GCWGC 3 cut(s) 219, 356, 451
Tsp45I GTSAC 1 cut(s) 116
TspDTI ATGAA 1 cut(s) 298
TspGWI ACGGA 1 cut(s) 116
VneI GTGCAC 1 cut(s) 347
VpaK11BI GGWCC 2 cut(s) 200, 376
XceI RCATGY 1 cut(s) 54
XspI CTAG 3 cut(s) 56, 80, 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.