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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_co7989702.1_g000001 Rmu_sc0000185.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00011930 Rroxscaffold_5G00377720 Rroxscaffold_6G00395160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 394 |
| AccB1I | GGYRCC | 1 cut(s) | 277 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 222 |
| AclWI | GGATC | 1 cut(s) | 195 |
| AcsI | RAATTY | 1 cut(s) | 69 |
| AcvI | CACGTG | 2 cut(s) | 152, 170 |
| AfaI | GTAC | 1 cut(s) | 165 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 222, 329 |
| AgsI | TTSAA | 1 cut(s) | 37 |
| AjiI | CACGTC | 1 cut(s) | 182 |
| AjnI | CCWGG | 1 cut(s) | 47 |
| AluBI | AGCT | 1 cut(s) | 326 |
| AluI | AGCT | 1 cut(s) | 326 |
| Alw26I | GTCTC | 2 cut(s) | 53, 201 |
| AlwI | GGATC | 1 cut(s) | 195 |
| AoxI | GGCC | 2 cut(s) | 50, 244 |
| ApeKI | GCWGC | 1 cut(s) | 384 |
| ApoI | RAATTY | 1 cut(s) | 69 |
| AspS9I | GGNCC | 3 cut(s) | 51, 199, 245 |
| AsuHPI | GGTGA | 1 cut(s) | 248 |
| AvaII | GGWCC | 1 cut(s) | 199 |
| BanI | GGYRCC | 1 cut(s) | 277 |
| BbrPI | CACGTG | 2 cut(s) | 152, 170 |
| BccI | CCATC | 1 cut(s) | 227 |
| BciT130I | CCWGG | 1 cut(s) | 49 |
| BcoDI | GTCTC | 2 cut(s) | 53, 201 |
| BfaI | CTAG | 1 cut(s) | 249 |
| BfmI | CTRYAG | 1 cut(s) | 327 |
| BisI | GCNGC | 1 cut(s) | 385 |
| BlsI | GCNGC | 1 cut(s) | 386 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| Bme18I | GGWCC | 1 cut(s) | 199 |
| BmgBI | CACGTC | 1 cut(s) | 182 |
| BmgT120I | GGNCC | 3 cut(s) | 51, 199, 245 |
| BmiI | GGNNCC | 1 cut(s) | 279 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BsaAI | YACGTR | 2 cut(s) | 152, 170 |
| BsaI | GGTCTC | 1 cut(s) | 201 |
| BsaJI | CCNNGG | 1 cut(s) | 202 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 222, 329 |
| BseBI | CCWGG | 1 cut(s) | 49 |
| BseDI | CCNNGG | 1 cut(s) | 202 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 222, 329 |
| BshFI | GGCC | 2 cut(s) | 52, 246 |
| BshNI | GGYRCC | 1 cut(s) | 277 |
| BslFI | GGGAC | 1 cut(s) | 192 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 222, 329 |
| BsmAI | GTCTC | 2 cut(s) | 53, 201 |
| BsmFI | GGGAC | 1 cut(s) | 192 |
| BsnI | GGCC | 2 cut(s) | 52, 246 |
| Bso31I | GGTCTC | 1 cut(s) | 201 |
| Bsp143I | GATC | 1 cut(s) | 187 |
| BspANI | GGCC | 2 cut(s) | 52, 246 |
| BspLI | GGNNCC | 1 cut(s) | 279 |
| BspPI | GGATC | 1 cut(s) | 195 |
| BspT107I | GGYRCC | 1 cut(s) | 277 |
| BspTNI | GGTCTC | 1 cut(s) | 201 |
| BssECI | CCNNGG | 1 cut(s) | 202 |
| BssMI | GATC | 1 cut(s) | 187 |
| Bst2UI | CCWGG | 1 cut(s) | 49 |
| Bst4CI | ACNGT | 2 cut(s) | 203, 363 |
| BstBAI | YACGTR | 2 cut(s) | 152, 170 |
| BstDEI | CTNAG | 2 cut(s) | 227, 282 |
| BstDSI | CCRYGG | 1 cut(s) | 202 |
| BstKTI | GATC | 1 cut(s) | 190 |
| BstMAI | GTCTC | 2 cut(s) | 53, 201 |
| BstMBI | GATC | 1 cut(s) | 187 |
| BstNI | CCWGG | 1 cut(s) | 49 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BstSFI | CTRYAG | 1 cut(s) | 327 |
| BsuRI | GGCC | 2 cut(s) | 52, 246 |
| BtgI | CCRYGG | 1 cut(s) | 202 |
| BtrI | CACGTC | 1 cut(s) | 182 |
| BtsIMutI | CAGTG | 1 cut(s) | 315 |
| Cfr13I | GGNCC | 3 cut(s) | 51, 199, 245 |
| Csp6I | GTAC | 1 cut(s) | 164 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 163, 198 |
| CviJI | RGCY | 6 cut(s) | 52, 80, 226, 246, 326, 387 |
| CviKI_1 | RGCY | 6 cut(s) | 52, 80, 226, 246, 326, 387 |
| CviQI | GTAC | 1 cut(s) | 164 |
| DdeI | CTNAG | 2 cut(s) | 227, 282 |
| DpnI | GATC | 1 cut(s) | 189 |
| DpnII | GATC | 1 cut(s) | 187 |
| Eco31I | GGTCTC | 1 cut(s) | 201 |
| Eco47I | GGWCC | 1 cut(s) | 199 |
| Eco72I | CACGTG | 2 cut(s) | 152, 170 |
| EcoRII | CCWGG | 1 cut(s) | 47 |
| FaiI | YATR | 7 cut(s) | 21, 87, 197, 223, 258, 329, 394 |
| FaqI | GGGAC | 1 cut(s) | 192 |
| Fnu4HI | GCNGC | 1 cut(s) | 385 |
| Fsp4HI | GCNGC | 1 cut(s) | 385 |
| FspBI | CTAG | 1 cut(s) | 249 |
| GluI | GCNGC | 1 cut(s) | 385 |
| HaeIII | GGCC | 2 cut(s) | 52, 246 |
| HinfI | GANTC | 2 cut(s) | 140, 239 |
| HphI | GGTGA | 1 cut(s) | 248 |
| Hpy188III | TCNNGA | 2 cut(s) | 356, 366 |
| HpyCH4III | ACNGT | 2 cut(s) | 203, 363 |
| HpyCH4IV | ACGT | 3 cut(s) | 151, 169, 181 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 119, 271 |
| HpyF3I | CTNAG | 2 cut(s) | 227, 282 |
| HpySE526I | ACGT | 3 cut(s) | 151, 169, 181 |
| Kzo9I | GATC | 1 cut(s) | 187 |
| LpnPI | CCDG | 4 cut(s) | 34, 61, 228, 336 |
| MaeI | CTAG | 1 cut(s) | 249 |
| MaeII | ACGT | 3 cut(s) | 151, 169, 181 |
| MalI | GATC | 1 cut(s) | 189 |
| MboI | GATC | 1 cut(s) | 187 |
| MluCI | AATT | 2 cut(s) | 69, 82 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MnlI | CCTC | 6 cut(s) | 9, 19, 70, 122, 125, 222 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| MvaI | CCWGG | 1 cut(s) | 49 |
| NdeII | GATC | 1 cut(s) | 187 |
| NlaIV | GGNNCC | 1 cut(s) | 279 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 187 |
| PfeI | GAWTC | 2 cut(s) | 140, 239 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 222 |
| PkrI | GCNGC | 1 cut(s) | 386 |
| PmaCI | CACGTG | 2 cut(s) | 152, 170 |
| PmlI | CACGTG | 2 cut(s) | 152, 170 |
| Ppu21I | YACGTR | 2 cut(s) | 152, 170 |
| PsiI | TTATAA | 1 cut(s) | 394 |
| Psp6I | CCWGG | 1 cut(s) | 47 |
| PspCI | CACGTG | 2 cut(s) | 152, 170 |
| PspGI | CCWGG | 1 cut(s) | 47 |
| PspN4I | GGNNCC | 1 cut(s) | 279 |
| PspPI | GGNCC | 3 cut(s) | 51, 199, 245 |
| RsaI | GTAC | 1 cut(s) | 165 |
| RsaNI | GTAC | 1 cut(s) | 164 |
| SatI | GCNGC | 1 cut(s) | 385 |
| Sau3AI | GATC | 1 cut(s) | 187 |
| Sau96I | GGNCC | 3 cut(s) | 51, 199, 245 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SfcI | CTRYAG | 1 cut(s) | 327 |
| SinI | GGWCC | 1 cut(s) | 199 |
| Sse9I | AATT | 2 cut(s) | 69, 82 |
| SspMI | CTAG | 1 cut(s) | 249 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| TaaI | ACNGT | 2 cut(s) | 203, 363 |
| TaiI | ACGT | 3 cut(s) | 154, 172, 184 |
| TasI | AATT | 2 cut(s) | 69, 82 |
| TfiI | GAWTC | 2 cut(s) | 140, 239 |
| TscAI | CASTG | 1 cut(s) | 322 |
| TseI | GCWGC | 1 cut(s) | 384 |
| TspRI | CASTG | 1 cut(s) | 322 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 222 |
| VpaK11BI | GGWCC | 1 cut(s) | 199 |
| XapI | RAATTY | 1 cut(s) | 69 |
| XspI | CTAG | 1 cut(s) | 249 |