Rmu_co7995866.1_g000001

Galactose oxidase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7995866.1
Physical Location & Seq
Reverse (-)
41 .. 502
462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co7995866.1_g000001.1.cds

Sequence Viewer

Length: 462 bp
ctgctacgtgatggtagagtgcttgttggaggtagtaaccctcatattcgttacgagttcacaaacgtgcttttcccaaccgaacttgccttagaagcattctctcctaattacttggacttgcaattcgcaagtatacgtccgagcatctattcacctcagtcacaagttacggttggttatggacagaagctagccgttcgaatttcgataacgggtagaatacaactgaattcggtgtatgttacgatggtgtcaccttcatttactacgcattcgttctcgatgaaccagaggctagtggttcttgattccgagaatgttagagcagtggggaacttgaagtttgaaattcaggttacgacgccggcttccggtaatcttgcaccgtccggatattatcttgtatatgtggttcatcagcagattccaagtgagggtatttgggtcaagatccagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

153

Amino Acids

17.02

Weight (kDa)

9.01

Isoelectric Point (pI)

34.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022343)

Species Orthologous Gene IDs
malus_domestica MD15G1068800.v1.1
pyrus_communis pycom08g06720
rosa_multiflora Rmu_co7995866.1_g000001
rosa_roxburghii Rroxscaffold_7G00165910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 136
AccIII TCCGGA 1 cut(s) 392
AclWI GGATC 1 cut(s) 448
AcsI RAATTY 3 cut(s) 204, 232, 351
AcyI GRCGYC 1 cut(s) 365
AfiI CCNNNNNNNGG 2 cut(s) 374, 437
AgsI TTSAA 2 cut(s) 343, 350
AleI CACNNNNGTG 1 cut(s) 65
AluBI AGCT 1 cut(s) 193
AluI AGCT 1 cut(s) 193
AlwI GGATC 1 cut(s) 448
Aor13HI TCCGGA 1 cut(s) 392
ApoI RAATTY 3 cut(s) 204, 232, 351
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AsuHPI GGTGA 2 cut(s) 147, 249
AsuII TTCGAA 1 cut(s) 202
AsuNHI GCTAGC 1 cut(s) 193
BccI CCATC 2 cut(s) 5, 244
BceAI ACGGC 1 cut(s) 182
BfaI CTAG 2 cut(s) 194, 299
BmsI GCATC 1 cut(s) 156
BmtI GCTAGC 1 cut(s) 197
Bpu14I TTCGAA 1 cut(s) 202
BsaAI YACGTR 1 cut(s) 8
BsaHI GRCGYC 1 cut(s) 365
BsaWI WCCGGW 2 cut(s) 374, 392
Bsc4I CCNNNNNNNGG 2 cut(s) 374, 437
Bse118I RCCGGY 1 cut(s) 367
Bse1I ACTGG 1 cut(s) 457
BseAI TCCGGA 1 cut(s) 392
BseLI CCNNNNNNNGG 2 cut(s) 374, 437
BseMII CTCAG 1 cut(s) 173
BseNI ACTGG 1 cut(s) 457
BsiSI CCGG 3 cut(s) 368, 375, 393
BslI CCNNNNNNNGG 2 cut(s) 374, 437
BsmI GAATGC 2 cut(s) 98, 274
Bsp119I TTCGAA 1 cut(s) 202
Bsp13I TCCGGA 1 cut(s) 392
Bsp143I GATC 1 cut(s) 453
BspCNI CTCAG 1 cut(s) 172
BspEI TCCGGA 1 cut(s) 392
BspOI GCTAGC 1 cut(s) 197
BspPI GGATC 1 cut(s) 448
BspT104I TTCGAA 1 cut(s) 202
BsrFI RCCGGY 1 cut(s) 367
BsrI ACTGG 1 cut(s) 457
BssAI RCCGGY 1 cut(s) 367
BssMI GATC 1 cut(s) 453
BssNAI GTATAC 1 cut(s) 137
BssNI GRCGYC 1 cut(s) 365
Bst1107I GTATAC 1 cut(s) 137
Bst4CI ACNGT 2 cut(s) 175, 390
BstACI GRCGYC 1 cut(s) 365
BstBAI YACGTR 1 cut(s) 8
BstBI TTCGAA 1 cut(s) 202
BstC8I GCNNGC 2 cut(s) 195, 369
BstDEI CTNAG 2 cut(s) 91, 159
BstKTI GATC 1 cut(s) 456
BstMBI GATC 1 cut(s) 453
BstMWI GCNNNNNNNGC 1 cut(s) 95
BstX2I RGATCY 1 cut(s) 453
BstYI RGATCY 1 cut(s) 453
BstZ17I GTATAC 1 cut(s) 137
BtsI GCAGTG 1 cut(s) 336
BtsIMutI CAGTG 1 cut(s) 336
Cac8I GCNNGC 2 cut(s) 195, 369
Cfr10I RCCGGY 1 cut(s) 367
CseI GACGC 1 cut(s) 373
CviJI RGCY 4 cut(s) 193, 197, 298, 371
CviKI_1 RGCY 4 cut(s) 193, 197, 298, 371
DdeI CTNAG 2 cut(s) 91, 159
DpnI GATC 1 cut(s) 455
DpnII GATC 1 cut(s) 453
EcoRI GAATTC 1 cut(s) 232
FaiI YATR 6 cut(s) 45, 137, 183, 243, 409, 411
FblI GTMKAC 1 cut(s) 136
FspBI CTAG 2 cut(s) 194, 299
HapII CCGG 3 cut(s) 368, 375, 393
HgaI GACGC 1 cut(s) 373
Hin1I GRCGYC 1 cut(s) 365
HinfI GANTC 2 cut(s) 311, 427
HpaII CCGG 3 cut(s) 368, 375, 393
HphI GGTGA 2 cut(s) 147, 249
Hpy166II GTNNAC 2 cut(s) 60, 137
Hpy188I TCNGA 2 cut(s) 144, 316
Hpy188III TCNNGA 4 cut(s) 283, 308, 393, 451
Hpy8I GTNNAC 2 cut(s) 60, 137
Hpy99I CGWCG 1 cut(s) 367
HpyAV CCTTC 1 cut(s) 270
HpyCH4III ACNGT 2 cut(s) 175, 390
HpyCH4IV ACGT 3 cut(s) 7, 66, 139
HpyCH4V TGCA 2 cut(s) 124, 386
HpyF10VI GCNNNNNNNGC 1 cut(s) 95
HpyF3I CTNAG 2 cut(s) 91, 159
HpySE526I ACGT 3 cut(s) 7, 66, 139
Hsp92I GRCGYC 1 cut(s) 365
Kpn2I TCCGGA 1 cut(s) 392
KroI GCCGGC 1 cut(s) 367
KroNI GCCGGC 1 cut(s) 369
Kzo9I GATC 1 cut(s) 453
LpnPI CCDG 5 cut(s) 305, 341, 381, 388, 406
LweI GCATC 1 cut(s) 156
MaeI CTAG 2 cut(s) 194, 299
MaeII ACGT 3 cut(s) 7, 66, 139
MaeIII GTNAC 7 cut(s) 35, 50, 162, 169, 244, 255, 358
MalI GATC 1 cut(s) 455
MboI GATC 1 cut(s) 453
MflI RGATCY 1 cut(s) 453
MluCI AATT 5 cut(s) 109, 125, 204, 232, 351
MmeI TCCRAC 1 cut(s) 7
MnlI CCTC 5 cut(s) 23, 51, 168, 288, 430
MroI TCCGGA 1 cut(s) 392
MroNI GCCGGC 1 cut(s) 367
MslI CAYNNNNRTG 1 cut(s) 65
MspI CCGG 3 cut(s) 368, 375, 393
Mva1269I GAATGC 2 cut(s) 98, 274
MwoI GCNNNNNNNGC 1 cut(s) 95
NaeI GCCGGC 1 cut(s) 369
NdeII GATC 1 cut(s) 453
NgoMIV GCCGGC 1 cut(s) 367
NheI GCTAGC 1 cut(s) 193
NmuCI GTSAC 2 cut(s) 162, 255
NspV TTCGAA 1 cut(s) 202
OliI CACNNNNGTG 1 cut(s) 65
PctI GAATGC 2 cut(s) 98, 274
PdiI GCCGGC 1 cut(s) 369
PfeI GAWTC 2 cut(s) 311, 427
Ppu21I YACGTR 1 cut(s) 8
PsrI GAACNNNNNNTAC 2 cut(s) 399, 431
PsuI RGATCY 1 cut(s) 453
RseI CAYNNNNRTG 1 cut(s) 65
Sau3AI GATC 1 cut(s) 453
SetI ASST 8 cut(s) 10, 34, 69, 142, 160, 195, 262, 360
SfaNI GCATC 1 cut(s) 156
SfuI TTCGAA 1 cut(s) 202
SmiMI CAYNNNNRTG 1 cut(s) 65
Sse9I AATT 5 cut(s) 109, 125, 204, 232, 351
SspMI CTAG 2 cut(s) 194, 299
TaaI ACNGT 2 cut(s) 175, 390
TaiI ACGT 3 cut(s) 10, 69, 142
TaqI TCGA 3 cut(s) 202, 209, 284
TasI AATT 5 cut(s) 109, 125, 204, 232, 351
TfiI GAWTC 2 cut(s) 311, 427
TscAI CASTG 1 cut(s) 336
TseFI GTSAC 2 cut(s) 162, 255
Tsp45I GTSAC 2 cut(s) 162, 255
TspDTI ATGAA 3 cut(s) 252, 302, 407
TspRI CASTG 1 cut(s) 336
XapI RAATTY 3 cut(s) 204, 232, 351
XmiI GTMKAC 1 cut(s) 136
XspI CTAG 2 cut(s) 194, 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.