Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44935 |
| rosa_multiflora | Rmu_co8073478.1_g000001 Rmu_sc0002435.1_g000021 Rmu_sc0008797.1_g000006 Rmu_sc0009015.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00342900 |
| rosa_rugosa | Rorug03G0033700 |
| rosa_samantha | Rh3CG050100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 20 |
| AciI | CCGC | 2 cut(s) | 127, 176 |
| AfaI | GTAC | 1 cut(s) | 98 |
| AluBI | AGCT | 1 cut(s) | 235 |
| AluI | AGCT | 1 cut(s) | 235 |
| AoxI | GGCC | 2 cut(s) | 128, 219 |
| AseI | ATTAAT | 1 cut(s) | 203 |
| AspLEI | GCGC | 1 cut(s) | 22 |
| AspS9I | GGNCC | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 3 cut(s) | 52, 95, 124 |
| BccI | CCATC | 1 cut(s) | 178 |
| BfaI | CTAG | 1 cut(s) | 236 |
| BisI | GCNGC | 1 cut(s) | 128 |
| BlsI | GCNGC | 1 cut(s) | 129 |
| BmcAI | AGTACT | 1 cut(s) | 98 |
| BmgT120I | GGNCC | 1 cut(s) | 129 |
| BmsI | GCATC | 1 cut(s) | 76 |
| BsaJI | CCNNGG | 1 cut(s) | 222 |
| BseDI | CCNNGG | 1 cut(s) | 222 |
| BseGI | GGATG | 1 cut(s) | 189 |
| BseYI | CCCAGC | 2 cut(s) | 170, 195 |
| Bsh1236I | CGCG | 1 cut(s) | 20 |
| BshFI | GGCC | 2 cut(s) | 130, 221 |
| BsmI | GAATGC | 2 cut(s) | 129, 197 |
| BsnI | GGCC | 2 cut(s) | 130, 221 |
| BspACI | CCGC | 2 cut(s) | 127, 176 |
| BspANI | GGCC | 2 cut(s) | 130, 221 |
| BspFNI | CGCG | 1 cut(s) | 20 |
| BssECI | CCNNGG | 1 cut(s) | 222 |
| BssT1I | CCWWGG | 1 cut(s) | 222 |
| Bst4CI | ACNGT | 1 cut(s) | 43 |
| BstF5I | GGATG | 1 cut(s) | 189 |
| BstFNI | CGCG | 1 cut(s) | 20 |
| BstHHI | GCGC | 1 cut(s) | 22 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 26 |
| BstUI | CGCG | 1 cut(s) | 20 |
| BsuRI | GGCC | 2 cut(s) | 130, 221 |
| BtsCI | GGATG | 1 cut(s) | 189 |
| CfoI | GCGC | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 1 cut(s) | 129 |
| Csp6I | GTAC | 1 cut(s) | 97 |
| CviJI | RGCY | 3 cut(s) | 130, 221, 235 |
| CviKI_1 | RGCY | 3 cut(s) | 130, 221, 235 |
| CviQI | GTAC | 1 cut(s) | 97 |
| EciI | GGCGGA | 1 cut(s) | 191 |
| Eco130I | CCWWGG | 1 cut(s) | 222 |
| EcoT14I | CCWWGG | 1 cut(s) | 222 |
| EcoT22I | ATGCAT | 1 cut(s) | 31 |
| ErhI | CCWWGG | 1 cut(s) | 222 |
| FaiI | YATR | 2 cut(s) | 31, 39 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 83, 115 |
| Fnu4HI | GCNGC | 1 cut(s) | 128 |
| FokI | GGATG | 1 cut(s) | 196 |
| Fsp4HI | GCNGC | 1 cut(s) | 128 |
| FspBI | CTAG | 1 cut(s) | 236 |
| GlaI | GCGC | 1 cut(s) | 21 |
| GluI | GCNGC | 1 cut(s) | 128 |
| GsaI | CCCAGC | 2 cut(s) | 174, 199 |
| HaeIII | GGCC | 2 cut(s) | 130, 221 |
| HhaI | GCGC | 1 cut(s) | 22 |
| Hin6I | GCGC | 1 cut(s) | 20 |
| HinP1I | GCGC | 1 cut(s) | 20 |
| HinfI | GANTC | 1 cut(s) | 15 |
| HphI | GGTGA | 3 cut(s) | 52, 95, 124 |
| Hpy166II | GTNNAC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 1 cut(s) | 14 |
| Hpy8I | GTNNAC | 1 cut(s) | 115 |
| HpyAV | CCTTC | 1 cut(s) | 211 |
| HpyCH4III | ACNGT | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 26 |
| HspAI | GCGC | 1 cut(s) | 20 |
| LpnPI | CCDG | 4 cut(s) | 89, 156, 166, 181 |
| LweI | GCATC | 1 cut(s) | 76 |
| MaeI | CTAG | 1 cut(s) | 236 |
| MluCI | AATT | 2 cut(s) | 73, 200 |
| MnlI | CCTC | 2 cut(s) | 154, 181 |
| Mph1103I | ATGCAT | 1 cut(s) | 31 |
| MseI | TTAA | 2 cut(s) | 203, 241 |
| Mva1269I | GAATGC | 2 cut(s) | 129, 197 |
| MvnI | CGCG | 1 cut(s) | 20 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 26 |
| NsiI | ATGCAT | 1 cut(s) | 31 |
| PctI | GAATGC | 2 cut(s) | 129, 197 |
| PfeI | GAWTC | 1 cut(s) | 15 |
| PkrI | GCNGC | 1 cut(s) | 129 |
| PshBI | ATTAAT | 1 cut(s) | 203 |
| PspFI | CCCAGC | 2 cut(s) | 170, 195 |
| PspPI | GGNCC | 1 cut(s) | 129 |
| RsaI | GTAC | 1 cut(s) | 98 |
| RsaNI | GTAC | 1 cut(s) | 97 |
| SaqAI | TTAA | 2 cut(s) | 203, 241 |
| SatI | GCNGC | 1 cut(s) | 128 |
| Sau96I | GGNCC | 1 cut(s) | 129 |
| ScaI | AGTACT | 1 cut(s) | 98 |
| SetI | ASST | 1 cut(s) | 237 |
| SfaNI | GCATC | 1 cut(s) | 76 |
| Sse9I | AATT | 2 cut(s) | 73, 200 |
| SsiI | CCGC | 2 cut(s) | 127, 176 |
| SspMI | CTAG | 1 cut(s) | 236 |
| StyI | CCWWGG | 1 cut(s) | 222 |
| TaaI | ACNGT | 1 cut(s) | 43 |
| TasI | AATT | 2 cut(s) | 73, 200 |
| TatI | WGTACW | 1 cut(s) | 96 |
| TauI | GCSGC | 1 cut(s) | 130 |
| TfiI | GAWTC | 1 cut(s) | 15 |
| Tru1I | TTAA | 2 cut(s) | 203, 241 |
| Tru9I | TTAA | 2 cut(s) | 203, 241 |
| TspDTI | ATGAA | 3 cut(s) | 67, 221, 230 |
| VspI | ATTAAT | 1 cut(s) | 203 |
| XspI | CTAG | 1 cut(s) | 236 |
| ZrmI | AGTACT | 1 cut(s) | 98 |
| Zsp2I | ATGCAT | 1 cut(s) | 31 |