Rmu_co8119862.1_g000001

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8119862.1
OG0023118
Physical Location & Seq
Reverse (-)
2 .. 619
618 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8119862.1_g000001.1.cds

Sequence Viewer

Length: 618 bp
ttttgggactccgcaacttcggctttggacgaggccgagaggcttgggattccgagagatgaggcttgccacaacctggtgttcttggtatgcttcaatgcttatggcggcatgaagcttttgttccctgctttgttgaagtgggttggaatagcaggacagtacttacaccgccaactccgtaatgaaatcagaaccgctgttaaagaggccggaggaaaggtaaccctatcagcattggagaagatgaacttgacaaaatcggtggtttatgaagccctgaggattgagccgccggtgccattccagtatggtaaggccaagaaggacatgatagtccgcagccatgatgctgcgtatgagatcaaggaaggggagatgttgtttggttaccaaactatagcagaaagggatccgaagattttcgagaatcctaatgagtttgtgggagataggtttgttggggagggagagaagctgttggagtacgtgtggtggtccaacggcccggagacgaagagtccgacggtggaggataagcagtgtgcagggaaagatctggtggtgctcatgaataggattctgttggtagagttcttccttcgttatgatactttc

Protein Analysis

206

Amino Acids

23.52

Weight (kDa)

5.54

Isoelectric Point (pI)

28.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0023118)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8119862.1_g000001 Rmu_sc0005816.1_g000024 Rmu_sc0009186.1_g000001 Rmu_sc0040694.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 335
AccB1I GGYRCC 1 cut(s) 298
AccB7I CCANNNNNTGG 1 cut(s) 76
AciI CCGC 6 cut(s) 12, 108, 172, 198, 293, 340
AclWI GGATC 2 cut(s) 407, 420
AfaI GTAC 2 cut(s) 164, 488
AfiI CCNNNNNNNGG 1 cut(s) 76
AflIII ACRYGT 1 cut(s) 489
AgsI TTSAA 2 cut(s) 97, 139
AhdI GACNNNNNGTC 1 cut(s) 519
AjnI CCWGG 1 cut(s) 75
AluBI AGCT 2 cut(s) 118, 478
AluI AGCT 2 cut(s) 118, 478
Alw21I GWGCWC 1 cut(s) 570
Alw26I GTCTC 1 cut(s) 506
AlwI GGATC 2 cut(s) 407, 420
AoxI GGCC 4 cut(s) 33, 210, 318, 505
ApeKI GCWGC 2 cut(s) 342, 353
Asp700I GAANNNNTTC 1 cut(s) 422
AspS9I GGNCC 2 cut(s) 498, 506
AsuC2I CCSGG 1 cut(s) 509
AvaII GGWCC 1 cut(s) 498
AxyI CCTNAGG 1 cut(s) 281
BamHI GGATCC 1 cut(s) 412
BanI GGYRCC 1 cut(s) 298
Bbv12I GWGCWC 1 cut(s) 570
BbvI GCAGC 2 cut(s) 340, 354
BceAI ACGGC 1 cut(s) 520
BciT130I CCWGG 1 cut(s) 77
BcnI CCSGG 1 cut(s) 509
BcoDI GTCTC 1 cut(s) 506
BfmI CTRYAG 1 cut(s) 399
BglII AGATCT 1 cut(s) 556
BisI GCNGC 4 cut(s) 109, 293, 343, 354
BlsI GCNGC 4 cut(s) 110, 294, 344, 355
BmcAI AGTACT 1 cut(s) 164
Bme1390I CCNGG 2 cut(s) 77, 509
Bme18I GGWCC 1 cut(s) 498
BmeRI GACNNNNNGTC 1 cut(s) 519
BmgT120I GGNCC 2 cut(s) 498, 506
BmiI GGNNCC 2 cut(s) 300, 414
BmrFI CCNGG 2 cut(s) 77, 509
BmsI GCATC 1 cut(s) 340
BpuMI CCSGG 1 cut(s) 509
BsaAI YACGTR 1 cut(s) 490
BsaXI ACNNNNNCTCC 6 cut(s) 207, 237, 368, 398, 476, 506
Bsc4I CCNNNNNNNGG 1 cut(s) 76
Bse118I RCCGGY 1 cut(s) 295
Bse1I ACTGG 1 cut(s) 307
Bse21I CCTNAGG 1 cut(s) 281
BseBI CCWGG 1 cut(s) 77
BseLI CCNNNNNNNGG 1 cut(s) 76
BseMII CTCAG 1 cut(s) 272
BseNI ACTGG 1 cut(s) 307
BseXI GCAGC 2 cut(s) 340, 354
BsgI GTGCAG 1 cut(s) 567
BshFI GGCC 4 cut(s) 35, 212, 320, 507
BshNI GGYRCC 1 cut(s) 298
BsiHKAI GWGCWC 1 cut(s) 570
BsiSI CCGG 3 cut(s) 213, 296, 509
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 1 cut(s) 76
BsmAI GTCTC 1 cut(s) 506
BsmBI CGTCTC 1 cut(s) 506
BsmFI GGGAC 1 cut(s) 20
BsnI GGCC 4 cut(s) 35, 212, 320, 507
Bsp1286I GDGCHC 1 cut(s) 570
Bsp143I GATC 3 cut(s) 363, 412, 556
BspACI CCGC 6 cut(s) 12, 108, 172, 198, 293, 340
BspANI GGCC 4 cut(s) 35, 212, 320, 507
BspCNI CTCAG 1 cut(s) 273
BspHI TCATGA 1 cut(s) 570
BspLI GGNNCC 2 cut(s) 300, 414
BspPI GGATC 2 cut(s) 407, 420
BspT107I GGYRCC 1 cut(s) 298
BsrFI RCCGGY 1 cut(s) 295
BsrI ACTGG 1 cut(s) 307
BssAI RCCGGY 1 cut(s) 295
BssMI GATC 3 cut(s) 363, 412, 556
Bst2UI CCWGG 1 cut(s) 77
Bst4CI ACNGT 2 cut(s) 162, 529
Bst6I CTCTTC 1 cut(s) 512
BstBAI YACGTR 1 cut(s) 490
BstC8I GCNNGC 1 cut(s) 67
BstDEI CTNAG 1 cut(s) 281
BstEII GGTNACC 2 cut(s) 223, 389
BstKTI GATC 3 cut(s) 366, 415, 559
BstMAI GTCTC 1 cut(s) 506
BstMBI GATC 3 cut(s) 363, 412, 556
BstMWI GCNNNNNNNGC 2 cut(s) 20, 298
BstNI CCWGG 1 cut(s) 77
BstPI GGTNACC 2 cut(s) 223, 389
BstSCI CCNGG 2 cut(s) 75, 507
BstSFI CTRYAG 1 cut(s) 399
BstV1I GCAGC 2 cut(s) 340, 354
BstX2I RGATCY 2 cut(s) 412, 556
BstYI RGATCY 2 cut(s) 412, 556
Bsu36I CCTNAGG 1 cut(s) 281
BsuRI GGCC 4 cut(s) 35, 212, 320, 507
BtsI GCAGTG 1 cut(s) 548
BtsIMutI CAGTG 1 cut(s) 548
Cac8I GCNNGC 1 cut(s) 67
CciI TCATGA 1 cut(s) 570
Cfr10I RCCGGY 1 cut(s) 295
Cfr13I GGNCC 2 cut(s) 498, 506
CsiI ACCWGGT 1 cut(s) 75
Csp6I GTAC 2 cut(s) 163, 487
CspCI CAANNNNNGTGG 2 cut(s) 246, 281
CviAII CATG 4 cut(s) 112, 331, 347, 571
CviQI GTAC 2 cut(s) 163, 487
DdeI CTNAG 1 cut(s) 281
DpnI GATC 3 cut(s) 365, 414, 558
DpnII GATC 3 cut(s) 363, 412, 556
DrdI GACNNNNNNGTC 1 cut(s) 335
DriI GACNNNNNGTC 1 cut(s) 519
DseDI GACNNNNNNGTC 1 cut(s) 335
Eam1104I CTCTTC 1 cut(s) 512
Eam1105I GACNNNNNGTC 1 cut(s) 519
EarI CTCTTC 1 cut(s) 512
Eco47I GGWCC 1 cut(s) 498
Eco81I CCTNAGG 1 cut(s) 281
Eco91I GGTNACC 2 cut(s) 223, 389
EcoO65I GGTNACC 2 cut(s) 223, 389
EcoRII CCWGG 1 cut(s) 75
Esp3I CGTCTC 1 cut(s) 506
FaeI CATG 4 cut(s) 115, 334, 350, 574
FalI AAGNNNNNCTT 2 cut(s) 236, 268
FaqI GGGAC 1 cut(s) 20
FatI CATG 4 cut(s) 111, 330, 346, 570
Fnu4HI GCNGC 4 cut(s) 109, 293, 343, 354
Fsp4HI GCNGC 4 cut(s) 109, 293, 343, 354
GluI GCNGC 4 cut(s) 109, 293, 343, 354
HaeIII GGCC 4 cut(s) 35, 212, 320, 507
HapII CCGG 3 cut(s) 213, 296, 509
Hin1II CATG 4 cut(s) 115, 334, 350, 574
HindIII AAGCTT 1 cut(s) 116
HinfI GANTC 5 cut(s) 8, 49, 430, 520, 580
HpaII CCGG 3 cut(s) 213, 296, 509
Hpy188I TCNGA 4 cut(s) 54, 194, 417, 525
Hpy188III TCNNGA 2 cut(s) 427, 571
Hpy99I CGWCG 1 cut(s) 529
HpyAV CCTTC 3 cut(s) 319, 365, 611
HpyCH4III ACNGT 2 cut(s) 162, 529
HpyCH4IV ACGT 1 cut(s) 489
HpyCH4V TGCA 1 cut(s) 548
HpyF10VI GCNNNNNNNGC 2 cut(s) 20, 298
HpyF3I CTNAG 1 cut(s) 281
HpySE526I ACGT 1 cut(s) 489
Hsp92II CATG 4 cut(s) 115, 334, 350, 574
Kzo9I GATC 3 cut(s) 363, 412, 556
Lsp1109I GCAGC 2 cut(s) 340, 354
LweI GCATC 1 cut(s) 340
MabI ACCWGGT 1 cut(s) 75
MaeII ACGT 1 cut(s) 489
MaeIII GTNAC 2 cut(s) 223, 389
MalI GATC 3 cut(s) 365, 414, 558
MboI GATC 3 cut(s) 363, 412, 556
MboII GAAGA 4 cut(s) 256, 430, 529, 589
MflI RGATCY 2 cut(s) 412, 556
MhlI GDGCHC 1 cut(s) 570
MlyI GAGTC 2 cut(s) 2, 529
MmeI TCCRAC 4 cut(s) 127, 462, 525, 548
MnlI CCTC 8 cut(s) 25, 33, 55, 202, 209, 276, 460, 526
MroXI GAANNNNTTC 1 cut(s) 422
MseI TTAA 1 cut(s) 204
MspA1I CMGCKG 1 cut(s) 200
MspI CCGG 3 cut(s) 213, 296, 509
MspR9I CCNGG 2 cut(s) 77, 509
MvaI CCWGG 1 cut(s) 77
MwoI GCNNNNNNNGC 2 cut(s) 20, 298
NciI CCSGG 1 cut(s) 509
NdeII GATC 3 cut(s) 363, 412, 556
NlaIII CATG 4 cut(s) 115, 334, 350, 574
NlaIV GGNNCC 2 cut(s) 300, 414
NmeAIII GCCGAG 1 cut(s) 61
PagI TCATGA 1 cut(s) 570
PcsI WCGNNNNNNNCGW 1 cut(s) 521
PdmI GAANNNNTTC 1 cut(s) 422
PfeI GAWTC 3 cut(s) 49, 430, 580
PflMI CCANNNNNTGG 1 cut(s) 76
PkrI GCNGC 4 cut(s) 110, 294, 344, 355
PleI GAGTC 2 cut(s) 2, 528
PpsI GAGTC 2 cut(s) 2, 528
Ppu21I YACGTR 1 cut(s) 490
Psp6I CCWGG 1 cut(s) 75
PspEI GGTNACC 2 cut(s) 223, 389
PspGI CCWGG 1 cut(s) 75
PspN4I GGNNCC 2 cut(s) 300, 414
PspPI GGNCC 2 cut(s) 498, 506
PsuI RGATCY 2 cut(s) 412, 556
RsaI GTAC 2 cut(s) 164, 488
RsaNI GTAC 2 cut(s) 163, 487
SaqAI TTAA 1 cut(s) 204
SatI GCNGC 4 cut(s) 109, 293, 343, 354
Sau3AI GATC 3 cut(s) 363, 412, 556
Sau96I GGNCC 2 cut(s) 498, 506
ScaI AGTACT 1 cut(s) 164
SchI GAGTC 2 cut(s) 2, 529
ScrFI CCNGG 2 cut(s) 77, 509
SduI GDGCHC 1 cut(s) 570
SetI ASST 6 cut(s) 78, 120, 225, 458, 480, 492
SexAI ACCWGGT 1 cut(s) 75
SfaNI GCATC 1 cut(s) 340
SfcI CTRYAG 1 cut(s) 399
SgrAI CRCCGGYG 1 cut(s) 295
SinI GGWCC 1 cut(s) 498
SsiI CCGC 6 cut(s) 12, 108, 172, 198, 293, 340
StyD4I CCNGG 2 cut(s) 75, 507
TaaI ACNGT 2 cut(s) 162, 529
TaiI ACGT 1 cut(s) 492
TaqI TCGA 1 cut(s) 426
TatI WGTACW 1 cut(s) 162
TauI GCSGC 2 cut(s) 111, 295
TfiI GAWTC 3 cut(s) 49, 430, 580
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TscAI CASTG 1 cut(s) 548
TseI GCWGC 2 cut(s) 342, 353
TspDTI ATGAA 5 cut(s) 128, 201, 263, 288, 587
TspGWI ACGGA 1 cut(s) 170
TspRI CASTG 1 cut(s) 548
Van91I CCANNNNNTGG 1 cut(s) 76
VpaK11BI GGWCC 1 cut(s) 498
XmnI GAANNNNTTC 1 cut(s) 422
ZrmI AGTACT 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.