Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD16G1056800.v1.1 |
| rosa_laevigata | RLG00000006430 |
| rosa_multiflora | Rmu_co8029904.1_g000001 Rmu_co8140092.1_g000001 Rmu_sc0002638.1_g000001 Rmu_sc0004339.1_g000017 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 84 |
| AgsI | TTSAA | 1 cut(s) | 52 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 38 |
| ApoI | RAATTY | 1 cut(s) | 84 |
| AspS9I | GGNCC | 1 cut(s) | 220 |
| AvaII | GGWCC | 1 cut(s) | 220 |
| BbsI | GAAGAC | 1 cut(s) | 21 |
| BccI | CCATC | 1 cut(s) | 251 |
| BfaI | CTAG | 1 cut(s) | 179 |
| Bme18I | GGWCC | 1 cut(s) | 220 |
| BmgT120I | GGNCC | 1 cut(s) | 220 |
| BmsI | GCATC | 1 cut(s) | 55 |
| BpiI | GAAGAC | 1 cut(s) | 21 |
| BsaBI | GATNNNNATC | 1 cut(s) | 69 |
| Bse8I | GATNNNNATC | 1 cut(s) | 69 |
| BseGI | GGATG | 1 cut(s) | 100 |
| BseJI | GATNNNNATC | 1 cut(s) | 69 |
| BspHI | TCATGA | 1 cut(s) | 61 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| BstF5I | GGATG | 1 cut(s) | 100 |
| BstV2I | GAAGAC | 1 cut(s) | 21 |
| BtgZI | GCGATG | 1 cut(s) | 21 |
| BtsCI | GGATG | 1 cut(s) | 100 |
| BtsIMutI | CAGTG | 1 cut(s) | 174 |
| CciI | TCATGA | 1 cut(s) | 61 |
| Cfr13I | GGNCC | 1 cut(s) | 220 |
| CviAII | CATG | 1 cut(s) | 62 |
| CviJI | RGCY | 2 cut(s) | 56, 78 |
| CviKI_1 | RGCY | 2 cut(s) | 56, 78 |
| Eco47I | GGWCC | 1 cut(s) | 220 |
| EcoO109I | RGGNCCY | 1 cut(s) | 220 |
| FaeI | CATG | 1 cut(s) | 65 |
| FaiI | YATR | 3 cut(s) | 63, 189, 191 |
| FatI | CATG | 1 cut(s) | 61 |
| FokI | GGATG | 1 cut(s) | 107 |
| FspBI | CTAG | 1 cut(s) | 179 |
| Hin1II | CATG | 1 cut(s) | 65 |
| HincII | GTYRAC | 1 cut(s) | 106 |
| HindII | GTYRAC | 1 cut(s) | 106 |
| HinfI | GANTC | 1 cut(s) | 244 |
| Hpy166II | GTNNAC | 1 cut(s) | 106 |
| Hpy188III | TCNNGA | 2 cut(s) | 62, 254 |
| Hpy8I | GTNNAC | 1 cut(s) | 106 |
| HpyAV | CCTTC | 2 cut(s) | 46, 208 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 1 cut(s) | 114 |
| Hsp92II | CATG | 1 cut(s) | 65 |
| LpnPI | CCDG | 3 cut(s) | 92, 117, 267 |
| LweI | GCATC | 1 cut(s) | 55 |
| MaeI | CTAG | 1 cut(s) | 179 |
| MaeIII | GTNAC | 1 cut(s) | 171 |
| MboII | GAAGA | 2 cut(s) | 23, 26 |
| MluCI | AATT | 2 cut(s) | 84, 227 |
| MmeI | TCCRAC | 1 cut(s) | 143 |
| MnlI | CCTC | 2 cut(s) | 196, 211 |
| MslI | CAYNNNNRTG | 1 cut(s) | 63 |
| NlaIII | CATG | 1 cut(s) | 65 |
| PagI | TCATGA | 1 cut(s) | 61 |
| PfeI | GAWTC | 1 cut(s) | 244 |
| PpuMI | RGGWCCY | 1 cut(s) | 220 |
| Psp5II | RGGWCCY | 1 cut(s) | 220 |
| PspPI | GGNCC | 1 cut(s) | 220 |
| PspPPI | RGGWCCY | 1 cut(s) | 220 |
| RseI | CAYNNNNRTG | 1 cut(s) | 63 |
| Sau96I | GGNCC | 1 cut(s) | 220 |
| SetI | ASST | 1 cut(s) | 222 |
| SfaNI | GCATC | 1 cut(s) | 55 |
| SinI | GGWCC | 1 cut(s) | 220 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 63 |
| Sse9I | AATT | 2 cut(s) | 84, 227 |
| SspMI | CTAG | 1 cut(s) | 179 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TasI | AATT | 2 cut(s) | 84, 227 |
| TfiI | GAWTC | 1 cut(s) | 244 |
| TscAI | CASTG | 1 cut(s) | 174 |
| TspDTI | ATGAA | 2 cut(s) | 24, 176 |
| TspRI | CASTG | 1 cut(s) | 174 |
| VpaK11BI | GGWCC | 1 cut(s) | 220 |
| XapI | RAATTY | 1 cut(s) | 84 |
| XspI | CTAG | 1 cut(s) | 179 |