Rmu_co8144048.1_g000001

Beta-glucosidase 13-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8144048.1
Physical Location & Seq
Forward (+)
1 .. 395
395 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8144048.1_g000001.1.cds

Sequence Viewer

Length: 275 bp
tagaagaggctttgattgacgatgttcgaattcagcacatcaaggatcatctcgccgctatcaaagatgccagagctgcgggagtagatgtcaacagttacataatgtgggcactgatggactgcctggagatgggatccctatacgcagttcgattcggtctcaactacactgattatctcaatgacttggccagaactccaaagaagtccgccgcctggctcaaagatttcttggcttcaaccacttcaaccactacaaccacttccacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

10.02

Weight (kDa)

5.12

Isoelectric Point (pI)

16.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0023074)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8144048.1_g000001 Rmu_sc0001602.1_g000003
rosa_samantha Rh2BG671800 Rh2BG672100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 56, 79, 212, 215
AclWI GGATC 3 cut(s) 53, 131, 144
AcoI YGGCCR 1 cut(s) 191
AcsI RAATTY 1 cut(s) 29
AfiI CCNNNNNNNGG 2 cut(s) 132, 218
AgsI TTSAA 2 cut(s) 242, 251
AjnI CCWGG 2 cut(s) 125, 217
AluBI AGCT 1 cut(s) 76
AluI AGCT 1 cut(s) 76
Alw26I GTCTC 1 cut(s) 166
AlwI GGATC 3 cut(s) 53, 131, 144
AoxI GGCC 1 cut(s) 191
ApeKI GCWGC 1 cut(s) 76
ApoI RAATTY 1 cut(s) 29
AsuII TTCGAA 1 cut(s) 27
BaeGI GKGCMC 1 cut(s) 114
BalI TGGCCA 1 cut(s) 193
BamHI GGATCC 1 cut(s) 136
BbvI GCAGC 1 cut(s) 63
BccI CCATC 2 cut(s) 111, 126
BciT130I CCWGG 2 cut(s) 127, 219
BcoDI GTCTC 1 cut(s) 166
BisI GCNGC 3 cut(s) 56, 77, 215
BlsI GCNGC 3 cut(s) 57, 78, 216
Bme1390I CCNGG 2 cut(s) 127, 219
BmiI GGNNCC 1 cut(s) 138
BmrFI CCNGG 2 cut(s) 127, 219
BmsI GCATC 1 cut(s) 57
BpmI CTGGAG 1 cut(s) 148
Bpu14I TTCGAA 1 cut(s) 27
BsaI GGTCTC 1 cut(s) 166
BsaXI ACNNNNNCTCC 2 cut(s) 74, 104
Bsc4I CCNNNNNNNGG 2 cut(s) 132, 218
BseBI CCWGG 2 cut(s) 127, 219
BseLI CCNNNNNNNGG 2 cut(s) 132, 218
BseSI GKGCMC 1 cut(s) 114
BseXI GCAGC 1 cut(s) 63
BshFI GGCC 1 cut(s) 193
BslI CCNNNNNNNGG 2 cut(s) 132, 218
BsmAI GTCTC 1 cut(s) 166
BsnI GGCC 1 cut(s) 193
Bso31I GGTCTC 1 cut(s) 166
Bsp119I TTCGAA 1 cut(s) 27
Bsp1286I GDGCHC 1 cut(s) 114
Bsp143I GATC 2 cut(s) 45, 136
BspACI CCGC 4 cut(s) 56, 79, 212, 215
BspANI GGCC 1 cut(s) 193
BspLI GGNNCC 1 cut(s) 138
BspPI GGATC 3 cut(s) 53, 131, 144
BspT104I TTCGAA 1 cut(s) 27
BspTNI GGTCTC 1 cut(s) 166
BssMI GATC 2 cut(s) 45, 136
Bst2UI CCWGG 2 cut(s) 127, 219
Bst4CI ACNGT 1 cut(s) 97
BstBI TTCGAA 1 cut(s) 27
BstKTI GATC 2 cut(s) 48, 139
BstMAI GTCTC 1 cut(s) 166
BstMBI GATC 2 cut(s) 45, 136
BstMWI GCNNNNNNNGC 1 cut(s) 76
BstNI CCWGG 2 cut(s) 127, 219
BstSCI CCNGG 2 cut(s) 125, 217
BstSLI GKGCMC 1 cut(s) 114
BstV1I GCAGC 1 cut(s) 63
BstX2I RGATCY 1 cut(s) 136
BstYI RGATCY 1 cut(s) 136
BsuRI GGCC 1 cut(s) 193
BtsIMutI CAGTG 2 cut(s) 112, 170
CviJI RGCY 5 cut(s) 10, 76, 193, 222, 238
CviKI_1 RGCY 5 cut(s) 10, 76, 193, 222, 238
DpnI GATC 2 cut(s) 47, 138
DpnII GATC 2 cut(s) 45, 136
EaeI YGGCCR 1 cut(s) 191
EciI GGCGGA 1 cut(s) 201
Eco31I GGTCTC 1 cut(s) 166
EcoRI GAATTC 1 cut(s) 29
EcoRII CCWGG 2 cut(s) 125, 217
FaiI YATR 2 cut(s) 103, 144
FauI CCCGC 1 cut(s) 72
Fnu4HI GCNGC 3 cut(s) 56, 77, 215
Fsp4HI GCNGC 3 cut(s) 56, 77, 215
GluI GCNGC 3 cut(s) 56, 77, 215
GsuI CTGGAG 1 cut(s) 148
HaeIII GGCC 1 cut(s) 193
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HinfI GANTC 1 cut(s) 155
Hpy166II GTNNAC 1 cut(s) 93
Hpy8I GTNNAC 1 cut(s) 93
HpyCH4III ACNGT 1 cut(s) 97
HpyF10VI GCNNNNNNNGC 1 cut(s) 76
Kzo9I GATC 2 cut(s) 45, 136
LpnPI CCDG 6 cut(s) 84, 112, 139, 204, 207, 231
Lsp1109I GCAGC 1 cut(s) 63
LweI GCATC 1 cut(s) 57
MaeIII GTNAC 1 cut(s) 97
MalI GATC 2 cut(s) 47, 138
MboI GATC 2 cut(s) 45, 136
MboII GAAGA 1 cut(s) 16
MflI RGATCY 1 cut(s) 136
MhlI GDGCHC 1 cut(s) 114
MlsI TGGCCA 1 cut(s) 193
MluCI AATT 1 cut(s) 29
MluNI TGGCCA 1 cut(s) 193
Mox20I TGGCCA 1 cut(s) 193
MscI TGGCCA 1 cut(s) 193
Msp20I TGGCCA 1 cut(s) 193
MspR9I CCNGG 2 cut(s) 127, 219
MvaI CCWGG 2 cut(s) 127, 219
MwoI GCNNNNNNNGC 1 cut(s) 76
NdeII GATC 2 cut(s) 45, 136
NlaIV GGNNCC 1 cut(s) 138
NspV TTCGAA 1 cut(s) 27
PfeI GAWTC 1 cut(s) 155
PkrI GCNGC 3 cut(s) 57, 78, 216
Psp6I CCWGG 2 cut(s) 125, 217
PspGI CCWGG 2 cut(s) 125, 217
PspN4I GGNNCC 1 cut(s) 138
PsuI RGATCY 1 cut(s) 136
SatI GCNGC 3 cut(s) 56, 77, 215
Sau3AI GATC 2 cut(s) 45, 136
ScrFI CCNGG 2 cut(s) 127, 219
SduI GDGCHC 1 cut(s) 114
SetI ASST 1 cut(s) 78
SfaNI GCATC 1 cut(s) 57
SfuI TTCGAA 1 cut(s) 27
Sse9I AATT 1 cut(s) 29
SsiI CCGC 4 cut(s) 56, 79, 212, 215
StyD4I CCNGG 2 cut(s) 125, 217
TaaI ACNGT 1 cut(s) 97
TaqI TCGA 2 cut(s) 27, 153
TaqII GACCGA 1 cut(s) 148
TasI AATT 1 cut(s) 29
TauI GCSGC 2 cut(s) 58, 217
TfiI GAWTC 1 cut(s) 155
TscAI CASTG 2 cut(s) 119, 177
TseI GCWGC 1 cut(s) 76
TspRI CASTG 2 cut(s) 119, 177
XapI RAATTY 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.