Ubiquitin-conjugating enzyme E2 variant
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom03g10570 pycom11g14450 |
| rosa_multiflora | Rmu_co8203264.1_g000001 |
| rosa_samantha | Rh3BG227700 Rh3DG222900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 37 |
| AfaI | GTAC | 3 cut(s) | 91, 148, 187 |
| AgsI | TTSAA | 1 cut(s) | 62 |
| AjnI | CCWGG | 1 cut(s) | 137 |
| Alw21I | GWGCWC | 1 cut(s) | 21 |
| Alw44I | GTGCAC | 1 cut(s) | 17 |
| AoxI | GGCC | 1 cut(s) | 157 |
| ApaLI | GTGCAC | 1 cut(s) | 17 |
| ApoI | RAATTY | 1 cut(s) | 37 |
| AseI | ATTAAT | 1 cut(s) | 303 |
| AspLEI | GCGC | 1 cut(s) | 135 |
| AspS9I | GGNCC | 1 cut(s) | 158 |
| BaeGI | GKGCMC | 1 cut(s) | 21 |
| Bbv12I | GWGCWC | 1 cut(s) | 21 |
| BccI | CCATC | 2 cut(s) | 80, 107 |
| BceAI | ACGGC | 1 cut(s) | 276 |
| BciT130I | CCWGG | 1 cut(s) | 139 |
| BmcAI | AGTACT | 1 cut(s) | 187 |
| Bme1390I | CCNGG | 1 cut(s) | 139 |
| BmgT120I | GGNCC | 1 cut(s) | 158 |
| BmrFI | CCNGG | 1 cut(s) | 139 |
| BmsI | GCATC | 2 cut(s) | 87, 287 |
| BpmI | CTGGAG | 1 cut(s) | 71 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 213, 243 |
| BseBI | CCWGG | 1 cut(s) | 139 |
| BseGI | GGATG | 2 cut(s) | 115, 302 |
| BseRI | GAGGAG | 6 cut(s) | 221, 224, 227, 237, 240, 243 |
| BseSI | GKGCMC | 1 cut(s) | 21 |
| BsgI | GTGCAG | 1 cut(s) | 45 |
| BshFI | GGCC | 1 cut(s) | 159 |
| BsiHKAI | GWGCWC | 1 cut(s) | 21 |
| BsnI | GGCC | 1 cut(s) | 159 |
| Bsp1286I | GDGCHC | 1 cut(s) | 21 |
| BspANI | GGCC | 1 cut(s) | 159 |
| Bst2UI | CCWGG | 1 cut(s) | 139 |
| Bst4CI | ACNGT | 2 cut(s) | 23, 94 |
| BstF5I | GGATG | 2 cut(s) | 115, 302 |
| BstHHI | GCGC | 1 cut(s) | 135 |
| BstNI | CCWGG | 1 cut(s) | 139 |
| BstSCI | CCNGG | 1 cut(s) | 137 |
| BstSLI | GKGCMC | 1 cut(s) | 21 |
| BsuRI | GGCC | 1 cut(s) | 159 |
| BtsCI | GGATG | 2 cut(s) | 115, 302 |
| BtsI | GCAGTG | 1 cut(s) | 33 |
| BtsIMutI | CAGTG | 2 cut(s) | 19, 33 |
| CfoI | GCGC | 1 cut(s) | 135 |
| Cfr13I | GGNCC | 1 cut(s) | 158 |
| CseI | GACGC | 1 cut(s) | 169 |
| Csp6I | GTAC | 3 cut(s) | 90, 147, 186 |
| CviJI | RGCY | 1 cut(s) | 159 |
| CviKI_1 | RGCY | 1 cut(s) | 159 |
| CviQI | GTAC | 3 cut(s) | 90, 147, 186 |
| EcoRII | CCWGG | 1 cut(s) | 137 |
| EcoT22I | ATGCAT | 1 cut(s) | 302 |
| FokI | GGATG | 1 cut(s) | 122 |
| GlaI | GCGC | 1 cut(s) | 134 |
| GsuI | CTGGAG | 1 cut(s) | 71 |
| HaeIII | GGCC | 1 cut(s) | 159 |
| HgaI | GACGC | 1 cut(s) | 169 |
| HhaI | GCGC | 1 cut(s) | 135 |
| Hin6I | GCGC | 1 cut(s) | 133 |
| HinP1I | GCGC | 1 cut(s) | 133 |
| HinfI | GANTC | 1 cut(s) | 277 |
| Hpy166II | GTNNAC | 1 cut(s) | 19 |
| Hpy188I | TCNGA | 1 cut(s) | 83 |
| Hpy188III | TCNNGA | 1 cut(s) | 274 |
| Hpy8I | GTNNAC | 1 cut(s) | 19 |
| HpyAV | CCTTC | 1 cut(s) | 67 |
| HpyCH4III | ACNGT | 2 cut(s) | 23, 94 |
| HpyCH4IV | ACGT | 1 cut(s) | 64 |
| HpyCH4V | TGCA | 3 cut(s) | 19, 26, 300 |
| HpySE526I | ACGT | 1 cut(s) | 64 |
| HspAI | GCGC | 1 cut(s) | 133 |
| LmnI | GCTCC | 1 cut(s) | 140 |
| LpnPI | CCDG | 4 cut(s) | 28, 35, 124, 151 |
| LweI | GCATC | 2 cut(s) | 87, 287 |
| MaeII | ACGT | 1 cut(s) | 64 |
| MhlI | GDGCHC | 1 cut(s) | 21 |
| MluCI | AATT | 2 cut(s) | 37, 153 |
| Mph1103I | ATGCAT | 1 cut(s) | 302 |
| MseI | TTAA | 1 cut(s) | 303 |
| MslI | CAYNNNNRTG | 1 cut(s) | 128 |
| MspR9I | CCNGG | 1 cut(s) | 139 |
| MvaI | CCWGG | 1 cut(s) | 139 |
| NsiI | ATGCAT | 1 cut(s) | 302 |
| PfeI | GAWTC | 1 cut(s) | 277 |
| PfoI | TCCNGGA | 1 cut(s) | 137 |
| PshBI | ATTAAT | 1 cut(s) | 303 |
| Psp6I | CCWGG | 1 cut(s) | 137 |
| PspGI | CCWGG | 1 cut(s) | 137 |
| PspPI | GGNCC | 1 cut(s) | 158 |
| RsaI | GTAC | 3 cut(s) | 91, 148, 187 |
| RsaNI | GTAC | 3 cut(s) | 90, 147, 186 |
| RseI | CAYNNNNRTG | 1 cut(s) | 128 |
| SaqAI | TTAA | 1 cut(s) | 303 |
| Sau96I | GGNCC | 1 cut(s) | 158 |
| ScaI | AGTACT | 1 cut(s) | 187 |
| ScrFI | CCNGG | 1 cut(s) | 139 |
| SduI | GDGCHC | 1 cut(s) | 21 |
| SetI | ASST | 3 cut(s) | 47, 67, 273 |
| SfaNI | GCATC | 2 cut(s) | 87, 287 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 128 |
| Sse9I | AATT | 2 cut(s) | 37, 153 |
| StyD4I | CCNGG | 1 cut(s) | 137 |
| TaaI | ACNGT | 2 cut(s) | 23, 94 |
| TaiI | ACGT | 1 cut(s) | 67 |
| TasI | AATT | 2 cut(s) | 37, 153 |
| TatI | WGTACW | 1 cut(s) | 185 |
| TfiI | GAWTC | 1 cut(s) | 277 |
| Tru1I | TTAA | 1 cut(s) | 303 |
| Tru9I | TTAA | 1 cut(s) | 303 |
| TscAI | CASTG | 2 cut(s) | 26, 33 |
| TspRI | CASTG | 2 cut(s) | 26, 33 |
| VneI | GTGCAC | 1 cut(s) | 17 |
| VspI | ATTAAT | 1 cut(s) | 303 |
| XapI | RAATTY | 1 cut(s) | 37 |
| ZrmI | AGTACT | 1 cut(s) | 187 |
| Zsp2I | ATGCAT | 1 cut(s) | 302 |