Rmu_sc0000166.1_g000051

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000166.1
Physical Location & Seq
Reverse (-)
279519 .. 280149
631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000166.1_g000051.1.cds

Sequence Viewer

Length: 447 bp
atgcaccaggcttggaagatgaggattacagtgttcactgtcttcagcaatgtggttgttctactcttgtttgctagtaacttagcctcaggaggtgcagctggtgcttcttctcttttctttgtctactctttggactatgcccgtacccaattggatgatgggtctaaggctacaaagaagggaggagaaagacaattcaatggtctgattgatgtctacaagaagacattgaaatctgatggtattgttggtctatacagtggattcaatacatcatgtgttggtatcttgtttaccgtggatagtttctttgctagctttgcttttggatgggtcgtcatcaatggtgatggtcttgcttcctacccaattgacactcttcgtagaagaatgataatgacctctggtgaagctgtcaaccacaagagttcttttggtgtttga
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

148

Amino Acids

16.05

Weight (kDa)

9.33

Isoelectric Point (pI)

25.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025472)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 126, 219
AcuI CTGAAG 1 cut(s) 28
AfaI GTAC 1 cut(s) 148
AgsI TTSAA 3 cut(s) 202, 235, 271
AjnI CCWGG 1 cut(s) 6
AluBI AGCT 3 cut(s) 101, 321, 416
AluI AGCT 3 cut(s) 101, 321, 416
ApeKI GCWGC 1 cut(s) 98
AsuHPI GGTGA 2 cut(s) 362, 422
AsuNHI GCTAGC 1 cut(s) 317
AxyI CCTNAGG 1 cut(s) 88
BbsI GAAGAC 2 cut(s) 34, 233
BbvI GCAGC 1 cut(s) 110
BccI CCATC 4 cut(s) 155, 236, 327, 347
BciT130I CCWGG 1 cut(s) 8
BfaI CTAG 2 cut(s) 75, 318
BisI GCNGC 1 cut(s) 99
BlsI GCNGC 1 cut(s) 100
Bme1390I CCNGG 1 cut(s) 8
BmrFI CCNGG 1 cut(s) 8
BmtI GCTAGC 1 cut(s) 321
BpiI GAAGAC 2 cut(s) 34, 233
BsaJI CCNNGG 1 cut(s) 300
Bse21I CCTNAGG 1 cut(s) 88
Bse3DI GCAATG 1 cut(s) 55
BseBI CCWGG 1 cut(s) 8
BseDI CCNNGG 1 cut(s) 300
BseGI GGATG 2 cut(s) 163, 338
BseMI GCAATG 1 cut(s) 55
BseMII CTCAG 1 cut(s) 102
BseRI GAGGAG 1 cut(s) 201
BseXI GCAGC 1 cut(s) 110
BsgI GTGCAG 1 cut(s) 117
BspCNI CTCAG 1 cut(s) 101
BspOI GCTAGC 1 cut(s) 321
BsrDI GCAATG 1 cut(s) 55
BssECI CCNNGG 1 cut(s) 300
Bst2UI CCWGG 1 cut(s) 8
Bst4CI ACNGT 4 cut(s) 31, 40, 263, 301
Bst6I CTCTTC 1 cut(s) 387
BstAPI GCANNNNNTGC 1 cut(s) 104
BstC8I GCNNGC 1 cut(s) 319
BstDEI CTNAG 3 cut(s) 82, 88, 168
BstDSI CCRYGG 1 cut(s) 300
BstF5I GGATG 2 cut(s) 163, 338
BstMWI GCNNNNNNNGC 2 cut(s) 104, 323
BstNI CCWGG 1 cut(s) 8
BstSCI CCNGG 1 cut(s) 6
BstV1I GCAGC 1 cut(s) 110
BstV2I GAAGAC 2 cut(s) 34, 233
Bsu36I CCTNAGG 1 cut(s) 88
BtgI CCRYGG 1 cut(s) 300
BtsCI GGATG 2 cut(s) 163, 338
BtsIMutI CAGTG 3 cut(s) 36, 36, 268
Cac8I GCNNGC 1 cut(s) 319
Csp6I GTAC 1 cut(s) 147
CviAII CATG 1 cut(s) 279
CviJI RGCY 6 cut(s) 11, 86, 101, 173, 321, 416
CviKI_1 RGCY 6 cut(s) 11, 86, 101, 173, 321, 416
CviQI GTAC 1 cut(s) 147
DdeI CTNAG 3 cut(s) 82, 88, 168
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
Eco57I CTGAAG 1 cut(s) 28
Eco81I CCTNAGG 1 cut(s) 88
EcoRII CCWGG 1 cut(s) 6
FaeI CATG 1 cut(s) 282
FaiI YATR 3 cut(s) 141, 259, 280
FatI CATG 1 cut(s) 278
FblI GTMKAC 2 cut(s) 126, 219
Fnu4HI GCNGC 1 cut(s) 99
FokI GGATG 2 cut(s) 170, 345
Fsp4HI GCNGC 1 cut(s) 99
FspBI CTAG 2 cut(s) 75, 318
GluI GCNGC 1 cut(s) 99
Hin1II CATG 1 cut(s) 282
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HinfI GANTC 1 cut(s) 267
HphI GGTGA 2 cut(s) 362, 422
Hpy166II GTNNAC 5 cut(s) 36, 127, 220, 297, 421
Hpy188I TCNGA 2 cut(s) 210, 241
Hpy188III TCNNGA 1 cut(s) 90
Hpy8I GTNNAC 5 cut(s) 36, 127, 220, 297, 421
HpyAV CCTTC 1 cut(s) 175
HpyCH4III ACNGT 4 cut(s) 31, 40, 263, 301
HpyCH4V TGCA 2 cut(s) 4, 98
HpyF10VI GCNNNNNNNGC 2 cut(s) 104, 323
HpyF3I CTNAG 3 cut(s) 82, 88, 168
Hsp92II CATG 1 cut(s) 282
LpnPI CCDG 4 cut(s) 20, 75, 87, 393
Lsp1109I GCAGC 1 cut(s) 110
MaeI CTAG 2 cut(s) 75, 318
MaeIII GTNAC 1 cut(s) 77
MboII GAAGA 6 cut(s) 28, 34, 102, 238, 374, 402
MfeI CAATTG 2 cut(s) 152, 372
MluCI AATT 3 cut(s) 152, 197, 372
MnlI CCTC 5 cut(s) 15, 86, 97, 179, 415
MspA1I CMGCKG 1 cut(s) 101
MspR9I CCNGG 1 cut(s) 8
MunI CAATTG 2 cut(s) 152, 372
MvaI CCWGG 1 cut(s) 8
MwoI GCNNNNNNNGC 2 cut(s) 104, 323
NheI GCTAGC 1 cut(s) 317
NlaIII CATG 1 cut(s) 282
PfeI GAWTC 1 cut(s) 267
PkrI GCNGC 1 cut(s) 100
Psp6I CCWGG 1 cut(s) 6
PspGI CCWGG 1 cut(s) 6
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 1 cut(s) 148
RsaNI GTAC 1 cut(s) 147
SatI GCNGC 1 cut(s) 99
ScrFI CCNGG 1 cut(s) 8
SetI ASST 5 cut(s) 97, 103, 323, 407, 418
Sse9I AATT 3 cut(s) 152, 197, 372
SspMI CTAG 2 cut(s) 75, 318
StyD4I CCNGG 1 cut(s) 6
TaaI ACNGT 4 cut(s) 31, 40, 263, 301
TasI AATT 3 cut(s) 152, 197, 372
TfiI GAWTC 1 cut(s) 267
TscAI CASTG 3 cut(s) 36, 43, 268
TseI GCWGC 1 cut(s) 98
TspRI CASTG 3 cut(s) 36, 43, 268
XcmI CCANNNNNNNNNTGG 1 cut(s) 158
XmiI GTMKAC 2 cut(s) 126, 219
XspI CTAG 2 cut(s) 75, 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.