Rmu_sc0014659.1_g000008

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014659.1
Physical Location & Seq
Forward (+)
24329 .. 24959
631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014659.1_g000008.1.cds

Sequence Viewer

Length: 453 bp
atgcaccaggcttggaagatgaggattacagtgttcactgccttcaacaatgtggttattctactcttggtttttattctagaagacaatagctgcagaggtgcagctgatgcttcttctcttttctttgtctactctttggactatgccggtacccaattggctgatgggtctaaggctgcaaagaagggaggagaaagacaattcaatggtctgattgatgtctacaagaagacattgaaatctgatggtattgttggtctatacagtggattcaatacatcatgtgttggtatcttgtttaccgtggatagtttctttgctagctttgcttttggatgggtcgtcatcaatggtgctggtcttgcttcctacccaattgacactcttcgtagaagaatgataatgacctccggtgaagctgtcaagcacaagagttcttttggtgtttga
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

150

Amino Acids

16.35

Weight (kDa)

9.17

Isoelectric Point (pI)

28.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025472)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 152
AccB1I GGYRCC 1 cut(s) 152
AccI GTMKAC 2 cut(s) 132, 225
AfaI GTAC 1 cut(s) 154
AgsI TTSAA 4 cut(s) 46, 208, 241, 277
AjnI CCWGG 1 cut(s) 6
AluBI AGCT 4 cut(s) 93, 107, 327, 422
AluI AGCT 4 cut(s) 93, 107, 327, 422
ApeKI GCWGC 3 cut(s) 93, 104, 179
Asp718I GGTACC 1 cut(s) 152
AsuHPI GGTGA 1 cut(s) 428
AsuNHI GCTAGC 1 cut(s) 323
BanI GGYRCC 1 cut(s) 152
BbsI GAAGAC 2 cut(s) 90, 239
BbvI GCAGC 3 cut(s) 80, 116, 166
BccI CCATC 3 cut(s) 161, 242, 333
BciT130I CCWGG 1 cut(s) 8
BfaI CTAG 2 cut(s) 80, 324
BfmI CTRYAG 1 cut(s) 94
BisI GCNGC 3 cut(s) 94, 105, 180
BlsI GCNGC 3 cut(s) 95, 106, 181
Bme1390I CCNGG 1 cut(s) 8
BmiI GGNNCC 1 cut(s) 154
BmrFI CCNGG 1 cut(s) 8
BmsI GCATC 1 cut(s) 100
BmtI GCTAGC 1 cut(s) 327
BpiI GAAGAC 2 cut(s) 90, 239
BsaJI CCNNGG 1 cut(s) 306
BsaWI WCCGGW 1 cut(s) 413
Bse118I RCCGGY 1 cut(s) 149
BseBI CCWGG 1 cut(s) 8
BseDI CCNNGG 1 cut(s) 306
BseGI GGATG 1 cut(s) 344
BseRI GAGGAG 1 cut(s) 207
BseXI GCAGC 3 cut(s) 80, 116, 166
BsgI GTGCAG 1 cut(s) 123
BshNI GGYRCC 1 cut(s) 152
BsiSI CCGG 2 cut(s) 150, 414
BspLI GGNNCC 1 cut(s) 154
BspMAI CTGCAG 1 cut(s) 98
BspOI GCTAGC 1 cut(s) 327
BspT107I GGYRCC 1 cut(s) 152
BsrFI RCCGGY 1 cut(s) 149
BssAI RCCGGY 1 cut(s) 149
BssECI CCNNGG 1 cut(s) 306
Bst2UI CCWGG 1 cut(s) 8
Bst4CI ACNGT 3 cut(s) 31, 269, 307
Bst6I CTCTTC 1 cut(s) 393
BstAPI GCANNNNNTGC 1 cut(s) 110
BstC8I GCNNGC 1 cut(s) 325
BstDEI CTNAG 1 cut(s) 174
BstDSI CCRYGG 1 cut(s) 306
BstF5I GGATG 1 cut(s) 344
BstMWI GCNNNNNNNGC 3 cut(s) 110, 329, 365
BstNI CCWGG 1 cut(s) 8
BstSCI CCNGG 1 cut(s) 6
BstSFI CTRYAG 1 cut(s) 94
BstV1I GCAGC 3 cut(s) 80, 116, 166
BstV2I GAAGAC 2 cut(s) 90, 239
BtgI CCRYGG 1 cut(s) 306
BtsCI GGATG 1 cut(s) 344
BtsI GCAGTG 1 cut(s) 36
BtsIMutI CAGTG 3 cut(s) 36, 36, 274
Cac8I GCNNGC 1 cut(s) 325
Cfr10I RCCGGY 1 cut(s) 149
Csp6I GTAC 1 cut(s) 153
CviAII CATG 1 cut(s) 285
CviJI RGCY 7 cut(s) 11, 93, 107, 164, 179, 327, 422
CviKI_1 RGCY 7 cut(s) 11, 93, 107, 164, 179, 327, 422
CviQI GTAC 1 cut(s) 153
DdeI CTNAG 1 cut(s) 174
Eam1104I CTCTTC 1 cut(s) 393
EarI CTCTTC 1 cut(s) 393
EcoRII CCWGG 1 cut(s) 6
FaeI CATG 1 cut(s) 288
FaiI YATR 3 cut(s) 147, 265, 286
FatI CATG 1 cut(s) 284
FblI GTMKAC 2 cut(s) 132, 225
Fnu4HI GCNGC 3 cut(s) 94, 105, 180
FokI GGATG 1 cut(s) 351
Fsp4HI GCNGC 3 cut(s) 94, 105, 180
FspBI CTAG 2 cut(s) 80, 324
GluI GCNGC 3 cut(s) 94, 105, 180
HapII CCGG 2 cut(s) 150, 414
Hin1II CATG 1 cut(s) 288
HinfI GANTC 1 cut(s) 273
HpaII CCGG 2 cut(s) 150, 414
HphI GGTGA 1 cut(s) 428
Hpy166II GTNNAC 4 cut(s) 36, 133, 226, 303
Hpy188I TCNGA 2 cut(s) 216, 247
Hpy188III TCNNGA 1 cut(s) 80
Hpy8I GTNNAC 4 cut(s) 36, 133, 226, 303
HpyAV CCTTC 2 cut(s) 52, 181
HpyCH4III ACNGT 3 cut(s) 31, 269, 307
HpyCH4V TGCA 4 cut(s) 4, 96, 104, 182
HpyF10VI GCNNNNNNNGC 3 cut(s) 110, 329, 365
HpyF3I CTNAG 1 cut(s) 174
Hsp92II CATG 1 cut(s) 288
KpnI GGTACC 1 cut(s) 156
LpnPI CCDG 4 cut(s) 20, 163, 345, 427
Lsp1109I GCAGC 3 cut(s) 80, 116, 166
LweI GCATC 1 cut(s) 100
MaeI CTAG 2 cut(s) 80, 324
MboII GAAGA 6 cut(s) 28, 95, 108, 244, 380, 408
MfeI CAATTG 2 cut(s) 158, 378
MluCI AATT 3 cut(s) 158, 203, 378
MnlI CCTC 4 cut(s) 15, 92, 185, 421
MspA1I CMGCKG 1 cut(s) 107
MspI CCGG 2 cut(s) 150, 414
MspR9I CCNGG 1 cut(s) 8
MunI CAATTG 2 cut(s) 158, 378
MvaI CCWGG 1 cut(s) 8
MwoI GCNNNNNNNGC 3 cut(s) 110, 329, 365
NheI GCTAGC 1 cut(s) 323
NlaIII CATG 1 cut(s) 288
NlaIV GGNNCC 1 cut(s) 154
PfeI GAWTC 1 cut(s) 273
PkrI GCNGC 3 cut(s) 95, 106, 181
Psp6I CCWGG 1 cut(s) 6
PspGI CCWGG 1 cut(s) 6
PspN4I GGNNCC 1 cut(s) 154
PstI CTGCAG 1 cut(s) 98
PvuII CAGCTG 1 cut(s) 107
RsaI GTAC 1 cut(s) 154
RsaNI GTAC 1 cut(s) 153
SatI GCNGC 3 cut(s) 94, 105, 180
ScrFI CCNGG 1 cut(s) 8
SetI ASST 6 cut(s) 95, 103, 109, 329, 413, 424
SfaNI GCATC 1 cut(s) 100
SfcI CTRYAG 1 cut(s) 94
Sse9I AATT 3 cut(s) 158, 203, 378
SspMI CTAG 2 cut(s) 80, 324
StyD4I CCNGG 1 cut(s) 6
TaaI ACNGT 3 cut(s) 31, 269, 307
TasI AATT 3 cut(s) 158, 203, 378
TfiI GAWTC 1 cut(s) 273
TscAI CASTG 3 cut(s) 36, 43, 274
TseI GCWGC 3 cut(s) 93, 104, 179
TspRI CASTG 3 cut(s) 36, 43, 274
XbaI TCTAGA 1 cut(s) 79
XcmI CCANNNNNNNNNTGG 1 cut(s) 164
XmiI GTMKAC 2 cut(s) 132, 225
XspI CTAG 2 cut(s) 80, 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.