Cytochrome p450
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G26710 |
| fragaria_vesca | FvH4_1g03910 |
| malus_domestica | MD02G1037300.v1.1 MD15G1177600.v1.1 |
| prunus_persica | Prupe.7G237900_v2.0.a1 |
| pyrus_communis | pycom02g03060 pycom15g15890 |
| rosa_chinensis | RchiOBHm_Chr2g0089381 |
| rosa_laevigata | RLG00000016022 |
| rosa_multiflora | Rmu_sc0000197.1_g000024 |
| rosa_roxburghii | Rroxscaffold_2G00152010 |
| rosa_rugosa | Rorug01G0490300 |
| rosa_samantha | Rh2AG045400 Rh2DG045300 |
| rosa_wichuraiana | Rw2G003730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 4 cut(s) | 345, 1184, 1331, 1345 |
| AciI | CCGC | 6 cut(s) | 343, 1086, 1172, 1331, 1345, 1393 |
| AclWI | GGATC | 8 cut(s) | 74, 134, 1096, 1138, 1183, 1225, 1249, 1584 |
| AcoI | YGGCCR | 1 cut(s) | 1266 |
| AcsI | RAATTY | 3 cut(s) | 368, 795, 838 |
| AcvI | CACGTG | 3 cut(s) | 1064, 1094, 1398 |
| AcyI | GRCGYC | 1 cut(s) | 933 |
| AfaI | GTAC | 2 cut(s) | 753, 1169 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 678, 1177, 1264, 1330, 1529 |
| AgsI | TTSAA | 5 cut(s) | 590, 722, 959, 1315, 1457 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 550 |
| AjiI | CACGTC | 2 cut(s) | 1014, 1303 |
| AjnI | CCWGG | 2 cut(s) | 14, 1263 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 353, 385 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 294, 326 |
| Alw21I | GWGCWC | 4 cut(s) | 702, 1077, 1218, 1537 |
| Alw26I | GTCTC | 3 cut(s) | 328, 754, 1559 |
| Alw44I | GTGCAC | 1 cut(s) | 1533 |
| AlwI | GGATC | 8 cut(s) | 74, 134, 1096, 1138, 1183, 1225, 1249, 1584 |
| Ama87I | CYCGRG | 1 cut(s) | 1217 |
| AoxI | GGCC | 8 cut(s) | 89, 192, 421, 714, 897, 1266, 1320, 1437 |
| ApaLI | GTGCAC | 1 cut(s) | 1533 |
| ApeKI | GCWGC | 5 cut(s) | 651, 987, 1051, 1054, 1349 |
| ApoI | RAATTY | 3 cut(s) | 368, 795, 838 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 294, 326, 1101, 1133, 1234, 1266 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 865, 1310 |
| AspLEI | GCGC | 1 cut(s) | 1345 |
| AspS9I | GGNCC | 8 cut(s) | 12, 90, 134, 302, 1242, 1321, 1438, 1504 |
| AsuC2I | CCSGG | 3 cut(s) | 738, 1319, 1324 |
| AsuHPI | GGTGA | 6 cut(s) | 310, 383, 446, 452, 587, 906 |
| AvaI | CYCGRG | 1 cut(s) | 1217 |
| AvaII | GGWCC | 5 cut(s) | 12, 134, 302, 1242, 1504 |
| BaeGI | GKGCMC | 1 cut(s) | 1537 |
| BanII | GRGCYC | 3 cut(s) | 454, 1218, 1392 |
| BauI | CACGAG | 1 cut(s) | 757 |
| BbrPI | CACGTG | 3 cut(s) | 1064, 1094, 1398 |
| BbsI | GAAGAC | 3 cut(s) | 627, 666, 721 |
| Bbv12I | GWGCWC | 4 cut(s) | 702, 1077, 1218, 1537 |
| BbvI | GCAGC | 5 cut(s) | 663, 999, 1041, 1063, 1361 |
| BccI | CCATC | 5 cut(s) | 264, 535, 928, 944, 1454 |
| BceAI | ACGGC | 3 cut(s) | 436, 679, 1253 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1384, 1418 |
| BciT130I | CCWGG | 2 cut(s) | 16, 1265 |
| BclI | TGATCA | 1 cut(s) | 186 |
| BcnI | CCSGG | 3 cut(s) | 738, 1319, 1324 |
| BcoDI | GTCTC | 3 cut(s) | 328, 754, 1559 |
| BfaI | CTAG | 1 cut(s) | 1415 |
| BfmI | CTRYAG | 1 cut(s) | 1055 |
| BisI | GCNGC | 5 cut(s) | 652, 988, 1052, 1055, 1350 |
| BlpI | GCTNAGC | 1 cut(s) | 690 |
| BlsI | GCNGC | 5 cut(s) | 653, 989, 1053, 1056, 1351 |
| Bme1390I | CCNGG | 5 cut(s) | 16, 738, 1265, 1319, 1324 |
| Bme18I | GGWCC | 5 cut(s) | 12, 134, 302, 1242, 1504 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 550 |
| BmeT110I | CYCGRG | 1 cut(s) | 1217 |
| BmgBI | CACGTC | 2 cut(s) | 1014, 1303 |
| BmgT120I | GGNCC | 8 cut(s) | 12, 90, 134, 302, 1242, 1321, 1438, 1504 |
| BmiI | GGNNCC | 2 cut(s) | 1243, 1391 |
| BmrFI | CCNGG | 5 cut(s) | 16, 738, 1265, 1319, 1324 |
| BmsI | GCATC | 4 cut(s) | 290, 1366, 1410, 1503 |
| BpiI | GAAGAC | 3 cut(s) | 627, 666, 721 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 98, 130 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1076 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 690 |
| BpuEI | CTTGAG | 5 cut(s) | 5, 100, 448, 482, 1112 |
| BpuMI | CCSGG | 3 cut(s) | 738, 1319, 1324 |
| Bsa29I | ATCGAT | 1 cut(s) | 822 |
| BsaAI | YACGTR | 3 cut(s) | 1064, 1094, 1398 |
| BsaBI | GATNNNNATC | 2 cut(s) | 185, 1259 |
| BsaHI | GRCGYC | 1 cut(s) | 933 |
| BsaJI | CCNNGG | 5 cut(s) | 711, 870, 900, 1068, 1237 |
| BsaWI | WCCGGW | 1 cut(s) | 1360 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 678, 1177, 1264, 1330, 1529 |
| Bse1I | ACTGG | 1 cut(s) | 266 |
| Bse3DI | GCAATG | 2 cut(s) | 564, 1041 |
| Bse8I | GATNNNNATC | 2 cut(s) | 185, 1259 |
| BseBI | CCWGG | 2 cut(s) | 16, 1265 |
| BseCI | ATCGAT | 1 cut(s) | 822 |
| BseDI | CCNNGG | 5 cut(s) | 711, 870, 900, 1068, 1237 |
| BseGI | GGATG | 5 cut(s) | 186, 920, 998, 1213, 1357 |
| BseJI | GATNNNNATC | 2 cut(s) | 185, 1259 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 678, 1177, 1264, 1330, 1529 |
| BseMI | GCAATG | 2 cut(s) | 564, 1041 |
| BseMII | CTCAG | 4 cut(s) | 53, 704, 1058, 1090 |
| BseNI | ACTGG | 1 cut(s) | 266 |
| BseRI | GAGGAG | 1 cut(s) | 119 |
| BseSI | GKGCMC | 1 cut(s) | 1537 |
| BseXI | GCAGC | 5 cut(s) | 663, 999, 1041, 1063, 1361 |
| Bsh1236I | CGCG | 4 cut(s) | 345, 1184, 1331, 1345 |
| Bsh1285I | CGRYCG | 3 cut(s) | 826, 1182, 1199 |
| BshFI | GGCC | 8 cut(s) | 91, 194, 423, 716, 899, 1268, 1322, 1439 |
| BshVI | ATCGAT | 1 cut(s) | 822 |
| BsiEI | CGRYCG | 3 cut(s) | 826, 1182, 1199 |
| BsiHKAI | GWGCWC | 4 cut(s) | 702, 1077, 1218, 1537 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1217 |
| BsiSI | CCGG | 4 cut(s) | 738, 1319, 1324, 1361 |
| BslFI | GGGAC | 3 cut(s) | 16, 1255, 1462 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 678, 1177, 1264, 1330, 1529 |
| BsmAI | GTCTC | 3 cut(s) | 328, 754, 1559 |
| BsmBI | CGTCTC | 3 cut(s) | 328, 754, 1559 |
| BsmFI | GGGAC | 3 cut(s) | 16, 1255, 1462 |
| BsnI | GGCC | 8 cut(s) | 91, 194, 423, 716, 899, 1268, 1322, 1439 |
| BsoBI | CYCGRG | 1 cut(s) | 1217 |
| Bsp1286I | GDGCHC | 6 cut(s) | 454, 702, 1077, 1218, 1392, 1537 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 690 |
| Bsp68I | TCGCGA | 1 cut(s) | 1184 |
| BspACI | CCGC | 6 cut(s) | 343, 1086, 1172, 1331, 1345, 1393 |
| BspANI | GGCC | 8 cut(s) | 91, 194, 423, 716, 899, 1268, 1322, 1439 |
| BspCNI | CTCAG | 4 cut(s) | 54, 703, 1057, 1089 |
| BspDI | ATCGAT | 1 cut(s) | 822 |
| BspFNI | CGCG | 4 cut(s) | 345, 1184, 1331, 1345 |
| BspHI | TCATGA | 2 cut(s) | 810, 1276 |
| BspLI | GGNNCC | 2 cut(s) | 1243, 1391 |
| BspMAI | CTGCAG | 1 cut(s) | 1059 |
| BspPI | GGATC | 8 cut(s) | 74, 134, 1096, 1138, 1183, 1225, 1249, 1584 |
| BspQI | GCTCTTC | 1 cut(s) | 707 |
| BsrDI | GCAATG | 2 cut(s) | 564, 1041 |
| BsrI | ACTGG | 1 cut(s) | 266 |
| BssECI | CCNNGG | 5 cut(s) | 711, 870, 900, 1068, 1237 |
| BssNI | GRCGYC | 1 cut(s) | 933 |
| BssSI | CACGAG | 1 cut(s) | 757 |
| BssT1I | CCWWGG | 1 cut(s) | 870 |
| Bst2BI | CACGAG | 1 cut(s) | 757 |
| Bst2UI | CCWGG | 2 cut(s) | 16, 1265 |
| Bst4CI | ACNGT | 8 cut(s) | 310, 322, 943, 1024, 1180, 1197, 1461, 1504 |
| Bst6I | CTCTTC | 3 cut(s) | 202, 707, 954 |
| BstACI | GRCGYC | 1 cut(s) | 933 |
| BstBAI | YACGTR | 3 cut(s) | 1064, 1094, 1398 |
| BstC8I | GCNNGC | 5 cut(s) | 985, 1059, 1347, 1428, 1494 |
| BstDEI | CTNAG | 5 cut(s) | 62, 690, 1044, 1076, 1160 |
| BstDSI | CCRYGG | 1 cut(s) | 1237 |
| BstF5I | GGATG | 5 cut(s) | 186, 920, 998, 1213, 1357 |
| BstFNI | CGCG | 4 cut(s) | 345, 1184, 1331, 1345 |
| BstHHI | GCGC | 1 cut(s) | 1345 |
| BstMAI | GTCTC | 3 cut(s) | 328, 754, 1559 |
| BstMCI | CGRYCG | 3 cut(s) | 826, 1182, 1199 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 429, 1132, 1328, 1349, 1436 |
| BstNI | CCWGG | 2 cut(s) | 16, 1265 |
| BstSCI | CCNGG | 5 cut(s) | 14, 736, 1263, 1317, 1322 |
| BstSFI | CTRYAG | 1 cut(s) | 1055 |
| BstSLI | GKGCMC | 1 cut(s) | 1537 |
| BstUI | CGCG | 4 cut(s) | 345, 1184, 1331, 1345 |
| BstV1I | GCAGC | 5 cut(s) | 663, 999, 1041, 1063, 1361 |
| BstV2I | GAAGAC | 3 cut(s) | 627, 666, 721 |
| BstX2I | RGATCY | 1 cut(s) | 1230 |
| BstYI | RGATCY | 1 cut(s) | 1230 |
| Bsu15I | ATCGAT | 1 cut(s) | 822 |
| BsuRI | GGCC | 8 cut(s) | 91, 194, 423, 716, 899, 1268, 1322, 1439 |
| BsuTUI | ATCGAT | 1 cut(s) | 822 |
| BtgI | CCRYGG | 1 cut(s) | 1237 |
| BtrI | CACGTC | 2 cut(s) | 1014, 1303 |
| BtsCI | GGATG | 5 cut(s) | 186, 920, 998, 1213, 1357 |
| BtsIMutI | CAGTG | 3 cut(s) | 259, 939, 1052 |
| BtuMI | TCGCGA | 1 cut(s) | 1184 |
| Cac8I | GCNNGC | 5 cut(s) | 985, 1059, 1347, 1428, 1494 |
| CciI | TCATGA | 2 cut(s) | 810, 1276 |
| CfoI | GCGC | 1 cut(s) | 1345 |
| Cfr13I | GGNCC | 8 cut(s) | 12, 90, 134, 302, 1242, 1321, 1438, 1504 |
| ClaI | ATCGAT | 1 cut(s) | 822 |
| CseI | GACGC | 3 cut(s) | 941, 1141, 1541 |
| Csp6I | GTAC | 2 cut(s) | 752, 1168 |
| CviAII | CATG | 5 cut(s) | 208, 517, 811, 1277, 1450 |
| CviQI | GTAC | 2 cut(s) | 752, 1168 |
| DdeI | CTNAG | 5 cut(s) | 62, 690, 1044, 1076, 1160 |
| DriI | GACNNNNNGTC | 1 cut(s) | 550 |
| EaeI | YGGCCR | 1 cut(s) | 1266 |
| Eam1104I | CTCTTC | 3 cut(s) | 202, 707, 954 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 550 |
| EarI | CTCTTC | 3 cut(s) | 202, 707, 954 |
| Ecl136II | GAGCTC | 1 cut(s) | 1216 |
| Eco130I | CCWWGG | 1 cut(s) | 870 |
| Eco147I | AGGCCT | 3 cut(s) | 194, 716, 899 |
| Eco24I | GRGCYC | 3 cut(s) | 454, 1218, 1392 |
| Eco47I | GGWCC | 5 cut(s) | 12, 134, 302, 1242, 1504 |
| Eco53kI | GAGCTC | 1 cut(s) | 1216 |
| Eco72I | CACGTG | 3 cut(s) | 1064, 1094, 1398 |
| Eco88I | CYCGRG | 1 cut(s) | 1217 |
| EcoICRI | GAGCTC | 1 cut(s) | 1216 |
| EcoO109I | RGGNCCY | 1 cut(s) | 134 |
| EcoRI | GAATTC | 1 cut(s) | 368 |
| EcoRII | CCWGG | 2 cut(s) | 14, 1263 |
| EcoT14I | CCWWGG | 1 cut(s) | 870 |
| EcoT38I | GRGCYC | 3 cut(s) | 454, 1218, 1392 |
| ErhI | CCWWGG | 1 cut(s) | 870 |
| Esp3I | CGTCTC | 3 cut(s) | 328, 754, 1559 |
| FaeI | CATG | 5 cut(s) | 211, 520, 814, 1280, 1453 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 959, 991 |
| FaqI | GGGAC | 3 cut(s) | 16, 1255, 1462 |
| FatI | CATG | 5 cut(s) | 207, 516, 810, 1276, 1449 |
| FauI | CCCGC | 2 cut(s) | 1179, 1338 |
| FauNDI | CATATG | 1 cut(s) | 486 |
| FbaI | TGATCA | 1 cut(s) | 186 |
| Fnu4HI | GCNGC | 5 cut(s) | 652, 988, 1052, 1055, 1350 |
| FokI | GGATG | 5 cut(s) | 193, 907, 985, 1220, 1344 |
| FriOI | GRGCYC | 3 cut(s) | 454, 1218, 1392 |
| Fsp4HI | GCNGC | 5 cut(s) | 652, 988, 1052, 1055, 1350 |
| FspBI | CTAG | 1 cut(s) | 1415 |
| GlaI | GCGC | 1 cut(s) | 1344 |
| GluI | GCNGC | 5 cut(s) | 652, 988, 1052, 1055, 1350 |
| HaeIII | GGCC | 8 cut(s) | 91, 194, 423, 716, 899, 1268, 1322, 1439 |
| HapII | CCGG | 4 cut(s) | 738, 1319, 1324, 1361 |
| HgaI | GACGC | 3 cut(s) | 941, 1141, 1541 |
| HhaI | GCGC | 1 cut(s) | 1345 |
| Hin1I | GRCGYC | 1 cut(s) | 933 |
| Hin1II | CATG | 5 cut(s) | 211, 520, 814, 1280, 1453 |
| Hin6I | GCGC | 1 cut(s) | 1343 |
| HinP1I | GCGC | 1 cut(s) | 1343 |
| HinfI | GANTC | 7 cut(s) | 240, 493, 569, 599, 892, 905, 1154 |
| HpaII | CCGG | 4 cut(s) | 738, 1319, 1324, 1361 |
| HphI | GGTGA | 6 cut(s) | 310, 383, 446, 452, 587, 906 |
| Hpy166II | GTNNAC | 4 cut(s) | 856, 946, 1017, 1535 |
| Hpy8I | GTNNAC | 4 cut(s) | 856, 946, 1017, 1535 |
| Hpy99I | CGWCG | 5 cut(s) | 422, 831, 1024, 1189, 1197 |
| HpyAV | CCTTC | 2 cut(s) | 222, 407 |
| HpyCH4III | ACNGT | 8 cut(s) | 310, 322, 943, 1024, 1180, 1197, 1461, 1504 |
| HpyCH4IV | ACGT | 5 cut(s) | 1013, 1063, 1093, 1302, 1397 |
| HpyCH4V | TGCA | 8 cut(s) | 281, 641, 966, 1039, 1057, 1401, 1426, 1535 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 429, 1132, 1328, 1349, 1436 |
| HpyF3I | CTNAG | 5 cut(s) | 62, 690, 1044, 1076, 1160 |
| HpySE526I | ACGT | 5 cut(s) | 1013, 1063, 1093, 1302, 1397 |
| Hsp92I | GRCGYC | 1 cut(s) | 933 |
| Hsp92II | CATG | 5 cut(s) | 211, 520, 814, 1280, 1453 |
| HspAI | GCGC | 1 cut(s) | 1343 |
| Ksp22I | TGATCA | 1 cut(s) | 186 |
| LguI | GCTCTTC | 1 cut(s) | 707 |
| LmnI | GCTCC | 4 cut(s) | 4, 106, 1213, 1395 |
| Lsp1109I | GCAGC | 5 cut(s) | 663, 999, 1041, 1063, 1361 |
| LweI | GCATC | 4 cut(s) | 290, 1366, 1410, 1503 |
| MaeI | CTAG | 1 cut(s) | 1415 |
| MaeII | ACGT | 5 cut(s) | 1013, 1063, 1093, 1302, 1397 |
| MaeIII | GTNAC | 3 cut(s) | 221, 501, 1094 |
| MflI | RGATCY | 1 cut(s) | 1230 |
| MhlI | GDGCHC | 6 cut(s) | 454, 702, 1077, 1218, 1392, 1537 |
| MluCI | AATT | 7 cut(s) | 99, 368, 782, 795, 838, 1003, 1433 |
| MlyI | GAGTC | 2 cut(s) | 249, 563 |
| MmeI | TCCRAC | 4 cut(s) | 345, 351, 591, 1216 |
| MroXI | GAANNNNTTC | 2 cut(s) | 865, 1310 |
| MseI | TTAA | 2 cut(s) | 435, 1470 |
| MslI | CAYNNNNRTG | 1 cut(s) | 941 |
| MspA1I | CMGCKG | 1 cut(s) | 1054 |
| MspI | CCGG | 4 cut(s) | 738, 1319, 1324, 1361 |
| MspR9I | CCNGG | 5 cut(s) | 16, 738, 1265, 1319, 1324 |
| MvaI | CCWGG | 2 cut(s) | 16, 1265 |
| MvnI | CGCG | 4 cut(s) | 345, 1184, 1331, 1345 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 429, 1132, 1328, 1349, 1436 |
| NciI | CCSGG | 3 cut(s) | 738, 1319, 1324 |
| NdeI | CATATG | 1 cut(s) | 486 |
| NlaIII | CATG | 5 cut(s) | 211, 520, 814, 1280, 1453 |
| NlaIV | GGNNCC | 2 cut(s) | 1243, 1391 |
| NmeAIII | GCCGAG | 2 cut(s) | 736, 1093 |
| NmuCI | GTSAC | 2 cut(s) | 221, 1094 |
| NruI | TCGCGA | 1 cut(s) | 1184 |
| PagI | TCATGA | 2 cut(s) | 810, 1276 |
| PceI | AGGCCT | 3 cut(s) | 194, 716, 899 |
| PciSI | GCTCTTC | 1 cut(s) | 707 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1184, 1335 |
| PdmI | GAANNNNTTC | 2 cut(s) | 865, 1310 |
| PfeI | GAWTC | 5 cut(s) | 493, 599, 892, 905, 1154 |
| PflFI | GACNNNGTC | 1 cut(s) | 1115 |
| PkrI | GCNGC | 5 cut(s) | 653, 989, 1053, 1056, 1351 |
| Ple19I | CGATCG | 1 cut(s) | 826 |
| PleI | GAGTC | 2 cut(s) | 248, 563 |
| PmaCI | CACGTG | 3 cut(s) | 1064, 1094, 1398 |
| PmlI | CACGTG | 3 cut(s) | 1064, 1094, 1398 |
| PpsI | GAGTC | 2 cut(s) | 248, 563 |
| Ppu21I | YACGTR | 3 cut(s) | 1064, 1094, 1398 |
| PpuMI | RGGWCCY | 1 cut(s) | 134 |
| Psp124BI | GAGCTC | 1 cut(s) | 1218 |
| Psp5II | RGGWCCY | 1 cut(s) | 134 |
| Psp6I | CCWGG | 2 cut(s) | 14, 1263 |
| PspCI | CACGTG | 3 cut(s) | 1064, 1094, 1398 |
| PspGI | CCWGG | 2 cut(s) | 14, 1263 |
| PspN4I | GGNNCC | 2 cut(s) | 1243, 1391 |
| PspPI | GGNCC | 8 cut(s) | 12, 90, 134, 302, 1242, 1321, 1438, 1504 |
| PspPPI | RGGWCCY | 1 cut(s) | 134 |
| PstI | CTGCAG | 1 cut(s) | 1059 |
| PsuI | RGATCY | 1 cut(s) | 1230 |
| PsyI | GACNNNGTC | 1 cut(s) | 1115 |
| PvuI | CGATCG | 1 cut(s) | 826 |
| PvuII | CAGCTG | 1 cut(s) | 1054 |
| RruI | TCGCGA | 1 cut(s) | 1184 |
| RsaI | GTAC | 2 cut(s) | 753, 1169 |
| RsaNI | GTAC | 2 cut(s) | 752, 1168 |
| RseI | CAYNNNNRTG | 1 cut(s) | 941 |
| SacI | GAGCTC | 1 cut(s) | 1218 |
| SapI | GCTCTTC | 1 cut(s) | 707 |
| SaqAI | TTAA | 2 cut(s) | 435, 1470 |
| SatI | GCNGC | 5 cut(s) | 652, 988, 1052, 1055, 1350 |
| Sau96I | GGNCC | 8 cut(s) | 12, 90, 134, 302, 1242, 1321, 1438, 1504 |
| SchI | GAGTC | 2 cut(s) | 249, 563 |
| ScrFI | CCNGG | 5 cut(s) | 16, 738, 1265, 1319, 1324 |
| SduI | GDGCHC | 6 cut(s) | 454, 702, 1077, 1218, 1392, 1537 |
| SfaNI | GCATC | 4 cut(s) | 290, 1366, 1410, 1503 |
| SfcI | CTRYAG | 1 cut(s) | 1055 |
| SinI | GGWCC | 5 cut(s) | 12, 134, 302, 1242, 1504 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 941 |
| SmlI | CTYRAG | 5 cut(s) | 20, 115, 427, 497, 1127 |
| SmoI | CTYRAG | 5 cut(s) | 20, 115, 427, 497, 1127 |
| Sse9I | AATT | 7 cut(s) | 99, 368, 782, 795, 838, 1003, 1433 |
| SseBI | AGGCCT | 3 cut(s) | 194, 716, 899 |
| SsiI | CCGC | 6 cut(s) | 343, 1086, 1172, 1331, 1345, 1393 |
| SspI | AATATT | 1 cut(s) | 229 |
| SspMI | CTAG | 1 cut(s) | 1415 |
| SstI | GAGCTC | 1 cut(s) | 1218 |
| StuI | AGGCCT | 3 cut(s) | 194, 716, 899 |
| StyD4I | CCNGG | 5 cut(s) | 14, 736, 1263, 1317, 1322 |
| StyI | CCWWGG | 1 cut(s) | 870 |
| TaaI | ACNGT | 8 cut(s) | 310, 322, 943, 1024, 1180, 1197, 1461, 1504 |
| TaiI | ACGT | 5 cut(s) | 1016, 1066, 1096, 1305, 1400 |
| TaqI | TCGA | 5 cut(s) | 411, 822, 826, 842, 1199 |
| TaqII | GACCGA | 1 cut(s) | 1259 |
| TasI | AATT | 7 cut(s) | 99, 368, 782, 795, 838, 1003, 1433 |
| TfiI | GAWTC | 5 cut(s) | 493, 599, 892, 905, 1154 |
| Tru1I | TTAA | 2 cut(s) | 435, 1470 |
| Tru9I | TTAA | 2 cut(s) | 435, 1470 |
| TscAI | CASTG | 3 cut(s) | 266, 946, 1052 |
| TseFI | GTSAC | 2 cut(s) | 221, 1094 |
| TseI | GCWGC | 5 cut(s) | 651, 987, 1051, 1054, 1349 |
| Tsp45I | GTSAC | 2 cut(s) | 221, 1094 |
| TspDTI | ATGAA | 8 cut(s) | 31, 142, 473, 721, 827, 1167, 1262, 1360 |
| TspGWI | ACGGA | 3 cut(s) | 844, 873, 1220 |
| TspRI | CASTG | 3 cut(s) | 266, 946, 1052 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1115 |
| VneI | GTGCAC | 1 cut(s) | 1533 |
| VpaK11BI | GGWCC | 5 cut(s) | 12, 134, 302, 1242, 1504 |
| XapI | RAATTY | 3 cut(s) | 368, 795, 838 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 877, 1360 |
| XmnI | GAANNNNTTC | 2 cut(s) | 865, 1310 |
| XspI | CTAG | 1 cut(s) | 1415 |