Rmu_sc0000227.1_g000013

Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000227.1
OG0007449
Physical Location & Seq
Reverse (-)
35847 .. 77524
41678 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 20538 bp
atggatgggagtttcagtctggattctgcactggagaggttactcgatcgttgcccaaagctccgatcgtttccgaaattcgattggctctcaaaaaagggagacaaagttactgaagacgaagtggtgcaagctctggttgaggtgtttgtgaatcctagttatactattcccctgacaggatgttttcgccctatagctgaggaggttgtggttaaaactgtggagttgcttcggctggtgcccaatttggggactaataccgacaagagaggtggaagttttggggaagatagagatttaagtgaagtgtatagtgttattgagttctacaatagagctgggaggggattggatctccatgagcatgcttgtttggccttctgtcgcgcccttgatttggctccttttttgttggggtctgtagaaagttatttcaaatttgctccacctccatttgagcgcattttgaagaggccaaaaacttctgatctctcttttgaggttggaactggtgtattgtatgcagtacggatttcttaccgcctccttttaacggaatataataaattttctgaagtttgggacttggcctgtttcttggaacttgttagccattatgcaaatcttgatctgcgctgcagtactccagatattgtggaggttatcacagacataagatggtgtggactgcagatagtgtcgcttattcttaagctcagcgataaagcaatttcaaatttgggtattggagatgaggatgcattttcatgtttattgaggtggaaagagttttgtcgggatgtctcgttggaggatgcgggcttgtatgttgatttattcaatggagaggaatcggagtcacagaatgagagcattgattaccatcagagaagctgtttgcagcctagtagccttaatacaatgcctattccttcatcacagtgttacggaattgagccacaaattaagcgacaaaggaatgagagatcagctgcaaatcctctgcccaatgatatatcaggtgcaaatccatttgtcttgacatcagctgtgaagaaaagttatgagatgatgctcttagctgtgagtcaaaggtggcccgttcttctttatggtcccaccggcagcgggaaatctgctctcatcagcaagttgtcccaggacagtggcaatcatgttttatcaattcacatggatgatcaaattgatggtagaacactcatcggtagttatgtctgtactgaaaaacctggcgaatttagatggcagcaggggtcacttacccaggctgtttctatggggtattgggttgtctttgaggatatagacaaagcaccatctgatgtgcattctatcttatcacccttactggatggtgcacgctcgtttggaacagggcatggacaggagattagggtggcagaaagttttcgacttttttcgacaatttcaacttcaaatcttgatgtatcttccatcgcagaaggtgggagttcactttctgctgtttggaggagagtgatggttgcaccttcaactattgatgacttgcaaacgatagtgaaagtgtgttatccaagtttagggtctctctctgtcaagctcacagaaacacttggaagtgtcaactctgtcatattacaccaaattggtggatatcaacccgggagctctgcttctgttagttacccaagtagattctcttcaagggatctcctcaaatggtgcaagcgcatagaagggctgaaattaagcttttatggagataatttggattgtgatgcgagagtacgcatctatgaggaggctgtggccatatttgctgctttctcaacatctacgaaaagtcgcttaactataatgaaagagatcggcaggttatgggaagtgccatcagattattcagagaccttgtatccttctaacaaacacaaactccaggaattactctcagaattaagagtttgcttccgtcaccctcagagcactttatgtggcaaaaggaagtcttttattgatttagataggtccatttgtttactcgagagactagcttcatcagtaaagtggaacgagcctgttctcctggttggggaaactgggactgggaagactacacttgttcaggacctggctgggaggcttgatcagaaactaacagttttgaacttaagtcagcaaagtgatgttactgacttattagggggatataaacccgtggatgaaagttctgtgtaccctctcttgtgtaaggagtttgagaatctattcaagaaatcatttcctgtggagaataacaataaatttcttatgcgtttacacgaggatctttacagaaaagattggaaaaaggtgagaaaaatcttaacaaaggctgttgatcacttccggaagtctgcgaaggaaagaatggagttggtaaaaaaggaaacaattgagtcagtcgaagagacaagatctgagtctcttaaaaagcggaaacgggtgaaacctcggactgatgaagaaatcaaggcatgggaaaactttaaattcaacctggagaatgttcatggaatgatattttcatttgtagaaggagcttttataactgcaatgaaaaatggtgagtgggttttgcttgatgaggtgaatttggcccctccggagaccttgcagaggattatgggtgttcttgaaggagagcacgggtcactctgcttagcagaaagaggggatattagttatatagaacgacaccctaacttccgggtatttgcctgtatgaatcctgctactgatgctggaaagcgggatttgcccttatctctaaggagcagatttacagagtactttgttgatgaggttttagatgataaagatctggaaagatttgttaaggagacttttggagacctaaaatcgaaagaggacttagtaaagaagattgtgtatttttataagactgcgaagaaactatctgaagaaaagctgcaggatggagctaatcagaaaccgcaatatagtttaaggtctctgtaccgtgctttaaaatatgcagaggaggctgaaagatattttggatttgaaaaagcaatatatgatgggttctgtatgttttttctcactttattggatagaagtagtgctgtagccatggaaaaagtgatcttagaaaatttgttggagaagaagactccgaagagagtatcatatgatcgttacttgtccaaatgctacaccattggagagaactctgatgagtttaaaaagaggtacattataactgcaagtgttgaggagcatctcaggaatttggctcgtgctatttggacaaaaaatcagaagtatcctgttctcttgcaggggcctacatccagtggcaaaactagccttgtgcggtatcttgctgcagtaacgaatcataattttgtacggataaataaccatgaacacacagatttgcaggaatatcttggttcctatgtagttgatacttctgggaacctcgtattccaggaaggtgcgttggtaaaagctgtacgaaatggtgattggattgttctagatgagcttaacttggctccatctgatgtgctggaagcattaaatcgattattggacgataacagggagctttttgtgcctgagctgcaagaaagtattcatgcacatcccaattttatgctttttgctacgcagaatccacctggtctttatggggggcgtaaaatgctttctcgggctttccgcaatcgttttgtagagatccatgtagatgaaattcctgattctgagttgagcacaatcttagagaggcggccacctggaatatctccaaatgtggcaaagaatatggttgctgtgatgaagaaattgcaagagaagaggcagacaagcaacgtttttgctgggaagcatgggtttattactccgcgtgatttgttccactgggctgatcgttacatagaacttgggggcaagccagaggatctggtccgagatggttattatcttctggcagagaggttgcgggatgaaggtgagaaatgtgttgttaaaaaagttctggaggcaaccttccgtgtgaaccttgctgacctttatagtcaggggcatgttcctgacttgcctaattgtcctgaactaccagagagtctcaagtatgtgctcagattttatgtagtgctagtgcttctgattgttttatcaatattagtgaaggagcctgtacttcttgttggtgaaacaggggctggaaagacaactgtctgtcagttactgagtattattttacgttcgaaattgcacattttgaactgtcatcagtactcagagacttctgattttcttggggggttttatcctattcgagatagatcaagactgatgtcagattttaaggaaggaattgaagaactaatgactgcagaagtgtcgaaacgcttccatctggaccgtattctttcttcagacataggtcaagcctcttcagtgttgtcgtatctagacaagatgttcagatattacgaaggcagttctgatgtcacaagtgaagatagaaggactttacaagagatgatggtgaagctctcgaagatgcaccaagagtggaaaaaactttttatgtggcaggatgggccccttgttcaggcaatgaggaagggtgatctctttctcgtggatgagatttcccttgctgatgatagtgtacttgaaaggttgaacagtgtattggagccagaaagaactctgtctttggccgagagaggaggtcctgatctggaggaaattgttgctcatgaaaggttctttttgcttgctacaatgaatcctggtggtgattttggcaagaaggaactgtctccagctcttcgtaaccggtttacagagatttgggtacctcctgtagataatatagctgagctcagaagtattgcattgaagaggttgtcctctccgaagctcgcgtgcatcctggatcctatgttgagtttttggaagtggttcaacgacctaaaactggggaggatgcttaccgtgagagatctgctgtcttgggttgactttatcaatgtaactgaaattacattagggcctcagtatgcatttcttcatggtgcattccttgttttgcttgatggtctcagtttagggagtgggatttctaaaagcaacgctgaggagctaagacagcaatgcctatcatatcttttagtgcagttaaagggcactgataaacatgtttaccctatgcaaaattttggttggggtgatcttgaaacagctagaggcgatttgtgcattgatagcatgcagtgcgacaacatttttggtgtctatccattctacatagaaaaagatcttcagtcttatacggttccttttgcattgcggtgtataggtgctgagaattgtgatgctgaaggttttgagattttggcaccaaccaccaggagaaatgcattgcgtgttctacgagctatgcagcttcctaaatctgttctattagaaggtagtccaggtgttgggaaaactagtttgatagttgccttgggaaaattttctggtcacaaagttgtaaggataaatttgtctgagcagactgatatgatggacttgttgggatcagatttaccagttgaaagtgacgaaggaatgaagtttgcctggtcagatggaatcttactgcaggttaaagcacctgaacttgaatctgaggtcttcataccagagttgggctgtacttttaagtgtccatcatcatttagaatatttgcttgtcaaaatccttctcatcaaggtggcggcagaaaaggccttccaaagtccttcctcaaccgtttcacaaaggtttatgtggaggagttggttgatgacgactatctttttatctgtagttcactttatccttcaatctgtacatctctgctttcaaaactgattttatttaataaacggatgtatgaagacaccatgttgcatcgcaagtttgctctggatggttctccctgggagtttaatctacgagatgtgattcgatcctgtcaaataataaaggattcaccatcaaagtccaaagattattgctttctggatgttgtctatgttcaaaggatgcgtacagagtcagaccggagaaaagtcctacagttgtatgagcagatttttgagatgaagccatatataaatcctcatccacgggttcagctcaattctcaatacttatatgttggaaatactgctgtaaggaggagttgtgcccagtcatctgcactccctagtaattcgcttcagattttgcctggaattcgtcagagcttggaagctgctgcatgttgtgtagagcatgaatggatgtgtatcctggtaggtccagcttcctctggtaagacctcattgatcaggttactggctcagctcactggaaatgtgctaaatgaattacatctgtcatcggggactgacatatctgaattgcttggatgctttgagcaatacaatgccttccgtaacttacgttcggttattactcgggtcaagttctgggtaaacgagttttgcagtttgcaattggagtcgtcaaacgaagcttttttatcaatcataaaagataattctacatccagatggtttgctttattatcgagcatggaccaggactctgtttcttgtttcacttctactcacgtggaagatagagagagattttcaagcattctcactctgttggttaagattatcaaacatttaaagctggtactggaggacaacaatttatctataagttggtcaagcaaagaactcgataaagtcatgaagacaattttcaagttgcaagaaggatatgagagacggccagggaagtttgaatgggtgacaggagtactaataaaggctgtagaacgaggggagtggattgtcctagagaatgcaaattgttgtaatccctcggtacttgacaggatcaactctttggtggaaccctccggatccattacacttaatgagtgtggggtcattgatggaaggccagttgttctgcagccgcattctaattttcgtgtgttcctgacagttaacccaaggtttggtgaagtctcccgagcaatgaggaacagaggagttgaaatatttgtgatgccaccatattggctaatgaatgagaacatgagaagtcgtggaagaattgaactaaacgatgtgaaaagattccttgttctatctggtataccctttactaaattggtctattcaatggccaaatcacatatatatgctaaagaggaaggattacgttttaatgtttgtatcacatatcttgagctttcacgctgggttcagttgtttcaacagcttctcaaaactggcagccaacctttgtggagcctacaaacaagttgggaacacatatatcttagttcatttggtgaggccattggtgaaaatgttattagtcatgtgaaatatacatatttatccatgaccgacttatgtgtatctggctcatcactgtctccatattggtgtttgcctggaggatttcccatgtctatgaagcccagggatcttgtgtggcactcaaaagagtcttctgtgatgactaactgcatgtacctagagtacctgggggccaagtatgcatcatataaattacatctagccaggaataggtgctccatttaccaggattcaattgcctgtggatttgcagtgtcttacttgatgggtatgaagattcataaggctcaatggtcaccgagggatctcctcaaatggtgcaagcgcatagaagggctgaaattaagcttttatggagataatttggattgtgatgcgagagtacgcatctatgaggaggctgtggccatatttgctgctttctcaacatctacgaaaagtcgcttaactataatgaaagagatcggcaggttatgggaagtgccatcagattattcagagaccttgtatccttctaacaaacacaaactccaggaattactctcagaattaagagtttacttccgtcaccctcagagcactttatgtggcaaaaggaagtcttttattgatttagataggtccatttgtttactcgagagactagcttcatcagtaaagtggaacgagcctgttctcctggttggggaaactgggactgggaagactacacttgttcaggacctggctgggaggcttgatcagaaactaacagttttgaacttaagtcagcaaagtgatgttactgacttattagggggatataaacccgtggatgaaagttctgtgtaccctctcttgtgtaaggagtttgagaatctattcaagaaatcatttcctgtggagaataacaataaatttcttatgcgtttacacgaggatctttacagaaaagattggaaaaaggtgagaaaaatcttaacaaaggctgttgatcacttccggaagtctgcgaaggaaagaatggagttggtaaaaaaggaaacaattgagtcagtcgaagagacaagatctgagtctcttaaaaagcggaaacgggtgaaacctcggactgatgaagaaatcaaggcatgggaaaactttaaattcaacctggagaatgttcatggaatgatattttcatttgtagaaggagcttttataactgcaatgaaaaatggtgagtgggttttgcttgatgaggtgaatttggcccctccggagaccttgcagaggattatgggtgttcttgaaggagagcacgggtcactctgcttagcagaaagaggggatattagttatatagaacgacaccctaacttccgggtatttgcctgtatgaatcctgctactgatgctggaaagcgggatttgcccttatctctaaggagcagatttacagagtactttgttgatgaggttttagatgataaagatctggaaagatttgttaaggagacttttggagacctaaaatcgaaagaggacttagtaaagaagattgtgtatttttataagactgcgaagaaactatctgaagaaaagctgcaggatggagctaatcagaaaccgcaatatagtttaaggtctctgtaccgtgctttaaaatatgcagaggaggctgaaagatattttggatttgaaaaagcaatatatgatgggttctgtatgttttttctcactttattggatagaagtagtgctgtagccatggaaaaagtgatcttagaaaatttgttggagaagaagactccgaagagagtatcatatgatcgttacttgtccaaatgctacaccattggagagaactctgatgagtttaaaaagaggtacattataactgcaagtgttgaggagcatctcaggaatttggctcgtgctatttggacaaaaaatcagaagtatcctgttctcttgcaggggcctacatccagtggcaaaactagccttgtgcggtatcttgctgcagtaacgaatcataattttgtacggataaataaccatgaacacacagatttgcaggaatatcttggttcctatgtagttgatacttctgggaacctcgtattccaggaaggtgcgttggtaaaagctgtacgaaatggtgattggattgttctagatgagcttaacttggctccatctgatgtgctggaagcattaaatcgattattggacgataacagggagctttttgtgcctgagctgcaagaaagtattcatgcacatcccaattttatgctttttgctacgcagaatccacctggtctttatggggggcgtaaaatgctttctcgggctttccgcaatcgttttgtagagatccatgtagatgaaattcctgattctgagttgagcacaatcttagagaggcggccacctggaatatctccaaatgtggcaaagaatatggttgctgtgatgaagaaattgcaagagaagaggcagacaagcaacgtttttgctgggaagcatgggtttattactccgcgtgatttgttccgctgggctgatcgttacatagaacttgggggcaagccagaggatctggtccgagatggttattatcttctggcggagaggttgcgggatgaaggtgagaaatgtgttgttaaaaaagttctggaggcaaccttccgtgtgaaccttgctgacctttatagtcaggggcatgttcctgacttgcctaattgtcctgaactaccagagagtctcaaagtgaaggagcctgtacttcttgttggtgaaacaggggctggaaagacaactgggttttatcctattcgagatagatcaagactgatgtcagattttaaggaaggaattgaagaactaatgactgcagaagtgtcgaaacgcttccatctggaccgtattctttcttcagacataggtcaagcctcttcagtgttgtcgtatctagacaagatgttcagatattacgaaggcagttctgatgtcacaagtgaagatagaaggactttacaagagatgatggtgaagctctcgaagatgcaccaagagtggaaaaaactttttatgtggcaggatgggccccttgttcaggcaatgaggaagggtgatctctttctcgtggatgagatttcccttgctgatgatagtgtacttgaaaggttgaacagtgtattggagccagaaagaactctgtctttggccgagagaggaggtcctgatctggaggaaattgttgctcatgaaaggttctttttgcttgctacaatgaatcctggtggtgattttggcaagaaggaactgtctccagctcttcgtaaccggtttacagagatttgggtacctcctgtagataatatagctgagctcagaagtattgcattgaagaggttgtcctctccgaagctcgcgtgcatcctggatcctatgttgagtttctggaagtggttcaacgacctaaaactggggaggatgcttaccgtgagagatctgctgtcttgggttgactttatcaatgtaactgaaattacattagggcctcagtatgcatttcttcatggtgcattccttgttttgcttgatggtctcagtttagggagtgggatttctaaaagcaacgctgaggagctaagacagcaatgcctatcatatcttttagtgcagttaaagggcactgataaacatgtttaccctatgcaaaattttggttggggtgatcttgaaacagctagaggcgatttgtgcattgatagcatgcagtgcgacaacatttttggtgtctatccattctacatagaaaaagatcttcagtcttatacggttccttttgcattgcggtgtataggtgctgagaattgtgatgctgaaggttttgagattttggcaccaaccaccaggagaaatgcattgcgtgttctacgagctatgcagcttcctaaatctggtagtccaggtgttgggaaaactagtttgatagttgccttgggaaaattttctggtcacaaagttgtaaggataaatttgtctgagcagactgatatgatggacttgttgggatcagatttaccagttgaaagtgacgaaggaatgaagtttgcctggtcagatggaatcttactgcaggctttgaaagaaggttcttgggttttgcttgatgaactcaatcttgcaccgcagtctgtattggagggtttgaatgctattctggatcatcgagctgaggtcttcataccagagttgggctgtacttttaagtgtccatcatcatttagaatatttgcttgtcaaaatccttctcatcaaggtggcggcagaaaaggccttccaaagtccttcctcaaccgtttcacaaaggtttatgtggaggagttggttgatgacgactatctttttatctgtagttcactttatccttcaatctgtacatctctgctttcaaaactgattttatttaataaacggatgtatgaagacaccatgttgcatcgcaagtttgctctggatggttctccctgggagtttaatctacgagatgtgattcgatcctgtcaaataataaaggattcaccatcaaagtccaaagattattgctttctggatgttgtctatgttcaaaggatgcgtacagagtcagaccggagaaaagtcctacagttgtatgagcagatttttgagatgaagccatatataaatcctcatccacgggttcagctcaattctcaatacttatatgttggaaatactgctgtaaggaggagttgtgcccagtcatctgcactccctagtaattcgcttcagattttgcctggaattcgtcagagcttggaagctgctgcatgttgtgtagagcatgaatggatgtgtatcctggtaggtccagcttcctctggtaagacctcattgatcaggttactggctcagctcactggaaatgtgctaaatgaattacatctgtcatcggggactgacatatctgaattgcttggatgctttgagcaatacaatgccttccgtaacttacgttcggttattactcgggtcaagttctgggtaaacgagttttgcagtttgcaattggagtcgtcaaacgaagcttttttatcaatcataaaagataattctacatccagatggtttactttattatcgagcatggaccaggactctgtttcttgtttcacttctactcacgtggaagatagagagagattttcaagcattctcactctgttggttaagattatcaaacatttaaagctggtactggaggacaacaatttatctataagttggtcaagcaaagaactcgataaagtcatgaagacaattttcaaattgcaagaaggatatgagagacggccagggaagtttgaatgggtgacaggagtactaataaaggctgtagaacgaggggagtggattgtcctagagaatgcaaattgttgtaatccctcggtacttgacaggatcaactctttggtggaaccctccggatccattacacttaatgagtgtggggtcattgatggaaggccagttgttctgcagccgcattctaattttcgtgtgttcctgacagttaacccaaggtttggtgaagtctcccgagcaatgaggaacagaggagttgaaatatttgtgatgccaccatattggctaatgaatgagaacatgagcagtcgtggaagaattgaactaaacgatgtgaaaagattccttgttctatctggtataccctttactaaattggtctattcaatggccaaatcacatatatatgctaaagaggaaggattacgttttaatgtttgtatcacatatcttgagctttcacgctgggttcagttgtttcaacagcttctcaaaactggcagccaacctttgtggagcctacaaacaagttgggaacacatatatcttagttcatttggtgaggccattggtgaaaatgttattagtcatgtgaaatatacatatttatccatgaccgacttatgtgtatctggctcatcactgtctccatattggtgtttgcctggaggatttcccatgtctatgaagcccagggatcttgtgtggcactcaaaagagtcttctgtgatgactaactgcatgtacctagagtacctgggggccaagtatgcatcatataaattacatctagccaggaataggtgctccatttaccaggattcaattgcctgtggatttgcagtgtcttacttgatgggtatgaagattcataaggctccccatcttaatacattaacccccagggagaatgctgaaattcacaaggcattggccagggttgagaaaaagctattgtttgctgccaactgggcttttgaacaagctactgaaagtgatctgaagctctatcttctgtcttttagctggtttcgttctcaattacagcccttctgtgacttctttgattctttggtgaagtcaattacactcaccatggagcataagatttggaaatatgtctcctgtcattaccatctgctgacatctcttttccaagtagagtttgaaaagaggctagtgccaatgctatcttttgaattatttgatgtgcccgaatcaaatgactccatcaagtttctccacaacgccatgtgctgtataatgccgctgaggcttagttatcaacagtggaattctgaggacagctacatgtgtgaaaaagctagctgttttaaaccagtgttaaaatctttgcggaagttggaggagcaatttatcaataagttccttgatttatctctcattgagtctccttctttcgatgcacttattgagatgtacactgaccttcttgaagatcacatgttattttgggatgctcttgagtcatctgaatttgaactctcactaatttcctggcatatattactaaagggtgcttcaaaattgaaggttttctgtccacaagcagtagatgacctactgaaggagagcaagaatctggaaaagatctcttcgtggcgatttcactcagagaagtctttgttgtgggttcatggtggtcaccctatattgccatgctctgctaaaatatttgaaaaacaactcctgatttcagaactttgcgagtcagtttggccaatgtccccaaaattattggcgcatgttaatgatcctattggctttgtttcgtcggatatgcgcttccgtgttctggaaggtgtttctatcacttcgtgcatcactggaaaatctgattctgtcgaggatgaagagcacctttttacgcagttggacgccatttatcagaagctcctacaaatgtttgaaaagcaaagaatcaaattgaaggagatttcatcatctaacaagcttttctctggatcaaatttatctagttgttgttcttattcaactgaggcattaggccacacatctgggtatgatacttggcgggacacttctcccctagttgacagtaccagtttttccctggatatgaagctacttctggagttatcacatgttcttttaactgatcccaaaagaatgcagcaagattttgccaaactatctggccatctgaagtatgcgttggatttctcattggacttctcatcaagaccacctcaggtgtttttgccacatcaaaagattttgtggatactggatgtgtggagttcagtggatgcagcaaatgtaaaaatggccagttttgtgctcgaactgtggttcaggtggcatcaatctttgtggatctattgccctctttcagttaagagcttctcagggactgatgattataatattccagtacctgatgtgctccttcagcctgtggtaacagcaacagtcttccagatagtgcaaagcagcatctctgctattaaggattatttcacgggttctctaaagcttagagtcgcatcatctaatctttggaatagctcacaccctggagcaaatttacctggtttcttactgtctgctgctcactctttgttccagcagattgtatatgcacatgagaaatcttttgatgctgatcactttgctgaaataaagtctgtatttgagaaaggaaacattcttgtggactctcttctttcaaagtcaagacacaatgggatgaaagagtcgatggaaaaatttatcgagcatgtgggatctcttatttcagaatcaagtcatcacgggctgaaagagtctgtggataagtttatcaagccactgctttataacctgtatctgccgcattgcttatctaaagattttcactttaatcatggttgtgcttggttgcggcttgggatattacgttttagactactgcttagctgtgatgatatggatcctgccatgaaatactattacaagcattcacagatagcagaaaagatttctgtgctgaaacttgaaattcaggtgcgacaaaaatgtgattgtttagctgggcatattggtaacagagattctgatgaaaaaagggtacagacattgaaaaagctagaagtggagcacaaaaagctgcagggaaagatcatcttccgctccgactttcggaaatttaaggggttaaaacatgaatgcgataaatttcttgaacgtgtcacctctgatgtgttttttcaacatgttacaaatgataagtccaccatgaattcacaacagcttcttgatcaaggctccaactggcagaaaatggcaactggttttattgaacaactgttatcagagaagtacatcgagtacagtgactttgttcaacccattctggttgcattatatgaaataaaattgggcttgtcactgattctttcaagtgtaatgcaaaaaagaatcctgaatagagttcagctgggcaatacagatatgattttgggatctatttattcatttatgaggttcccaatgttagcttcttccaagaccatttctgtcaacttaaacaccagttccggtgaatttccctcttttaagttggaaattcctacagtattcgatgctgaggatataggtcttctggagaaattgcttaccttttcaagcgatattgggtttaataatcgagtctctgttacacaactcaaagctgctctatatcaaaacattcttgtgcgtgttgcccattttgttaccaatgcaagactgatggattgtgaatcttttaagctcttggataagatatttagtgaatctgcaaagaattggatgagtacaaagattcacatgaaagccaaacaagactattcttcgcagcaatacaagtttagggctcgtgcatttaaacttgagagtataattgaacttgatatttcgtctctcgagaagtcgtttgctaatgaaagcttttcagagtggaaggattttcttgctgaagaggaggaagctttgaaggaacaagaaaactcagaggaagaattgaatcatatggaggatgctagtgtgaaagacgttgttgatattcacaatcagttatttgggacaagtaatcttgtcatagcgttagaggcgaacgcttctcccactgcttgggagcttacagtttcatgttctatttcactccctgatgtgggttcttttcacccttccctcacgccgggtcatcatctcatccatgattcggaaagagtgctttcattcactgcttcacatacactaggagtagagatgcttaaaggtttagggtgttcgtttcttgccagtttggaagccaaactggtgccagaaaatttgtttcgtatttgtttggagcatgagcaggtgttcaattcatcgcaccaatcatccttcagatacaatttttacaaggatccaaataccacaaagatgtatgaaatggtggaagcgcttatccctcttcagcagcgaatttattcccttttaaatgaatatgaagatcatccacagcttcagaaaatattggatataattgaaatgcttttgaatattccattgcgcacctccttggctaagactctctcaggattgcagtttctagttagatgcctcgattcattagaagatggctcaaaattctcttttgctgatcaagtgaagaagcccatttatgatcttctgtacgcatggagaaaattggaattggagtcatggccggcattgcttgacgaagtgcaggatcaatatgagattaatgctggaaagttgtggtttcctctttactcagttctacgaaagcgaacttctcctgatgctgctgcctacaaattgtctaccatccaaagtgtggaggacttcattcgcacatccagcattggcgaatttagaaaaagactacaacttcttttcgcgttccttggccatataaaaactggcgtatgcctggaagtttactcaagttattacgagaaggaaaatgaagagattttgtacaatgcatttggatattatgtgcaattcttaccaaaaattctcgcgcacatagaatctggtagaagtgttattgagaagaaactcaaagatcttctcaagccatatcactgggagcatcatgagagttctcaggagctcaggaacattattgagaagaaacgcgcagatcttctgtctgttgaaaagtccaaatcaacaaggcagaagctcaggaagattatacaggagtacacagttctgctggaacaacctgtgattgtcttccttgagcaagatgccgctaaaggaactgaaacttgttctcatcaaggtcagaattttgtcattgataatgtgaacaaaaaaattaagttgatggatgctgctttcgattggacagttatcaatgatgaagaaaggtgtatgtggtatactggttgggccaagaaagcggattctgccctgcgcaaattacagtgtgatacattaattgagtttggacattcagaatctgaaggtcttaataactcaggaatctgctcagaggttacaggagttcccaaccaatggagtgctgtgtgggacacacttcaaagaataattaggaaggcgatggattgttgtgagctgtggaaggatgcaaacaagagtcaaaagaaggggcggagtttctctgaccttctgaatcttttaaaaagcagtggtttatctagagatgtatttactgaggatgaagttaattcttggtggttcgttgagccatcattcgatgttcagcatttgctgctaacagagagtagactgccccatctttctgatgcagctcttccaggcaaccttcaatgttcttcccgtcagaatttggttacagaatggagaatggccaatgcatactatttcacaagtgtggaatctgttcttttcactcaccaacaggttggtgtgccagacccttatctgcaacaattcatcaaaatacaacaagatcaacaccaagctgctaataagtttgcagagaagttaaggagtttgaagcaatgcatttctacttttgaaaaatgcattgattttgatgatggaaatggtagcaagtgctctatcggtcaaaatcaacatgccacattgagttgtatgtggcagcagaagcaactgtttgatagtctgtatgctgtgacacatgatgaggttttgttgctaaggatatttgagaacacccatttaagcaaatgtcatattatgaagaatgaagcaaatgaatttcttgcttctgtcgagaagttaattccagagctccaaaagtctaaggaatccttggacaattaccttcttggcccagagagaacaattcagccttctcaatcctttattacttcaaagcagatggaaaaattagtgattcaaaattttgaggttataaggcagtttgaggcccatcttcttactttccaagcccaagatgtgaaatgctctgttaaagatattttgctccatcatcttctggaaatatttgagaaggtaaaattgttggaagttgtatttaattcagcgaaggacaagaaaaaggattcaatcagtgaacatgatatggacgattaccataaaacagatgctgcatatcagcaagcccttagaagtacatttgaacatattgttgaagcgatgcagaaattgggttcaccaagtaatggccaggttcatccggacaagtctttggggcaaattacctcctgggaaaaaatatttaacatatttgtcgaaaatctgagcttggatcaattatgtgataagcttctaagaacaatattttctgctgaaaaaatggtgaatcataggggtggtggatctagcagtccactcatccgagttgaagctgattttaagcagctgcgtctgtgtttggacatcttcttggattttggctatgctttgttaaaagaacttttggccatgcagaaaactgtgtctctaacgactcatatactcgcaagtcttttggctttatcttcaaatggccctgtgatatctcctgaggacaatggggatgatgctactcgtgatgtttctcaagaacaaaatggaacaggtatgggggagggtgttgggcggactgatgtcagcgatcagattacgaatgaagaccagttgattgtggcatcagaaaagcagcccagcgaggaaaaagatgccccaggtcaagccccaagtaaagatgataaagggattgagatggaggaagattttgaagctgagaaatttagtgtcagtgaggactccgaagacgatacaaatccaaatgatgatgaggatgatgaggatttagacactgaaattggaaagactggagaagatggtgcatcagttgacgagaaaggtgggaataaggatgaagatgaaaatcctaataatgcagatgacaagtatgatcctgggagttcagttgttgataaagatgcgagctctagggagcttagagcgaagggagattctgatgccactaaggaactgggagagcttgattctgatgaacttgacgaaccaaagggtgaaactggaagccaggatgaccctgtggagaatgtagatgacaagaacctggataaacaagcagatttggaccctacagaattaactcctgatgatcctgatggcatggatcaaaatcctgctgaagaaatggatttggatgatcctgaagtgcatgataaatatgatgagaatattacacatgaagatgaccatgaacagaccctacagaattaa

Protein Analysis

6845

Amino Acids

780.28

Weight (kDa)

5.86

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_5 PF07728 368 - 488 8.3e-14 AAA domain (dynein-related subfamily)
AAA_lid_7 PF17867 517 - 630 4.8e-09 Midasin AAA lid domain
AAA_5 PF07728 694 - 742 1.9e-06 AAA domain (dynein-related subfamily)
AAA_5 PF07728 855 - 942 3.3e-07 AAA domain (dynein-related subfamily)
AAA_lid_5 PF17865 955 - 1057 1.9e-30 Midasin AAA lid domain
AAA_5 PF07728 1112 - 1248 3.4e-24 AAA domain (dynein-related subfamily)
AAA_lid_7 PF17867 1260 - 1357 8.8e-12 Midasin AAA lid domain
AAA_5 PF07728 1524 - 1623 7.8e-14 AAA domain (dynein-related subfamily)
MDN1_4th PF21108 1638 - 1708 7.2e-06 Midasin AAA+ ATPase lid domain
AAA_lid_7 PF17867 1958 - 2053 4.1e-17 Midasin AAA lid domain
AAA_lid_7 PF17867 2575 - 2641 7.5e-06 Midasin AAA lid domain
AAA_5 PF07728 2705 - 2753 1.9e-06 AAA domain (dynein-related subfamily)
AAA_5 PF07728 2866 - 2953 3.3e-07 AAA domain (dynein-related subfamily)
AAA_lid_5 PF17865 2966 - 3068 1.9e-30 Midasin AAA lid domain
AAA_5 PF07728 3123 - 3259 3.4e-24 AAA domain (dynein-related subfamily)
AAA_lid_7 PF17867 3271 - 3368 4.4e-13 Midasin AAA lid domain
AAA_5 PF07728 3488 - 3587 8.1e-14 AAA domain (dynein-related subfamily)
MDN1_4th PF21108 3602 - 3672 7.2e-06 Midasin AAA+ ATPase lid domain
AAA_5 PF07728 3793 - 3927 2.4e-12 AAA domain (dynein-related subfamily)
AAA_3 PF07726 3793 - 3927 7.4e-08 ATPase family associated with various cellular activities (AAA)
AAA_lid_7 PF17867 3942 - 4037 4.1e-17 Midasin AAA lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

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Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 9 cut(s) 2591, 2943, 3266, 8624, 8976, 9299, 15210, 15645, 19193
AarI CACCTGC 1 cut(s) 17158
Acc16I TGCGCA 2 cut(s) 17366, 18245
Acc36I ACCTGC 4 cut(s) 1869, 5665, 7902, 17158
Acc65I GGTACC 2 cut(s) 4882, 10774
AccB1I GGYRCC 6 cut(s) 241, 4882, 5425, 10774, 11317, 17128
AccB7I CCANNNNNTGG 8 cut(s) 5510, 7073, 11390, 13025, 16938, 17653, 18345, 19463
AccBSI CCGCTC 1 cut(s) 15957
AccI GTMKAC 5 cut(s) 7213, 13165, 17639, 18209, 18577
AccII CGCG 8 cut(s) 390, 3919, 4952, 9952, 10844, 17717, 17843, 17961
AccIII TCCGGA 7 cut(s) 2391, 2647, 6971, 8424, 8680, 12923, 19477
AclI AACGTT 2 cut(s) 3885, 9918
AcvI CACGTG 2 cut(s) 6673, 12625
AcyI GRCGYC 1 cut(s) 14703
AdeI CACNNNGTG 1 cut(s) 14643
AfeI AGCGCT 1 cut(s) 17256
AflII CTTAAG 3 cut(s) 713, 2173, 8206
AflIII ACRYGT 7 cut(s) 5224, 11116, 14115, 14268, 14929, 16012, 16039
AgeI ACCGGT 2 cut(s) 4863, 10755
AhlI ACTAGT 2 cut(s) 5519, 11399
AleI CACNNNNGTG 1 cut(s) 18683
Alw44I GTGCAC 1 cut(s) 1380
AlwNI CAGNNNCTG 9 cut(s) 2134, 4238, 4264, 8167, 10217, 15200, 15224, 18290, 19388
Aor13HI TCCGGA 7 cut(s) 2391, 2647, 6971, 8424, 8680, 12923, 19477
Aor51HI AGCGCT 1 cut(s) 17256
ApaI GGGCCC 2 cut(s) 4626, 10518
ApaLI GTGCAC 1 cut(s) 1380
ArsI GACNNNNNNTTYG 6 cut(s) 5297, 5329, 11189, 11221, 16040, 16072
AseI ATTAAT 2 cut(s) 17559, 18266
AsiGI ACCGGT 2 cut(s) 4863, 10755
Asp718I GGTACC 2 cut(s) 4882, 10774
AsuC2I CCSGG 5 cut(s) 1668, 1669, 2753, 8786, 17007
AsuII TTCGAA 1 cut(s) 4283
AsuNHI GCTAGC 1 cut(s) 14129
AxyI CCTNAGG 2 cut(s) 15036, 19806
BaeGI GKGCMC 9 cut(s) 246, 1384, 4626, 5216, 6247, 10518, 11108, 12199, 14019
BamHI GGATCC 6 cut(s) 4963, 6974, 10855, 12926, 15757, 17218
BanI GGYRCC 6 cut(s) 241, 4882, 5425, 10774, 11317, 17128
BanII GRGCYC 9 cut(s) 1676, 4626, 4911, 10518, 10803, 16684, 17937, 19071, 20237
BarI GAAGNNNNNNTAC 6 cut(s) 1690, 1722, 4435, 4467, 10327, 10359
BauI CACGAG 8 cut(s) 2324, 3303, 4661, 8357, 9336, 10553, 16683, 19830
BbrPI CACGTG 2 cut(s) 6673, 12625
BbvCI CCTCAGC 6 cut(s) 201, 5163, 11055, 11652, 14075, 16413
BceAI ACGGC 2 cut(s) 6854, 12806
BcgI CGANNNNNNTGC 8 cut(s) 4401, 4435, 6769, 6803, 10293, 10327, 12721, 12755
BciVI GTATCC 7 cut(s) 1929, 3342, 6356, 7962, 9375, 12308, 15063
BcnI CCSGG 5 cut(s) 1668, 1669, 2753, 8786, 17007
BcuI ACTAGT 2 cut(s) 5519, 11399
BfoI RGCGCY 1 cut(s) 17258
BfrI CTTAAG 3 cut(s) 713, 2173, 8206
BfuAI ACCTGC 4 cut(s) 1869, 5665, 7902, 17158
BfuI GTATCC 7 cut(s) 1929, 3342, 6356, 7962, 9375, 12308, 15063
BglI GCCNNNNNGGC 2 cut(s) 13775, 14077
BlpI GCTNAGC 8 cut(s) 719, 2704, 4905, 6399, 8737, 10797, 12351, 15740
BmcAI AGTACT 6 cut(s) 646, 2834, 4313, 6870, 8867, 12822
BmtI GCTAGC 1 cut(s) 14133
BoxI GACNNNNGTC 6 cut(s) 4250, 4372, 4461, 10264, 10353, 19889
Bpu1102I GCTNAGC 8 cut(s) 719, 2704, 4905, 6399, 8737, 10797, 12351, 15740
Bpu14I TTCGAA 1 cut(s) 4283
BpuEI CTTGAG 9 cut(s) 4127, 7325, 13277, 14309, 16718, 17746, 17879, 18086, 19827
BpuMI CCSGG 5 cut(s) 1668, 1669, 2753, 8786, 17007
Bsa29I ATCGAT 2 cut(s) 3595, 9628
BsaAI YACGTR 2 cut(s) 6673, 12625
BsaHI GRCGYC 1 cut(s) 14703
Bse118I RCCGGY 4 cut(s) 1124, 4863, 10755, 17521
Bse21I CCTNAGG 2 cut(s) 15036, 19806
BseAI TCCGGA 7 cut(s) 2391, 2647, 6971, 8424, 8680, 12923, 19477
BseCI ATCGAT 2 cut(s) 3595, 9628
BseSI GKGCMC 9 cut(s) 246, 1384, 4626, 5216, 6247, 10518, 11108, 12199, 14019
BsgI GTGCAG 6 cut(s) 12, 5222, 6240, 11114, 12192, 17561
Bsh1236I CGCG 8 cut(s) 390, 3919, 4952, 9952, 10844, 17717, 17843, 17961
Bsh1285I CGRYCG 2 cut(s) 49, 68
BshNI GGYRCC 6 cut(s) 241, 4882, 5425, 10774, 11317, 17128
BshTI ACCGGT 2 cut(s) 4863, 10755
BshVI ATCGAT 2 cut(s) 3595, 9628
BsiEI CGRYCG 2 cut(s) 49, 68
BsmBI CGTCTC 3 cut(s) 6829, 12781, 16731
Bsp119I TTCGAA 1 cut(s) 4283
Bsp120I GGGCCC 2 cut(s) 4622, 10514
Bsp13I TCCGGA 7 cut(s) 2391, 2647, 6971, 8424, 8680, 12923, 19477
Bsp1407I TGTACA 4 cut(s) 5903, 11855, 14244, 17796
Bsp1720I GCTNAGC 8 cut(s) 719, 2704, 4905, 6399, 8737, 10797, 12351, 15740
Bsp19I CCATGG 3 cut(s) 3138, 9171, 13899
BspDI ATCGAT 2 cut(s) 3595, 9628
BspEI TCCGGA 7 cut(s) 2391, 2647, 6971, 8424, 8680, 12923, 19477
BspFNI CGCG 8 cut(s) 390, 3919, 4952, 9952, 10844, 17717, 17843, 17961
BspHI TCATGA 5 cut(s) 4783, 6798, 10675, 12750, 17917
BspMI ACCTGC 4 cut(s) 1869, 5665, 7902, 17158
BspOI GCTAGC 1 cut(s) 14133
BspQI GCTCTTC 4 cut(s) 4860, 10752, 14673, 18609
BspT104I TTCGAA 1 cut(s) 4283
BspT107I GGYRCC 6 cut(s) 241, 4882, 5425, 10774, 11317, 17128
BspTI CTTAAG 3 cut(s) 713, 2173, 8206
BsrBI CCGCTC 1 cut(s) 15957
BsrFI RCCGGY 4 cut(s) 1124, 4863, 10755, 17521
BsrGI TGTACA 4 cut(s) 5903, 11855, 14244, 17796
BssAI RCCGGY 4 cut(s) 1124, 4863, 10755, 17521
BssNAI GTATAC 3 cut(s) 7214, 13166, 18210
BssNI GRCGYC 1 cut(s) 14703
BssSI CACGAG 8 cut(s) 2324, 3303, 4661, 8357, 9336, 10553, 16683, 19830
Bst1107I GTATAC 3 cut(s) 7214, 13166, 18210
Bst2BI CACGAG 8 cut(s) 2324, 3303, 4661, 8357, 9336, 10553, 16683, 19830
BstACI GRCGYC 1 cut(s) 14703
BstAFI CTTAAG 3 cut(s) 713, 2173, 8206
BstAPI GCANNNNNTGC 3 cut(s) 5301, 11193, 18562
BstAUI TGTACA 4 cut(s) 5903, 11855, 14244, 17796
BstBAI YACGTR 2 cut(s) 6673, 12625
BstBI TTCGAA 1 cut(s) 4283
BstDSI CCRYGG 7 cut(s) 2220, 3138, 6182, 8253, 9171, 12134, 13899
BstEII GGTNACC 2 cut(s) 7737, 14468
BstENI CCTNNNNNAGG 5 cut(s) 2659, 4631, 8692, 10523, 14390
BstFNI CGCG 8 cut(s) 390, 3919, 4952, 9952, 10844, 17717, 17843, 17961
BstH2I RGCGCY 1 cut(s) 17258
BstMCI CGRYCG 2 cut(s) 49, 68
BstPAI GACNNNNGTC 6 cut(s) 4250, 4372, 4461, 10264, 10353, 19889
BstPI GGTNACC 2 cut(s) 7737, 14468
BstSLI GKGCMC 9 cut(s) 246, 1384, 4626, 5216, 6247, 10518, 11108, 12199, 14019
BstUI CGCG 8 cut(s) 390, 3919, 4952, 9952, 10844, 17717, 17843, 17961
BstXI CCANNNNNNTGG 7 cut(s) 1169, 1655, 7134, 13086, 14843, 17907, 18716
BstZ17I GTATAC 3 cut(s) 7214, 13166, 18210
Bsu15I ATCGAT 2 cut(s) 3595, 9628
Bsu36I CCTNAGG 2 cut(s) 15036, 19806
BsuI GTATCC 7 cut(s) 1929, 3342, 6356, 7962, 9375, 12308, 15063
BsuTUI ATCGAT 2 cut(s) 3595, 9628
BtgI CCRYGG 7 cut(s) 2220, 3138, 6182, 8253, 9171, 12134, 13899
BtgZI GCGATG 6 cut(s) 1465, 5951, 11903, 17166, 18404, 19451
BtsI GCAGTG 8 cut(s) 5306, 7701, 11198, 13653, 15635, 16932, 17049, 18484
BveI ACCTGC 4 cut(s) 1869, 5665, 7902, 17158
CaiI CAGNNNCTG 9 cut(s) 2134, 4238, 4264, 8167, 10217, 15200, 15224, 18290, 19388
CciI TCATGA 5 cut(s) 4783, 6798, 10675, 12750, 17917
Cfr10I RCCGGY 4 cut(s) 1124, 4863, 10755, 17521
Cfr9I CCCGGG 1 cut(s) 1667
ClaI ATCGAT 2 cut(s) 3595, 9628
CseI GACGC 2 cut(s) 14711, 19655
CsiI ACCWGGT 3 cut(s) 3691, 9724, 15376
CspAI ACCGGT 2 cut(s) 4863, 10755
CspCI CAANNNNNGTGG 8 cut(s) 256, 291, 7346, 7381, 13298, 13333, 15140, 15175
DraIII CACNNNGTG 1 cut(s) 14643
EciI GGCGGA 3 cut(s) 10052, 18457, 19897
Ecl136II GAGCTC 6 cut(s) 1674, 4909, 10801, 17935, 19069, 20235
Eco147I AGGCCT 2 cut(s) 5802, 11754
Eco24I GRGCYC 9 cut(s) 1676, 4626, 4911, 10518, 10803, 16684, 17937, 19071, 20237
Eco32I GATATC 2 cut(s) 1661, 19800
Eco47III AGCGCT 1 cut(s) 17256
Eco53kI GAGCTC 6 cut(s) 1674, 4909, 10801, 17935, 19069, 20235
Eco72I CACGTG 2 cut(s) 6673, 12625
Eco81I CCTNAGG 2 cut(s) 15036, 19806
Eco91I GGTNACC 2 cut(s) 7737, 14468
EcoICRI GAGCTC 6 cut(s) 1674, 4909, 10801, 17935, 19069, 20235
EcoNI CCTNNNNNAGG 5 cut(s) 2659, 4631, 8692, 10523, 14390
EcoO65I GGTNACC 2 cut(s) 7737, 14468
EcoRI GAATTC 4 cut(s) 6291, 12243, 14098, 16066
EcoRV GATATC 2 cut(s) 1661, 19800
EcoT38I GRGCYC 9 cut(s) 1676, 4626, 4911, 10518, 10803, 16684, 17937, 19071, 20237
Esp3I CGTCTC 3 cut(s) 6829, 12781, 16731
FauI CCCGC 7 cut(s) 814, 1124, 2787, 4008, 8820, 10041, 14853
FauNDI CATATG 3 cut(s) 3196, 9229, 16836
FblI GTMKAC 5 cut(s) 7213, 13165, 17639, 18209, 18577
FriOI GRGCYC 9 cut(s) 1676, 4626, 4911, 10518, 10803, 16684, 17937, 19071, 20237
FspI TGCGCA 2 cut(s) 17366, 18245
HaeII RGCGCY 1 cut(s) 17258
HgaI GACGC 2 cut(s) 14711, 19655
Hin1I GRCGYC 1 cut(s) 14703
HincII GTYRAC 8 cut(s) 1630, 5047, 7063, 10939, 13015, 14881, 16348, 20140
HindII GTYRAC 8 cut(s) 1630, 5047, 7063, 10939, 13015, 14881, 16348, 20140
HindIII AAGCTT 9 cut(s) 1756, 6573, 7789, 12525, 14777, 15320, 16753, 16794, 19565
HpaI GTTAAC 2 cut(s) 7063, 13015
Hpy99I CGWCG 1 cut(s) 14602
Hsp92I GRCGYC 1 cut(s) 14703
Kpn2I TCCGGA 7 cut(s) 2391, 2647, 6971, 8424, 8680, 12923, 19477
KpnI GGTACC 2 cut(s) 4886, 10778
KroI GCCGGC 1 cut(s) 17521
KroNI GCCGGC 1 cut(s) 17523
KspAI GTTAAC 2 cut(s) 7063, 13015
LguI GCTCTTC 4 cut(s) 4860, 10752, 14673, 18609
MabI ACCWGGT 3 cut(s) 3691, 9724, 15376
MbiI CCGCTC 1 cut(s) 15957
MfeI CAATTG 6 cut(s) 2436, 6554, 7677, 8469, 12506, 13629
MroI TCCGGA 7 cut(s) 2391, 2647, 6971, 8424, 8680, 12923, 19477
MroNI GCCGGC 1 cut(s) 17521
MspA1I CMGCKG 7 cut(s) 995, 1052, 1131, 9966, 14074, 16264, 19663
MspCI CTTAAG 3 cut(s) 713, 2173, 8206
MunI CAATTG 6 cut(s) 2436, 6554, 7677, 8469, 12506, 13629
MvnI CGCG 8 cut(s) 390, 3919, 4952, 9952, 10844, 17717, 17843, 17961
NaeI GCCGGC 1 cut(s) 17523
NciI CCSGG 5 cut(s) 1668, 1669, 2753, 8786, 17007
NcoI CCATGG 3 cut(s) 3138, 9171, 13899
NdeI CATATG 3 cut(s) 3196, 9229, 16836
NgoMIV GCCGGC 1 cut(s) 17521
NheI GCTAGC 1 cut(s) 14129
NmeAIII GCCGAG 2 cut(s) 4771, 10663
NsbI TGCGCA 2 cut(s) 17366, 18245
NspV TTCGAA 1 cut(s) 4283
OliI CACNNNNGTG 1 cut(s) 18683
PaeI GCATGC 3 cut(s) 371, 5299, 11191
PaeR7I CTCGAG 3 cut(s) 2045, 8078, 16730
PagI TCATGA 5 cut(s) 4783, 6798, 10675, 12750, 17917
PaqCI CACCTGC 1 cut(s) 17158
PasI CCCWGGG 5 cut(s) 5994, 7545, 11946, 13497, 13707
PceI AGGCCT 2 cut(s) 5802, 11754
PciI ACATGT 6 cut(s) 5224, 11116, 14115, 14268, 14929, 16039
PciSI GCTCTTC 4 cut(s) 4860, 10752, 14673, 18609
PdiI GCCGGC 1 cut(s) 17523
PflMI CCANNNNNTGG 8 cut(s) 5510, 7073, 11390, 13025, 16938, 17653, 18345, 19463
PfoI TCCNGGA 6 cut(s) 1941, 3498, 4959, 7974, 9531, 10851
PinAI ACCGGT 2 cut(s) 4863, 10755
Ple19I CGATCG 2 cut(s) 49, 68
PmaCI CACGTG 2 cut(s) 6673, 12625
PmlI CACGTG 2 cut(s) 6673, 12625
Ppu21I YACGTR 2 cut(s) 6673, 12625
PpuMI RGGWCCY 4 cut(s) 2131, 4757, 8164, 10649
PscI ACATGT 6 cut(s) 5224, 11116, 14115, 14268, 14929, 16039
PshAI GACNNNNGTC 6 cut(s) 4250, 4372, 4461, 10264, 10353, 19889
PshBI ATTAAT 2 cut(s) 17559, 18266
PsiI TTATAA 9 cut(s) 2591, 2943, 3266, 8624, 8976, 9299, 15210, 15645, 19193
Psp124BI GAGCTC 6 cut(s) 1676, 4911, 10803, 17937, 19071, 20237
Psp1406I AACGTT 2 cut(s) 3885, 9918
Psp5II RGGWCCY 4 cut(s) 2131, 4757, 8164, 10649
PspCI CACGTG 2 cut(s) 6673, 12625
PspEI GGTNACC 2 cut(s) 7737, 14468
PspOMI GGGCCC 2 cut(s) 4622, 10514
PspPPI RGGWCCY 4 cut(s) 2131, 4757, 8164, 10649
PsrI GAACNNNNNNTAC 5 cut(s) 6487, 6519, 12439, 12471, 20511
PstNI CAGNNNCTG 9 cut(s) 2134, 4238, 4264, 8167, 10217, 15200, 15224, 18290, 19388
PvuI CGATCG 2 cut(s) 49, 68
PvuII CAGCTG 4 cut(s) 995, 1052, 16264, 19663
SacI GAGCTC 6 cut(s) 1676, 4911, 10803, 17937, 19071, 20237
SapI GCTCTTC 4 cut(s) 4860, 10752, 14673, 18609
ScaI AGTACT 6 cut(s) 646, 2834, 4313, 6870, 8867, 12822
SexAI ACCWGGT 3 cut(s) 3691, 9724, 15376
Sfr274I CTCGAG 3 cut(s) 2045, 8078, 16730
SfuI TTCGAA 1 cut(s) 4283
SlaI CTCGAG 3 cut(s) 2045, 8078, 16730
SmaI CCCGGG 1 cut(s) 1669
SpeI ACTAGT 2 cut(s) 5519, 11399
SphI GCATGC 3 cut(s) 371, 5299, 11191
SseBI AGGCCT 2 cut(s) 5802, 11754
SstI GAGCTC 6 cut(s) 1676, 4911, 10803, 17937, 19071, 20237
StuI AGGCCT 2 cut(s) 5802, 11754
TaqII GACCGA 3 cut(s) 7484, 13436, 18869
TspMI CCCGGG 1 cut(s) 1667
Van91I CCANNNNNTGG 8 cut(s) 5510, 7073, 11390, 13025, 16938, 17653, 18345, 19463
Vha464I CTTAAG 3 cut(s) 713, 2173, 8206
VneI GTGCAC 1 cut(s) 1380
VspI ATTAAT 2 cut(s) 17559, 18266
XagI CCTNNNNNAGG 5 cut(s) 2659, 4631, 8692, 10523, 14390
XbaI TCTAGA 5 cut(s) 3547, 4489, 9580, 10381, 18488
XcmI CCANNNNNNNNNTGG 4 cut(s) 14896, 17650, 17735, 20278
XhoI CTCGAG 3 cut(s) 2045, 8078, 16730
XmaI CCCGGG 1 cut(s) 1667
XmiI GTMKAC 5 cut(s) 7213, 13165, 17639, 18209, 18577
ZrmI AGTACT 6 cut(s) 646, 2834, 4313, 6870, 8867, 12822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.