Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007449

Physical Location & Seq

Genomic Coordinates Reverse (-)

23101895 .. 23135694

Gene Structure 33800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00101100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 16446 bp

ATGGATGGGAGTTTCAGTCTGTATTCTGCACTAGAGAGGTTACTCGATCGTTGCCCCAAGCTCCGATCGTTTCCGAAATTCGATTGGCTCTCAAAAAAGGGAGACAAAGTTACTGAAGACCAAGTGGTGAAAGCGCTGGTTGAGGCGTTTGTGAATCCTAGTTATACTATTCCCCTGATAGGATGTTTTCGCCCTATAGCTGAGGAGGTTGTGGATAAGACTGTGGAGTTGCTTCGGCTGGTGCCCAATTTGGGGACTAATACCGACAAGAGAGGTGGAAGTTTTGGGGAAGATAGAGATTTAAGTGAAGTGTACAGTATTGTTGAGTTCTACAATCGAGCTGGGAGGGGATTGGATCTTCATGAGCATGCTTGTTTGGCCTTCTGTCGCGCCCTTGATTTGGCTCCTTTTTTGTTGGGGTCTGTAGAAAGTTATTTCAAATTTGCTCCACCTCCATTTGAGCGCATTTTGAAGAGGCCAAAAACTTCTGATCTCTCTTTTGAGGTTGGAACTGGTGTATTGTATGCAGTACGGATATCTTACCGCCTCCTTTTAACGGAATATAATAAATTTTCTGAAGTTTGGGACTTGGCCTGTTTCTTGGAACTTGTTAGCCATTATGCAAATCTTGATCTGCGCTGCAGTACTCCAGATATTGTGGAGGTTATTACAGACATAAGATGGTGTGGACTGCAGATAGTGTCGCTTATTCTTAAGCTCAGCAATAAAGCAATTTCAAATTTGGGTATTGGAGATGAGGATGCATTTTCATGTTTATTGAGGTGGAAAGAGTTTTGTCGGGATGTCTCGTTGGAGGATGCGGGCTTGTATGCTGATTTATTCAATGGAGAGGAATCGGAGTCACAGAATGAGAGCATTGATTACAATCAGAGAAGCTGTTTGCAGCCTAGTAGCCTTAATACAATGCCTATTCCTTCATCACAGTGTTACGGAATTGAGCCACATATTAAGCGACAAAGGAATGAGAGATCAGCTGCAAATCCTCTGCCCAATGATATATCAGGTGCAAATCCATTTGTCTTGACATCAGCTGTGAAGAAAAGTTATGAGATGATGCTCTTAGCTGCGAGTCAAAGGTGGCCCGTTCTTCTTTATGGTCCCACCGGCAGCGGGAAATCTGCTCTCATCAGCAAGTTGTCCCAGGACAGTGGCAATCAAGTTTTATCAATTCACATGGATGATCAAATTGATAGTAGAACACTCATTGGTAGTTATGTCTGTACTGAAAAACCTGGCGAATTTAGATGGCAGCCGGGGTCACTTACCCAGGCTGTTTCTATGGGGTATTGGGTTGTCTTTGAGGATATAGACAAAGCACCATCTGATGTGCATTCTATCTTATCACCCTTACTGGATGGTGCACGCTCGTTTGCAACAGGGCATGGACAGGAGATTAGGGTGGCAGAAAGTTTTCGACTTTTTTCGACAATTTCAACTTCAAATCTTGATGTATCTTCCATCGCAGAAGGTGGGAGTTCACTTTCTGCTGTTTGGAGGAGAGTGATGGTTGCACCTTCAACTATTGATGACTTGCAAACGATAGTGAAAGTGTGTTATCCAAGTTTAGGGTCTCTCTCTGTCAAGCTCACAGAAACACTTGGAAGTGTCAACTCTGTCATATTACACCAAATTGGTGGATATCAACCGGGGAACTCTGCTTCTGTTAGTTACCCAAGTAGATTCTCTTCAAGGGATCTCCTCAAATGGTGCAAGCGCATAGAAGGGCTGAAATTAAGCTTTTATGGAGATAATTTGGATTGTGATGCGAGAGTACGCATCTATGAGGAGGCTGTGGCCATATTTGCTGCTTTCTCAACATCTATGAAAAGTCGGTTAACTATAATGAAAGAGATCGCCAAGTTATGGGAAGTGCCATCAGATTATTCAGAGACCTTGTATCCTTCTAACAAACACAAACTCCAGGAATTACTCTCAGAATTAAGAGTTTGCTTCCGTCACCCTCAGAGCACTGTTAGTCCTGAGCTCTTCACCTTGTCTAAGTCCATTTGTTTACTCGAGCGACTAGCTTCATCAGTCAAGTGGAACGAGCCTGTTCTCCTGGTTGGTGAAACTGGGACTGGGAAGACTACACTTGTTCAGGACCTGGCTGGGAGGCTTGATCAGAAACTAACAGTTTTGAACTTAAGTCAGCAAAGTGATGTTACTGACTTATTAGGGGGATATAAACCTGTGGATGAAAGTTCTGTGTACCCTCTCTTGTGTAAGGAGTTTGAGAATCTATTCAAGAAATCATTTCCTGTGGAGAATAACGATAAATTTCTTACGCGTTTACACGAGGATCTTTACAGAAAAGATTGGAAAAAGGAAACAATTGAGTCAGTCGAAGAGACAAGATCTGAGTCTCTTAAAAAGCGGAAACGGGTGAAACCTCGGACTGATGAAGAAATCAAAGCATGGGAAAACTTTAAATTCAACCTGGAGAATGTTCATGGAATGATATTTTCATTTGTAGAAGGAGCTTTTATAACCGCAATGAAAAATGGTGAGTGGGTTTTGCTTGATGAGGTGAATTTGGCCCCTCCGGAGACCTTGCAGAGGATTATGGGTGTTCTTGAAGGTGAGCACGGGTCACTCTGCTTAGCAGAAAGAGGGGATATTAGTTATATAGAACGACACCCTAACTTCCGGGTATTTGCCTGTATGAATCCTGCTACTGATGCTGGAAAGCGGGATTTGCCCTTATCTCTAAGGAGCAGATTTACAGAGTACTTTGTTGATGAGGTTTTAGATGATAAGGATCTCGAAAGATTTGTTAAGGAGACTTTTGGAGACCTAAAATCGAAAGAGGATTTAGTAAAGAAGATTGTGTATTTTTATAAGACAGCGAAGAAACTATCTGAAGAAAAGCTGCAGGATGGAGCTAATCAGAAACCGCAATATAGTTTAAGGTCTCTGTACCGTGCTTTAAAATATGCAGAGGAGGCAGAAAGATATTTTGGATTTGAAAAAGCAATATATGATGGGTTCTGTATGTTTTTTCTCACTTTATTGGATAAAAGTAGTGCTGTAGCCATGGAAAAAGTGATCTTAGAAAATTTGTTGGAGAAGAAGACTCCGAAGAGAGTATCATATGATCGTTACTTGTCCAAATGCTACACCATTGGAGAGAACTCTGATGAGTTTAAAAAGAGGTACATTATAACTGCAAGTGTTGAGGAGCATCTCAGGAATTTGGCTCGTGCTATTTGGACAAAAAATCAGAAGTATCCTGTTCTCTTGCAGGGGCCTACATCCAGTGGCAAAACTAGCCTTGTGCGGTATCTTGCTGCAGTAACGAATCATAATTTTGTACGCATAAATAACCATGAACACACAGATTTGCAGGAATATCTTGGTTCCTATGTAGTTGATATTTCTGGGAACCTCGTATTCCAGGAAGGTGTGTTGGTAAAAGCTGTACGAAATGGCGATTGGATTGTTCTAGATGAGCTTAACTTGGCTCCATCCGATGTGCTGGAAGCATTAAATCGATTATTGGACGATAACAGGGAGCTCTTTGTGCCTGAGCTGCAAGAAAGTATTCATGCACATCCCAATTTTATGCTTTTTGCTACGCAGAATCCACCTGGTCTTTATGGTGGGCGTAAAATGCTTTCTCGGGCTTTCCGCAATCGTTTTGTAGAGATCCATGTAGATGAAATTCCTGATTCTGAGTTGAGCACAATCTTAGAGAGGCGGCCGCCTGGAATATCTCCAAATGTGGCAAAGAATATGGTTGCTGTGATGAAGAAATTGCAAGAGAAGAGGCAGACAAGCAACGTTTTTGCTGGGAAGCATGGGTTTATTACTCCGCGTGATTTGTTCCGCTGGGCTGATCGTTACATAGAACTTGGGGCCAAGCGAGAGGATCTGGTCCGAGACGGTTATTATCTTCTGGCAGAGAGGTTGCGGGATGAAGGCGAGAAATGTGTTGTTAAAGAAGTTCTGGAGGCAACCTTCCGTGTGAACCTTGCTGACCTTTATAGTCAGGGGCATGTTCCTGACTTGCCTAATTGTCCTGAACTACCAGAGAGTCTCAATGTTAGTTGGACGAATAGTATGCAGAGATTGTACTTTCTTGTGGACCGTTGCAATAGAGTGAAGGAGCCTGTACTTCTTGTTGGTGAAACAGGGGCTGGAAAGACAACTGTCTGTCAGTTACTGAGTATTATTTTACGTTCGAAACTGCACATTTTGAACTGTCATCAGTACTCAGAGACTTCTGATTTTCTTGGGGGGTTTTATCCTATTCGAGATAGATCAAGACTGATGTCAGATTTTAAGGAAGGAATTGAAGAACTAATGACTGCAGAAGTGTCTAAACGCTTCCATCTGGACTGTATTCTTTCTTCAGACATAGGTCAAGCCTCTTCAGTGTTGTCGTATCTAGACAAGATGTTCAGATATTACGAAGGCAGTTCTGATGTCACAAGTGAAGATAGAAGGACTTTACAAGAGATGATGGTGAAGCTCTCGAAGATGCACCAAGAGTGGAAAAAACTTTTTATGTGGCAGGATGGGCCCCTTGTTCAGGCAATGAGGAAGGGTGATCTCTTTCTCGTGGATGAGATTTCCCTTGCTGATGATAGTGTACTTGAAAGGTTGAACAGTGTATTGGAGCCAGAAAGAACTCTGTCTTTGGCCGAGAGAGGAGGTCCTGATCTGGAGGAAATTGTTGCTCATGAAAGGTTCTTTTTGCTTGCTACAATGAATCCTGGTGGTGATTTTGGCAAGAAGGAACTGTCTCCAGCTCTTCGTAACCGGTTTACAGAGATTTGGGTACCTCCTGTAGATGATATAGCTGAGCTCAGAAGTATTGCATTGAAGAGGTTGTCCTCTCTGAAGCTCGCGTGCATCCTGGATCCTATGTTGAGTTTTTGGAAGTGGTTCAACGACCTAAAACAGGGGAGGATGCTTACCGTGAGAGATCTGCTGTCTTGGGTTGACTTTATCAATGTAACTGAAATCACATTAGGGCCTCAGTATGCATTTCTTCATGGTGCATTCCTTGTTTTGCTTGATGGTCTCAGTTTAGGGAGTGGGATTTCTAAAAGCAACGCTGAGGAGCTAAGACAGCAGTGCCTATCATATCTTTTAGTGCAGTTAAAGGGCATTGATAAACATGTTTACCCGATGCAAAATTTTGGTTGGGGTGATCTTGAAACAGCTAGAAGCGATTTGTGCATTGATAGCATGCAGTGCGACAACATTTTTGGTGTCTATCCATTCTACATAGAAAAAGGTGCGGAGAATTGTGATGCTGAAGGTTTTGAGATTTTGGCACCAACCACCAGGAGAAATGCATTGCGTGTTCTACGAGCTATGCAGCTTCCTAAACCTGTTCTATTAGAAGGTAGTCCAGGTGTTGGGAAAACTAGTTTGATAGTTGCCTTGGGAAAATTTTCTGGTCACAAAGTTGTAAGGATAAATTTGTCTGAGCAGACTGATATGATGGACTTGTTGGGATCAGATTTACCAGTTGAAAGTGACGAAGGAATGAAGTTTGCCTGGTCAGATGGAATCTTACTGCAGGCTTTGAAAGAAGGTTCTTGGGTTTTGCTTGATGAACTCAATCTTGCACCGCAGTCTGGTTTGAATGCTATTCTGGATCATCGAGCTGAGGTCTTCATACCAGAGTTGGGCTGTACTTTTAAGTGTCCATCATCATTTAGAATATTTGCTTGTCAAAATCCTTCTCATCAAGGCGGTGGCAGAAAAGGCCTTCCAAAGTCCTTCCTCAACCGTTTCACAAAGGTTTATGTGGAGGAGTTGGTTGATGATGACTATCTTTTTATCTGTAGTTCACTTTATCCTTCAATCTGTACATCTCTGCTTTCAAAACTGATTTTATTTAATAAACGGATGTATGAAGACACCATGTTGCATCGCAAGTTTGCTCTGGATGGTTCTCCCTGGGAGTTTAATCTACGAGATGTGATTCGATCCTGTCGAATAATAAAGGATTCACCATCAAAGTCCAAAGATTATTGCTTTCTGGATGTTGTCTATGTTCAAAGGATGCGTACAGAGTCAGACCGGAGAAAAGTCCTACAGTTGTACGAGCAGATTTTTGAGATGAAGCCATATATAAATCCTCATCCACGGGTTCAGCTCAATTCTCAATACTTATATGTTGGAAATACTGCTGTAAGGAGGAGTTGTGCCCAGTCATCTGCACTCCCTAGTAATTCGCTTCAGATATTGCCTGGAATTCGTCAGAGCTTGGAAGCTGCTGCATGTTGTGTAGAGCATGAATGGATGTGTATCCTGGTAGGTCCAGCTTCCTCCGGTAAGACCTCATTGATCAGGTTACTGGCTCAGCTCACTGGAAATGTGCTAAATGAATTACATCTGTCATCTGGGACTGACATATCTGAATTGCTTGGATGCTTTGAGCAATACAATGCCTTCCGTAACTTACGTTCGGTTATTACTCGGGTCAAGTTCTGGGTAAACGAGTTTTGCAGTTTGCAATTGGAGTCGTCAAACGAAGCTTTTTTATCAATCATAAAAGATAATTCTATATCCAGATGGTTTGCTTTATTATCGAGCATGGACCAGGACTCTGTTTCTTGTTTCACTTCTACTCACGTGGAGGATAGAGAGAGATTTTCAAGCATTCTCACTCTGTTGGTTAAGATTATCAAACATTTAAAGCTGGTACTGGAGGACAACAACTTATCTATAAGTTGGTCAAGCAAAGAACTCGATAAAGTCATGAAGACAATTTTCAAGTTGCAAGAAGGATATGAGAGACGGCCAGGGAAGTTTGAATGGGTGACAGGAGTACTAATAAAGGCTGTAGAACGAGGGGAGTGGATTGTCCTAGAGAATGCAAATTGTTGTAATCCCTCGGTACTTGATAGGATCAACTCTTTGGTGGAACCCTCCGGATCCATTACACTTAATGAGTGCGGGGTCATTGATGGAAGGCCAGTTGTTCTGCAGCCGCATTCTAATTTTCGTGTGTTCCTGACAGTTAACCCAAGGTTTGGTGAAGTCTCCCGAGCAATGAGGAACAGAGGAGTTGAAATATTTGTGATGCCACCATATTGGCTAATGAATGAGAACATGAGAAGTCGTGGAAGAATTGAACTAAACGATGTGAAAAGATTCCTTGTCCTATCTGGTATACCCTTTGCTAAATTGGTCTATTCAATGGCCAAATCACATATATATGCTAAAGAGGAAGGATTACGTTTTAATGTTTGTATCACATATCTTGAGCTTTCACGCTGGGTTCAGTTGTTTCAACAACTTCTCAAAACTGGCAGCCAACCTTTGTGGAGCCTACAAACAAGTTGGGAACACATATATCTTAGTTCATTTGGTGAGGCCATTGGTGAAAATGTTATTAGTCATGTGAAATATACATATTTATCCATGACCGACTTATGTGTATCTGGCTCATCACTGTCTCCATATTTGTGTTTGCCTGGAGGATTTCCCATGTCTATGAAGCCCAGGGATCTTGTGTGGCACTCAAAAGAGTCTTCTGTGATGACTAACTGCATGTACCTAGAGTACCTGGGGGCTAAGTATGCATCATATAAATTACATCTAGCCAGGAATAGGTGCTCTATTTACCAGGATTCAATTGCCTGTGGATTTGCAGTGTCTTACTTGATGGATATGAAGATTTGTAAGGCTCCCCATCTTAATACATTAACCCCCAGGGATAATGCCGAAATTCACAAGGCATTGGCCAGGGTTGAGAAAAAGCTATTGTTTGCTGCCAACTGGGCATTTGAACAAGCTACTGAAAGTGATCTGAAGCTCTATCTTCTGTCTTTTAGCTGGTTTCGTTCTCAATTACAGCCCTTCTGTGACTTCTTTGATTCTTTGGTGAAGTCAATTACACTCACCATGGAGCATAAGATTTGGAAATATGTCTCCTGTCATTACCATCTGCTGACATCTCTTTTCCAAGTAGAGTTTGAAAAGAGGCTAGTGCCAATGCTATCTTTTGAATTATTTGATGTGCCCGAATCAAATGACTCCATCAAGTTTCTCCACAACGCCATATGCTGTATAATGCCGCTGAGGCTTAGTTATCAACAGTGGAATTCTGAGGACAGCTACATGTGTGAAAAAGCTAGCTGTTTTAAACAAGTGTTAAAATCTTTGCGGAAGTTGGAGGAGCAATTTATCAATAAGTTCCTTGATTTATCTCTCATTGAGTCTCCTTCTTTCGATGCACTTATGGAGATGTACACTGACCTTCTTGAAGATCACATGTTATTTTGGGATGCTCTCGAGTCATCTGAATTTGAACTCTCACTAATTTCCTGGCATATATTACTAAAGGGTGCTTCAAAATTGAAGGTTTTCTGTCCACAAGCAGTAGATGATCTACTGAAGGAGAGCAAGAATCTGGAAAAGATCTCTTCGTGGCGATTTCACTCAGAGAAGTCTTTGTTGTGGGTTCATGGTGGTCACCCTATATTGCCATGCTCTGCTAAAATATTTGAAAAACAACTCCTGATTTCAGAACTTTGCGAGTCAGTTTGGCCAATGTCCCCAAAATTATTGGCGCATGTTAATGATCCTATTGGCTTTGTTTCGTCGGATATGCGCTTCCGTGTTCTGGAAGGTGTTTCTATCACTTCGTGCATCACTGGAAAATCTGATTCTGTCGAGGATGAAGAGCACCTTTTTACGCAGTTGGACGCCATTTATCAGAAGCTCCTACAAATGTTTGAAAAGCAAAGAATCAAATTGAAGGAGATTTCATCATCTAACAAGCTTTTCTCTGGATCAAATTTATCTAGTTGTTGTTCTTATTCAACTGAGGCATTAGGCCACACATCTGGGTATGATACTTGGCGGGACACTTCTCCCCTAGTTGACAGTACCAGTTTTGACCTGGATATGAAGCTACTTTTGGAGTTATCACATGTTCTTTTAACTGATCCCAAAAGAATGCAGCAAGATTTAGCCAAACTATCTGGCCATCTGAAGTATGTGTTGGATTTCTCATTGGACTTCTCATCAAGACCACCTCAAGTGTTTTTGCCACATCAAAAGATTTTGTGGATACTGGATGTGTGGAGTTCAGTGGATGCAGCAAATGTAAAAATGGCCAGTTTTGTGCTCGAACTGTGGTTCAGGTGGCATCAATCTTTGTGGACCTATTGCCCTCTTTCAGTTAAGAGCTTCTCAGGGACTGATGACTGTAATATTCCAGTACCTGATGTGCTCCTTCAGCCTGTGGTAACAGCAACAGTCTTCCAGATAGTGCAAAGCAGCACCTCTGCTATTAAGGATTATTTCACGGGTTCTCTAAAGCTTAGAGTCGCATCATCTAATCTTTGGAATAGCTCACACCCTGGAGCAAATTTACCTGGTTTCTTACTGTCTGCTGCTCACTCTTTGTTCCAGCAGATTGTATATGCACATGAGAAATCTTTTGATGCTTATCACTTTGCTGAAATAAAGTCTGTATTTGAGAAAGGAAACATTTTTGTGGAGTCTCTTCTTTCAAAGTCAAGACACAATGGGATGAAAGAGTCGATGGAAAAATTTATCGAGCATGTGGGATCTCTTATTTCAGAATCAAGTCATCACGGGCTGAAAGAGTCTGTGGATAAGTTTATCAAGCCACTGCTTTATAACCTGTATCCGCCGCATTGCTTATCTAAAGATTTTCACTTTAATCATGGTTGTGCTTGGTTGCGGCTTGGGATATTACGTTTTAGACTACTGCTTAGCTGTGATGATATGGATCCTGCCATGAAATACTATTTCAAGCATTCACAGATAGCAGAAAAGATCTCTTTGCTGAAACTTGAAATTCAGGTGCGACAAAAATGTGATCATTTAGCTGGGCATATTGGTAACAGAGATTCTGATGAAAAAAGGGTACAGACATTGAAAAAGCTTGAAGTGGAGCACAGAAAGCTGCAGAGAAAGATCATCTTCCGCTGCGACTTTCGGAAATTTAAGGGGTTAAAACATGAATGCGATAAATTTCTTGAACGTGTCACCTCTGATGTGTTTTTTCAACATGTTACAAATGATAAGTCCGCCATGAATTCACAACAGCTTCTTGATCAAGGCTCCAACTGGCAGAAAATGGCAACTGGTTTTATTGAACAACTGTTATCAGAGAAGTACATCGAGTACAGTGACTTTGTTCAACCCATTCTGGTTGCATTATATGAAATGAAATTGGGCTTGTCACTGATTCTTTCAAGTGTAATGCAAAAAAGAATCCTGAATAGAGTTCAGCTGGACAATACAGATATGATTTTGGGATCTATTTATTCATTTATGAGGTTCCCAAGGTTAGCTTCTTCCAAGACCATTTCTGTCAACTTAAACACCGGTTCCAGTGAATTTCCCTCTTTTAAGTTGGAAATTCCTACAGTATTTGATGCTGAGGATATAGGTCTTCTGGAGAAATTGCTTACCTTTTCAAGCGATATTGGGTTTAATAATCAAGTCTCTGTTACACAACTCAAAGCTGCTCTATATCAAAACATTCTTGTGCGTGTTGCCCATTTTGTTACCAATGCAAGACTGATGGATTATGAATCTTTCAAGCTCTTGGATAAGATATTTAGTGAATCTGCAAAGAATTGGATGAGTACAAAGATTCACATGAAAGCCAAACAAGACTATTCTTCGCAGCAATACAAGTTTAGGGCTCGTGCATTTAAACTTGAGAGTATAATTGAACTTGATATTTCGTCTCTCGAGAAGTCGTTTGCCAATGAAAGCTTTTCAGAATGGAAGGATTTTCTTGCTGAAGAGGAGGAAGCTTTGAAGGAACAAGAAAACTTAGAGGAAGAATTGAATCATATGGAGGATGCTAGTGTGAAAGACGTAGTTGATATTCACAATCAGTTATTTGGGACAAGTAATCTTGTCATAGCGGGACTGGCAGAGTATAAATCAGATGCTTTCACCTTGTCTGATTGCATTAGCTCTTTGGACAAGCCTTTTTGGGAGGCTAAGCTGTGTTGGGACTCTGGTTTTATTGCATGGAGTAAGCTTTTGGGGGCACTTGACGCATTTCTAGGAGAACCAGCTAGCTCTGGGTTCGAGCGGCATTTCACCTCTAACCACAACTATCCACTGATTCTTCAACATCAGTTGCCGGGTCATCATCTCATCCATGATTCGGAAAGAGTGCTTTCATTCACTGCTTCACATACACTTGGAGTAGAGATGCTTAAAGGTTTAGGGTGTTCATTTCTTGCCAGTTTGGAAGCCAAACTGGTGCCAGAAAATTTGTTTCGTATTTGTTTGGAGCATGAGCAGGATCCAAATACCACAAAGATGTATGAAATGGTGGAAGCGCTTATCCCTCTTCAGCAGCGAATTTATTCCCTTTTAAATGAATATGAAGATCATCCACAGCTTCAGAAAATATTGGATATAATTGAAATGCTTTTGAATATTCCATTGCGCACCTTCTTGGCTAAGACTCTCTCAGGATTGCAGTTTTTAGTTAGATGCCTCGATTCATTAGAAGATGGCTCAAAATTCTCTTTTGCTGATCAAGTGAAGAAGCCCATTTATGATCTGCTGTACGCATGGAGAAAGTTGGAATTGGAGTCATGGCCGGCATTGCTTGACGAAGTGCAGGATCAATATGAGATTAATGCTGGAAAGTTGTGGTTTCCTCTTTACTCAGTTCTACGAAAGCGAACTTCTCCTGATGCTGCTGCCTACAAATTGTCTACTATCCAAAGTGTGGAGGACTTCATTCGCACATCCAGCATTGGCGAATTTAGAAAAAGACTACAACTTCTTTTCGCGTTCCTTGGCCATATAAAAACTGGCGTATGCCTGGAAGTTTACTCAAGTTATTACGAGAAGGAAAATGAAGAGATTTTGTACAATGCATTTGGATATTACGTGCAATTCTTACCAAAAATTCTCGCGCACATAGAATCTGGTAGAAGTGTTATTGAGAAGAAACTCAAAGATCTTCTCAAGCCATATCACTGGGAGCATCATGAGACTTCTCAGGAGCTCAGGCACATTATTGAGAAGAAACGCGCAGATCTTCTGTCCGTTGAAAAGTCCAAAACAACAAGGCAGAAGCTCAGGAAGATTATACAGGAGTACACAGTTCTGCTGGAACAACCTGTGATTGTCTTCCTTGAGCAAGATGCCGCTAAAGGAACTGAAACTTGTTCTCATCAAGGTCAGAATTTCGTCATTGATAATGTGAACAAAAAAATTAAGTTGATGGATGCTGCTTTTGATTGGACAGTTATCAATGATGAAGACAGGTGTATGTGGTATACTGGTTGGACCAAGAAAGCGGATTCTGCCCTGCGCAAATTACAGTGTGATACATTAATTGAGTTTGGACATTCAGAATCTGAAGGTCTTCATAACTCAGGAATCTGCTCAGAGGTTACAGGAGTTCCCAACCAATGGAGTGCTGTGTGGGACACACTTCAAAGAATAATTAGGAAGGCGATGGATTGTTGTGAGCTGTGGAAGGATGCAAACAAGAGTCAAAAGAAGGGGCGGAGTTTCTCTGACCTTCTAAATCTTTTAAAAAGCAGTGGTTTATCTAGAGATGTATTTACTGAGGATGAAGTTAATTCTTGGTGGTTCGTGGAGCCATCATTCGATGTTCAGCATTTGCTGCTAACACAGAGTAGACTGCCCCATCTTTCTGATGCAGCTCTTCCAGGCAACCTCCAGTGTTCTTCCCATCAGAATTTGGTTACAGAATGGAGAATGGCCAATGCATACTATTTCACAAGTGTGGAATCTGTTCTTTTCACTCACCAACAGGTTGGTGTGCCAGACCCTTATCTGCAACAATTCATCAAAATCCAACAAGATCAACACCAAGCTGCTAATAAGTTTGCAGAGAAGTTAAGGCGTTTGAAGGAATGCATTTCTACTTTTGAAAAATGCATTGATTTTGATGACGGAAATGGTAGCAAGTGCTCTATCGGTCAAAATCAACATGCCACATTGAATTGTATGTGGCAGCAGAAGCAACTGTTTGATAGTCTGTGTGCTGTGACGCATGATGAGGTTTTGTTGCTAAGGATATTTGAGAACACCCATTTAAACAAATGTCATATTACGAACAATGAAGCAAATGAGTTTCTTGCTTCTGTCGAGAAATTAATTCCAGAGCTCCAAAAGTCTAAGGAATCCTTGGACAATTATCTTCTTGGCCCAGAGAGAACAATTCAGCCTTCTCAATCCTTTATTACTTCAAAGCAGATGGAAAAATTAGTGATTCAAAATTTTGAGGTTATAAGGCAGTTTGAGGCCCATCTTCTTGCTTTCCGAGCCCAAGATGTGAAAAGCTCTGTTAAAGATATTTTGCTCCATCATCTTCTGGAAATATGTGAGAAGGTAAAATTGTTGGAAGTTGTATTTAATTCAGCGATGGACAAGAAAAAGGATTCAATCAGTGAACATGATATGGACGATTACCATAAAACAGATGCTGCATATCAGAAAGCCCTTAGAAGTACATTTGAACATATTGTTGAAGCAATGCAGAAATTGGGTTCACCAAGTAATGGCCAGGTTCATCCGGACAAGTCTTTGGGGCAAATTACATCCTGGGAAAAAATATTTAACATATTTGTCGAAAATCTGAGCTTGGATCAATTATGTGATAAGCTTCTAAGAACAATATTTTCTGCTGAAAAAATGGTAAATCATAGGGGTGGTGGATCTAGCAGTCCACTCATCCGAGTTGAAGCTGATTTTAAGCAGCTGCGTCTGTGTTTGGACATCTTCTTGGATTTTGGCCATGCTTTGTTAAAAGAACTTTTGGCCATGCAGAAAACTGTGTCTCTAACTACTCATATACTCGCGAGTCTTTTGGCTTTATCTTCAAATGGCCCTGTGATATCTCCTGAGGACAATGGGGATGATGCTACTCGTGATGTTTCTCAAGAACAAAATGGAACAGGTATGGGGGAGGGTGTTGGGCGGACTGATGTCAGCGATCAGATTACGAATGAAGACCAGTTGATTGTGGCATCAGAAAAGCCCAGCGAGGAAAAAGATGCCCCAGGTCAAGCCCCAAGTAAAGATGATAAAGGGATTGAGATGGAGGAAGATTTTGAAGCTGAGAAATTTAGTGTCAGTGAGGACTCCGAAGACGATACAAATCCAAATGATGATGAGGATGATGAGGATTTAGACACTGAAATTGGAAAGACTGGAGAAGATGGTGCATCAGTTGACGAGAAAGGTGGGAATAAGGATGAAGATGAAAATCCTAATAATGCAGATGAGAAGTATGATCCTGGGAGTTCAGTTGTTGATAAAGATGCAAGCTCTAGGGAGCTTAGAGCGAAGGGAGATTCTGATGCCACTAAGGAACTGGGAGAGCTTGATTCTGATGAACTTGACGAACCAAAGGGTGAAACTGGAAGCCAGGATGACCCTGTGGAGAATGTAGATGAAAAGAACCTGGATAAACAAGCAGATTTGGACCCTACAGAATTAACTCCTGATGATCCTGATGGCATGGATCAAAATTCTGCTGAAGAAATGGATTTGGATGATCCTGAAGTGCATGATAATTATGATGAGAATATTACACATGAAGATGACCATGAACGTCCAACCGATGAAACCATGGAAGAACCAGAGGCAGTGGTAGAAGAAATAGATGCAACCTTAGAAAGGGATGACTCTAGTAGGGATAAGGAAGAAAATACTGAGATGAATTCTGGAATGAGAAAAGATGTGTTCGAATCAGGATTATCTGACTCCATCAATGGTACTGAGCCTAATGCAGAATCTTCAACACAACCAAAGGGTGACTCAAAGACATCAGATGCAGAGGACATAGCACCAGAGTCAAACTGGGCAACTAACAATGAAGTCAATAATGAGCTCACACCAATCAGAAGTTTACCTTCCAATAATACCTCTGAGATGGATATGATGACTTCGGACTCATCAAATAATGGCAGAAATGTTGGTGAGCTGCCAAGAGGTCAACTGCCTAAGCAGGAAATGCCATCTGTTTGTAGAAGTCAACCAAATCCTTACCGTAGTATTGGGGATGCACTGAAGGAGTGGGAGGAAAGAGTAAGGGTGTCTGTAGATCTTCAGGAGGGTGATCTAGGGGCACAGGATGATATCGAGAATGAAAATGTGGAGGAGTTTGGATATGTTTCTGAGTATGAAAAGGGGACGGCTCAGGCTTTGGGACCTGCAACATCAGAGCAGATTGACAAAAATGCCAATGGTAATAAGACCAATGAAGATGGTATTTCAACGCACGAAGATGAGTTCGTTGAGATGGAAATTGAGAAGCTAAAAAATGAAACCCTCCCTAACAGGAGTTGCGACTCGATCCTTAAAAATAGGGTAGAGGATCAGACGCATCTTTCTGGTCTAGAGAAATTTCCTGATGAGGGATCTCAGCGTAATCATGATGATGGTGAACTTGAAAGCATGCTTGAGGATGTGGTTTCTATCAAGAAATCGTATTTGAGTGATGACATACATCAGCTCAGTAAACTTTCTGTAGATGACGATGACATGGGGAAAGCACAAGATCCTGGGGAGTTTTCTGATGAAGTTACAAAGAATGCTACTGCTCTCTGGAGTAGATATGAGAGGGTCACGACAAGGTTGTCCCAAGAGTTGGCTGAACAATTGCGTTTAGTCATGGAACCTACCCTGGCCAGCAAGCTTGAAGGAGATTATAAGACTGGGAAACGTATTAACATGAAGAAGGTGATTCCCTACATAGCAAGTGAGTACCAGAAAGATAAAATATGGCTAAGACGTACCCGGCCTAACAAACGTGATTATCAAGTTGTTATTGCTGTTGATGATTCCCGCAGTATGTCTGAGAGTTGCTGTGGGGATGTTGCTATTGAAGCTCTGGTGACAGTGTGTCGTGCAATGTCACAACTGGAAATGGGCAGCCTTGCTGTTGCAAGCTTTGGAAAGAAAGGCAACATAAGGTTGCTCCATGACTTTGATCAGCCCTTTACTGGAGACGCTGGAGTTAAGATGATCTCTGGTTTGTCATTCAAGCAAGAAAATACTATTCTTGATGAACCAGTTGTTGACCTATTGACGTTTGTGAACAAGAAGCTAGACACAGCAGTTGCAAGAGCAAGACTGCCGTCTGGACGGAATCCATTACAACAGCTTGTTTTGATAATTGCAGATGGTCATTTACATGAGAAGGAGAGGTTGAAACGTTGTGTTAGGGATGCCTTGGCTAAGAACCGGATGGTTGCATTTTTGCTTGTTGATAACCCACAGAATCCACAGAATTCCGTGACGAACATGCTCGAAACATGTTATGAGGGCGGGCAGGTCAAATTGACAAAGTACATGGAATCTTTTCCCTTCCCATACTACATTGTACTAAGGAATGTTGAGGCACTACCTAGGACCCTTGCTGATCTTCTGAGACAGTGGTTTGAGCTCATGCAGCAGAGAAGGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0003674 GO:0003824 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005911 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009526 GO:0009536 GO:0009553 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0022613 GO:0022618 GO:0030054 GO:0030684 GO:0030687 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0040008 GO:0042254 GO:0042255 GO:0042273 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0048229 GO:0048638 GO:0048856 GO:0050789 GO:0050793 GO:0055044 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

AAA_5

Protein Analysis

5481

Amino Acids

623.52

Weight (kDa)

5.36

Isoelectric Point (pI)

43.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_5	PF07728	368 - 488	2.6e-15	AAA domain (dynein-related subfamily)
AAA_lid_7	PF17867	517 - 631	2.3e-09	Midasin AAA lid domain
AAA_5	PF07728	691 - 737	1.7e-06	AAA domain (dynein-related subfamily)
AAA_5	PF07728	827 - 914	2.5e-07	AAA domain (dynein-related subfamily)
AAA_lid_5	PF17865	927 - 1029	1.1e-30	Midasin AAA lid domain
AAA_5	PF07728	1084 - 1220	1.9e-24	AAA domain (dynein-related subfamily)
AAA_lid_7	PF17867	1232 - 1329	6.3e-14	Midasin AAA lid domain
AAA_5	PF07728	1497 - 1596	6.4e-14	AAA domain (dynein-related subfamily)
MDN1_4th	PF21108	1609 - 1681	2.8e-06	Midasin AAA+ ATPase lid domain
AAA_5	PF07728	1787 - 1923	8.6e-11	AAA domain (dynein-related subfamily)
AAA_3	PF07726	1788 - 1923	2.7e-11	ATPase family associated with various cellular activities (AAA)
AAA_lid_7	PF17867	1938 - 2033	4e-17	Midasin AAA lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

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Orthologous Genes (Group: OG0007449)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67120 AT1G67120
fragaria_vesca	FvH4_6g34300
malus_domestica	MD05G1009600.v1.1
prunus_persica	Prupe.3G044200_v2.0.a1 Prupe.3G044200_v2.0.a1 Prupe.3G044200_v2.0.a1 Prupe.3G044200_v2.0.a1 Prupe.3G044200_v2.0.a1 Prupe.3G044200_v2.0.a1 Prupe.3G044200_v2.0.a1 Prupe.3G044200_v2.0.a1 Prupe.3G044200_v2.0.a1
pyrus_communis	pycom05g00490
rosa_chinensis	RchiOBHm_Chr2g0144641
rosa_laevigata	RLG00000016484 RLG00000020098
rosa_multiflora	Rmu_sc0000227.1_g000013
rosa_roxburghii	Rroxscaffold_2G00101100
rosa_rugosa	Rorug02G0388300
rosa_samantha	Rh2AG440300 Rh2BG450700 Rh2CG427400 Rh2DG460700
rosa_wichuraiana	Rw2G036020

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	6 cut(s)	2507, 2859, 3182, 9633, 13262, 15687
AasI	GACNNNNNNGTC	1 cut(s)	15613
Acc16I	TGCGCA	2 cut(s)	11435, 12314
Acc36I	ACCTGC	2 cut(s)	15196, 16300
Acc65I	GGTACC	1 cut(s)	4801
AccB1I	GGYRCC	4 cut(s)	241, 4801, 5302, 11245
AccB7I	CCANNNNNTGG	7 cut(s)	1884, 5387, 7013, 11722, 12414, 13532, 15625
AccBSI	CCGCTC	1 cut(s)	11071
AccI	GTMKAC	4 cut(s)	7153, 11708, 12278, 12646
AccII	CGCG	8 cut(s)	390, 2308, 3835, 4871, 11786, 11912, 12030, 13832
AccIII	TCCGGA	3 cut(s)	2563, 6911, 13546
AclI	AACGTT	2 cut(s)	3801, 16192
AcvI	CACGTG	1 cut(s)	6613
AcyI	GRCGYC	1 cut(s)	8691
AdeI	CACNNNGTG	1 cut(s)	8631
AfeI	AGCGCT	2 cut(s)	135, 11325
AflII	CTTAAG	2 cut(s)	713, 2164
AflIII	ACRYGT	8 cut(s)	2306, 5143, 8103, 8256, 8917, 10000, 10027, 16292
AgeI	ACCGGT	2 cut(s)	4782, 10346
AhdI	GACNNNNNGTC	1 cut(s)	15879
AhlI	ACTAGT	1 cut(s)	5396
AleI	CACNNNNGTG	1 cut(s)	12752
Alw44I	GTGCAC	1 cut(s)	1380
AlwNI	CAGNNNCTG	7 cut(s)	2125, 4157, 4183, 9188, 9212, 12359, 13457
Ama87I	CYCGRG	6 cut(s)	2036, 3639, 6456, 7026, 8276, 10718
Aor13HI	TCCGGA	3 cut(s)	2563, 6911, 13546
Aor51HI	AGCGCT	2 cut(s)	135, 11325
ApaI	GGGCCC	1 cut(s)	4545
ApaLI	GTGCAC	1 cut(s)	1380
ArsI	GACNNNNNNTTYG	4 cut(s)	5216, 5248, 10028, 10060
AseI	ATTAAT	3 cut(s)	11628, 12335, 13127
AsiGI	ACCGGT	2 cut(s)	4782, 10346
Asp718I	GGTACC	1 cut(s)	4801
AspA2I	CCTAGG	1 cut(s)	16385
AsuC2I	CCSGG	5 cut(s)	1275, 1668, 2669, 11124, 15775
AsuII	TTCGAA	2 cut(s)	4202, 14721
AsuNHI	GCTAGC	2 cut(s)	8117, 11054
AvaI	CYCGRG	6 cut(s)	2036, 3639, 6456, 7026, 8276, 10718
AvrII	CCTAGG	1 cut(s)	16385
AxyI	CCTNAGG	1 cut(s)	13875
BaeGI	GKGCMC	7 cut(s)	246, 1384, 4545, 6187, 8007, 11029, 15106
BamHI	GGATCC	4 cut(s)	4882, 6914, 9745, 11287
BanI	GGYRCC	4 cut(s)	241, 4801, 5302, 11245
BarI	GAAGNNNNNNTAC	4 cut(s)	1690, 1722, 4354, 4386
BauI	CACGAG	5 cut(s)	2315, 3219, 4580, 10671, 13899
BbrPI	CACGTG	1 cut(s)	6613
BbvCI	CCTCAGC	5 cut(s)	201, 5082, 5640, 8063, 10401
BceAI	ACGGC	3 cut(s)	6794, 15186, 16099
BcgI	CGANNNNNNTGC	4 cut(s)	4063, 4097, 6709, 6743
BciVI	GTATCC	5 cut(s)	1929, 3258, 6296, 9051, 9651
BclI	TGATCA	7 cut(s)	1201, 2140, 6324, 9835, 10072, 11524, 15967
BcnI	CCSGG	5 cut(s)	1275, 1668, 2669, 11124, 15775
BcuI	ACTAGT	1 cut(s)	5396
BfoI	RGCGCY	2 cut(s)	137, 11327
BfrI	CTTAAG	2 cut(s)	713, 2164
BfuAI	ACCTGC	2 cut(s)	15196, 16300
BfuI	GTATCC	5 cut(s)	1929, 3258, 6296, 9051, 9651
BglI	GCCNNNNNGGC	2 cut(s)	7763, 8065
BglII	AGATCT	7 cut(s)	2375, 4948, 8403, 9792, 11956, 12034, 15079
BlnI	CCTAGG	1 cut(s)	16385
BlpI	GCTNAGC	6 cut(s)	719, 2620, 4824, 6339, 9728, 10977
BmcAI	AGTACT	4 cut(s)	646, 2750, 4232, 6810
BmeRI	GACNNNNNGTC	1 cut(s)	15879
BmeT110I	CYCGRG	6 cut(s)	2036, 3639, 6456, 7026, 8276, 10718
BmrI	ACTGGG	8 cut(s)	2103, 2109, 6181, 7771, 11986, 14357, 14845, 15702
BmtI	GCTAGC	2 cut(s)	8121, 11058
BmuI	ACTGGG	8 cut(s)	2103, 2109, 6181, 7771, 11986, 14357, 14845, 15702
BoxI	GACNNNNGTC	5 cut(s)	4169, 4291, 4380, 13958, 16114
Bpu1102I	GCTNAGC	6 cut(s)	719, 2620, 4824, 6339, 9728, 10977
Bpu14I	TTCGAA	2 cut(s)	4202, 14721
BpuEI	CTTGAG	8 cut(s)	7265, 9009, 10706, 11815, 11948, 12155, 13896, 15458
BpuMI	CCSGG	5 cut(s)	1275, 1668, 2669, 11124, 15775
Bsa29I	ATCGAT	1 cut(s)	3511
BsaAI	YACGTR	2 cut(s)	6613, 11887
BsaBI	GATNNNNATC	8 cut(s)	885, 2778, 5805, 6284, 9438, 9744, 14130, 14238
BsaHI	GRCGYC	1 cut(s)	8691
BsaI	GGTCTC	6 cut(s)	1596, 1904, 2561, 2805, 2937, 5051
BsaWI	WCCGGW	8 cut(s)	2563, 4782, 6057, 6308, 6911, 10346, 13546, 16221
BsaXI	ACNNNNNCTCC	7 cut(s)	31, 93, 123, 1923, 1953, 6166, 6196
Bse118I	RCCGGY	4 cut(s)	1124, 4782, 10346, 11590
Bse21I	CCTNAGG	1 cut(s)	13875
Bse3DI	GCAATG	9 cut(s)	2520, 4563, 5324, 7038, 9649, 11429, 11594, 13512, 15894
Bse8I	GATNNNNATC	8 cut(s)	885, 2778, 5805, 6284, 9438, 9744, 14130, 14238
BseAI	TCCGGA	3 cut(s)	2563, 6911, 13546
BseCI	ATCGAT	1 cut(s)	3511
BseJI	GATNNNNATC	8 cut(s)	885, 2778, 5805, 6284, 9438, 9744, 14130, 14238
BseMI	GCAATG	9 cut(s)	2520, 4563, 5324, 7038, 9649, 11429, 11594, 13512, 15894
BseSI	GKGCMC	7 cut(s)	246, 1384, 4545, 6187, 8007, 11029, 15106
BseX3I	CGGCCG	1 cut(s)	3719
BseYI	CCCAGC	7 cut(s)	341, 2129, 3809, 3849, 7257, 9845, 14012
BsgI	GTGCAG	5 cut(s)	12, 4193, 5141, 6180, 11630
Bsh1236I	CGCG	8 cut(s)	390, 2308, 3835, 4871, 11786, 11912, 12030, 13832
Bsh1285I	CGRYCG	3 cut(s)	49, 68, 3722
BshNI	GGYRCC	4 cut(s)	241, 4801, 5302, 11245
BshTI	ACCGGT	2 cut(s)	4782, 10346
BshVI	ATCGAT	1 cut(s)	3511
BsiEI	CGRYCG	3 cut(s)	49, 68, 3722
BsiHKCI	CYCGRG	6 cut(s)	2036, 3639, 6456, 7026, 8276, 10718
BsmBI	CGTCTC	4 cut(s)	3894, 6769, 10719, 15978
Bso31I	GGTCTC	6 cut(s)	1596, 1904, 2561, 2805, 2937, 5051
BsoBI	CYCGRG	6 cut(s)	2036, 3639, 6456, 7026, 8276, 10718
Bsp119I	TTCGAA	2 cut(s)	4202, 14721
Bsp120I	GGGCCC	1 cut(s)	4541
Bsp13I	TCCGGA	3 cut(s)	2563, 6911, 13546
Bsp1407I	TGTACA	4 cut(s)	312, 5843, 8232, 11865
Bsp1720I	GCTNAGC	6 cut(s)	719, 2620, 4824, 6339, 9728, 10977
Bsp19I	CCATGG	3 cut(s)	3054, 7887, 14604
Bsp68I	TCGCGA	1 cut(s)	13832
BspDI	ATCGAT	1 cut(s)	3511
BspEI	TCCGGA	3 cut(s)	2563, 6911, 13546
BspFNI	CGCG	8 cut(s)	390, 2308, 3835, 4871, 11786, 11912, 12030, 13832
BspHI	TCATGA	5 cut(s)	361, 4702, 6738, 11986, 15409
BspMAI	CTGCAG	8 cut(s)	644, 696, 2895, 3313, 4333, 5553, 6969, 9927
BspMI	ACCTGC	2 cut(s)	15196, 16300
BspOI	GCTAGC	2 cut(s)	8121, 11058
BspQI	GCTCTTC	4 cut(s)	2012, 4779, 8661, 12678
BspT104I	TTCGAA	2 cut(s)	4202, 14721
BspT107I	GGYRCC	4 cut(s)	241, 4801, 5302, 11245
BspTI	CTTAAG	2 cut(s)	713, 2164
BspTNI	GGTCTC	6 cut(s)	1596, 1904, 2561, 2805, 2937, 5051
BsrBI	CCGCTC	1 cut(s)	11071
BsrDI	GCAATG	9 cut(s)	2520, 4563, 5324, 7038, 9649, 11429, 11594, 13512, 15894
BsrFI	RCCGGY	4 cut(s)	1124, 4782, 10346, 11590
BsrGI	TGTACA	4 cut(s)	312, 5843, 8232, 11865
BssAI	RCCGGY	4 cut(s)	1124, 4782, 10346, 11590
BssNAI	GTATAC	2 cut(s)	7154, 12279
BssNI	GRCGYC	1 cut(s)	8691
BssSI	CACGAG	5 cut(s)	2315, 3219, 4580, 10671, 13899
Bst1107I	GTATAC	2 cut(s)	7154, 12279
Bst2BI	CACGAG	5 cut(s)	2315, 3219, 4580, 10671, 13899
BstACI	GRCGYC	1 cut(s)	8691
BstAFI	CTTAAG	2 cut(s)	713, 2164
BstAPI	GCANNNNNTGC	3 cut(s)	5220, 12631, 14989
BstAUI	TGTACA	4 cut(s)	312, 5843, 8232, 11865
BstBAI	YACGTR	2 cut(s)	6613, 11887
BstBI	TTCGAA	2 cut(s)	4202, 14721
BstDSI	CCRYGG	4 cut(s)	3054, 6122, 7887, 14604
BstEII	GGTNACC	1 cut(s)	8456
BstENI	CCTNNNNNAGG	4 cut(s)	2575, 4550, 4922, 14650
BstFNI	CGCG	8 cut(s)	390, 2308, 3835, 4871, 11786, 11912, 12030, 13832
BstH2I	RGCGCY	2 cut(s)	137, 11327
BstMCI	CGRYCG	3 cut(s)	49, 68, 3722
BstPAI	GACNNNNGTC	5 cut(s)	4169, 4291, 4380, 13958, 16114
BstPI	GGTNACC	1 cut(s)	8456
BstSLI	GKGCMC	7 cut(s)	246, 1384, 4545, 6187, 8007, 11029, 15106
BstUI	CGCG	8 cut(s)	390, 2308, 3835, 4871, 11786, 11912, 12030, 13832
BstXI	CCANNNNNNTGG	6 cut(s)	1169, 1655, 7074, 8831, 11976, 12785
BstZ17I	GTATAC	2 cut(s)	7154, 12279
BstZI	CGGCCG	1 cut(s)	3719
Bsu15I	ATCGAT	1 cut(s)	3511
Bsu36I	CCTNAGG	1 cut(s)	13875
BsuI	GTATCC	5 cut(s)	1929, 3258, 6296, 9051, 9651
BsuTUI	ATCGAT	1 cut(s)	3511
BtgI	CCRYGG	4 cut(s)	3054, 6122, 7887, 14604
BtgZI	GCGATG	4 cut(s)	1465, 5891, 12473, 13409
BtsI	GCAGTG	7 cut(s)	5105, 5225, 7641, 9623, 11166, 12553, 14628
BtuMI	TCGCGA	1 cut(s)	13832
BveI	ACCTGC	2 cut(s)	15196, 16300
CaiI	CAGNNNCTG	7 cut(s)	2125, 4157, 4183, 9188, 9212, 12359, 13457
CciI	TCATGA	5 cut(s)	361, 4702, 6738, 11986, 15409
CciNI	GCGGCCGC	1 cut(s)	3719
Cfr10I	RCCGGY	4 cut(s)	1124, 4782, 10346, 11590
ClaI	ATCGAT	1 cut(s)	3511
CseI	GACGC	6 cut(s)	8699, 11042, 13030, 13724, 15367, 15995
CsiI	ACCWGGT	2 cut(s)	3607, 9364
CspAI	ACCGGT	2 cut(s)	4782, 10346
CspCI	CAANNNNNGTGG	6 cut(s)	256, 291, 7286, 7321, 9128, 9163
DraI	TTTAAA	9 cut(s)	2449, 2949, 3166, 6675, 8128, 10681, 11361, 12540, 13068
DraIII	CACNNNGTG	1 cut(s)	8631
DrdI	GACNNNNNNGTC	1 cut(s)	15613
DriI	GACNNNNNGTC	1 cut(s)	15879
DseDI	GACNNNNNNGTC	1 cut(s)	15613
EagI	CGGCCG	1 cut(s)	3719
Eam1105I	GACNNNNNGTC	1 cut(s)	15879
EciI	GGCGGA	4 cut(s)	9633, 10036, 12526, 13966
Ecl136II	GAGCTC	7 cut(s)	2005, 3535, 4828, 12004, 13138, 14866, 16423
EclXI	CGGCCG	1 cut(s)	3719
Eco147I	AGGCCT	1 cut(s)	5742
Eco31I	GGTCTC	6 cut(s)	1596, 1904, 2561, 2805, 2937, 5051
Eco32I	GATATC	4 cut(s)	537, 1661, 13869, 15115
Eco47III	AGCGCT	2 cut(s)	135, 11325
Eco52I	CGGCCG	1 cut(s)	3719
Eco53kI	GAGCTC	7 cut(s)	2005, 3535, 4828, 12004, 13138, 14866, 16423
Eco72I	CACGTG	1 cut(s)	6613
Eco81I	CCTNAGG	1 cut(s)	13875
Eco88I	CYCGRG	6 cut(s)	2036, 3639, 6456, 7026, 8276, 10718
Eco91I	GGTNACC	1 cut(s)	8456
EcoICRI	GAGCTC	7 cut(s)	2005, 3535, 4828, 12004, 13138, 14866, 16423
EcoNI	CCTNNNNNAGG	4 cut(s)	2575, 4550, 4922, 14650
EcoO109I	RGGNCCY	7 cut(s)	2122, 3266, 4542, 4676, 4997, 15185, 16389
EcoO65I	GGTNACC	1 cut(s)	8456
EcoRI	GAATTC	5 cut(s)	6231, 8086, 10054, 14695, 16267
EcoRV	GATATC	4 cut(s)	537, 1661, 13869, 15115
EcoT22I	ATGCAT	8 cut(s)	766, 5011, 5326, 7567, 11875, 12739, 12890, 12911
Esp3I	CGTCTC	4 cut(s)	3894, 6769, 10719, 15978
FauI	CCCGC	9 cut(s)	814, 1124, 2703, 3924, 6929, 8841, 10891, 15830, 16298
FauNDI	CATATG	3 cut(s)	3112, 8045, 10824
FbaI	TGATCA	7 cut(s)	1201, 2140, 6324, 9835, 10072, 11524, 15967
FblI	GTMKAC	4 cut(s)	7153, 11708, 12278, 12646
FspI	TGCGCA	2 cut(s)	11435, 12314
GsaI	CCCAGC	7 cut(s)	345, 2133, 3813, 3853, 7261, 9849, 14016
HaeII	RGCGCY	2 cut(s)	137, 11327
HgaI	GACGC	6 cut(s)	8699, 11042, 13030, 13724, 15367, 15995
Hin1I	GRCGYC	1 cut(s)	8691
HpaI	GTTAAC	2 cut(s)	1857, 7003
Hpy99I	CGWCG	1 cut(s)	8590
Hsp92I	GRCGYC	1 cut(s)	8691
Kpn2I	TCCGGA	3 cut(s)	2563, 6911, 13546
KpnI	GGTACC	1 cut(s)	4805
KroI	GCCGGC	1 cut(s)	11590
KroNI	GCCGGC	1 cut(s)	11592
Ksp22I	TGATCA	7 cut(s)	1201, 2140, 6324, 9835, 10072, 11524, 15967
KspAI	GTTAAC	2 cut(s)	1857, 7003
LguI	GCTCTTC	4 cut(s)	2012, 4779, 8661, 12678
MabI	ACCWGGT	2 cut(s)	3607, 9364
MbiI	CCGCTC	1 cut(s)	11071
MfeI	CAATTG	4 cut(s)	2352, 6494, 7617, 15635
MluI	ACGCGT	1 cut(s)	2306
Mph1103I	ATGCAT	8 cut(s)	766, 5011, 5326, 7567, 11875, 12739, 12890, 12911
MroI	TCCGGA	3 cut(s)	2563, 6911, 13546
MroNI	GCCGGC	1 cut(s)	11590
MspA1I	CMGCKG	8 cut(s)	995, 1052, 1131, 3849, 8062, 9945, 10252, 13732
MspCI	CTTAAG	2 cut(s)	713, 2164
MunI	CAATTG	4 cut(s)	2352, 6494, 7617, 15635
MvnI	CGCG	8 cut(s)	390, 2308, 3835, 4871, 11786, 11912, 12030, 13832
NaeI	GCCGGC	1 cut(s)	11592
NciI	CCSGG	5 cut(s)	1275, 1668, 2669, 11124, 15775
NcoI	CCATGG	3 cut(s)	3054, 7887, 14604
NdeI	CATATG	3 cut(s)	3112, 8045, 10824
NgoMIV	GCCGGC	1 cut(s)	11590
NheI	GCTAGC	2 cut(s)	8117, 11054
NmeAIII	GCCGAG	1 cut(s)	4690
NotI	GCGGCCGC	1 cut(s)	3719
NruI	TCGCGA	1 cut(s)	13832
NsbI	TGCGCA	2 cut(s)	11435, 12314
NsiI	ATGCAT	8 cut(s)	766, 5011, 5326, 7567, 11875, 12739, 12890, 12911
NspV	TTCGAA	2 cut(s)	4202, 14721
OliI	CACNNNNGTG	1 cut(s)	12752
PaeI	GCATGC	3 cut(s)	371, 5218, 15436
PaeR7I	CTCGAG	3 cut(s)	2036, 8276, 10718
PagI	TCATGA	5 cut(s)	361, 4702, 6738, 11986, 15409
PasI	CCCWGGG	3 cut(s)	5934, 7485, 7695
PceI	AGGCCT	1 cut(s)	5742
PciI	ACATGT	6 cut(s)	5143, 8103, 8256, 8917, 10027, 16292
PciSI	GCTCTTC	4 cut(s)	2012, 4779, 8661, 12678
PcsI	WCGNNNNNNNCGW	1 cut(s)	5968
PdiI	GCCGGC	1 cut(s)	11592
PflMI	CCANNNNNTGG	7 cut(s)	1884, 5387, 7013, 11722, 12414, 13532, 15625
PfoI	TCCNGGA	3 cut(s)	1941, 3414, 4878
PinAI	ACCGGT	2 cut(s)	4782, 10346
Ple19I	CGATCG	2 cut(s)	49, 68
PmaCI	CACGTG	1 cut(s)	6613
PmlI	CACGTG	1 cut(s)	6613
Ppu21I	YACGTR	2 cut(s)	6613, 11887
PpuMI	RGGWCCY	4 cut(s)	2122, 4676, 15185, 16389
PscI	ACATGT	6 cut(s)	5143, 8103, 8256, 8917, 10027, 16292
PshAI	GACNNNNGTC	5 cut(s)	4169, 4291, 4380, 13958, 16114
PshBI	ATTAAT	3 cut(s)	11628, 12335, 13127
PsiI	TTATAA	6 cut(s)	2507, 2859, 3182, 9633, 13262, 15687
Psp124BI	GAGCTC	7 cut(s)	2007, 3537, 4830, 12006, 13140, 14868, 16425
Psp1406I	AACGTT	2 cut(s)	3801, 16192
Psp5II	RGGWCCY	4 cut(s)	2122, 4676, 15185, 16389
PspCI	CACGTG	1 cut(s)	6613
PspEI	GGTNACC	1 cut(s)	8456
PspFI	CCCAGC	7 cut(s)	341, 2129, 3809, 3849, 7257, 9845, 14012
PspOMI	GGGCCC	1 cut(s)	4541
PspPPI	RGGWCCY	4 cut(s)	2122, 4676, 15185, 16389
PspXI	VCTCGAGB	1 cut(s)	2036
PsrI	GAACNNNNNNTAC	2 cut(s)	6427, 6459
PstI	CTGCAG	8 cut(s)	644, 696, 2895, 3313, 4333, 5553, 6969, 9927
PstNI	CAGNNNCTG	7 cut(s)	2125, 4157, 4183, 9188, 9212, 12359, 13457
PvuI	CGATCG	2 cut(s)	49, 68
PvuII	CAGCTG	4 cut(s)	995, 1052, 10252, 13732
RruI	TCGCGA	1 cut(s)	13832
SacI	GAGCTC	7 cut(s)	2007, 3537, 4830, 12006, 13140, 14868, 16425
SapI	GCTCTTC	4 cut(s)	2012, 4779, 8661, 12678
ScaI	AGTACT	4 cut(s)	646, 2750, 4232, 6810
SexAI	ACCWGGT	2 cut(s)	3607, 9364
Sfr274I	CTCGAG	3 cut(s)	2036, 8276, 10718
SfuI	TTCGAA	2 cut(s)	4202, 14721
SlaI	CTCGAG	3 cut(s)	2036, 8276, 10718
SpeI	ACTAGT	1 cut(s)	5396
SphI	GCATGC	3 cut(s)	371, 5218, 15436
SseBI	AGGCCT	1 cut(s)	5742
SspI	AATATT	9 cut(s)	5697, 7056, 8487, 9202, 11397, 11425, 13587, 13650, 14563
SstI	GAGCTC	7 cut(s)	2007, 3537, 4830, 12006, 13140, 14868, 16425
StuI	AGGCCT	1 cut(s)	5742
TaqII	GACCGA	2 cut(s)	7424, 12938
TauI	GCSGC	8 cut(s)	3721, 3724, 6973, 8062, 9649, 9700, 11074, 12149
Van91I	CCANNNNNTGG	7 cut(s)	1884, 5387, 7013, 11722, 12414, 13532, 15625
Vha464I	CTTAAG	2 cut(s)	713, 2164
VneI	GTGCAC	1 cut(s)	1380
VspI	ATTAAT	3 cut(s)	11628, 12335, 13127
XagI	CCTNNNNNAGG	4 cut(s)	2575, 4550, 4922, 14650
XbaI	TCTAGA	4 cut(s)	3463, 4408, 12557, 15373
XcmI	CCANNNNNNNNNTGG	4 cut(s)	8884, 11804, 14344, 14832
XhoI	CTCGAG	3 cut(s)	2036, 8276, 10718
XmaJI	CCTAGG	1 cut(s)	16385
XmiI	GTMKAC	4 cut(s)	7153, 11708, 12278, 12646
ZrmI	AGTACT	4 cut(s)	646, 2750, 4232, 6810
Zsp2I	ATGCAT	8 cut(s)	766, 5011, 5326, 7567, 11875, 12739, 12890, 12911

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.