Helicase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0068041 |
| rosa_multiflora | Rmu_sc0000435.1_g000026 |
| rosa_samantha | Rh5BG463900 Rh5CG485900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 102 |
| Acc36I | ACCTGC | 1 cut(s) | 94 |
| AciI | CCGC | 1 cut(s) | 263 |
| AcsI | RAATTY | 3 cut(s) | 76, 128, 143 |
| AfaI | GTAC | 1 cut(s) | 220 |
| AgsI | TTSAA | 1 cut(s) | 76 |
| AjnI | CCWGG | 2 cut(s) | 160, 297 |
| AoxI | GGCC | 1 cut(s) | 184 |
| ApoI | RAATTY | 3 cut(s) | 76, 128, 143 |
| AspLEI | GCGC | 1 cut(s) | 103 |
| BccI | CCATC | 2 cut(s) | 3, 128 |
| BceAI | ACGGC | 3 cut(s) | 36, 171, 222 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 330 |
| BciT130I | CCWGG | 2 cut(s) | 162, 299 |
| BclI | TGATCA | 1 cut(s) | 334 |
| BfaI | CTAG | 2 cut(s) | 251, 303 |
| BfuAI | ACCTGC | 1 cut(s) | 94 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 192 |
| Bme1390I | CCNGG | 2 cut(s) | 162, 299 |
| BmrFI | CCNGG | 2 cut(s) | 162, 299 |
| BmsI | GCATC | 2 cut(s) | 35, 350 |
| BseBI | CCWGG | 2 cut(s) | 162, 299 |
| BseMII | CTCAG | 1 cut(s) | 324 |
| BshFI | GGCC | 1 cut(s) | 186 |
| BsnI | GGCC | 1 cut(s) | 186 |
| Bsp143I | GATC | 1 cut(s) | 334 |
| BspACI | CCGC | 1 cut(s) | 263 |
| BspANI | GGCC | 1 cut(s) | 186 |
| BspCNI | CTCAG | 1 cut(s) | 323 |
| BspMI | ACCTGC | 1 cut(s) | 94 |
| BssMI | GATC | 1 cut(s) | 334 |
| Bst2UI | CCWGG | 2 cut(s) | 162, 299 |
| Bst4CI | ACNGT | 2 cut(s) | 23, 223 |
| Bst6I | CTCTTC | 1 cut(s) | 249 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 188 |
| BstC8I | GCNNGC | 2 cut(s) | 184, 193 |
| BstDEI | CTNAG | 1 cut(s) | 310 |
| BstHHI | GCGC | 1 cut(s) | 103 |
| BstKTI | GATC | 1 cut(s) | 337 |
| BstMBI | GATC | 1 cut(s) | 334 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 188, 192 |
| BstNI | CCWGG | 2 cut(s) | 162, 299 |
| BstNSI | RCATGY | 1 cut(s) | 279 |
| BstSCI | CCNGG | 2 cut(s) | 160, 297 |
| BsuRI | GGCC | 1 cut(s) | 186 |
| BtsIMutI | CAGTG | 1 cut(s) | 28 |
| BveI | ACCTGC | 1 cut(s) | 94 |
| Cac8I | GCNNGC | 2 cut(s) | 184, 193 |
| CfoI | GCGC | 1 cut(s) | 103 |
| Csp6I | GTAC | 1 cut(s) | 219 |
| CviAII | CATG | 2 cut(s) | 276, 338 |
| CviJI | RGCY | 4 cut(s) | 51, 186, 302, 320 |
| CviKI_1 | RGCY | 4 cut(s) | 51, 186, 302, 320 |
| CviQI | GTAC | 1 cut(s) | 219 |
| DdeI | CTNAG | 1 cut(s) | 310 |
| DpnI | GATC | 1 cut(s) | 336 |
| DpnII | GATC | 1 cut(s) | 334 |
| Eam1104I | CTCTTC | 1 cut(s) | 249 |
| EarI | CTCTTC | 1 cut(s) | 249 |
| EcoRI | GAATTC | 1 cut(s) | 76 |
| EcoRII | CCWGG | 2 cut(s) | 160, 297 |
| EcoT22I | ATGCAT | 2 cut(s) | 47, 343 |
| FaeI | CATG | 2 cut(s) | 279, 341 |
| FaiI | YATR | 8 cut(s) | 43, 60, 270, 277, 282, 328, 333, 339 |
| FatI | CATG | 2 cut(s) | 275, 337 |
| FauI | CCCGC | 1 cut(s) | 256 |
| FbaI | TGATCA | 1 cut(s) | 334 |
| FspBI | CTAG | 2 cut(s) | 251, 303 |
| FspI | TGCGCA | 1 cut(s) | 102 |
| GlaI | GCGC | 1 cut(s) | 102 |
| HaeIII | GGCC | 1 cut(s) | 186 |
| HhaI | GCGC | 1 cut(s) | 103 |
| Hin1II | CATG | 2 cut(s) | 279, 341 |
| Hin6I | GCGC | 1 cut(s) | 101 |
| HinP1I | GCGC | 1 cut(s) | 101 |
| HinfI | GANTC | 1 cut(s) | 306 |
| Hpy188III | TCNNGA | 2 cut(s) | 73, 92 |
| HpyCH4III | ACNGT | 2 cut(s) | 23, 223 |
| HpyCH4V | TGCA | 4 cut(s) | 26, 45, 294, 341 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 188, 192 |
| HpyF3I | CTNAG | 1 cut(s) | 310 |
| Hsp92II | CATG | 2 cut(s) | 279, 341 |
| HspAI | GCGC | 1 cut(s) | 101 |
| Ksp22I | TGATCA | 1 cut(s) | 334 |
| Kzo9I | GATC | 1 cut(s) | 334 |
| LpnPI | CCDG | 9 cut(s) | 89, 98, 147, 168, 174, 177, 181, 284, 311 |
| LweI | GCATC | 2 cut(s) | 35, 350 |
| MaeI | CTAG | 2 cut(s) | 251, 303 |
| MalI | GATC | 1 cut(s) | 336 |
| MboI | GATC | 1 cut(s) | 334 |
| MboII | GAAGA | 3 cut(s) | 266, 336, 339 |
| MluCI | AATT | 4 cut(s) | 76, 128, 143, 213 |
| MmeI | TCCRAC | 1 cut(s) | 266 |
| MnlI | CCTC | 2 cut(s) | 194, 252 |
| Mph1103I | ATGCAT | 2 cut(s) | 47, 343 |
| MseI | TTAA | 1 cut(s) | 122 |
| MslI | CAYNNNNRTG | 1 cut(s) | 176 |
| MspR9I | CCNGG | 2 cut(s) | 162, 299 |
| MvaI | CCWGG | 2 cut(s) | 162, 299 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 188, 192 |
| NdeII | GATC | 1 cut(s) | 334 |
| NlaIII | CATG | 2 cut(s) | 279, 341 |
| NsbI | TGCGCA | 1 cut(s) | 102 |
| NsiI | ATGCAT | 2 cut(s) | 47, 343 |
| NspI | RCATGY | 1 cut(s) | 279 |
| PfeI | GAWTC | 1 cut(s) | 306 |
| Psp6I | CCWGG | 2 cut(s) | 160, 297 |
| PspGI | CCWGG | 2 cut(s) | 160, 297 |
| RsaI | GTAC | 1 cut(s) | 220 |
| RsaNI | GTAC | 1 cut(s) | 219 |
| RseI | CAYNNNNRTG | 1 cut(s) | 176 |
| SaqAI | TTAA | 1 cut(s) | 122 |
| Sau3AI | GATC | 1 cut(s) | 334 |
| ScrFI | CCNGG | 2 cut(s) | 162, 299 |
| SetI | ASST | 2 cut(s) | 87, 108 |
| SfaNI | GCATC | 2 cut(s) | 35, 350 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 176 |
| Sse9I | AATT | 4 cut(s) | 76, 128, 143, 213 |
| SsiI | CCGC | 1 cut(s) | 263 |
| SspMI | CTAG | 2 cut(s) | 251, 303 |
| StyD4I | CCNGG | 2 cut(s) | 160, 297 |
| TaaI | ACNGT | 2 cut(s) | 23, 223 |
| TasI | AATT | 4 cut(s) | 76, 128, 143, 213 |
| TfiI | GAWTC | 1 cut(s) | 306 |
| Tru1I | TTAA | 1 cut(s) | 122 |
| Tru9I | TTAA | 1 cut(s) | 122 |
| TscAI | CASTG | 1 cut(s) | 28 |
| TspDTI | ATGAA | 2 cut(s) | 258, 285 |
| TspRI | CASTG | 1 cut(s) | 28 |
| XapI | RAATTY | 3 cut(s) | 76, 128, 143 |
| XceI | RCATGY | 1 cut(s) | 279 |
| XspI | CTAG | 2 cut(s) | 251, 303 |
| Zsp2I | ATGCAT | 2 cut(s) | 47, 343 |