Rmu_sc0000469.1_g000030

alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000469.1
Physical Location & Seq
Forward (+)
161059 .. 161424
366 bp
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UTR
Exon/CDS
Intron
Rmu_sc0000469.1_g000030.1.cds

Sequence Viewer

Length: 276 bp
atgaccaatggtggagttgatagtagtgttgagtgcactggaagcatccaggctatgatcactgccgttgaatatgttcatgatagttggggggttgctgtacatgttggagttccaaacaaagactatgcatttaaaacccgtccgatgaacttcttgaatgagaggactcttaagggtactttctatggtaactacaagccccgcactgatctacctggtgttgtggagaagtacatgaacaaggtaatcacacttgctgaagccccatactga

Protein Analysis

91

Amino Acids

10.09

Weight (kDa)

6.71

Isoelectric Point (pI)

32.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022540)

Species Orthologous Gene IDs
pyrus_communis pycom05g16650
rosa_multiflora Rmu_co8055068.1_g000001 Rmu_sc0000469.1_g000030
rosa_roxburghii Rroxscaffold_7G00191480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 205
AfaI GTAC 3 cut(s) 102, 181, 236
AflII CTTAAG 1 cut(s) 173
AflIII ACRYGT 1 cut(s) 103
AgsI TTSAA 2 cut(s) 71, 160
AjnI CCWGG 2 cut(s) 48, 217
Alw21I GWGCWC 1 cut(s) 38
Alw44I GTGCAC 1 cut(s) 34
ApaLI GTGCAC 1 cut(s) 34
Asp700I GAANNNNTTC 1 cut(s) 75
BaeGI GKGCMC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 38
BceAI ACGGC 1 cut(s) 50
BciT130I CCWGG 2 cut(s) 50, 219
BclI TGATCA 1 cut(s) 57
BfrI CTTAAG 1 cut(s) 173
Bme1390I CCNGG 2 cut(s) 50, 219
BmrFI CCNGG 2 cut(s) 50, 219
BmsI GCATC 1 cut(s) 54
Bse1I ACTGG 1 cut(s) 43
BseBI CCWGG 2 cut(s) 50, 219
BseGI GGATG 1 cut(s) 45
BseNI ACTGG 1 cut(s) 43
BseSI GKGCMC 1 cut(s) 38
BsiHKAI GWGCWC 1 cut(s) 38
Bsp1286I GDGCHC 1 cut(s) 38
Bsp1407I TGTACA 1 cut(s) 100
Bsp143I GATC 2 cut(s) 57, 211
BspACI CCGC 1 cut(s) 205
BspHI TCATGA 1 cut(s) 79
BspTI CTTAAG 1 cut(s) 173
BsrGI TGTACA 1 cut(s) 100
BsrI ACTGG 1 cut(s) 43
BssMI GATC 2 cut(s) 57, 211
Bst2UI CCWGG 2 cut(s) 50, 219
BstAFI CTTAAG 1 cut(s) 173
BstAUI TGTACA 1 cut(s) 100
BstF5I GGATG 1 cut(s) 45
BstKTI GATC 2 cut(s) 60, 214
BstMBI GATC 2 cut(s) 57, 211
BstMWI GCNNNNNNNGC 1 cut(s) 42
BstNI CCWGG 2 cut(s) 50, 219
BstNSI RCATGY 1 cut(s) 107
BstSCI CCNGG 2 cut(s) 48, 217
BstSLI GKGCMC 1 cut(s) 38
BtsCI GGATG 1 cut(s) 45
BtsI GCAGTG 1 cut(s) 60
BtsIMutI CAGTG 3 cut(s) 36, 60, 207
CciI TCATGA 1 cut(s) 79
CsiI ACCWGGT 1 cut(s) 217
Csp6I GTAC 3 cut(s) 101, 180, 235
CviAII CATG 3 cut(s) 80, 104, 238
CviJI RGCY 3 cut(s) 53, 202, 266
CviKI_1 RGCY 3 cut(s) 53, 202, 266
CviQI GTAC 3 cut(s) 101, 180, 235
DpnI GATC 2 cut(s) 59, 213
DpnII GATC 2 cut(s) 57, 211
DraI TTTAAA 1 cut(s) 136
EcoRII CCWGG 2 cut(s) 48, 217
EcoT22I ATGCAT 1 cut(s) 133
FaeI CATG 3 cut(s) 83, 107, 241
FaiI YATR 8 cut(s) 56, 75, 81, 105, 129, 189, 239, 271
FatI CATG 3 cut(s) 79, 103, 237
FauI CCCGC 1 cut(s) 212
FbaI TGATCA 1 cut(s) 57
FokI GGATG 1 cut(s) 32
Hin1II CATG 3 cut(s) 83, 107, 241
HinfI GANTC 1 cut(s) 169
Hpy166II GTNNAC 1 cut(s) 36
Hpy188I TCNGA 1 cut(s) 147
Hpy188III TCNNGA 2 cut(s) 80, 157
Hpy8I GTNNAC 1 cut(s) 36
HpyCH4V TGCA 2 cut(s) 36, 131
HpyF10VI GCNNNNNNNGC 1 cut(s) 42
Hsp92II CATG 3 cut(s) 83, 107, 241
Ksp22I TGATCA 1 cut(s) 57
Kzo9I GATC 2 cut(s) 57, 211
LpnPI CCDG 5 cut(s) 24, 35, 62, 204, 231
LweI GCATC 1 cut(s) 54
MabI ACCWGGT 1 cut(s) 217
MaeIII GTNAC 1 cut(s) 191
MalI GATC 2 cut(s) 59, 213
MboI GATC 2 cut(s) 57, 211
MhlI GDGCHC 1 cut(s) 38
MlyI GAGTC 1 cut(s) 163
MmeI TCCRAC 1 cut(s) 88
MnlI CCTC 1 cut(s) 159
Mph1103I ATGCAT 1 cut(s) 133
MroXI GAANNNNTTC 1 cut(s) 75
MseI TTAA 2 cut(s) 135, 174
MspCI CTTAAG 1 cut(s) 173
MspR9I CCNGG 2 cut(s) 50, 219
MvaI CCWGG 2 cut(s) 50, 219
MwoI GCNNNNNNNGC 1 cut(s) 42
NdeII GATC 2 cut(s) 57, 211
NlaIII CATG 3 cut(s) 83, 107, 241
NsiI ATGCAT 1 cut(s) 133
NspI RCATGY 1 cut(s) 107
PagI TCATGA 1 cut(s) 79
PciI ACATGT 1 cut(s) 103
PdmI GAANNNNTTC 1 cut(s) 75
PleI GAGTC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 163
PscI ACATGT 1 cut(s) 103
Psp6I CCWGG 2 cut(s) 48, 217
PspGI CCWGG 2 cut(s) 48, 217
RsaI GTAC 3 cut(s) 102, 181, 236
RsaNI GTAC 3 cut(s) 101, 180, 235
SaqAI TTAA 2 cut(s) 135, 174
Sau3AI GATC 2 cut(s) 57, 211
SchI GAGTC 1 cut(s) 163
ScrFI CCNGG 2 cut(s) 50, 219
SduI GDGCHC 1 cut(s) 38
SetI ASST 2 cut(s) 220, 249
SexAI ACCWGGT 1 cut(s) 217
SfaNI GCATC 1 cut(s) 54
SmlI CTYRAG 1 cut(s) 173
SmoI CTYRAG 1 cut(s) 173
SsiI CCGC 1 cut(s) 205
StyD4I CCNGG 2 cut(s) 48, 217
TatI WGTACW 2 cut(s) 100, 234
Tru1I TTAA 2 cut(s) 135, 174
Tru9I TTAA 2 cut(s) 135, 174
TscAI CASTG 3 cut(s) 43, 67, 214
TspDTI ATGAA 3 cut(s) 68, 164, 254
TspRI CASTG 3 cut(s) 43, 67, 214
Vha464I CTTAAG 1 cut(s) 173
VneI GTGCAC 1 cut(s) 34
XceI RCATGY 1 cut(s) 107
XmnI GAANNNNTTC 1 cut(s) 75
Zsp2I ATGCAT 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.