Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000533.1

Orthogroup ID

OG0020558

Physical Location & Seq

Genomic Coordinates Forward (+)

270125 .. 273178

Gene Structure 3054 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3054 bp

atgtctgattctgaaagcatgcatgatcccagcagttggcttattagcaaaaagaaaagcaaatggcgttctgcttttttcaccgtctactgctctagagccttcctctctttattaaaaccttccttgctcaaaatcacagaaaccaaatccctgtctggttctctctctcctgtcaataccactgccgattcagatccaaacctcgatgacttcggtgttgaccaaacagctcttactcaacttgtgaagaacaaaaatctctaccagctgcaagagttgggaggagttgagggagtaatatcccacctcaaatctgatgcagtgagtggaattcctagtgttgatgctgaggacattctcaaaagaatcaaagcatttggttctaacgtttatcaaaaagcaccaacaagaaggtttttccattttgtgtgggaagccttcaaagacctaaccattctcattctattaggctgtgcagcgctctctcttaattttggcatcaaagagcatggatttagagaaggttggattgatggtgggagcatattgcttgcagtcattttgtccatttctgtgtcagcaatcggcccttacttgcagagcaaacattttgtccacaagaatatccaaattgaggctgtgagaggtggcaagaagcaaaagatttccctttctgaagctgtcgttggtgatgtaattatcttgaactgcggagatcaggtgccggctgatgggttacttgtagaaggctattcactgcaagtagaccaatcaagcatgtcaggacaaagtgatgatattgttgaaattagccatgaccagaatccattcctgttttctgggacaaagattacacatgggtatgctcgaatgattgtcatatccgtcggaatgaacacaaaacggggtgaaatgactggccaaatcagccaagacactagtgagaagacactactgcaagcacgtctggagaagctaacttcactgataggtaaagtcggtctggtggttgctttcgctgttcttgtagtgttgttagttcgatacttcacagggcatacggaggatgagaatggagacaaagagttcaataacagcattgaagttgatgacatgataagtgctgtaactgggattataatggctgccgtttcaattgtggtcgtggcaattccagaaggtctgccattagcactaactcttactgtggcctattctatgaagaaaatgatggctgacaaagcaacggttctgaggctctctgctgctgagaatatggcatttaccaccacaatctgtactgacaaaacaggtactctcacaatgaaccagatgaaggtgaccaagttttggataggtgaaaatagtttggaacaagaagcctattcatcaaaaatttctcattctgttcttaatttgatccaagaaggggttgctttgaatacaagtggtagtgtgtacaagcgtagcctggattcagaaattgagatctcaggcagtccaactgaaaaggctattctatggtgggcagtatatgggtcacagatggatgcggagaaagtaacgaagagttgtagcgttctccaatttgaggccttcaactcacaaaacaagcgaagtggggttttgataaagaggaaggaagacagcacaattcatgtacattggaaaggagctgcagagatcatactaggaatgtgctctagttactacgaaccctctggagtcgtcaaacacatggatgataatgaaaaagggaaatttcagcagattattcaaggcatggcagctagcagactccgatgcattgcatttgcacataaagaaattccagcagatcaatatcgactggacctaaaacaaaaaattatgctacaagatggatttaccctgttgggactcataggccttaaagatctgtgccgtcctggagtgtggaaagcagttaaagattgtcaaaacgccggggtgaacatcaaaatgatcacaggggataatgttttcactgcacaagccattgccacagaatgtgggatactcaagcctggtcaggacatcttcagtggagcagtgatagaaggtgcggtttttcaaagctactctgacgaggataaactgttgaatgtggacaatatctgtgtaatggcaaggtcctctgctcttgataagcttacaatggtgcaatacttgaagaagaaacggcatgtagttgcagtgaccggtgatggcgctagtgatgcacctgcattaaaagaagctgatataggactatctttgggaattaaagggacacaagttgccaaagaaagctcagatatcataatcatcgatgataacttcgcttcggtggtgaatgttttggcatgtggaagatgtgtttatcacaatactcagaagctcattcaattccagctcacagcaaattttactggtcttgtaatcaactttgcagcagcagcttcatcaagagcagtcccatttacagttgttcgttcaatttggttgaacttgattatggacacactgctagctctggctctttccaaggacaaacccacaaaagagctcatggagaagccgccggtgggcagaactaatcccctcatcaccaacatcatgtggaggaacctctcgggtcatgctctgtaccagacgatagtccttttggtattacaattcaagggcaaagcaatccttggtgtggatgataaggtactgggtaccttggtatttaacacttatcttctttgccaggtgttcaatgagtttaatgcaaggaagcttgagaagaaggatatctttaggggtttacacacagacaaattgttcatgggggtcattacggtggcaattgttctacaggtggtgacgctggaacttttgagcaaatatttggatatagggaggttgaactgcggacaatggggactatgtcttggaattgcagccatgtcttggccgatcggatgggttgttaagtgtatacccgtgccacagaaacccattctccgctacctgctcgagttgaagttggaaagcaaacaagaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1017

Amino Acids

111.51

Weight (kDa)

8.11

Isoelectric Point (pI)

32.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	94 - 163	5.4e-13	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	213 - 309	2.2e-17	P-type ATPase actuator domain
Cation_ATPase	PF13246	473 - 644	7.4e-25	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	624 - 755	7.1e-10	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	826 - 995	2.9e-36	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0020558)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0038931
rosa_laevigata	RLG00000033881
rosa_multiflora	Rmu_sc0000533.1_g000080
rosa_rugosa	Rorug05G0175300
rosa_samantha	Rh5BG266800
rosa_wichuraiana	Rw5G024460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1142
AarI	CACCTGC	1 cut(s)	2254
Acc36I	ACCTGC	2 cut(s)	2254, 3027
Acc65I	GGTACC	1 cut(s)	2723
AccB1I	GGYRCC	2 cut(s)	724, 2723
AccB7I	CCANNNNNTGG	3 cut(s)	36, 1353, 2958
AccI	GTMKAC	3 cut(s)	87, 768, 2986
AciI	CCGC	6 cut(s)	714, 1556, 2087, 2582, 2919, 3013
AclI	AACGTT	1 cut(s)	390
AclWI	GGATC	3 cut(s)	20, 191, 1417
AcoI	YGGCCR	2 cut(s)	922, 2960
AcsI	RAATTY	5 cut(s)	333, 1398, 1763, 1830, 2425
AcuI	CTGAAG	2 cut(s)	699, 2047
AfaI	GTAC	7 cut(s)	1303, 1318, 1463, 1665, 2651, 2718, 2725
AfeI	AGCGCT	1 cut(s)	483
AgeI	ACCGGT	1 cut(s)	2222
AhlI	ACTAGT	1 cut(s)	941
AjiI	CACGTC	1 cut(s)	968
AjnI	CCWGG	4 cut(s)	1473, 1930, 2047, 2754
AjuI	GAANNNNNNNTTGG	2 cut(s)	672, 704
Alw21I	GWGCWC	2 cut(s)	1706, 2571
Alw26I	GTCTC	1 cut(s)	1074
AlwI	GGATC	3 cut(s)	20, 191, 1417
Ama87I	CYCGRG	2 cut(s)	2635, 3023
Aor51HI	AGCGCT	1 cut(s)	483
AoxI	GGCC	6 cut(s)	589, 922, 1212, 1596, 1909, 2960
ApoI	RAATTY	5 cut(s)	333, 1398, 1763, 1830, 2425
ArsI	GACNNNNNNTTYG	2 cut(s)	600, 632
AsiGI	ACCGGT	1 cut(s)	2222
Asp700I	GAANNNNTTC	1 cut(s)	830
Asp718I	GGTACC	1 cut(s)	2723
AspLEI	GCGC	2 cut(s)	484, 2234
AspS9I	GGNCC	3 cut(s)	590, 1855, 2154
AsuC2I	CCSGG	1 cut(s)	1969
AsuNHI	GCTAGC	2 cut(s)	1793, 2530
AvaI	CYCGRG	2 cut(s)	2635, 3023
AvaII	GGWCC	2 cut(s)	1855, 2154
BaeI	ACNNNNGTAYC	2 cut(s)	2715, 2748
BalI	TGGCCA	1 cut(s)	924
BanI	GGYRCC	2 cut(s)	724, 2723
BanII	GRGCYC	1 cut(s)	2571
BbsI	GAAGAC	2 cut(s)	956, 1653
Bbv12I	GWGCWC	2 cut(s)	1706, 2571
BbvCI	CCTCAGC	1 cut(s)	351
BccI	CCATC	7 cut(s)	530, 728, 1228, 1543, 1877, 2222, 2964
BceAI	ACGGC	3 cut(s)	1136, 1911, 2219
BciT130I	CCWGG	4 cut(s)	1475, 1932, 2049, 2756
BciVI	GTATCC	1 cut(s)	2031
BclI	TGATCA	1 cut(s)	1986
BcnI	CCSGG	1 cut(s)	1969
BcoDI	GTCTC	1 cut(s)	1074
BcuI	ACTAGT	1 cut(s)	941
BfaI	CTAG	8 cut(s)	96, 339, 942, 1694, 1707, 1794, 2235, 2531
BfmI	CTRYAG	2 cut(s)	1680, 2861
BfoI	RGCGCY	2 cut(s)	485, 2235
BfuAI	ACCTGC	2 cut(s)	2254, 3027
BfuI	GTATCC	1 cut(s)	2031
BglII	AGATCT	2 cut(s)	1491, 1918
Bme1390I	CCNGG	5 cut(s)	1475, 1932, 1969, 2049, 2756
Bme18I	GGWCC	2 cut(s)	1855, 2154
BmeT110I	CYCGRG	2 cut(s)	2635, 3023
BmgBI	CACGTC	1 cut(s)	968
BmgT120I	GGNCC	3 cut(s)	590, 1855, 2154
BmiI	GGNNCC	3 cut(s)	726, 2630, 2725
BmrFI	CCNGG	5 cut(s)	1475, 1932, 1969, 2049, 2756
BmrI	ACTGGG	2 cut(s)	1143, 2729
BmsI	GCATC	6 cut(s)	310, 337, 510, 1543, 1796, 2230
BmtI	GCTAGC	2 cut(s)	1797, 2534
BmuI	ACTGGG	2 cut(s)	1143, 2729
BoxI	GACNNNNGTC	1 cut(s)	2660
BpiI	GAAGAC	2 cut(s)	956, 1653
BplI	GAGNNNNNCTC	2 cut(s)	90, 122
BpmI	CTGGAG	3 cut(s)	992, 1746, 1953
Bpu10I	CCTNAGC	1 cut(s)	351
BpuEI	CTTGAG	2 cut(s)	2027, 2807
BpuMI	CCSGG	1 cut(s)	1969
Bsa29I	ATCGAT	1 cut(s)	2331
BsaBI	GATNNNNATC	2 cut(s)	195, 1845
BsaJI	CCNNGG	4 cut(s)	1968, 2547, 2698, 2727
BsaWI	WCCGGW	1 cut(s)	2222
BsaXI	ACNNNNNCTCC	4 cut(s)	708, 738, 2994, 3024
Bse118I	RCCGGY	3 cut(s)	727, 2222, 2584
Bse1I	ACTGG	5 cut(s)	925, 1138, 1857, 2437, 2724
Bse3DI	GCAATG	2 cut(s)	1809, 2019
Bse8I	GATNNNNATC	2 cut(s)	195, 1845
BseBI	CCWGG	4 cut(s)	1475, 1932, 2049, 2756
BseCI	ATCGAT	1 cut(s)	2331
BseDI	CCNNGG	4 cut(s)	1968, 2547, 2698, 2727
BseGI	GGATG	5 cut(s)	1075, 1558, 1750, 2713, 2975
BseJI	GATNNNNATC	2 cut(s)	195, 1845
BseMI	GCAATG	2 cut(s)	1809, 2019
BseMII	CTCAG	6 cut(s)	342, 1247, 1263, 1509, 2328, 2408
BseNI	ACTGG	5 cut(s)	925, 1138, 1857, 2437, 2724
BseRI	GAGGAG	1 cut(s)	300
BseYI	CCCAGC	1 cut(s)	29
BsgI	GTGCAG	2 cut(s)	498, 1995
Bsh1285I	CGRYCG	1 cut(s)	2967
BshFI	GGCC	6 cut(s)	591, 924, 1214, 1598, 1911, 2962
BshNI	GGYRCC	2 cut(s)	724, 2723
BshTI	ACCGGT	1 cut(s)	2222
BshVI	ATCGAT	1 cut(s)	2331
BsiEI	CGRYCG	1 cut(s)	2967
BsiHKAI	GWGCWC	2 cut(s)	1706, 2571
BsiHKCI	CYCGRG	2 cut(s)	2635, 3023
BsiSI	CCGG	4 cut(s)	728, 1968, 2223, 2585
BslFI	GGGAC	5 cut(s)	859, 1914, 2305, 2462, 2943
BsmAI	GTCTC	1 cut(s)	1074
BsmFI	GGGAC	5 cut(s)	859, 1914, 2305, 2462, 2943
BsnI	GGCC	6 cut(s)	591, 924, 1214, 1598, 1911, 2962
BsoBI	CYCGRG	2 cut(s)	2635, 3023
Bsp1286I	GDGCHC	2 cut(s)	1706, 2571
Bsp1407I	TGTACA	2 cut(s)	1461, 1663
BspACI	CCGC	6 cut(s)	714, 1556, 2087, 2582, 2919, 3013
BspANI	GGCC	6 cut(s)	591, 924, 1214, 1598, 1911, 2962
BspCNI	CTCAG	6 cut(s)	343, 1248, 1264, 1508, 2327, 2407
BspDI	ATCGAT	1 cut(s)	2331
BspLI	GGNNCC	3 cut(s)	726, 2630, 2725
BspMAI	CTGCAG	1 cut(s)	1684
BspMI	ACCTGC	2 cut(s)	2254, 3027
BspOI	GCTAGC	2 cut(s)	1797, 2534
BspPI	GGATC	3 cut(s)	20, 191, 1417
BspT107I	GGYRCC	2 cut(s)	724, 2723
BsrDI	GCAATG	2 cut(s)	1809, 2019
BsrFI	RCCGGY	3 cut(s)	727, 2222, 2584
BsrGI	TGTACA	2 cut(s)	1461, 1663
BsrI	ACTGG	5 cut(s)	925, 1138, 1857, 2437, 2724
BssAI	RCCGGY	3 cut(s)	727, 2222, 2584
BssECI	CCNNGG	4 cut(s)	1968, 2547, 2698, 2727
BssNAI	GTATAC	1 cut(s)	2987
BssT1I	CCWWGG	3 cut(s)	2547, 2698, 2727
Bst1107I	GTATAC	1 cut(s)	2987
Bst2UI	CCWGG	4 cut(s)	1475, 1932, 2049, 2756
Bst4CI	ACNGT	6 cut(s)	85, 1210, 1252, 2121, 2488, 2848
Bst6I	CTCTTC	1 cut(s)	1565
BstAUI	TGTACA	2 cut(s)	1461, 1663
BstC8I	GCNNGC	6 cut(s)	20, 555, 729, 963, 1795, 2532
BstDEI	CTNAG	6 cut(s)	351, 1256, 1272, 1495, 2314, 2394
BstEII	GGTNACC	1 cut(s)	1342
BstF5I	GGATG	5 cut(s)	1075, 1558, 1750, 2713, 2975
BstH2I	RGCGCY	2 cut(s)	485, 2235
BstHHI	GCGC	2 cut(s)	484, 2234
BstMAI	GTCTC	1 cut(s)	1074
BstMCI	CGRYCG	1 cut(s)	2967
BstMWI	GCNNNNNNNGC	4 cut(s)	930, 1244, 2240, 2459
BstNI	CCWGG	4 cut(s)	1475, 1932, 2049, 2756
BstNSI	RCATGY	4 cut(s)	22, 784, 2210, 2370
BstPAI	GACNNNNGTC	1 cut(s)	2660
BstPI	GGTNACC	1 cut(s)	1342
BstSCI	CCNGG	5 cut(s)	1473, 1930, 1967, 2047, 2754
BstSFI	CTRYAG	2 cut(s)	1680, 2861
BstV2I	GAAGAC	2 cut(s)	956, 1653
BstX2I	RGATCY	3 cut(s)	196, 1491, 1918
BstYI	RGATCY	3 cut(s)	196, 1491, 1918
BstZ17I	GTATAC	1 cut(s)	2987
Bsu15I	ATCGAT	1 cut(s)	2331
BsuI	GTATCC	1 cut(s)	2031
BsuRI	GGCC	6 cut(s)	591, 924, 1214, 1598, 1911, 2962
BsuTUI	ATCGAT	1 cut(s)	2331
BtrI	CACGTC	1 cut(s)	968
BtsCI	GGATG	5 cut(s)	1075, 1558, 1750, 2713, 2975
BtsI	GCAGTG	7 cut(s)	183, 330, 758, 2007, 2079, 2223, 2525
BtsIMutI	CAGTG	9 cut(s)	183, 330, 758, 986, 2007, 2071, 2079, 2223, 2525
BveI	ACCTGC	2 cut(s)	2254, 3027
Cac8I	GCNNGC	6 cut(s)	20, 555, 729, 963, 1795, 2532
CfoI	GCGC	2 cut(s)	484, 2234
Cfr10I	RCCGGY	3 cut(s)	727, 2222, 2584
Cfr13I	GGNCC	3 cut(s)	590, 1855, 2154
ClaI	ATCGAT	1 cut(s)	2331
CseI	GACGC	1 cut(s)	2881
Csp6I	GTAC	7 cut(s)	1302, 1317, 1462, 1664, 2650, 2717, 2724
CspAI	ACCGGT	1 cut(s)	2222
CspCI	CAANNNNNGTGG	2 cut(s)	1603, 1638
CviQI	GTAC	7 cut(s)	1302, 1317, 1462, 1664, 2650, 2717, 2724
DdeI	CTNAG	6 cut(s)	351, 1256, 1272, 1495, 2314, 2394
EaeI	YGGCCR	2 cut(s)	922, 2960
Eam1104I	CTCTTC	1 cut(s)	1565
EarI	CTCTTC	1 cut(s)	1565
Ecl136II	GAGCTC	1 cut(s)	2569
Eco130I	CCWWGG	3 cut(s)	2547, 2698, 2727
Eco147I	AGGCCT	2 cut(s)	1598, 1911
Eco24I	GRGCYC	1 cut(s)	2571
Eco32I	GATATC	2 cut(s)	2320, 2800
Eco47I	GGWCC	2 cut(s)	1855, 2154
Eco47III	AGCGCT	1 cut(s)	483
Eco53kI	GAGCTC	1 cut(s)	2569
Eco57I	CTGAAG	2 cut(s)	699, 2047
Eco88I	CYCGRG	2 cut(s)	2635, 3023
Eco91I	GGTNACC	1 cut(s)	1342
EcoICRI	GAGCTC	1 cut(s)	2569
EcoO109I	RGGNCCY	1 cut(s)	2154
EcoO65I	GGTNACC	1 cut(s)	1342
EcoRI	GAATTC	1 cut(s)	333
EcoRII	CCWGG	4 cut(s)	1473, 1930, 2047, 2754
EcoRV	GATATC	2 cut(s)	2320, 2800
EcoT14I	CCWWGG	3 cut(s)	2547, 2698, 2727
EcoT22I	ATGCAT	2 cut(s)	24, 1811
EcoT38I	GRGCYC	1 cut(s)	2571
ErhI	CCWWGG	3 cut(s)	2547, 2698, 2727
FalI	AAGNNNNNCTT	4 cut(s)	2682, 2714, 2786, 2818
FaqI	GGGAC	5 cut(s)	859, 1914, 2305, 2462, 2943
FbaI	TGATCA	1 cut(s)	1986
FblI	GTMKAC	3 cut(s)	87, 768, 2986
FokI	GGATG	5 cut(s)	1082, 1565, 1757, 2720, 2982
FriOI	GRGCYC	1 cut(s)	2571
FspBI	CTAG	8 cut(s)	96, 339, 942, 1694, 1707, 1794, 2235, 2531
GlaI	GCGC	2 cut(s)	483, 2233
GsaI	CCCAGC	1 cut(s)	33
GsuI	CTGGAG	3 cut(s)	992, 1746, 1953
HaeII	RGCGCY	2 cut(s)	485, 2235
HaeIII	GGCC	6 cut(s)	591, 924, 1214, 1598, 1911, 2962
HapII	CCGG	4 cut(s)	728, 1968, 2223, 2585
HgaI	GACGC	1 cut(s)	2881
HhaI	GCGC	2 cut(s)	484, 2234
Hin6I	GCGC	2 cut(s)	482, 2232
HinP1I	GCGC	2 cut(s)	482, 2232
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HindIII	AAGCTT	2 cut(s)	2171, 2783
HinfI	GANTC	8 cut(s)	8, 191, 369, 826, 1478, 1728, 1800, 1902
HpaII	CCGG	4 cut(s)	728, 1968, 2223, 2585
Hpy166II	GTNNAC	9 cut(s)	88, 223, 619, 769, 1462, 1975, 2131, 2813, 2987
Hpy188III	TCNNGA	9 cut(s)	96, 706, 786, 971, 1178, 1725, 2054, 2165, 2469
Hpy8I	GTNNAC	9 cut(s)	88, 223, 619, 769, 1462, 1975, 2131, 2813, 2987
Hpy99I	CGWCG	1 cut(s)	893
HpyCH4III	ACNGT	6 cut(s)	85, 1210, 1252, 2121, 2488, 2848
HpyCH4IV	ACGT	2 cut(s)	390, 967
HpyF10VI	GCNNNNNNNGC	4 cut(s)	930, 1244, 2240, 2459
HpyF3I	CTNAG	6 cut(s)	351, 1256, 1272, 1495, 2314, 2394
HpySE526I	ACGT	2 cut(s)	390, 967
HspAI	GCGC	2 cut(s)	482, 2232
KpnI	GGTACC	1 cut(s)	2727
KroI	GCCGGC	1 cut(s)	727
KroNI	GCCGGC	1 cut(s)	729
Ksp22I	TGATCA	1 cut(s)	1986
LmnI	GCTCC	3 cut(s)	543, 1676, 2069
LweI	GCATC	6 cut(s)	310, 337, 510, 1543, 1796, 2230
MaeI	CTAG	8 cut(s)	96, 339, 942, 1694, 1707, 1794, 2235, 2531
MaeII	ACGT	2 cut(s)	390, 967
MaeIII	GTNAC	8 cut(s)	738, 1129, 1342, 1542, 1564, 1709, 2218, 2869
MfeI	CAATTG	2 cut(s)	1158, 2853
MflI	RGATCY	3 cut(s)	196, 1491, 1918
MhlI	GDGCHC	2 cut(s)	1706, 2571
MlsI	TGGCCA	1 cut(s)	924
MluNI	TGGCCA	1 cut(s)	924
MlyI	GAGTC	3 cut(s)	1737, 1794, 1896
MmeI	TCCRAC	4 cut(s)	509, 871, 1529, 3015
Mox20I	TGGCCA	1 cut(s)	924
Mph1103I	ATGCAT	2 cut(s)	24, 1811
MroNI	GCCGGC	1 cut(s)	727
MroXI	GAANNNNTTC	1 cut(s)	830
MscI	TGGCCA	1 cut(s)	924
MslI	CAYNNNNRTG	5 cut(s)	575, 864, 1743, 1982, 2846
Msp20I	TGGCCA	1 cut(s)	924
MspA1I	CMGCKG	1 cut(s)	271
MspI	CCGG	4 cut(s)	728, 1968, 2223, 2585
MspR9I	CCNGG	5 cut(s)	1475, 1932, 1969, 2049, 2756
MunI	CAATTG	2 cut(s)	1158, 2853
MvaI	CCWGG	4 cut(s)	1475, 1932, 2049, 2756
MwoI	GCNNNNNNNGC	4 cut(s)	930, 1244, 2240, 2459
NaeI	GCCGGC	1 cut(s)	729
NciI	CCSGG	1 cut(s)	1969
NgoMIV	GCCGGC	1 cut(s)	727
NheI	GCTAGC	2 cut(s)	1793, 2530
NlaIV	GGNNCC	3 cut(s)	726, 2630, 2725
NmuCI	GTSAC	4 cut(s)	1342, 1542, 2218, 2869
NsiI	ATGCAT	2 cut(s)	24, 1811
NspI	RCATGY	4 cut(s)	22, 784, 2210, 2370
PaeI	GCATGC	1 cut(s)	22
PaeR7I	CTCGAG	1 cut(s)	3023
PaqCI	CACCTGC	1 cut(s)	2254
PceI	AGGCCT	2 cut(s)	1598, 1911
PdiI	GCCGGC	1 cut(s)	729
PdmI	GAANNNNTTC	1 cut(s)	830
PfeI	GAWTC	5 cut(s)	8, 191, 369, 826, 1478
PflFI	GACNNNGTC	1 cut(s)	2934
PflMI	CCANNNNNTGG	3 cut(s)	36, 1353, 2958
PfoI	TCCNGGA	1 cut(s)	1930
PinAI	ACCGGT	1 cut(s)	2222
Ple19I	CGATCG	1 cut(s)	2967
PleI	GAGTC	3 cut(s)	1736, 1794, 1896
PpsI	GAGTC	3 cut(s)	1736, 1794, 1896
PpuMI	RGGWCCY	1 cut(s)	2154
PshAI	GACNNNNGTC	1 cut(s)	2660
PsiI	TTATAA	1 cut(s)	1142
Psp124BI	GAGCTC	1 cut(s)	2571
Psp1406I	AACGTT	1 cut(s)	390
Psp5II	RGGWCCY	1 cut(s)	2154
Psp6I	CCWGG	4 cut(s)	1473, 1930, 2047, 2754
PspEI	GGTNACC	1 cut(s)	1342
PspFI	CCCAGC	1 cut(s)	29
PspGI	CCWGG	4 cut(s)	1473, 1930, 2047, 2754
PspN4I	GGNNCC	3 cut(s)	726, 2630, 2725
PspPI	GGNCC	3 cut(s)	590, 1855, 2154
PspPPI	RGGWCCY	1 cut(s)	2154
PspXI	VCTCGAGB	1 cut(s)	3023
PstI	CTGCAG	1 cut(s)	1684
PsuI	RGATCY	3 cut(s)	196, 1491, 1918
PsyI	GACNNNGTC	1 cut(s)	2934
PvuI	CGATCG	1 cut(s)	2967
PvuII	CAGCTG	1 cut(s)	271
RsaI	GTAC	7 cut(s)	1303, 1318, 1463, 1665, 2651, 2718, 2725
RsaNI	GTAC	7 cut(s)	1302, 1317, 1462, 1664, 2650, 2717, 2724
RseI	CAYNNNNRTG	5 cut(s)	575, 864, 1743, 1982, 2846
SacI	GAGCTC	1 cut(s)	2571
Sau96I	GGNCC	3 cut(s)	590, 1855, 2154
SchI	GAGTC	3 cut(s)	1737, 1794, 1896
ScrFI	CCNGG	5 cut(s)	1475, 1932, 1969, 2049, 2756
SduI	GDGCHC	2 cut(s)	1706, 2571
SfaNI	GCATC	6 cut(s)	310, 337, 510, 1543, 1796, 2230
SfcI	CTRYAG	2 cut(s)	1680, 2861
Sfr274I	CTCGAG	1 cut(s)	3023
SgrAI	CRCCGGYG	1 cut(s)	2584
SinI	GGWCC	2 cut(s)	1855, 2154
SlaI	CTCGAG	1 cut(s)	3023
SmiMI	CAYNNNNRTG	5 cut(s)	575, 864, 1743, 1982, 2846
SmlI	CTYRAG	3 cut(s)	2042, 2786, 3023
SmoI	CTYRAG	3 cut(s)	2042, 2786, 3023
SpeI	ACTAGT	1 cut(s)	941
SphI	GCATGC	1 cut(s)	22
SseBI	AGGCCT	2 cut(s)	1598, 1911
SsiI	CCGC	6 cut(s)	714, 1556, 2087, 2582, 2919, 3013
SspI	AATATT	1 cut(s)	2894
SspMI	CTAG	8 cut(s)	96, 339, 942, 1694, 1707, 1794, 2235, 2531
SstI	GAGCTC	1 cut(s)	2571
StuI	AGGCCT	2 cut(s)	1598, 1911
StyD4I	CCNGG	5 cut(s)	1473, 1930, 1967, 2047, 2754
StyI	CCWWGG	3 cut(s)	2547, 2698, 2727
TaaI	ACNGT	6 cut(s)	85, 1210, 1252, 2121, 2488, 2848
TaiI	ACGT	2 cut(s)	393, 970
TaqI	TCGA	6 cut(s)	207, 871, 1045, 1849, 2331, 3024
TaqII	GACCGA	1 cut(s)	992
TatI	WGTACW	3 cut(s)	1301, 1461, 1663
TauI	GCSGC	1 cut(s)	2584
TfiI	GAWTC	5 cut(s)	8, 191, 369, 826, 1478
TscAI	CASTG	9 cut(s)	190, 330, 765, 993, 2014, 2071, 2079, 2223, 2532
TseFI	GTSAC	4 cut(s)	1342, 1542, 2218, 2869
Tsp45I	GTSAC	4 cut(s)	1342, 1542, 2218, 2869
TspDTI	ATGAA	9 cut(s)	911, 1238, 1343, 1352, 1380, 1649, 1767, 2454, 2821
TspGWI	ACGGA	2 cut(s)	877, 1079
TspRI	CASTG	9 cut(s)	190, 330, 765, 993, 2014, 2071, 2079, 2223, 2532
Tth111I	GACNNNGTC	1 cut(s)	2934
Van91I	CCANNNNNTGG	3 cut(s)	36, 1353, 2958
VpaK11BI	GGWCC	2 cut(s)	1855, 2154
XapI	RAATTY	5 cut(s)	333, 1398, 1763, 1830, 2425
XbaI	TCTAGA	1 cut(s)	95
XceI	RCATGY	4 cut(s)	22, 784, 2210, 2370
XhoI	CTCGAG	1 cut(s)	3023
XmiI	GTMKAC	3 cut(s)	87, 768, 2986
XmnI	GAANNNNTTC	1 cut(s)	830
XspI	CTAG	8 cut(s)	96, 339, 942, 1694, 1707, 1794, 2235, 2531
Zsp2I	ATGCAT	2 cut(s)	24, 1811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.