Rorug05G0175300

calcium-transporting ATPase 13, plasma

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
16298561 .. 16311577
13017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0175300.1

Sequence Viewer

Length: 3657 bp
ATGGAACCTGGAAGGGAGGAATTCCACCCTGCATCCCAGCAATATATGCCGAACTCTCTGAGCAGCATGCATTCTGATATGAGGTCCCATAACCTTAATACTTCAGATATTAAACCTGTACATAATTATTCAATAACAGGTGAGGAGTTTTCTCTTGAATTTATGCTTGATCGAGTGAACCCCAGGAAGCCTTTGCATCCAAATGCTGTGGGTGATCCAAGTTATGTTGAACTAAAAGGAATGTTAGGAATCAGTCACGGAGGTTTTGAAAGTGGTTCAGATGCTTCAATGGTTGCTATATCTGAAAGAGGTCCAAACCAGTTTGAGAGAAACAGCTCATATTTACATGATGACAGAAATAACTATGGATCAGTTCAATCGGTACCACGAGCTTCTTCAGGCTATGGAACTAGTCGTGTTCATGGATATGCCTCCTCTGGAGCCTCTGATAGCTCATCAATGAGAATGAAGGTTCTTTGTAGCTTTGGTGGTAAAATTTTACCCCGACCAAGTGATGGGAAACTCAGGTATGTTGGAGGTGATACACGCATTATCCGTATTAGAAAGGACATTACCTGGCAGGAGCTTATACATAAAGCCTTATCAATTTATAACCAATTGCATATAATTAAATATCAGCTTCCAGGAGAGGAGCTTGATGCCTTGGTTTCTGTATCTTGTGATGAGGATCTGCAGAATATGATGGAGGAATGGAACGAACTAGAAGATAAAGAGGGGCCGCAGAAGCTTAGAATGTTTTTTTTCTCCAGCAGTGATTTGGAGGATCAGTTTGGTCTGCACAGTGTGGATGGTGACTCTGAGGTTCAGTATGTAGTTGCTGTCAATGGCATGGACCTGGGATCAAGAAAAAACTCGAGCCTACATGGTTTGACAAGCTCAGCAGCTAATCATTTAGATGAGACAAATAGACACAATATTCAGAAGGGAACAAGTCATGTTGCGAAAGACTCAATAGGGATAGGTGCTCCAGTTTTGACTGGTAAAATCATTTCAGCGACAACTGTTCAATCTTCTGAACCTATGCTGCCAAGCTCTTCAAATGCCTATGAAGCTTATCCTCATTTTCAACATGGACAGGTTATGCATTATGGACAAAATGTGCAGTACCCATTGCACAATGGCCATGCCTTTCCAAGTCAATCCCATTTTGGAGACGCTCCTATTTCAGTGCCTCATCCTGGTATTATGAATCAAGGAGGAGGTTCAATTGAAGGGCCGACCAGTGGCTTGAGAGAGCGTAGTTTCGAGATGCCAGTGAAGGAGGTACAACCATTACGTGATGGTTCAGTCCAGCAAGAGAGTGACCCTGAAAAACTTCGCCCCTCAAGGAAAGAGCAATCTGTCCCCAAACCGCTGTATGATGGTAATTTGATGAACTACCCTCCTGTTGAAGAAGCATCAAAAGATGAAAGAAAGTACCAGGAACCTGAAAATGTTGCTTCATCAATTGATTCCGGGAAGTCTATGCTGGTTCACAATCCTAGTGAAGTTGATCATCAGTCCACATCTAACAATGCATTTGCTCCTACTTATGCGGACCCAATGTCCAATGGAATTGATTTGGGGTACCTTGAGCCACCTGTGCAGCCTCAGAGAATCTACTACTCGGAAAGAATTCCCAGGGAGCAGGCAGAGTTGCTGAATCGATCGTCAAAATCTGATGATTCGCATGGTGCTCAGTTTCTCGTATCTCATTCACGCTCTGATATCATTCACCAGGATCCAATTACAGGAGTTAAGAAATTGCATGATCATGCAAACCTTCCTCCCAGGTCTGAACAACAATCCTCCTCAACTGTAAATGTGGATGCTCAAACTGTTGATGATGGACTTGCTCAACTGCAGAAGTACAAAGAGTTTGCTGATTCAATTTGTGAGATGAATGCTAAGCTTTTGCAAGATGCAGATGGTGAATTAAAGCCAGCATTGCCTAACTCTGTGGATAGTAAAGAGATCGCGAACAGGGATAAGATCCTTAAATCTGACCAAGAAACAAACTGCCTCAAAGGTAGCCATAAGAAACTTGTGGTTGATGACATTGCAGAAGCTATATCAGAGTATCCGGCTGTAAGTCAGATACCTTCTGTGAAGCACCATGAGGTTTCTGCATCTAATCATTCAGAGCTTAATCAGGCCGAGGCCACTGGCAAGGATCCAAATACTGCTGACAATATGGGCCGTGCACAAGTTGGTATATCTACTCCAGTGCAGGGAGACATAATTATTGATATCGAAGAACGATTTCCTCGTGATTTCCTGTCTGATATTTTCTCCAAGGCAATACTTTCTGAAGGCTCCCCTGATGTTGGTTTACTGCAGAAGGATGGAGCTGGTTTGAGCTTAAATATGGAAAATCTTGATCCTAAGCGCTGGTCATATTTCCAAAAGTTGGCTCAAGAAGGGGCTGATCAACAAGATGTTTCTCTTATGGACCAGGATCTTGGTTTTCCTTCTGCAATTAGAAATGTTGAAGAAGAAGATAGTAAATCTTATCATCGTACACCTTTACCAACAGATGGAGTTCCAATGGCCCATATGAATTCTCAGCCTAATTTTGGAGAAGATATTAGCAAAGAAACTGGACTGACTAAAGCTAATTATGATCATCCGCAACTGAAGGAAACTGAAAGTATGCAGTTTGAGGCCATGATGGAAAACTTACGAGTGCCAGAATCAGATTATGAGGAAGGAAAGTTTGCAAGTAGAACCGCTGGTTTACCTCCTTTAAATCCTTCACTGGGAGAATTTGATATCAGTACCTTGCAGTTGATAAAGAATGAAGATCTAGAACAGATGAAAGAACTGGGTTCTGGCACCTTTGGGACTGTGTATCATGGAAAATGGAGGGGGAGTGATGTTGCCATTAAGAGACTAAATAAGAGCTGCTTCACTGGGAGATCATCAGAGCAAGAGAGACTGTCTATAGAGTTCTGGCGGGAAGCTGACATTCTTTCAAAGCTACACCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAAGATGGGCCAGGGGGAACACTAGCTACCGTAACTGAGTACATGGTTGATGGTTCTCTTAGGCATGTCTTACTTCGAAAAGATAGGTATCTTGATCGTCGCAAGCGATTAATAATTGCCATGGATGCAGCATTTGGAATGGAATATTTGCACTCAAAGAATATTGTTCATTTTGACCTGAAGTGTGACAACTTACTTGTGAACCTAAAAGATCCTCAACGGCCAATTTGCAAGGTCGGTGATTTTGGCCTTTCAAAAATTAAGCGAAATACTCTGGTTTCTGGTGGTGTACGTGGAACGTTACCATGGATGGCTCCAGAGTTGCTGAATGGAAGCAGCACTAAGGTCTCCGAAAAGGTGGATATTTTCTCCTTTGGTATTGTCTTATGGGAGATTCTTACTGGAGAGGAGCCGTATGCCAACATGCACTATGGAGCAATTATAGGCGGTATTGTGAACAACACATTGAGACCCACCATTCCAAGTTACTGTGATCCAGAATGGAGAACGCTTATGGAGCAGTGTTGGGCTCCTAATCCTGCTGCCAGGCCATCGTTCACAGAAATTGCTAGTTGCTTACGAGTTATGACAACAGCAGCTAGCCAAACCAAAGCACAGGGTCACAAGGCATCTAAATGA

Protein Analysis

1218

Amino Acids

134.92

Weight (kDa)

5.45

Isoelectric Point (pI)

48.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 172 - 254 2.3e-17 PB1 domain
PK_Tyr_Ser-Thr PF07714 937 - 1199 1.3e-62 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 937 - 1196 2e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020558)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0038931
rosa_laevigata RLG00000033881
rosa_multiflora Rmu_sc0000533.1_g000080
rosa_rugosa Rorug05G0175300
rosa_samantha Rh5BG266800
rosa_wichuraiana Rw5G024460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 612
Acc65I GGTACC 2 cut(s) 382, 1587
AccB1I GGYRCC 3 cut(s) 382, 1587, 2834
AccB7I CCANNNNNTGG 3 cut(s) 515, 2410, 2537
AccII CGCG 1 cut(s) 1979
AciI CCGC 7 cut(s) 740, 1373, 1556, 2630, 2730, 2956, 3465
AclI AACGTT 1 cut(s) 3317
AcoI YGGCCR 2 cut(s) 1141, 3239
AcsI RAATTY 6 cut(s) 20, 158, 495, 1635, 2560, 2765
AcuI CTGAAG 5 cut(s) 87, 381, 2331, 2657, 3218
AdeI CACNNNGTG 1 cut(s) 805
AfeI AGCGCT 1 cut(s) 2390
AhdI GACNNNNNGTC 1 cut(s) 1564
AhlI ACTAGT 1 cut(s) 410
Alw21I GWGCWC 3 cut(s) 988, 1699, 2206
Alw26I GTCTC 7 cut(s) 914, 1167, 2229, 2884, 2929, 3370, 3481
Alw44I GTGCAC 1 cut(s) 2202
Ama87I CYCGRG 1 cut(s) 874
Aor51HI AGCGCT 1 cut(s) 2390
ApaLI GTGCAC 1 cut(s) 2202
ApeKI GCWGC 9 cut(s) 63, 902, 1045, 1606, 2904, 3146, 3354, 3560, 3614
ApoI RAATTY 6 cut(s) 20, 158, 495, 1635, 2560, 2765
AseI ATTAAT 1 cut(s) 3128
Asp700I GAANNNNTTC 3 cut(s) 1335, 1635, 2262
Asp718I GGTACC 2 cut(s) 382, 1587
AspLEI GCGC 1 cut(s) 2391
AsuC2I CCSGG 1 cut(s) 1477
AsuHPI GGTGA 7 cut(s) 152, 224, 551, 824, 1727, 1943, 3269
AsuII TTCGAA 1 cut(s) 3094
AsuNHI GCTAGC 1 cut(s) 3617
AvaI CYCGRG 1 cut(s) 874
AvaII GGWCC 5 cut(s) 84, 311, 853, 1558, 2452
BaeGI GKGCMC 1 cut(s) 2206
BalI TGGCCA 1 cut(s) 1143
BamHI GGATCC 2 cut(s) 1741, 2173
BanI GGYRCC 3 cut(s) 382, 1587, 2834
BanII GRGCYC 1 cut(s) 3550
BauI CACGAG 2 cut(s) 387, 2268
Bbv12I GWGCWC 3 cut(s) 988, 1699, 2206
BbvI GCAGC 9 cut(s) 75, 914, 1032, 1618, 2891, 3158, 3366, 3547, 3626
BceAI ACGGC 3 cut(s) 2184, 3254, 3415
BciVI GTATCC 1 cut(s) 2091
BclI TGATCA 4 cut(s) 1513, 1771, 2428, 2623
BcnI CCSGG 1 cut(s) 1477
BcoDI GTCTC 7 cut(s) 914, 1167, 2229, 2884, 2929, 3370, 3481
BcuI ACTAGT 1 cut(s) 410
BfaI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
BfmI CTRYAG 4 cut(s) 692, 1862, 2336, 2943
BfoI RGCGCY 1 cut(s) 2392
BfuI GTATCC 1 cut(s) 2091
BglII AGATCT 1 cut(s) 2803
BlpI GCTNAGC 2 cut(s) 898, 1908
Bme18I GGWCC 5 cut(s) 84, 311, 853, 1558, 2452
BmeRI GACNNNNNGTC 1 cut(s) 1564
BmeT110I CYCGRG 1 cut(s) 874
BmrI ACTGGG 3 cut(s) 2768, 2834, 2922
BmtI GCTAGC 1 cut(s) 3621
BmuI ACTGGG 3 cut(s) 2768, 2834, 2922
BpmI CTGGAG 6 cut(s) 459, 751, 972, 2208, 3318, 3441
Bpu10I CCTNAGC 1 cut(s) 2385
Bpu1102I GCTNAGC 2 cut(s) 898, 1908
Bpu14I TTCGAA 1 cut(s) 3094
BpuEI CTTGAG 4 cut(s) 1270, 1330, 1613, 2400
BpuMI CCSGG 1 cut(s) 1477
Bsa29I ATCGAT 1 cut(s) 1666
BsaAI YACGTR 2 cut(s) 1298, 3311
BsaBI GATNNNNATC 2 cut(s) 687, 3105
BsaI GGTCTC 2 cut(s) 3370, 3481
BsaXI ACNNNNNCTCC 4 cut(s) 773, 803, 2857, 2887
Bse3DI GCAATG 3 cut(s) 1130, 1946, 2058
Bse8I GATNNNNATC 2 cut(s) 687, 3105
BseCI ATCGAT 1 cut(s) 1666
BseJI GATNNNNATC 2 cut(s) 687, 3105
BseMI GCAATG 3 cut(s) 1130, 1946, 2058
BseMII CTCAG 8 cut(s) 50, 538, 810, 912, 1625, 1712, 2579, 3045
BseRI GAGGAG 6 cut(s) 158, 424, 665, 1233, 1801, 3440
BseSI GKGCMC 1 cut(s) 2206
BseXI GCAGC 9 cut(s) 75, 914, 1032, 1618, 2891, 3158, 3366, 3547, 3626
BseYI CCCAGC 1 cut(s) 36
BsgI GTGCAG 4 cut(s) 782, 1142, 1625, 2249
Bsh1236I CGCG 1 cut(s) 1979
Bsh1285I CGRYCG 1 cut(s) 1670
BshNI GGYRCC 3 cut(s) 382, 1587, 2834
BshVI ATCGAT 1 cut(s) 1666
BsiEI CGRYCG 1 cut(s) 1670
BsiHKAI GWGCWC 3 cut(s) 988, 1699, 2206
BsiHKCI CYCGRG 1 cut(s) 874
BsiSI CCGG 2 cut(s) 1476, 2084
BslFI GGGAC 3 cut(s) 70, 1349, 2857
BsmAI GTCTC 7 cut(s) 914, 1167, 2229, 2884, 2929, 3370, 3481
BsmBI CGTCTC 1 cut(s) 1167
BsmFI GGGAC 3 cut(s) 70, 1349, 2857
BsmI GAATGC 2 cut(s) 70, 1909
Bso31I GGTCTC 2 cut(s) 3370, 3481
BsoBI CYCGRG 1 cut(s) 874
Bsp119I TTCGAA 1 cut(s) 3094
Bsp1286I GDGCHC 4 cut(s) 988, 1699, 2206, 3550
Bsp1407I TGTACA 1 cut(s) 118
Bsp1720I GCTNAGC 2 cut(s) 898, 1908
Bsp19I CCATGG 2 cut(s) 3138, 3323
Bsp68I TCGCGA 1 cut(s) 1979
BspACI CCGC 7 cut(s) 740, 1373, 1556, 2630, 2730, 2956, 3465
BspCNI CTCAG 8 cut(s) 51, 537, 811, 911, 1624, 1711, 2578, 3046
BspDI ATCGAT 1 cut(s) 1666
BspFNI CGCG 1 cut(s) 1979
BspMAI CTGCAG 3 cut(s) 696, 1866, 2340
BspOI GCTAGC 1 cut(s) 3621
BspQI GCTCTTC 1 cut(s) 1060
BspT104I TTCGAA 1 cut(s) 3094
BspT107I GGYRCC 3 cut(s) 382, 1587, 2834
BspTNI GGTCTC 2 cut(s) 3370, 3481
BsrDI GCAATG 3 cut(s) 1130, 1946, 2058
BsrGI TGTACA 1 cut(s) 118
BssSI CACGAG 2 cut(s) 387, 2268
BssT1I CCWWGG 4 cut(s) 663, 2295, 3138, 3323
Bst2BI CACGAG 2 cut(s) 387, 2268
Bst4CI ACNGT 8 cut(s) 803, 1024, 1819, 1840, 2848, 2940, 3049, 3509
Bst6I CTCTTC 1 cut(s) 1060
BstAPI GCANNNNNTGC 1 cut(s) 46
BstAUI TGTACA 1 cut(s) 118
BstBAI YACGTR 2 cut(s) 1298, 3311
BstBI TTCGAA 1 cut(s) 3094
BstC8I GCNNGC 5 cut(s) 68, 1650, 1944, 3122, 3619
BstDSI CCRYGG 2 cut(s) 3138, 3323
BstFNI CGCG 1 cut(s) 1979
BstH2I RGCGCY 1 cut(s) 2392
BstHHI GCGC 1 cut(s) 2391
BstMAI GTCTC 7 cut(s) 914, 1167, 2229, 2884, 2929, 3370, 3481
BstMCI CGRYCG 1 cut(s) 1670
BstMWI GCNNNNNNNGC 8 cut(s) 46, 745, 1070, 1603, 1948, 3025, 3143, 3535
BstNSI RCATGY 3 cut(s) 70, 3086, 3445
BstSFI CTRYAG 4 cut(s) 692, 1862, 2336, 2943
BstSLI GKGCMC 1 cut(s) 2206
BstUI CGCG 1 cut(s) 1979
BstV1I GCAGC 9 cut(s) 75, 914, 1032, 1618, 2891, 3158, 3366, 3547, 3626
BstX2I RGATCY 7 cut(s) 688, 1741, 1992, 2173, 2458, 2803, 3229
BstXI CCANNNNNNTGG 1 cut(s) 2462
BstYI RGATCY 7 cut(s) 688, 1741, 1992, 2173, 2458, 2803, 3229
Bsu15I ATCGAT 1 cut(s) 1666
BsuI GTATCC 1 cut(s) 2091
BsuTUI ATCGAT 1 cut(s) 1666
BtgI CCRYGG 2 cut(s) 3138, 3323
BtsI GCAGTG 2 cut(s) 778, 3545
BtuMI TCGCGA 1 cut(s) 1979
Cac8I GCNNGC 5 cut(s) 68, 1650, 1944, 3122, 3619
CfoI GCGC 1 cut(s) 2391
ClaI ATCGAT 1 cut(s) 1666
CseI GACGC 1 cut(s) 1184
CspCI CAANNNNNGTGG 4 cut(s) 189, 224, 2979, 3014
DraI TTTAAA 1 cut(s) 2748
DraIII CACNNNGTG 1 cut(s) 805
DriI GACNNNNNGTC 1 cut(s) 1564
EaeI YGGCCR 2 cut(s) 1141, 3239
Eam1104I CTCTTC 1 cut(s) 1060
Eam1105I GACNNNNNGTC 1 cut(s) 1564
EarI CTCTTC 1 cut(s) 1060
Eco130I CCWWGG 4 cut(s) 663, 2295, 3138, 3323
Eco24I GRGCYC 1 cut(s) 3550
Eco31I GGTCTC 2 cut(s) 3370, 3481
Eco32I GATATC 3 cut(s) 1729, 2251, 2773
Eco47I GGWCC 5 cut(s) 84, 311, 853, 1558, 2452
Eco47III AGCGCT 1 cut(s) 2390
Eco57I CTGAAG 5 cut(s) 87, 381, 2331, 2657, 3218
Eco88I CYCGRG 1 cut(s) 874
EcoO109I RGGNCCY 1 cut(s) 84
EcoRI GAATTC 3 cut(s) 20, 1635, 2560
EcoRV GATATC 3 cut(s) 1729, 2251, 2773
EcoT14I CCWWGG 4 cut(s) 663, 2295, 3138, 3323
EcoT22I ATGCAT 3 cut(s) 72, 1107, 1540
EcoT38I GRGCYC 1 cut(s) 3550
ErhI CCWWGG 4 cut(s) 663, 2295, 3138, 3323
Esp3I CGTCTC 1 cut(s) 1167
FalI AAGNNNNNCTT 2 cut(s) 2891, 2923
FaqI GGGAC 3 cut(s) 70, 1349, 2857
FauI CCCGC 1 cut(s) 2949
FauNDI CATATG 1 cut(s) 2556
FbaI TGATCA 4 cut(s) 1513, 1771, 2428, 2623
FriOI GRGCYC 1 cut(s) 3550
FspBI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
GlaI GCGC 1 cut(s) 2390
GsaI CCCAGC 1 cut(s) 40
GsuI CTGGAG 6 cut(s) 459, 751, 972, 2208, 3318, 3441
HaeII RGCGCY 1 cut(s) 2392
HapII CCGG 2 cut(s) 1476, 2084
HgaI GACGC 1 cut(s) 1184
HhaI GCGC 1 cut(s) 2391
Hin6I GCGC 1 cut(s) 2389
HinP1I GCGC 1 cut(s) 2389
HindIII AAGCTT 3 cut(s) 746, 1071, 1910
HpaII CCGG 2 cut(s) 1476, 2084
HphI GGTGA 7 cut(s) 152, 224, 551, 824, 1727, 1943, 3269
Hpy99I CGWCG 1 cut(s) 3120
HpyCH4III ACNGT 8 cut(s) 803, 1024, 1819, 1840, 2848, 2940, 3049, 3509
HpyCH4IV ACGT 3 cut(s) 1297, 3310, 3317
HpyF10VI GCNNNNNNNGC 8 cut(s) 46, 745, 1070, 1603, 1948, 3025, 3143, 3535
HpySE526I ACGT 3 cut(s) 1297, 3310, 3317
HspAI GCGC 1 cut(s) 2389
KpnI GGTACC 2 cut(s) 386, 1591
Ksp22I TGATCA 4 cut(s) 1513, 1771, 2428, 2623
LguI GCTCTTC 1 cut(s) 1060
Lsp1109I GCAGC 9 cut(s) 75, 914, 1032, 1618, 2891, 3158, 3366, 3547, 3626
MaeI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
MaeII ACGT 3 cut(s) 1297, 3310, 3317
MaeIII GTNAC 8 cut(s) 254, 812, 1322, 3049, 3203, 3318, 3503, 3638
MfeI CAATTG 3 cut(s) 617, 1227, 1467
MflI RGATCY 7 cut(s) 688, 1741, 1992, 2173, 2458, 2803, 3229
MhlI GDGCHC 4 cut(s) 988, 1699, 2206, 3550
MlsI TGGCCA 1 cut(s) 1143
MluNI TGGCCA 1 cut(s) 1143
MlyI GAGTC 2 cut(s) 809, 962
MmeI TCCRAC 1 cut(s) 514
Mox20I TGGCCA 1 cut(s) 1143
Mph1103I ATGCAT 3 cut(s) 72, 1107, 1540
MroXI GAANNNNTTC 3 cut(s) 1335, 1635, 2262
MscI TGGCCA 1 cut(s) 1143
MslI CAYNNNNRTG 6 cut(s) 201, 426, 915, 1773, 2991, 3652
Msp20I TGGCCA 1 cut(s) 1143
MspA1I CMGCKG 2 cut(s) 1375, 2732
MspI CCGG 2 cut(s) 1476, 2084
MunI CAATTG 3 cut(s) 617, 1227, 1467
Mva1269I GAATGC 2 cut(s) 70, 1909
MvnI CGCG 1 cut(s) 1979
MwoI GCNNNNNNNGC 8 cut(s) 46, 745, 1070, 1603, 1948, 3025, 3143, 3535
NciI CCSGG 1 cut(s) 1477
NcoI CCATGG 2 cut(s) 3138, 3323
NdeI CATATG 1 cut(s) 2556
NheI GCTAGC 1 cut(s) 3617
NmeAIII GCCGAG 1 cut(s) 2182
NmuCI GTSAC 5 cut(s) 254, 812, 1322, 3203, 3638
NruI TCGCGA 1 cut(s) 1979
NsiI ATGCAT 3 cut(s) 72, 1107, 1540
NspI RCATGY 3 cut(s) 70, 3086, 3445
NspV TTCGAA 1 cut(s) 3094
PaeI GCATGC 1 cut(s) 70
PaeR7I CTCGAG 1 cut(s) 874
PasI CCCWGGG 1 cut(s) 1641
PciSI GCTCTTC 1 cut(s) 1060
PcsI WCGNNNNNNNCGW 3 cut(s) 553, 2266, 3121
PctI GAATGC 2 cut(s) 70, 1909
PdmI GAANNNNTTC 3 cut(s) 1335, 1635, 2262
PfeI GAWTC 9 cut(s) 249, 1210, 1472, 1617, 1663, 1685, 1886, 2693, 3412
PflMI CCANNNNNTGG 3 cut(s) 515, 2410, 2537
PfoI TCCNGGA 2 cut(s) 643, 1475
Ple19I CGATCG 1 cut(s) 1670
PleI GAGTC 2 cut(s) 809, 962
PpsI GAGTC 2 cut(s) 809, 962
Ppu21I YACGTR 2 cut(s) 1298, 3311
PpuMI RGGWCCY 1 cut(s) 84
PshBI ATTAAT 1 cut(s) 3128
PsiI TTATAA 1 cut(s) 612
Psp1406I AACGTT 1 cut(s) 3317
Psp5II RGGWCCY 1 cut(s) 84
PspFI CCCAGC 1 cut(s) 36
PspPPI RGGWCCY 1 cut(s) 84
PspXI VCTCGAGB 1 cut(s) 874
PsrI GAACNNNNNNTAC 2 cut(s) 3028, 3060
PstI CTGCAG 3 cut(s) 696, 1866, 2340
PsuI RGATCY 7 cut(s) 688, 1741, 1992, 2173, 2458, 2803, 3229
PvuI CGATCG 1 cut(s) 1670
RruI TCGCGA 1 cut(s) 1979
RseI CAYNNNNRTG 6 cut(s) 201, 426, 915, 1773, 2991, 3652
SapI GCTCTTC 1 cut(s) 1060
SchI GAGTC 2 cut(s) 809, 962
SduI GDGCHC 4 cut(s) 988, 1699, 2206, 3550
SfcI CTRYAG 4 cut(s) 692, 1862, 2336, 2943
Sfr274I CTCGAG 1 cut(s) 874
SfuI TTCGAA 1 cut(s) 3094
SinI GGWCC 5 cut(s) 84, 311, 853, 1558, 2452
SlaI CTCGAG 1 cut(s) 874
SmiMI CAYNNNNRTG 6 cut(s) 201, 426, 915, 1773, 2991, 3652
SmlI CTYRAG 5 cut(s) 874, 1249, 1345, 1592, 2415
SmoI CTYRAG 5 cut(s) 874, 1249, 1345, 1592, 2415
SpeI ACTAGT 1 cut(s) 410
SphI GCATGC 1 cut(s) 70
SsiI CCGC 7 cut(s) 740, 1373, 1556, 2630, 2730, 2956, 3465
SspI AATATT 3 cut(s) 937, 3164, 3181
SspMI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
StyI CCWWGG 4 cut(s) 663, 2295, 3138, 3323
TaaI ACNGT 8 cut(s) 803, 1024, 1819, 1840, 2848, 2940, 3049, 3509
TaiI ACGT 3 cut(s) 1300, 3313, 3320
TaqI TCGA 6 cut(s) 172, 875, 1266, 1666, 2253, 3094
TatI WGTACW 3 cut(s) 118, 1869, 3057
TauI GCSGC 1 cut(s) 742
TfiI GAWTC 9 cut(s) 249, 1210, 1472, 1617, 1663, 1685, 1886, 2693, 3412
TseFI GTSAC 5 cut(s) 254, 812, 1322, 3203, 3638
TseI GCWGC 9 cut(s) 63, 902, 1045, 1606, 2904, 3146, 3354, 3560, 3614
Tsp45I GTSAC 5 cut(s) 254, 812, 1322, 3203, 3638
TspGWI ACGGA 2 cut(s) 273, 545
Van91I CCANNNNNTGG 3 cut(s) 515, 2410, 2537
VneI GTGCAC 1 cut(s) 2202
VpaK11BI GGWCC 5 cut(s) 84, 311, 853, 1558, 2452
VspI ATTAAT 1 cut(s) 3128
XapI RAATTY 6 cut(s) 20, 158, 495, 1635, 2560, 2765
XbaI TCTAGA 1 cut(s) 2806
XceI RCATGY 3 cut(s) 70, 3086, 3445
XcmI CCANNNNNNNNNTGG 1 cut(s) 775
XhoI CTCGAG 1 cut(s) 874
XmnI GAANNNNTTC 3 cut(s) 1335, 1635, 2262
XspI CTAG 7 cut(s) 411, 722, 1503, 2807, 3041, 3588, 3618
Zsp2I ATGCAT 3 cut(s) 72, 1107, 1540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.