Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0020558

Physical Location & Seq

Genomic Coordinates Reverse (-)

34745609 .. 34748644

Gene Structure 3036 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G024460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3036 bp

ATGCATGATCCCAGCAGTTGGCTTATTAGCAAAAAGAAAAGCAAATGGCGTTCTGCTTTTTTCACCGTCTACTGCTCTAGAGCCTTCCTCTCTTTATTAAAACCTTCCTTGCTCAAAATCACAGAAACCAAATCCCTGTCTGGTTCTCTCTCTCCTGTCAATACCACTGCCGATTCAGATCCAAACCTCGATGACTTCGGTGTTGACCAAACAGCTCTTACTCAACTTGTGAAGAACAAAAATCTCTACCAGCTGCAAGAGTTGGGAGGAGTTGAGGGAGTAATATCCCACCTCAAATCTGATGCAGTGAGTGGAATTCCTAGTGTTGATGCTGAGGACATTCTCAAAAGAATCAAAGCATTTGGTTCTAACGTTTATCAAAAAGCACCAACAAGAAGGTTTTTCCATTTTGTGTGGGAAGCCTTCAAAGACCTAACCATTCTCATTCTATTAGGCTGTGCAGCGCTCTCTCTTAATTTTGGCATCAAAGAGCATGGATTTAGAGAAGGTTGGATTGATGGTGGGAGCATATTGCTTGCAGTCATTTTGTCCATTTCTGTGTCAGCAATCGGCCCTTACTTGCAGAGCAAACATTTTGTCCACAAGAATATCCAAATTGAGGCTGTGAGAGGTGGCAAGAAGCAAAAGATTTCCCTTTCTGAAGCTGTCGTTGGTGATGTAATTATCTTGAACTGCGGAGATCAGGTGCCGGCTGATGGGTTACTTGTAGAAGGCTATTCACTGCAAGTAGACCAATCAAGCATGTCAGGACAAAGTGATGATATTGTTGAAATTAGCCATGACCAGAATCCATTCCTGTTTTCTGGGACAAAGATTACACATGGGTATGCTCGAATGATTGTCATATCCGTCGGAATGAACACAAAACGGGGTGAAATGACTGGCCAAATCAGCCAAGACACTAGTGAGAAGACACTACTGCAAGCACGTCTGGAGAAGCTAACTTCACTGATAGGTAAAGTCGGTCTGGTGGTTGCTTTCGCTGTTCTTGTAGTGTTGTTAGTTCGATACTTCACAGGGCATACGGAGGATGAGAATGGAGACAAAGAGTTCAATAACAGCATTGAAGTTGATGACATGATAAGTGCTGTAACTGGGATTATAATGGCTGCCGTTTCAATTGTGGTCGTGGCAATTCCAGAAGGTCTGCCATTAGCACTAACTCTTACTGTGGCCTATTCTATGAAGAAAATGATGGCTGACAAAGCAACGGTTCTGAGGCTCTCTGCTGCTGAGAATATGGCATTTACCACCACAATCTGTACTGACAAAACAGGTACTCTCACAATGAACCAGATGAAGGTGACCAAGTTTTGGATAGGTGAAAATAGTTTGGAACAAGAAGCCTATTCATCAAAAATTTCTCATTCTGTTCTTAATTTGATCCAAGAAGGGGTTGCTTTGAATACAAGTGGTAGTGTGTACAAGCGTAGCCTGGATTCAGAAATTGAGATCTCAGGCAGTCCAACTGAAAAGGCTATTCTATGGTGGGCAGTATATGGGTCACAGATGGATGCGGAGAAAGTAACGAAGAGTTGTAGCGTTCTCCAATTTGAGGCCTTCAACTCACAAAACAAGCGAAGTGGGGTTTTGATAAAGAGGAAGGAAGACAGCACAATTCATGTACATTGGAAAGGAGCTGCAGAGATCATACTAGGAATGTGCTCTAGTTACTACGAACCCTCTGGAGTCGTCAAACACATGGATGATAATGAAAAAGGGAAATTTCAGCAGATTATTCAAGGCATGGCAGCTAGCAGACTCCGATGCATTGCATTTGCACATAAAGAAATTCCAGCAGATCAATATCGACTGGACCTAAAACAAAAAATTATGCTACAAGATGGATTTACCCTGTTGGGACTCATAGGCCTTAAAGATCCGTGCCGTCCTGGAGTGTGGAAAGCAGTTAAAGATTGTCAAAACGCCGGGGTGAACATCAAAATGATCACAGGGGATAATGTTTTCACTGCACAAGCCATTGCCACAGAATGTGGGATACTCAAGCCTGGTCAGGACATCTTCAGTGGAGCAGTGATAGAAGGTGCGGTTTTTCAAAGCTACTCTGACGAGGATAAACTGTTGAATGTGGACAATATCTGTGTAATGGCAAGGTCCTCTGCTCTTGATAAGCTTACAATGGTGCAATACTTGAAGAAGAAACGGCATGTAGTTGCAGTGACCGGTGATGGCGCTAGTGATGCACCTGCATTAAAAGAAGCTGATATAGGACTATCTTTGGGAATTAAAGGGACACAAGTTGCCAAAGAAAGCTCAGATATCATAATCATCGATGATAACTTCGCTTCGGTGGTGAATGTTTTGGCATGTGGAAGATGTGTTTATCACAATACTCAGAAGCTCATTCAATTCCAGCTCACAGCAAATTTTACTGGTCTTGTAATCAACTTTGCAGCAGCAGCTTCATCAAGAGCAGTCCCATTTACAGTTGTTCGTTCAATTTGGTTGAACTTGATTATGGACACACTGCTAGCTCTGGCTCTTTCCAAGGACAAACCCACAAAAGAGCTCATGGAGAAGCCGCCGGTGGGCAGAACTAATCCCCTCATCACCAACATCATGTGGAGGAACCTCTCGGGTCATGCTCTGTACCAGACGATAGTCCTTTTGGTATTACAATTCAAGGGCAAAGCAATCCTTGGTGTGGATGATAAGGTACTGGGTACCTTGGTATTTAACACTTATCTTCTTTGCCAGGTGTTCAATGAGTTTAATGCAAGGAAGCTTGAGAAGAAGGATATCTTTAGGGGTTTACACACAGACAAATTGTTCATGGGGGTCATTACGGTGGCAATTGTTCTACAGGTGGTGACGCTGGAACTTTTGAGCAAATATTTGGATATAGGGAGGTTGAACTGCGGACAATGGGGACTATGTCTTGGAATTGCAGCCATGTCTTGGCCGATCGGATGGGTTGTTAAGTGTATACCCGTGCCACAGAAACCCATTCTCCGCTACCTGCTCGAGTTGAAGTTGGAAAGCAAACAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1011

Amino Acids

110.86

Weight (kDa)

8.34

Isoelectric Point (pI)

31.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	88 - 157	5.3e-13	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	207 - 303	2.1e-17	P-type ATPase actuator domain
Cation_ATPase	PF13246	467 - 638	2.1e-26	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	617 - 749	2.9e-10	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	820 - 989	2.9e-36	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0020558)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0038931
rosa_laevigata	RLG00000033881
rosa_multiflora	Rmu_sc0000533.1_g000080
rosa_rugosa	Rorug05G0175300
rosa_samantha	Rh5BG266800
rosa_wichuraiana	Rw5G024460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1124
AarI	CACCTGC	1 cut(s)	2236
Acc36I	ACCTGC	2 cut(s)	2236, 3009
Acc65I	GGTACC	1 cut(s)	2705
AccB1I	GGYRCC	2 cut(s)	706, 2705
AccB7I	CCANNNNNTGG	3 cut(s)	18, 1335, 2940
AccI	GTMKAC	3 cut(s)	69, 750, 2968
AciI	CCGC	6 cut(s)	696, 1538, 2069, 2564, 2901, 2995
AclI	AACGTT	1 cut(s)	372
AclWI	GGATC	4 cut(s)	2, 173, 1399, 1895
AcoI	YGGCCR	2 cut(s)	904, 2942
AcsI	RAATTY	5 cut(s)	315, 1380, 1745, 1812, 2407
AcuI	CTGAAG	2 cut(s)	681, 2029
AfaI	GTAC	7 cut(s)	1285, 1300, 1445, 1647, 2633, 2700, 2707
AfeI	AGCGCT	1 cut(s)	465
AgeI	ACCGGT	1 cut(s)	2204
AhlI	ACTAGT	1 cut(s)	923
AjiI	CACGTC	1 cut(s)	950
AjnI	CCWGG	4 cut(s)	1455, 1912, 2029, 2736
AjuI	GAANNNNNNNTTGG	2 cut(s)	654, 686
Alw21I	GWGCWC	2 cut(s)	1688, 2553
Alw26I	GTCTC	1 cut(s)	1056
AlwI	GGATC	4 cut(s)	2, 173, 1399, 1895
Ama87I	CYCGRG	2 cut(s)	2617, 3005
Aor51HI	AGCGCT	1 cut(s)	465
AoxI	GGCC	6 cut(s)	571, 904, 1194, 1578, 1891, 2942
ApoI	RAATTY	5 cut(s)	315, 1380, 1745, 1812, 2407
ArsI	GACNNNNNNTTYG	2 cut(s)	582, 614
AsiGI	ACCGGT	1 cut(s)	2204
Asp700I	GAANNNNTTC	1 cut(s)	812
Asp718I	GGTACC	1 cut(s)	2705
AspLEI	GCGC	2 cut(s)	466, 2216
AspS9I	GGNCC	3 cut(s)	572, 1837, 2136
AsuC2I	CCSGG	1 cut(s)	1951
AsuNHI	GCTAGC	2 cut(s)	1775, 2512
AvaI	CYCGRG	2 cut(s)	2617, 3005
AvaII	GGWCC	2 cut(s)	1837, 2136
BaeI	ACNNNNGTAYC	2 cut(s)	2697, 2730
BalI	TGGCCA	1 cut(s)	906
BanI	GGYRCC	2 cut(s)	706, 2705
BanII	GRGCYC	1 cut(s)	2553
BbsI	GAAGAC	2 cut(s)	938, 1635
Bbv12I	GWGCWC	2 cut(s)	1688, 2553
BbvCI	CCTCAGC	1 cut(s)	333
BccI	CCATC	7 cut(s)	512, 710, 1210, 1525, 1859, 2204, 2946
BceAI	ACGGC	3 cut(s)	1118, 1893, 2201
BciT130I	CCWGG	4 cut(s)	1457, 1914, 2031, 2738
BciVI	GTATCC	1 cut(s)	2013
BclI	TGATCA	1 cut(s)	1968
BcnI	CCSGG	1 cut(s)	1951
BcoDI	GTCTC	1 cut(s)	1056
BcuI	ACTAGT	1 cut(s)	923
BfaI	CTAG	8 cut(s)	78, 321, 924, 1676, 1689, 1776, 2217, 2513
BfmI	CTRYAG	2 cut(s)	1662, 2843
BfoI	RGCGCY	2 cut(s)	467, 2217
BfuAI	ACCTGC	2 cut(s)	2236, 3009
BfuI	GTATCC	1 cut(s)	2013
BglII	AGATCT	1 cut(s)	1473
Bme1390I	CCNGG	5 cut(s)	1457, 1914, 1951, 2031, 2738
Bme18I	GGWCC	2 cut(s)	1837, 2136
BmeT110I	CYCGRG	2 cut(s)	2617, 3005
BmgBI	CACGTC	1 cut(s)	950
BmgT120I	GGNCC	3 cut(s)	572, 1837, 2136
BmiI	GGNNCC	3 cut(s)	708, 2612, 2707
BmrFI	CCNGG	5 cut(s)	1457, 1914, 1951, 2031, 2738
BmrI	ACTGGG	2 cut(s)	1125, 2711
BmsI	GCATC	6 cut(s)	292, 319, 492, 1525, 1778, 2212
BmtI	GCTAGC	2 cut(s)	1779, 2516
BmuI	ACTGGG	2 cut(s)	1125, 2711
BoxI	GACNNNNGTC	1 cut(s)	2642
BpiI	GAAGAC	2 cut(s)	938, 1635
BplI	GAGNNNNNCTC	2 cut(s)	72, 104
BpmI	CTGGAG	3 cut(s)	974, 1728, 1935
Bpu10I	CCTNAGC	1 cut(s)	333
BpuEI	CTTGAG	2 cut(s)	2009, 2789
BpuMI	CCSGG	1 cut(s)	1951
Bsa29I	ATCGAT	1 cut(s)	2313
BsaBI	GATNNNNATC	2 cut(s)	177, 1827
BsaJI	CCNNGG	4 cut(s)	1950, 2529, 2680, 2709
BsaWI	WCCGGW	1 cut(s)	2204
BsaXI	ACNNNNNCTCC	4 cut(s)	690, 720, 2976, 3006
Bse118I	RCCGGY	3 cut(s)	709, 2204, 2566
Bse1I	ACTGG	5 cut(s)	907, 1120, 1839, 2419, 2706
Bse3DI	GCAATG	2 cut(s)	1791, 2001
Bse8I	GATNNNNATC	2 cut(s)	177, 1827
BseBI	CCWGG	4 cut(s)	1457, 1914, 2031, 2738
BseCI	ATCGAT	1 cut(s)	2313
BseDI	CCNNGG	4 cut(s)	1950, 2529, 2680, 2709
BseGI	GGATG	5 cut(s)	1057, 1540, 1732, 2695, 2957
BseJI	GATNNNNATC	2 cut(s)	177, 1827
BseMI	GCAATG	2 cut(s)	1791, 2001
BseMII	CTCAG	6 cut(s)	324, 1229, 1245, 1491, 2310, 2390
BseNI	ACTGG	5 cut(s)	907, 1120, 1839, 2419, 2706
BseRI	GAGGAG	1 cut(s)	282
BseYI	CCCAGC	1 cut(s)	11
BsgI	GTGCAG	2 cut(s)	480, 1977
Bsh1285I	CGRYCG	1 cut(s)	2949
BshFI	GGCC	6 cut(s)	573, 906, 1196, 1580, 1893, 2944
BshNI	GGYRCC	2 cut(s)	706, 2705
BshTI	ACCGGT	1 cut(s)	2204
BshVI	ATCGAT	1 cut(s)	2313
BsiEI	CGRYCG	1 cut(s)	2949
BsiHKAI	GWGCWC	2 cut(s)	1688, 2553
BsiHKCI	CYCGRG	2 cut(s)	2617, 3005
BsiSI	CCGG	4 cut(s)	710, 1950, 2205, 2567
BslFI	GGGAC	5 cut(s)	841, 1896, 2287, 2444, 2925
BsmAI	GTCTC	1 cut(s)	1056
BsmFI	GGGAC	5 cut(s)	841, 1896, 2287, 2444, 2925
BsnI	GGCC	6 cut(s)	573, 906, 1196, 1580, 1893, 2944
BsoBI	CYCGRG	2 cut(s)	2617, 3005
Bsp1286I	GDGCHC	2 cut(s)	1688, 2553
Bsp1407I	TGTACA	2 cut(s)	1443, 1645
BspACI	CCGC	6 cut(s)	696, 1538, 2069, 2564, 2901, 2995
BspANI	GGCC	6 cut(s)	573, 906, 1196, 1580, 1893, 2944
BspCNI	CTCAG	6 cut(s)	325, 1230, 1246, 1490, 2309, 2389
BspDI	ATCGAT	1 cut(s)	2313
BspLI	GGNNCC	3 cut(s)	708, 2612, 2707
BspMAI	CTGCAG	1 cut(s)	1666
BspMI	ACCTGC	2 cut(s)	2236, 3009
BspOI	GCTAGC	2 cut(s)	1779, 2516
BspPI	GGATC	4 cut(s)	2, 173, 1399, 1895
BspT107I	GGYRCC	2 cut(s)	706, 2705
BsrDI	GCAATG	2 cut(s)	1791, 2001
BsrFI	RCCGGY	3 cut(s)	709, 2204, 2566
BsrGI	TGTACA	2 cut(s)	1443, 1645
BsrI	ACTGG	5 cut(s)	907, 1120, 1839, 2419, 2706
BssAI	RCCGGY	3 cut(s)	709, 2204, 2566
BssECI	CCNNGG	4 cut(s)	1950, 2529, 2680, 2709
BssNAI	GTATAC	1 cut(s)	2969
BssT1I	CCWWGG	3 cut(s)	2529, 2680, 2709
Bst1107I	GTATAC	1 cut(s)	2969
Bst2UI	CCWGG	4 cut(s)	1457, 1914, 2031, 2738
Bst4CI	ACNGT	6 cut(s)	67, 1192, 1234, 2103, 2470, 2830
Bst6I	CTCTTC	1 cut(s)	1547
BstAUI	TGTACA	2 cut(s)	1443, 1645
BstC8I	GCNNGC	5 cut(s)	537, 711, 945, 1777, 2514
BstDEI	CTNAG	6 cut(s)	333, 1238, 1254, 1477, 2296, 2376
BstEII	GGTNACC	1 cut(s)	1324
BstF5I	GGATG	5 cut(s)	1057, 1540, 1732, 2695, 2957
BstH2I	RGCGCY	2 cut(s)	467, 2217
BstHHI	GCGC	2 cut(s)	466, 2216
BstMAI	GTCTC	1 cut(s)	1056
BstMCI	CGRYCG	1 cut(s)	2949
BstMWI	GCNNNNNNNGC	4 cut(s)	912, 1226, 2222, 2441
BstNI	CCWGG	4 cut(s)	1457, 1914, 2031, 2738
BstNSI	RCATGY	3 cut(s)	766, 2192, 2352
BstPAI	GACNNNNGTC	1 cut(s)	2642
BstPI	GGTNACC	1 cut(s)	1324
BstSCI	CCNGG	5 cut(s)	1455, 1912, 1949, 2029, 2736
BstSFI	CTRYAG	2 cut(s)	1662, 2843
BstV2I	GAAGAC	2 cut(s)	938, 1635
BstX2I	RGATCY	3 cut(s)	178, 1473, 1900
BstYI	RGATCY	3 cut(s)	178, 1473, 1900
BstZ17I	GTATAC	1 cut(s)	2969
Bsu15I	ATCGAT	1 cut(s)	2313
BsuI	GTATCC	1 cut(s)	2013
BsuRI	GGCC	6 cut(s)	573, 906, 1196, 1580, 1893, 2944
BsuTUI	ATCGAT	1 cut(s)	2313
BtrI	CACGTC	1 cut(s)	950
BtsCI	GGATG	5 cut(s)	1057, 1540, 1732, 2695, 2957
BtsI	GCAGTG	7 cut(s)	165, 312, 740, 1989, 2061, 2205, 2507
BtsIMutI	CAGTG	9 cut(s)	165, 312, 740, 968, 1989, 2053, 2061, 2205, 2507
BveI	ACCTGC	2 cut(s)	2236, 3009
Cac8I	GCNNGC	5 cut(s)	537, 711, 945, 1777, 2514
CfoI	GCGC	2 cut(s)	466, 2216
Cfr10I	RCCGGY	3 cut(s)	709, 2204, 2566
Cfr13I	GGNCC	3 cut(s)	572, 1837, 2136
ClaI	ATCGAT	1 cut(s)	2313
CseI	GACGC	1 cut(s)	2863
Csp6I	GTAC	7 cut(s)	1284, 1299, 1444, 1646, 2632, 2699, 2706
CspAI	ACCGGT	1 cut(s)	2204
CspCI	CAANNNNNGTGG	2 cut(s)	1585, 1620
CviQI	GTAC	7 cut(s)	1284, 1299, 1444, 1646, 2632, 2699, 2706
DdeI	CTNAG	6 cut(s)	333, 1238, 1254, 1477, 2296, 2376
EaeI	YGGCCR	2 cut(s)	904, 2942
Eam1104I	CTCTTC	1 cut(s)	1547
EarI	CTCTTC	1 cut(s)	1547
Ecl136II	GAGCTC	1 cut(s)	2551
Eco130I	CCWWGG	3 cut(s)	2529, 2680, 2709
Eco147I	AGGCCT	2 cut(s)	1580, 1893
Eco24I	GRGCYC	1 cut(s)	2553
Eco32I	GATATC	2 cut(s)	2302, 2782
Eco47I	GGWCC	2 cut(s)	1837, 2136
Eco47III	AGCGCT	1 cut(s)	465
Eco53kI	GAGCTC	1 cut(s)	2551
Eco57I	CTGAAG	2 cut(s)	681, 2029
Eco88I	CYCGRG	2 cut(s)	2617, 3005
Eco91I	GGTNACC	1 cut(s)	1324
EcoICRI	GAGCTC	1 cut(s)	2551
EcoO109I	RGGNCCY	1 cut(s)	2136
EcoO65I	GGTNACC	1 cut(s)	1324
EcoRI	GAATTC	1 cut(s)	315
EcoRII	CCWGG	4 cut(s)	1455, 1912, 2029, 2736
EcoRV	GATATC	2 cut(s)	2302, 2782
EcoT14I	CCWWGG	3 cut(s)	2529, 2680, 2709
EcoT22I	ATGCAT	2 cut(s)	6, 1793
EcoT38I	GRGCYC	1 cut(s)	2553
ErhI	CCWWGG	3 cut(s)	2529, 2680, 2709
FalI	AAGNNNNNCTT	4 cut(s)	2664, 2696, 2768, 2800
FaqI	GGGAC	5 cut(s)	841, 1896, 2287, 2444, 2925
FbaI	TGATCA	1 cut(s)	1968
FblI	GTMKAC	3 cut(s)	69, 750, 2968
FokI	GGATG	5 cut(s)	1064, 1547, 1739, 2702, 2964
FriOI	GRGCYC	1 cut(s)	2553
FspBI	CTAG	8 cut(s)	78, 321, 924, 1676, 1689, 1776, 2217, 2513
GlaI	GCGC	2 cut(s)	465, 2215
GsaI	CCCAGC	1 cut(s)	15
GsuI	CTGGAG	3 cut(s)	974, 1728, 1935
HaeII	RGCGCY	2 cut(s)	467, 2217
HaeIII	GGCC	6 cut(s)	573, 906, 1196, 1580, 1893, 2944
HapII	CCGG	4 cut(s)	710, 1950, 2205, 2567
HgaI	GACGC	1 cut(s)	2863
HhaI	GCGC	2 cut(s)	466, 2216
Hin6I	GCGC	2 cut(s)	464, 2214
HinP1I	GCGC	2 cut(s)	464, 2214
HincII	GTYRAC	1 cut(s)	205
HindII	GTYRAC	1 cut(s)	205
HindIII	AAGCTT	2 cut(s)	2153, 2765
HinfI	GANTC	7 cut(s)	173, 351, 808, 1460, 1710, 1782, 1884
HpaII	CCGG	4 cut(s)	710, 1950, 2205, 2567
Hpy166II	GTNNAC	9 cut(s)	70, 205, 601, 751, 1444, 1957, 2113, 2795, 2969
Hpy188III	TCNNGA	9 cut(s)	78, 688, 768, 953, 1160, 1707, 2036, 2147, 2451
Hpy8I	GTNNAC	9 cut(s)	70, 205, 601, 751, 1444, 1957, 2113, 2795, 2969
Hpy99I	CGWCG	1 cut(s)	875
HpyCH4III	ACNGT	6 cut(s)	67, 1192, 1234, 2103, 2470, 2830
HpyCH4IV	ACGT	2 cut(s)	372, 949
HpyF10VI	GCNNNNNNNGC	4 cut(s)	912, 1226, 2222, 2441
HpyF3I	CTNAG	6 cut(s)	333, 1238, 1254, 1477, 2296, 2376
HpySE526I	ACGT	2 cut(s)	372, 949
HspAI	GCGC	2 cut(s)	464, 2214
KpnI	GGTACC	1 cut(s)	2709
KroI	GCCGGC	1 cut(s)	709
KroNI	GCCGGC	1 cut(s)	711
Ksp22I	TGATCA	1 cut(s)	1968
LmnI	GCTCC	3 cut(s)	525, 1658, 2051
LweI	GCATC	6 cut(s)	292, 319, 492, 1525, 1778, 2212
MaeI	CTAG	8 cut(s)	78, 321, 924, 1676, 1689, 1776, 2217, 2513
MaeII	ACGT	2 cut(s)	372, 949
MaeIII	GTNAC	8 cut(s)	720, 1111, 1324, 1524, 1546, 1691, 2200, 2851
MfeI	CAATTG	2 cut(s)	1140, 2835
MflI	RGATCY	3 cut(s)	178, 1473, 1900
MhlI	GDGCHC	2 cut(s)	1688, 2553
MlsI	TGGCCA	1 cut(s)	906
MluNI	TGGCCA	1 cut(s)	906
MlyI	GAGTC	3 cut(s)	1719, 1776, 1878
MmeI	TCCRAC	4 cut(s)	491, 853, 1511, 2997
Mox20I	TGGCCA	1 cut(s)	906
Mph1103I	ATGCAT	2 cut(s)	6, 1793
MroNI	GCCGGC	1 cut(s)	709
MroXI	GAANNNNTTC	1 cut(s)	812
MscI	TGGCCA	1 cut(s)	906
MslI	CAYNNNNRTG	5 cut(s)	557, 846, 1725, 1964, 2828
Msp20I	TGGCCA	1 cut(s)	906
MspA1I	CMGCKG	1 cut(s)	253
MspI	CCGG	4 cut(s)	710, 1950, 2205, 2567
MspR9I	CCNGG	5 cut(s)	1457, 1914, 1951, 2031, 2738
MunI	CAATTG	2 cut(s)	1140, 2835
MvaI	CCWGG	4 cut(s)	1457, 1914, 2031, 2738
MwoI	GCNNNNNNNGC	4 cut(s)	912, 1226, 2222, 2441
NaeI	GCCGGC	1 cut(s)	711
NciI	CCSGG	1 cut(s)	1951
NgoMIV	GCCGGC	1 cut(s)	709
NheI	GCTAGC	2 cut(s)	1775, 2512
NlaIV	GGNNCC	3 cut(s)	708, 2612, 2707
NmuCI	GTSAC	4 cut(s)	1324, 1524, 2200, 2851
NsiI	ATGCAT	2 cut(s)	6, 1793
NspI	RCATGY	3 cut(s)	766, 2192, 2352
PaeR7I	CTCGAG	1 cut(s)	3005
PaqCI	CACCTGC	1 cut(s)	2236
PceI	AGGCCT	2 cut(s)	1580, 1893
PdiI	GCCGGC	1 cut(s)	711
PdmI	GAANNNNTTC	1 cut(s)	812
PfeI	GAWTC	4 cut(s)	173, 351, 808, 1460
PflFI	GACNNNGTC	1 cut(s)	2916
PflMI	CCANNNNNTGG	3 cut(s)	18, 1335, 2940
PfoI	TCCNGGA	1 cut(s)	1912
PinAI	ACCGGT	1 cut(s)	2204
Ple19I	CGATCG	1 cut(s)	2949
PleI	GAGTC	3 cut(s)	1718, 1776, 1878
PpsI	GAGTC	3 cut(s)	1718, 1776, 1878
PpuMI	RGGWCCY	1 cut(s)	2136
PshAI	GACNNNNGTC	1 cut(s)	2642
PsiI	TTATAA	1 cut(s)	1124
Psp124BI	GAGCTC	1 cut(s)	2553
Psp1406I	AACGTT	1 cut(s)	372
Psp5II	RGGWCCY	1 cut(s)	2136
Psp6I	CCWGG	4 cut(s)	1455, 1912, 2029, 2736
PspEI	GGTNACC	1 cut(s)	1324
PspFI	CCCAGC	1 cut(s)	11
PspGI	CCWGG	4 cut(s)	1455, 1912, 2029, 2736
PspN4I	GGNNCC	3 cut(s)	708, 2612, 2707
PspPI	GGNCC	3 cut(s)	572, 1837, 2136
PspPPI	RGGWCCY	1 cut(s)	2136
PspXI	VCTCGAGB	1 cut(s)	3005
PstI	CTGCAG	1 cut(s)	1666
PsuI	RGATCY	3 cut(s)	178, 1473, 1900
PsyI	GACNNNGTC	1 cut(s)	2916
PvuI	CGATCG	1 cut(s)	2949
PvuII	CAGCTG	1 cut(s)	253
RsaI	GTAC	7 cut(s)	1285, 1300, 1445, 1647, 2633, 2700, 2707
RsaNI	GTAC	7 cut(s)	1284, 1299, 1444, 1646, 2632, 2699, 2706
RseI	CAYNNNNRTG	5 cut(s)	557, 846, 1725, 1964, 2828
SacI	GAGCTC	1 cut(s)	2553
Sau96I	GGNCC	3 cut(s)	572, 1837, 2136
SchI	GAGTC	3 cut(s)	1719, 1776, 1878
ScrFI	CCNGG	5 cut(s)	1457, 1914, 1951, 2031, 2738
SduI	GDGCHC	2 cut(s)	1688, 2553
SfaNI	GCATC	6 cut(s)	292, 319, 492, 1525, 1778, 2212
SfcI	CTRYAG	2 cut(s)	1662, 2843
Sfr274I	CTCGAG	1 cut(s)	3005
SgrAI	CRCCGGYG	1 cut(s)	2566
SinI	GGWCC	2 cut(s)	1837, 2136
SlaI	CTCGAG	1 cut(s)	3005
SmiMI	CAYNNNNRTG	5 cut(s)	557, 846, 1725, 1964, 2828
SmlI	CTYRAG	3 cut(s)	2024, 2768, 3005
SmoI	CTYRAG	3 cut(s)	2024, 2768, 3005
SpeI	ACTAGT	1 cut(s)	923
SseBI	AGGCCT	2 cut(s)	1580, 1893
SsiI	CCGC	6 cut(s)	696, 1538, 2069, 2564, 2901, 2995
SspI	AATATT	1 cut(s)	2876
SspMI	CTAG	8 cut(s)	78, 321, 924, 1676, 1689, 1776, 2217, 2513
SstI	GAGCTC	1 cut(s)	2553
StuI	AGGCCT	2 cut(s)	1580, 1893
StyD4I	CCNGG	5 cut(s)	1455, 1912, 1949, 2029, 2736
StyI	CCWWGG	3 cut(s)	2529, 2680, 2709
TaaI	ACNGT	6 cut(s)	67, 1192, 1234, 2103, 2470, 2830
TaiI	ACGT	2 cut(s)	375, 952
TaqI	TCGA	6 cut(s)	189, 853, 1027, 1831, 2313, 3006
TaqII	GACCGA	1 cut(s)	974
TatI	WGTACW	3 cut(s)	1283, 1443, 1645
TauI	GCSGC	1 cut(s)	2566
TfiI	GAWTC	4 cut(s)	173, 351, 808, 1460
TscAI	CASTG	9 cut(s)	172, 312, 747, 975, 1996, 2053, 2061, 2205, 2514
TseFI	GTSAC	4 cut(s)	1324, 1524, 2200, 2851
Tsp45I	GTSAC	4 cut(s)	1324, 1524, 2200, 2851
TspDTI	ATGAA	9 cut(s)	893, 1220, 1325, 1334, 1362, 1631, 1749, 2436, 2803
TspGWI	ACGGA	3 cut(s)	859, 1061, 1893
TspRI	CASTG	9 cut(s)	172, 312, 747, 975, 1996, 2053, 2061, 2205, 2514
Tth111I	GACNNNGTC	1 cut(s)	2916
Van91I	CCANNNNNTGG	3 cut(s)	18, 1335, 2940
VpaK11BI	GGWCC	2 cut(s)	1837, 2136
XapI	RAATTY	5 cut(s)	315, 1380, 1745, 1812, 2407
XbaI	TCTAGA	1 cut(s)	77
XceI	RCATGY	3 cut(s)	766, 2192, 2352
XhoI	CTCGAG	1 cut(s)	3005
XmiI	GTMKAC	3 cut(s)	69, 750, 2968
XmnI	GAANNNNTTC	1 cut(s)	812
XspI	CTAG	8 cut(s)	78, 321, 924, 1676, 1689, 1776, 2217, 2513
Zsp2I	ATGCAT	2 cut(s)	6, 1793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.