Rmu_sc0000581.1_g000005

Aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000581.1
Physical Location & Seq
Reverse (-)
24425 .. 26698
2274 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000581.1_g000005.1.cds

Sequence Viewer

Length: 1335 bp
atggagatcatcaatgatcagttaactggagctgaatatcggaaggccagggtttatgaacgtgcttggtcttgggttaaggccttgccgggaaagttaaaaaacaaagttaccaaagttgcaaagaacactatcaagctaggaaaagatgatccgagaagagtcattcactctctgaaagtggctatggctctcacattggtatccttattgtactattggagagccctttatgatggtcttggggttgcaggaatgtgggcggttctaacagtggtagtagtgtttgaattcactgtaggtgcaacactcagcaagggtttaaacagaagctttgccacattacttgccggtgctctaggaattggagcaaatcacttggctggtctgttcggggagcaaggagagcccattatcctaggcgtccttgtcttcctactagctgcagcatctacattttcgaggtttttccctaggatcaaggcgagatatgattatggggtgttgatattcatactgacgtttagtatggtaactgtatctggatatcgggttgaggggcttttggagatggccgatcaaagactagttacagttttaattggtggaggaacctgcataatcatagcaatttttttatgtccagtatgggctggtgaagatttgcacaatcttatagcatccaacatggacaagcttgcaaactacctagaaggaattggaggaggtgaatattttcaattgcctaaggatggaaagtctaccaaggtcacaaaaaatgatggatatcaaagtgtcctaaactcaaaaaccactgaagactcctgggtgccacaagaatttctacaaatagttcaagcctcgtgcataacaatgagtactgagtctggcaaagccctaaaagctttaggcacagcaatcaaaaccatgaaggacccgaaatctgcctgtcaacatttggagacctccaaaaatgcagtagaagaccttcacattgcactgaaagctgcatcactggaaaatgcagacatccttgcaattataccagctgccacagttgcttcaatattagttgagattgtcaaatgtgtggagaaaatttccatgtcagttcatgagctttcccaacaagcacatttcaaagtggcggagccaactgtttcaccagagaataagccgcaattacttcacagaggaagcataaaccctctactcttggatgatggtgatgatagtgcccatgttgtgatcacagtagatgaaatgggttctcaagaaaatgacgaaaattctcatcaggcgccaaaagtcccaaaaccaagtgaagaagtgtaa

Protein Analysis

444

Amino Acids

48.25

Weight (kDa)

6.39

Isoelectric Point (pI)

27.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11680 AT3G11680
fragaria_vesca FvH4_6g20330
malus_domestica MD12G1040500.v1.1 MD14G1039500.v1.1
prunus_persica Prupe.7G094400_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0475951
rosa_laevigata RLG00000023797
rosa_multiflora Rmu_sc0000581.1_g000005
rosa_roxburghii Rroxscaffold_6G00405680
rosa_rugosa Rorug03G0152300
rosa_samantha Rh3AG203100 Rh3BG232900 Rh3CG228400 Rh3DG228600
rosa_wichuraiana Rw3G018470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 623
AccB1I GGYRCC 2 cut(s) 829, 1300
AccI GTMKAC 1 cut(s) 761
AciI CCGC 3 cut(s) 263, 1148, 1178
AclWI GGATC 2 cut(s) 146, 485
AcoI YGGCCR 1 cut(s) 573
AcsI RAATTY 4 cut(s) 290, 839, 1098, 1288
AcuI CTGAAG 1 cut(s) 837
AcyI GRCGYC 2 cut(s) 423, 1301
AfaI GTAC 2 cut(s) 215, 880
AfiI CCNNNNNNNGG 1 cut(s) 752
AgsI TTSAA 5 cut(s) 290, 740, 857, 1065, 1141
AhlI ACTAGT 1 cut(s) 586
AjnI CCWGG 2 cut(s) 47, 824
AluBI AGCT 9 cut(s) 32, 139, 333, 443, 697, 905, 1007, 1049, 1120
AluI AGCT 9 cut(s) 32, 139, 333, 443, 697, 905, 1007, 1049, 1120
Alw21I GWGCWC 1 cut(s) 358
Alw26I GTCTC 1 cut(s) 956
AlwI GGATC 2 cut(s) 146, 485
AoxI GGCC 3 cut(s) 45, 81, 573
ApeKI GCWGC 4 cut(s) 443, 446, 1007, 1049
ApoI RAATTY 4 cut(s) 290, 839, 1098, 1288
Asp700I GAANNNNTTC 2 cut(s) 735, 987
AspA2I CCTAGG 2 cut(s) 418, 473
AspLEI GCGC 1 cut(s) 1303
AspS9I GGNCC 1 cut(s) 934
AsuC2I CCSGG 1 cut(s) 90
AsuHPI GGTGA 4 cut(s) 668, 740, 1155, 1238
AvaII GGWCC 1 cut(s) 934
AvrII CCTAGG 2 cut(s) 418, 473
AxyI CCTNAGG 1 cut(s) 747
BaeGI GKGCMC 1 cut(s) 1240
BaeI ACNNNNGTAYC 2 cut(s) 186, 219
BanI GGYRCC 2 cut(s) 829, 1300
BanII GRGCYC 2 cut(s) 229, 411
BarI GAAGNNNNNNTAC 2 cut(s) 972, 1004
BauI CACGAG 1 cut(s) 862
BbsI GAAGAC 3 cut(s) 424, 825, 990
Bbv12I GWGCWC 1 cut(s) 358
BbvI GCAGC 4 cut(s) 430, 458, 994, 1036
BccI CCATC 5 cut(s) 230, 565, 746, 776, 1217
BciT130I CCWGG 2 cut(s) 49, 826
BciVI GTATCC 1 cut(s) 214
BclI TGATCA 2 cut(s) 16, 1248
BcnI CCSGG 1 cut(s) 90
BcoDI GTCTC 1 cut(s) 956
BcuI ACTAGT 1 cut(s) 586
BfaI CTAG 7 cut(s) 140, 359, 419, 440, 474, 587, 710
BfmI CTRYAG 2 cut(s) 297, 444
BfoI RGCGCY 1 cut(s) 1304
BfuAI ACCTGC 1 cut(s) 623
BfuI GTATCC 1 cut(s) 214
BisI GCNGC 5 cut(s) 444, 447, 1008, 1050, 1178
BlnI CCTAGG 2 cut(s) 418, 473
BlsI GCNGC 5 cut(s) 445, 448, 1009, 1051, 1179
BmcAI AGTACT 1 cut(s) 880
Bme1390I CCNGG 3 cut(s) 49, 90, 826
Bme18I GGWCC 1 cut(s) 934
BmgT120I GGNCC 1 cut(s) 934
BmiI GGNNCC 5 cut(s) 613, 831, 936, 1152, 1302
BmrFI CCNGG 3 cut(s) 49, 90, 826
BmsI GCATC 3 cut(s) 458, 689, 1019
BpiI GAAGAC 3 cut(s) 424, 825, 990
BpmI CTGGAG 1 cut(s) 48
BpuEI CTTGAG 1 cut(s) 1257
BpuMI CCSGG 1 cut(s) 90
BsaBI GATNNNNATC 1 cut(s) 786
BsaHI GRCGYC 2 cut(s) 423, 1301
BsaI GGTCTC 1 cut(s) 956
BsaJI CCNNGG 5 cut(s) 48, 418, 473, 765, 825
Bsc4I CCNNNNNNNGG 1 cut(s) 752
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 3 cut(s) 31, 644, 1020
Bse21I CCTNAGG 1 cut(s) 747
Bse3DI GCAATG 1 cut(s) 993
Bse8I GATNNNNATC 1 cut(s) 786
BseBI CCWGG 2 cut(s) 49, 826
BseDI CCNNGG 5 cut(s) 48, 418, 473, 765, 825
BseGI GGATG 4 cut(s) 680, 757, 1029, 1225
BseJI GATNNNNATC 1 cut(s) 786
BseLI CCNNNNNNNGG 1 cut(s) 752
BseMI GCAATG 1 cut(s) 993
BseMII CTCAG 2 cut(s) 325, 873
BseNI ACTGG 3 cut(s) 31, 644, 1020
BseRI GAGGAG 1 cut(s) 738
BseSI GKGCMC 1 cut(s) 1240
BseXI GCAGC 4 cut(s) 430, 458, 994, 1036
BshFI GGCC 3 cut(s) 47, 83, 575
BshNI GGYRCC 2 cut(s) 829, 1300
BsiHKAI GWGCWC 1 cut(s) 358
BsiSI CCGG 2 cut(s) 89, 351
BslFI GGGAC 1 cut(s) 1295
BslI CCNNNNNNNGG 1 cut(s) 752
BsmAI GTCTC 1 cut(s) 956
BsmFI GGGAC 1 cut(s) 1295
BsnI GGCC 3 cut(s) 47, 83, 575
Bso31I GGTCTC 1 cut(s) 956
Bsp1286I GDGCHC 4 cut(s) 229, 358, 411, 1240
Bsp143I GATC 6 cut(s) 6, 16, 151, 477, 577, 1248
BspACI CCGC 3 cut(s) 263, 1148, 1178
BspANI GGCC 3 cut(s) 47, 83, 575
BspCNI CTCAG 2 cut(s) 324, 874
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 5 cut(s) 613, 831, 936, 1152, 1302
BspMAI CTGCAG 1 cut(s) 448
BspMI ACCTGC 1 cut(s) 623
BspPI GGATC 2 cut(s) 146, 485
BspT107I GGYRCC 2 cut(s) 829, 1300
BspTNI GGTCTC 1 cut(s) 956
BsrDI GCAATG 1 cut(s) 993
BsrFI RCCGGY 1 cut(s) 350
BsrI ACTGG 3 cut(s) 31, 644, 1020
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 5 cut(s) 48, 418, 473, 765, 825
BssMI GATC 6 cut(s) 6, 16, 151, 477, 577, 1248
BssNI GRCGYC 2 cut(s) 423, 1301
BssSI CACGAG 1 cut(s) 862
BssT1I CCWWGG 3 cut(s) 418, 473, 765
Bst2BI CACGAG 1 cut(s) 862
Bst2UI CCWGG 2 cut(s) 49, 826
Bst4CI ACNGT 7 cut(s) 274, 298, 538, 595, 1057, 1159, 1255
Bst6I CTCTTC 1 cut(s) 154
BstACI GRCGYC 2 cut(s) 423, 1301
BstC8I GCNNGC 1 cut(s) 699
BstDEI CTNAG 3 cut(s) 311, 747, 882
BstF5I GGATG 4 cut(s) 680, 757, 1029, 1225
BstH2I RGCGCY 1 cut(s) 1304
BstHHI GCGC 1 cut(s) 1303
BstKTI GATC 6 cut(s) 9, 19, 154, 480, 580, 1251
BstMAI GTCTC 1 cut(s) 956
BstMBI GATC 6 cut(s) 6, 16, 151, 477, 577, 1248
BstMWI GCNNNNNNNGC 4 cut(s) 406, 902, 1004, 1058
BstNI CCWGG 2 cut(s) 49, 826
BstSCI CCNGG 3 cut(s) 47, 88, 824
BstSFI CTRYAG 2 cut(s) 297, 444
BstSLI GKGCMC 1 cut(s) 1240
BstV1I GCAGC 4 cut(s) 430, 458, 994, 1036
BstV2I GAAGAC 3 cut(s) 424, 825, 990
Bsu36I CCTNAGG 1 cut(s) 747
BsuI GTATCC 1 cut(s) 214
BsuRI GGCC 3 cut(s) 47, 83, 575
BtsCI GGATG 4 cut(s) 680, 757, 1029, 1225
BtsIMutI CAGTG 5 cut(s) 279, 294, 813, 998, 1013
BveI ACCTGC 1 cut(s) 623
Cac8I GCNNGC 1 cut(s) 699
CciI TCATGA 1 cut(s) 1114
CfoI GCGC 1 cut(s) 1303
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 1 cut(s) 934
CseI GACGC 1 cut(s) 412
Csp6I GTAC 2 cut(s) 214, 879
CspCI CAANNNNNGTGG 2 cut(s) 328, 363
CviAII CATG 5 cut(s) 688, 928, 1105, 1115, 1241
CviQI GTAC 2 cut(s) 214, 879
DdeI CTNAG 3 cut(s) 311, 747, 882
DinI GGCGCC 1 cut(s) 1302
DpnI GATC 6 cut(s) 8, 18, 153, 479, 579, 1250
DpnII GATC 6 cut(s) 6, 16, 151, 477, 577, 1248
DraI TTTAAA 1 cut(s) 324
EaeI YGGCCR 1 cut(s) 573
Eam1104I CTCTTC 1 cut(s) 154
EarI CTCTTC 1 cut(s) 154
EciI GGCGGA 1 cut(s) 1163
Eco130I CCWWGG 3 cut(s) 418, 473, 765
Eco147I AGGCCT 1 cut(s) 83
Eco24I GRGCYC 2 cut(s) 229, 411
Eco31I GGTCTC 1 cut(s) 956
Eco32I GATATC 2 cut(s) 548, 788
Eco47I GGWCC 1 cut(s) 934
Eco57I CTGAAG 1 cut(s) 837
Eco81I CCTNAGG 1 cut(s) 747
EcoO109I RGGNCCY 1 cut(s) 934
EcoRI GAATTC 1 cut(s) 290
EcoRII CCWGG 2 cut(s) 47, 824
EcoRV GATATC 2 cut(s) 548, 788
EcoT14I CCWWGG 3 cut(s) 418, 473, 765
EcoT38I GRGCYC 2 cut(s) 229, 411
EgeI GGCGCC 1 cut(s) 1302
EheI GGCGCC 1 cut(s) 1302
ErhI CCWWGG 3 cut(s) 418, 473, 765
FaeI CATG 5 cut(s) 691, 931, 1108, 1118, 1244
FaqI GGGAC 1 cut(s) 1295
FatI CATG 5 cut(s) 687, 927, 1104, 1114, 1240
FbaI TGATCA 2 cut(s) 16, 1248
FblI GTMKAC 1 cut(s) 761
Fnu4HI GCNGC 5 cut(s) 444, 447, 1008, 1050, 1178
FokI GGATG 4 cut(s) 667, 764, 1016, 1232
FriOI GRGCYC 2 cut(s) 229, 411
Fsp4HI GCNGC 5 cut(s) 444, 447, 1008, 1050, 1178
FspBI CTAG 7 cut(s) 140, 359, 419, 440, 474, 587, 710
GlaI GCGC 1 cut(s) 1302
GluI GCNGC 5 cut(s) 444, 447, 1008, 1050, 1178
GsuI CTGGAG 1 cut(s) 48
HaeII RGCGCY 1 cut(s) 1304
HaeIII GGCC 3 cut(s) 47, 83, 575
HapII CCGG 2 cut(s) 89, 351
HgaI GACGC 1 cut(s) 412
HhaI GCGC 1 cut(s) 1303
Hin1I GRCGYC 2 cut(s) 423, 1301
Hin1II CATG 5 cut(s) 691, 931, 1108, 1118, 1244
Hin6I GCGC 1 cut(s) 1301
HinP1I GCGC 1 cut(s) 1301
HincII GTYRAC 2 cut(s) 24, 953
HindII GTYRAC 2 cut(s) 24, 953
HindIII AAGCTT 3 cut(s) 331, 695, 903
HinfI GANTC 3 cut(s) 162, 821, 884
HpaI GTTAAC 1 cut(s) 24
HpaII CCGG 2 cut(s) 89, 351
HphI GGTGA 4 cut(s) 668, 740, 1155, 1238
Hpy166II GTNNAC 3 cut(s) 24, 762, 953
Hpy188I TCNGA 3 cut(s) 42, 156, 177
Hpy188III TCNNGA 3 cut(s) 543, 1115, 1274
Hpy8I GTNNAC 3 cut(s) 24, 762, 953
HpyAV CCTTC 4 cut(s) 37, 707, 925, 998
HpyCH4III ACNGT 7 cut(s) 274, 298, 538, 595, 1057, 1159, 1255
HpyCH4IV ACGT 2 cut(s) 61, 521
HpyF10VI GCNNNNNNNGC 4 cut(s) 406, 902, 1004, 1058
HpyF3I CTNAG 3 cut(s) 311, 747, 882
HpySE526I ACGT 2 cut(s) 61, 521
Hsp92I GRCGYC 2 cut(s) 423, 1301
Hsp92II CATG 5 cut(s) 691, 931, 1108, 1118, 1244
HspAI GCGC 1 cut(s) 1301
KasI GGCGCC 1 cut(s) 1300
Ksp22I TGATCA 2 cut(s) 16, 1248
KspAI GTTAAC 1 cut(s) 24
Kzo9I GATC 6 cut(s) 6, 16, 151, 477, 577, 1248
LmnI GCTCC 4 cut(s) 29, 368, 397, 1150
Lsp1109I GCAGC 4 cut(s) 430, 458, 994, 1036
LweI GCATC 3 cut(s) 458, 689, 1019
MaeI CTAG 7 cut(s) 140, 359, 419, 440, 474, 587, 710
MaeII ACGT 2 cut(s) 61, 521
MaeIII GTNAC 4 cut(s) 109, 532, 589, 769
MalI GATC 6 cut(s) 8, 18, 153, 479, 579, 1250
MboI GATC 6 cut(s) 6, 16, 151, 477, 577, 1248
MboII GAAGA 5 cut(s) 171, 424, 671, 830, 995
MfeI CAATTG 1 cut(s) 740
MhlI GDGCHC 4 cut(s) 229, 358, 411, 1240
Mly113I GGCGCC 1 cut(s) 1301
MlyI GAGTC 3 cut(s) 171, 815, 893
MmeI TCCRAC 1 cut(s) 708
MnlI CCTC 9 cut(s) 456, 550, 602, 716, 719, 871, 976, 1187, 1218
MroXI GAANNNNTTC 2 cut(s) 735, 987
MseI TTAA 5 cut(s) 23, 78, 98, 323, 599
MslI CAYNNNNRTG 1 cut(s) 872
MspA1I CMGCKG 1 cut(s) 1049
MspI CCGG 2 cut(s) 89, 351
MspR9I CCNGG 3 cut(s) 49, 90, 826
MssI GTTTAAAC 1 cut(s) 324
MunI CAATTG 1 cut(s) 740
MvaI CCWGG 2 cut(s) 49, 826
MwoI GCNNNNNNNGC 4 cut(s) 406, 902, 1004, 1058
NarI GGCGCC 1 cut(s) 1301
NciI CCSGG 1 cut(s) 90
NdeII GATC 6 cut(s) 6, 16, 151, 477, 577, 1248
NlaIII CATG 5 cut(s) 691, 931, 1108, 1118, 1244
NlaIV GGNNCC 5 cut(s) 613, 831, 936, 1152, 1302
NmuCI GTSAC 1 cut(s) 769
PagI TCATGA 1 cut(s) 1114
PceI AGGCCT 1 cut(s) 83
PdmI GAANNNNTTC 2 cut(s) 735, 987
PkrI GCNGC 5 cut(s) 445, 448, 1009, 1051, 1179
PleI GAGTC 3 cut(s) 170, 815, 892
PluTI GGCGCC 1 cut(s) 1304
PmeI GTTTAAAC 1 cut(s) 324
PpsI GAGTC 3 cut(s) 170, 815, 892
PpuMI RGGWCCY 1 cut(s) 934
Psp5II RGGWCCY 1 cut(s) 934
Psp6I CCWGG 2 cut(s) 47, 824
PspGI CCWGG 2 cut(s) 47, 824
PspN4I GGNNCC 5 cut(s) 613, 831, 936, 1152, 1302
PspPI GGNCC 1 cut(s) 934
PspPPI RGGWCCY 1 cut(s) 934
PstI CTGCAG 1 cut(s) 448
PvuII CAGCTG 1 cut(s) 1049
RsaI GTAC 2 cut(s) 215, 880
RsaNI GTAC 2 cut(s) 214, 879
RseI CAYNNNNRTG 1 cut(s) 872
SaqAI TTAA 5 cut(s) 23, 78, 98, 323, 599
SatI GCNGC 5 cut(s) 444, 447, 1008, 1050, 1178
Sau3AI GATC 6 cut(s) 6, 16, 151, 477, 577, 1248
Sau96I GGNCC 1 cut(s) 934
ScaI AGTACT 1 cut(s) 880
SchI GAGTC 3 cut(s) 171, 815, 893
ScrFI CCNGG 3 cut(s) 49, 90, 826
SduI GDGCHC 4 cut(s) 229, 358, 411, 1240
SfaNI GCATC 3 cut(s) 458, 689, 1019
SfcI CTRYAG 2 cut(s) 297, 444
SfoI GGCGCC 1 cut(s) 1302
SinI GGWCC 1 cut(s) 934
SmiMI CAYNNNNRTG 1 cut(s) 872
SmlI CTYRAG 1 cut(s) 1272
SmoI CTYRAG 1 cut(s) 1272
SpeI ACTAGT 1 cut(s) 586
SseBI AGGCCT 1 cut(s) 83
SsiI CCGC 3 cut(s) 263, 1148, 1178
SspDI GGCGCC 1 cut(s) 1300
SspI AATATT 2 cut(s) 734, 1068
SspMI CTAG 7 cut(s) 140, 359, 419, 440, 474, 587, 710
StuI AGGCCT 1 cut(s) 83
StyD4I CCNGG 3 cut(s) 47, 88, 824
StyI CCWWGG 3 cut(s) 418, 473, 765
TaaI ACNGT 7 cut(s) 274, 298, 538, 595, 1057, 1159, 1255
TaiI ACGT 2 cut(s) 64, 524
TaqI TCGA 1 cut(s) 461
TatI WGTACW 2 cut(s) 213, 878
TauI GCSGC 1 cut(s) 1180
Tru1I TTAA 5 cut(s) 23, 78, 98, 323, 599
Tru9I TTAA 5 cut(s) 23, 78, 98, 323, 599
TscAI CASTG 5 cut(s) 279, 301, 820, 1005, 1020
TseFI GTSAC 1 cut(s) 769
TseI GCWGC 4 cut(s) 443, 446, 1007, 1049
Tsp45I GTSAC 1 cut(s) 769
TspDTI ATGAA 5 cut(s) 72, 502, 944, 1103, 1275
TspRI CASTG 5 cut(s) 279, 301, 820, 1005, 1020
VpaK11BI GGWCC 1 cut(s) 934
XapI RAATTY 4 cut(s) 290, 839, 1098, 1288
XmaJI CCTAGG 2 cut(s) 418, 473
XmiI GTMKAC 1 cut(s) 761
XmnI GAANNNNTTC 2 cut(s) 735, 987
XspI CTAG 7 cut(s) 140, 359, 419, 440, 474, 587, 710
ZrmI AGTACT 1 cut(s) 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.