Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001640.1

Orthogroup ID

OG0009121

Physical Location & Seq

Genomic Coordinates Reverse (-)

11620 .. 13632

Gene Structure 2013 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001640.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

atggacaataggcctcagaacctgggttttgctgctaatcactcctcaaatattttcaagatcttgggcaattcaatgccagttcgcagagctggaggtgactattgcacagataccatcttacggcttaattcccctggttcttcgatcagttacatgtcaagcccgaaaggaaccaaacggaagtggagtgtgattgatgtatccttgaaccaacatgttcgctcttcactgtctcttgggcttggccattcaccaagttcttcagacagcaaggggagttcagcaactgtttgcactacaatgtcttcggccaaagaaaccgatgaggagtcctcaatggatcttgaactggacttttctctgcatcttggaaatgaaaaggtacctagcctgaagaaacctgctacttcaaacctgaccgcaccagacctccagcctaacgttgacttggagctaagtctctcaactgtgctctctgaatctggaatcacttctgtggatcgtagttctacttctgttctttcaggcatggagatgccaccagcgattggcggggcccaaaatgcagatgaagtatccacttcatgccactggaagccaggggttgccgttaagccattccaggcttcactgaatccaggggctcatttccttttcaaaccagttccaaataaacttgattccattcctactgttccagatatctcatcaagtatattgaccacaccaaatagctcagtcacatgtgcttctgcgatcacacacagacaacagccacatcatcgcagctccaattcaaagacgtgtcaggttgagggatgtggaaagggtgccagaggtgcttcgggccgctgcatatctcatggtggtggtaggaggtgtcagagagctggctgccacaaaggtgctgagggccgcacagtgtattgtaaggctcatggtggtggccggcgatgtgaattcctggggtgcaccaagagtgcagaaggacgcacggatttttgtattgcccatggtggtggtcggagatgcagtcatgatggttgcacaagagctgccagaggcaaatcaggattgtgcatccgtcatggcggcggcaagagatgtcaaagagaaaattgcaccaaaagtgccgagggactctcaggcctttgcatctcacatggaggtggtcgcagatgccaggctataggatgcacaaaaggggcacaagggagcacaatgttctgcaaggctcatggtggagggaaacgatgcactgctccaggttgcaccaagggagctgaagggagcacgccctattgcaagggccatgggggagggaagaggtgtgcattccaaggtggtgggcattgtacaaagagtgtgcatggaggtaccaatttctgtgtggcacatgggggtggcaagcgatgtgccatgcctgagtgtacaaagagtgcaaggggacggactgactactgtgtccgacatggtggaggcaaaagatgcaagtttgaagggtgtggcaagagtgcacaaggcagtactgacttctgcaaggcacatggtggaggaaagagatgctcttggggccatcctgggtctgtttatgggcgccaagctgtgggtccttgcaactcatttgcaagggggaagacaggtctttgtgcactccatagtggtctggttcaggataagagggtccatggaggtgttaccctggggcctatagttcaggaacctaaacttggaaagttggaaaagatgaaagaagttgatgaaatgaatgttgatgaagccatgactattgggagcatagctactacagtaagcagaagctgctctgatctgaagcatggtggtagctccgttggtcaaccttcagtcattgttccagaaggccgtgtccatgggggaagtctgatggcgctgcttgcaggtggttcagatactgccaacacaaacatcatgggaagtgattcatctgtgccagtgaagtcttactcgatgcccaagaactggatgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

670

Amino Acids

69.65

Weight (kDa)

9.33

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009121)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64140
fragaria_vesca	FvH4_5g03650 FvH4_5g03650
malus_domestica	MD06G1096100.v1.1 MD14G1116300.v1.1
prunus_persica	Prupe.5G110700_v2.0.a1 Prupe.5G110700_v2.0.a1 Prupe.5G110700_v2.0.a1 Prupe.5G110700_v2.0.a1 Prupe.5G110700_v2.0.a1
pyrus_communis	pycom06g09240
rosa_chinensis	RchiOBHm_Chr7g0196081 RchiOBHm_Chr7g0196091
rosa_laevigata	RLG00000004067
rosa_multiflora	Rmu_sc0001640.1_g000004
rosa_roxburghii	Rroxscaffold_3G00259880
rosa_rugosa	Rorug07G0030100
rosa_samantha	Rh7AG156200 Rh7BG157900 Rh7CG161600 Rh7DG157200
rosa_wichuraiana	Rw7G013350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1913
AasI	GACNNNNNNGTC	1 cut(s)	1466
Acc36I	ACCTGC	2 cut(s)	412, 1913
Acc65I	GGTACC	2 cut(s)	385, 1379
AccB1I	GGYRCC	4 cut(s)	385, 833, 1379, 1599
AccB7I	CCANNNNNTGG	3 cut(s)	551, 1609, 2004
AciI	CCGC	6 cut(s)	423, 555, 853, 919, 1095, 1098
AclI	AACGTT	1 cut(s)	444
AclWI	GGATC	2 cut(s)	351, 510
AcoI	YGGCCR	3 cut(s)	247, 312, 949
AcsI	RAATTY	1 cut(s)	962
AcuI	CTGAAG	5 cut(s)	249, 416, 1308, 1851, 1856
AcyI	GRCGYC	1 cut(s)	1600
AdeI	CACNNNGTG	1 cut(s)	1553
AfaI	GTAC	5 cut(s)	387, 1360, 1381, 1435, 1531
AfiI	CCNNNNNNNGG	5 cut(s)	123, 551, 1609, 1733, 2004
AflIII	ACRYGT	4 cut(s)	156, 217, 746, 806
AgsI	TTSAA	8 cut(s)	58, 75, 211, 350, 414, 661, 801, 1502
AjiI	CACGTC	1 cut(s)	807
AjuI	GAANNNNNNNTTGG	2 cut(s)	1716, 1748
AleI	CACNNNNGTG	2 cut(s)	497, 906
Alw21I	GWGCWC	6 cut(s)	477, 977, 1223, 1298, 1522, 1657
Alw26I	GTCTC	2 cut(s)	240, 467
Alw44I	GTGCAC	3 cut(s)	973, 1518, 1653
AlwI	GGATC	2 cut(s)	351, 510
AlwNI	CAGNNNCTG	4 cut(s)	22, 290, 1824, 1937
ApaI	GGGCCC	1 cut(s)	562
ApaLI	GTGCAC	3 cut(s)	973, 1518, 1653
ApeKI	GCWGC	7 cut(s)	32, 789, 855, 897, 1058, 1824, 1915
ApoI	RAATTY	1 cut(s)	962
Asp700I	GAANNNNTTC	2 cut(s)	493, 1963
Asp718I	GGTACC	2 cut(s)	385, 1379
AspLEI	GCGC	2 cut(s)	1602, 1915
AspS9I	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
AsuHPI	GGTGA	2 cut(s)	110, 246
AvaII	GGWCC	2 cut(s)	1613, 1687
BaeGI	GKGCMC	5 cut(s)	562, 977, 1213, 1522, 1657
BalI	TGGCCA	1 cut(s)	249
BanI	GGYRCC	4 cut(s)	385, 833, 1379, 1599
BanII	GRGCYC	2 cut(s)	562, 649
BarI	GAAGNNNNNNTAC	2 cut(s)	499, 531
BbsI	GAAGAC	2 cut(s)	300, 1646
Bbv12I	GWGCWC	6 cut(s)	477, 977, 1223, 1298, 1522, 1657
BbvCI	CCTCAGC	1 cut(s)	912
BbvI	GCAGC	7 cut(s)	19, 801, 842, 884, 1045, 1811, 1902
BccI	CCATC	4 cut(s)	125, 1037, 1587, 1903
BceAI	ACGGC	3 cut(s)	140, 596, 1872
BciVI	GTATCC	2 cut(s)	214, 589
BcoDI	GTCTC	2 cut(s)	240, 467
BfaI	CTAG	1 cut(s)	390
BfmI	CTRYAG	3 cut(s)	1191, 1713, 1809
BfoI	RGCGCY	2 cut(s)	1603, 1916
BfuAI	ACCTGC	2 cut(s)	412, 1913
BfuI	GTATCC	2 cut(s)	214, 589
BglII	AGATCT	1 cut(s)	60
BmcAI	AGTACT	1 cut(s)	1531
Bme18I	GGWCC	2 cut(s)	1613, 1687
BmgBI	CACGTC	1 cut(s)	807
BmgT120I	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
BpiI	GAAGAC	2 cut(s)	300, 1646
BplI	GAGNNNNNCTC	4 cut(s)	320, 352, 1130, 1162
BpmI	CTGGAG	3 cut(s)	114, 419, 1251
Bpu10I	CCTNAGC	1 cut(s)	912
BsaHI	GRCGYC	1 cut(s)	1600
BsaXI	ACNNNNNCTCC	4 cut(s)	417, 447, 1021, 1051
Bsc4I	CCNNNNNNNGG	5 cut(s)	123, 551, 1609, 1733, 2004
Bse118I	RCCGGY	1 cut(s)	951
Bse1I	ACTGG	6 cut(s)	80, 357, 599, 665, 1976, 2009
BseGI	GGATG	5 cut(s)	827, 1083, 1202, 1579, 2013
BseLI	CCNNNNNNNGG	5 cut(s)	123, 551, 1609, 1733, 2004
BseMII	CTCAG	5 cut(s)	29, 753, 903, 1161, 1419
BseNI	ACTGG	6 cut(s)	80, 357, 599, 665, 1976, 2009
BseRI	GAGGAG	2 cut(s)	34, 344
BseSI	GKGCMC	5 cut(s)	562, 977, 1213, 1522, 1657
BseXI	GCAGC	7 cut(s)	19, 801, 842, 884, 1045, 1811, 1902
BsgI	GTGCAG	1 cut(s)	1005
BshNI	GGYRCC	4 cut(s)	385, 833, 1379, 1599
BsiHKAI	GWGCWC	6 cut(s)	477, 977, 1223, 1298, 1522, 1657
BsiSI	CCGG	1 cut(s)	952
BslFI	GGGAC	2 cut(s)	1155, 1464
BslI	CCNNNNNNNGG	5 cut(s)	123, 551, 1609, 1733, 2004
BsmAI	GTCTC	2 cut(s)	240, 467
BsmFI	GGGAC	2 cut(s)	1155, 1464
BsmI	GAATGC	1 cut(s)	1337
Bsp120I	GGGCCC	1 cut(s)	558
Bsp1286I	GDGCHC	9 cut(s)	477, 562, 649, 977, 1213, 1223, 1298, 1522, 1657
Bsp1407I	TGTACA	2 cut(s)	1358, 1433
Bsp143I	GATC	6 cut(s)	60, 147, 343, 502, 759, 1831
Bsp19I	CCATGG	4 cut(s)	1015, 1315, 1690, 1894
BspACI	CCGC	6 cut(s)	423, 555, 853, 919, 1095, 1098
BspCNI	CTCAG	5 cut(s)	28, 752, 904, 1160, 1420
BspHI	TCATGA	1 cut(s)	1039
BspMI	ACCTGC	2 cut(s)	412, 1913
BspPI	GGATC	2 cut(s)	351, 510
BspQI	GCTCTTC	1 cut(s)	232
BspT107I	GGYRCC	4 cut(s)	385, 833, 1379, 1599
BsrFI	RCCGGY	1 cut(s)	951
BsrGI	TGTACA	2 cut(s)	1358, 1433
BsrI	ACTGG	6 cut(s)	80, 357, 599, 665, 1976, 2009
BssAI	RCCGGY	1 cut(s)	951
BssMI	GATC	6 cut(s)	60, 147, 343, 502, 759, 1831
BssNI	GRCGYC	1 cut(s)	1600
BssT1I	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
Bst4CI	ACNGT	7 cut(s)	234, 292, 472, 697, 925, 1466, 1813
Bst6I	CTCTTC	2 cut(s)	232, 1322
BstACI	GRCGYC	1 cut(s)	1600
BstAPI	GCANNNNNTGC	2 cut(s)	1491, 1824
BstAUI	TGTACA	2 cut(s)	1358, 1433
BstC8I	GCNNGC	5 cut(s)	895, 953, 1298, 1412, 1920
BstDEI	CTNAG	6 cut(s)	15, 458, 739, 912, 1147, 1428
BstDSI	CCRYGG	4 cut(s)	1015, 1315, 1690, 1894
BstF5I	GGATG	5 cut(s)	827, 1083, 1202, 1579, 2013
BstH2I	RGCGCY	2 cut(s)	1603, 1916
BstHHI	GCGC	2 cut(s)	1602, 1915
BstKTI	GATC	6 cut(s)	63, 150, 346, 505, 762, 1834
BstMAI	GTCTC	2 cut(s)	240, 467
BstMBI	GATC	6 cut(s)	60, 147, 343, 502, 759, 1831
BstMWI	GCNNNNNNNGC	6 cut(s)	566, 842, 1491, 1575, 1824, 1919
BstNSI	RCATGY	3 cut(s)	160, 221, 750
BstSFI	CTRYAG	3 cut(s)	1191, 1713, 1809
BstSLI	GKGCMC	5 cut(s)	562, 977, 1213, 1522, 1657
BstV1I	GCAGC	7 cut(s)	19, 801, 842, 884, 1045, 1811, 1902
BstV2I	GAAGAC	2 cut(s)	300, 1646
BstX2I	RGATCY	2 cut(s)	60, 343
BstXI	CCANNNNNNTGG	2 cut(s)	1022, 1349
BstYI	RGATCY	2 cut(s)	60, 343
BsuI	GTATCC	2 cut(s)	214, 589
BtgI	CCRYGG	4 cut(s)	1015, 1315, 1690, 1894
BtgZI	GCGATG	3 cut(s)	770, 970, 1429
BtrI	CACGTC	1 cut(s)	807
BtsCI	GGATG	5 cut(s)	827, 1083, 1202, 1579, 2013
BtsI	GCAGTG	1 cut(s)	1260
BtsIMutI	CAGTG	6 cut(s)	230, 592, 632, 930, 1260, 1983
BveI	ACCTGC	2 cut(s)	412, 1913
Cac8I	GCNNGC	5 cut(s)	895, 953, 1298, 1412, 1920
CaiI	CAGNNNCTG	4 cut(s)	22, 290, 1824, 1937
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	2 cut(s)	1602, 1915
Cfr10I	RCCGGY	1 cut(s)	951
Cfr13I	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
CseI	GACGC	1 cut(s)	1002
Csp6I	GTAC	5 cut(s)	386, 1359, 1380, 1434, 1530
CviQI	GTAC	5 cut(s)	386, 1359, 1380, 1434, 1530
DdeI	CTNAG	6 cut(s)	15, 458, 739, 912, 1147, 1428
DinI	GGCGCC	1 cut(s)	1601
DpnI	GATC	6 cut(s)	62, 149, 345, 504, 761, 1833
DpnII	GATC	6 cut(s)	60, 147, 343, 502, 759, 1831
DraIII	CACNNNGTG	1 cut(s)	1553
DrdI	GACNNNNNNGTC	1 cut(s)	1466
DseDI	GACNNNNNNGTC	1 cut(s)	1466
EaeI	YGGCCR	3 cut(s)	247, 312, 949
Eam1104I	CTCTTC	2 cut(s)	232, 1322
EarI	CTCTTC	2 cut(s)	232, 1322
Eco130I	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
Eco147I	AGGCCT	2 cut(s)	13, 1152
Eco24I	GRGCYC	2 cut(s)	562, 649
Eco32I	GATATC	1 cut(s)	706
Eco47I	GGWCC	2 cut(s)	1613, 1687
Eco57I	CTGAAG	5 cut(s)	249, 416, 1308, 1851, 1856
EcoO109I	RGGNCCY	3 cut(s)	558, 1613, 1709
EcoRI	GAATTC	1 cut(s)	962
EcoRV	GATATC	1 cut(s)	706
EcoT14I	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
EcoT38I	GRGCYC	2 cut(s)	562, 649
EgeI	GGCGCC	1 cut(s)	1601
EheI	GGCGCC	1 cut(s)	1601
ErhI	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
FaqI	GGGAC	2 cut(s)	1155, 1464
FauI	CCCGC	1 cut(s)	548
FokI	GGATG	4 cut(s)	834, 1070, 1209, 1566
FriOI	GRGCYC	2 cut(s)	562, 649
FspBI	CTAG	1 cut(s)	390
GlaI	GCGC	2 cut(s)	1601, 1914
GsuI	CTGGAG	3 cut(s)	114, 419, 1251
HaeII	RGCGCY	2 cut(s)	1603, 1916
HapII	CCGG	1 cut(s)	952
HgaI	GACGC	1 cut(s)	1002
HhaI	GCGC	2 cut(s)	1602, 1915
Hin1I	GRCGYC	1 cut(s)	1600
Hin6I	GCGC	2 cut(s)	1600, 1913
HinP1I	GCGC	2 cut(s)	1600, 1913
HincII	GTYRAC	2 cut(s)	448, 1862
HindII	GTYRAC	2 cut(s)	448, 1862
HinfI	GANTC	7 cut(s)	332, 482, 489, 637, 683, 1143, 1964
HpaII	CCGG	1 cut(s)	952
HphI	GGTGA	2 cut(s)	110, 246
Hpy166II	GTNNAC	6 cut(s)	448, 975, 1434, 1520, 1655, 1862
Hpy188III	TCNNGA	9 cut(s)	58, 347, 486, 701, 1040, 1074, 1676, 1721, 1880
Hpy8I	GTNNAC	6 cut(s)	448, 975, 1434, 1520, 1655, 1862
HpyAV	CCTTC	5 cut(s)	983, 1283, 1496, 1875, 1877
HpyCH4III	ACNGT	7 cut(s)	234, 292, 472, 697, 925, 1466, 1813
HpyCH4IV	ACGT	2 cut(s)	444, 806
HpyF10VI	GCNNNNNNNGC	6 cut(s)	566, 842, 1491, 1575, 1824, 1919
HpyF3I	CTNAG	6 cut(s)	15, 458, 739, 912, 1147, 1428
HpySE526I	ACGT	2 cut(s)	444, 806
Hsp92I	GRCGYC	1 cut(s)	1600
HspAI	GCGC	2 cut(s)	1600, 1913
KasI	GGCGCC	1 cut(s)	1599
KpnI	GGTACC	2 cut(s)	389, 1383
KroI	GCCGGC	1 cut(s)	951
KroNI	GCCGGC	1 cut(s)	953
Kzo9I	GATC	6 cut(s)	60, 147, 343, 502, 759, 1831
LguI	GCTCTTC	1 cut(s)	232
LmnI	GCTCC	8 cut(s)	454, 797, 1218, 1270, 1283, 1293, 1797, 1856
Lsp1109I	GCAGC	7 cut(s)	19, 801, 842, 884, 1045, 1811, 1902
MaeI	CTAG	1 cut(s)	390
MaeII	ACGT	2 cut(s)	444, 806
MaeIII	GTNAC	4 cut(s)	98, 152, 742, 1699
MalI	GATC	6 cut(s)	62, 149, 345, 504, 761, 1833
MboI	GATC	6 cut(s)	60, 147, 343, 502, 759, 1831
MboII	GAAGA	7 cut(s)	135, 219, 255, 300, 409, 1339, 1651
MflI	RGATCY	2 cut(s)	60, 343
MhlI	GDGCHC	9 cut(s)	477, 562, 649, 977, 1213, 1223, 1298, 1522, 1657
MlsI	TGGCCA	1 cut(s)	249
MluCI	AATT	6 cut(s)	70, 130, 796, 962, 1120, 1384
MluNI	TGGCCA	1 cut(s)	249
Mly113I	GGCGCC	1 cut(s)	1600
MlyI	GAGTC	2 cut(s)	341, 1137
MmeI	TCCRAC	3 cut(s)	1007, 1495, 1722
Mox20I	TGGCCA	1 cut(s)	249
MroNI	GCCGGC	1 cut(s)	951
MroXI	GAANNNNTTC	2 cut(s)	493, 1963
MscI	TGGCCA	1 cut(s)	249
MseI	TTAA	2 cut(s)	129, 615
Msp20I	TGGCCA	1 cut(s)	249
MspA1I	CMGCKG	1 cut(s)	855
MspI	CCGG	1 cut(s)	952
Mva1269I	GAATGC	1 cut(s)	1337
MwoI	GCNNNNNNNGC	6 cut(s)	566, 842, 1491, 1575, 1824, 1919
NaeI	GCCGGC	1 cut(s)	953
NarI	GGCGCC	1 cut(s)	1600
NcoI	CCATGG	4 cut(s)	1015, 1315, 1690, 1894
NdeII	GATC	6 cut(s)	60, 147, 343, 502, 759, 1831
NgoMIV	GCCGGC	1 cut(s)	951
NmeAIII	GCCGAG	1 cut(s)	1162
NmuCI	GTSAC	2 cut(s)	98, 742
NspI	RCATGY	3 cut(s)	160, 221, 750
OliI	CACNNNNGTG	2 cut(s)	497, 906
PagI	TCATGA	1 cut(s)	1039
PaqCI	CACCTGC	1 cut(s)	1913
PasI	CCCWGGG	1 cut(s)	1705
PceI	AGGCCT	2 cut(s)	13, 1152
PciI	ACATGT	3 cut(s)	156, 217, 746
PciSI	GCTCTTC	1 cut(s)	232
PctI	GAATGC	1 cut(s)	1337
PdiI	GCCGGC	1 cut(s)	953
PdmI	GAANNNNTTC	2 cut(s)	493, 1963
PfeI	GAWTC	5 cut(s)	482, 489, 637, 683, 1964
PflMI	CCANNNNNTGG	3 cut(s)	551, 1609, 2004
PleI	GAGTC	2 cut(s)	340, 1137
PluTI	GGCGCC	1 cut(s)	1603
PpsI	GAGTC	2 cut(s)	340, 1137
PpuMI	RGGWCCY	1 cut(s)	1613
PscI	ACATGT	3 cut(s)	156, 217, 746
Psp1406I	AACGTT	1 cut(s)	444
Psp5II	RGGWCCY	1 cut(s)	1613
PspOMI	GGGCCC	1 cut(s)	558
PspPI	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
PspPPI	RGGWCCY	1 cut(s)	1613
PstNI	CAGNNNCTG	4 cut(s)	22, 290, 1824, 1937
PsuI	RGATCY	2 cut(s)	60, 343
RsaI	GTAC	5 cut(s)	387, 1360, 1381, 1435, 1531
RsaNI	GTAC	5 cut(s)	386, 1359, 1380, 1434, 1530
SapI	GCTCTTC	1 cut(s)	232
SaqAI	TTAA	2 cut(s)	129, 615
Sau3AI	GATC	6 cut(s)	60, 147, 343, 502, 759, 1831
Sau96I	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
ScaI	AGTACT	1 cut(s)	1531
SchI	GAGTC	2 cut(s)	341, 1137
SduI	GDGCHC	9 cut(s)	477, 562, 649, 977, 1213, 1223, 1298, 1522, 1657
SfcI	CTRYAG	3 cut(s)	1191, 1713, 1809
SfoI	GGCGCC	1 cut(s)	1601
SinI	GGWCC	2 cut(s)	1613, 1687
Sse9I	AATT	6 cut(s)	70, 130, 796, 962, 1120, 1384
SseBI	AGGCCT	2 cut(s)	13, 1152
SsiI	CCGC	6 cut(s)	423, 555, 853, 919, 1095, 1098
SspDI	GGCGCC	1 cut(s)	1599
SspI	AATATT	1 cut(s)	52
SspMI	CTAG	1 cut(s)	390
StuI	AGGCCT	2 cut(s)	13, 1152
StyI	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
TaaI	ACNGT	7 cut(s)	234, 292, 472, 697, 925, 1466, 1813
TaiI	ACGT	2 cut(s)	447, 809
TaqI	TCGA	2 cut(s)	146, 1991
TasI	AATT	6 cut(s)	70, 130, 796, 962, 1120, 1384
TatI	WGTACW	3 cut(s)	1358, 1433, 1529
TauI	GCSGC	4 cut(s)	855, 921, 1098, 1101
TfiI	GAWTC	5 cut(s)	482, 489, 637, 683, 1964
Tru1I	TTAA	2 cut(s)	129, 615
Tru9I	TTAA	2 cut(s)	129, 615
TscAI	CASTG	6 cut(s)	237, 599, 639, 930, 1267, 1983
TseFI	GTSAC	2 cut(s)	98, 742
TseI	GCWGC	7 cut(s)	32, 789, 855, 897, 1058, 1824, 1915
Tsp45I	GTSAC	2 cut(s)	98, 742
TspDTI	ATGAA	8 cut(s)	393, 576, 588, 1766, 1779, 1784, 1794, 1956
TspGWI	ACGGA	5 cut(s)	196, 1013, 1076, 1468, 1843
TspRI	CASTG	6 cut(s)	237, 599, 639, 930, 1267, 1983
Van91I	CCANNNNNTGG	3 cut(s)	551, 1609, 2004
VneI	GTGCAC	3 cut(s)	973, 1518, 1653
VpaK11BI	GGWCC	2 cut(s)	1613, 1687
XapI	RAATTY	1 cut(s)	962
XceI	RCATGY	3 cut(s)	160, 221, 750
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1390
XmnI	GAANNNNTTC	2 cut(s)	493, 1963
XspI	CTAG	1 cut(s)	390
ZrmI	AGTACT	1 cut(s)	1531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.