Rmu_sc0001670.1_g000040
NAC Family

Inactive protein kinase SELMODRAFT_444075-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001670.1
Physical Location & Seq
Reverse (-)
191421 .. 194751
3331 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001670.1_g000040.1.cds

Sequence Viewer

Length: 1620 bp
atggttggggagcgctccgataaagtaatagtggcggtgaaggcggagaaggtgatttccaacaccgcattggcatgggcgctcactcacgtagttcaacccggcgactgcgtcaccttgctcgccatcatctctccccttaaaactggtaacagattctggagatttccgagattcagcggagactgcgggagtcggcacagggaggatttgccggatcggatttgtcagatctccgagtcttgttcccagatggtgcttcagtttcataatcaaatccaggtaacagtgaggattaaggtagttttaagtactcccggtggtactgtggcagccgaagcaacatgcaatggagccaactgggtcgtactggacaaaaaactgaaacaagagaggaagcattgcatggaggaacttggatgcaacattgttgtaatgaacgggtctcagcctaaagtcctaaagctgaatctggggtgctcagatgaactccaaacccaattcttttctgttgcttcctcaccaggaactcgccttcgaagattggaagagcataggatgaataccactccagtgagtagtcctgaagaaccaagtagctcctgcacaagaacgacaggagaaggttcatcatcaagttacgacactgtgacttctcttttccttgtctatgagcagaatcctttatttgaaggacaacaagcgagaaatcacagaccacatgatttggaagatccatatgaagaacttgactcaattggagaaaggcttataactctgtgtaagccccgaacatcaactctagcttctacgcagagtgtcttttggatcccccaaaaccacagtggtggtagaaagcactccaaaccccaagcttataaaaaatcacacaaagtaagatctcccactttccaaactctatttgacgagtatgcacagtttgatcaagatacaaggattgacagagctgaacccagggaaaaccataacaaaggctacattactaattcaaacattagggatgctgtttccttgggtacatcttcctcaatacctcctcctttatgctctctatgccaacataaaacaccagtttttggaaaacctccaaaacagttctcttaccaagaattagaggaagctacggacgcattctcagatgttaacttcttggcagaaggtggcttcggtgtggttcatagaggggtgttgagagacggccaagttgttgccgtgaagcagttgaagttcggtggttctcaagcagatgctgatttctgtagggaagtgcgcgtattgagctgtgcgcaacacaggaatgttgtgttgctcattgggtattgtattgaaggcaagtcaaggttactggtttatgagtacatctgcaacagctccttggatttccatttacatggtgtggcaggaaacagaactcccctggattacgagtcaaggctaaagatagctactggaactgctcgtggattaagatatgctttactcatttgctttcttattaggttgcggactttgggcttgctagatggcactctgaatgggagaccagcactgaggaccggtgtattggaacttcagggtatcttgcaccagaatatatag

Protein Analysis

539

Amino Acids

59.94

Weight (kDa)

8.58

Isoelectric Point (pI)

38.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 773, 879
Acc16I TGCGCA 1 cut(s) 1308
AccB7I CCANNNNNTGG 1 cut(s) 1097
AccII CGCG 1 cut(s) 1293
AciI CCGC 6 cut(s) 35, 44, 66, 180, 189, 1525
AclWI GGATC 4 cut(s) 225, 728, 823, 836
AcoI YGGCCR 1 cut(s) 1219
AcuI CTGAAG 3 cut(s) 245, 606, 1577
AfaI GTAC 5 cut(s) 313, 325, 369, 1039, 1379
AfeI AGCGCT 1 cut(s) 14
AfiI CCNNNNNNNGG 1 cut(s) 1097
AgeI ACCGGT 1 cut(s) 1577
AgsI TTSAA 5 cut(s) 98, 692, 1011, 1246, 1349
AjnI CCWGG 4 cut(s) 279, 523, 974, 1437
AleI CACNNNNGTG 2 cut(s) 572, 846
AluBI AGCT 9 cut(s) 466, 600, 806, 875, 968, 1142, 1302, 1392, 1466
AluI AGCT 9 cut(s) 466, 600, 806, 875, 968, 1142, 1302, 1392, 1466
Alw21I GWGCWC 1 cut(s) 482
Alw26I GTCTC 4 cut(s) 177, 450, 1209, 1555
AlwI GGATC 4 cut(s) 225, 728, 823, 836
AlwNI CAGNNNCTG 2 cut(s) 159, 1271
Aor51HI AGCGCT 1 cut(s) 14
AoxI GGCC 1 cut(s) 1219
ApeKI GCWGC 1 cut(s) 332
AsiGI ACCGGT 1 cut(s) 1577
AspLEI GCGC 4 cut(s) 15, 82, 1293, 1309
AspS9I GGNCC 1 cut(s) 1575
AsuC2I CCSGG 2 cut(s) 102, 318
AsuHPI GGTGA 4 cut(s) 49, 64, 106, 513
AsuII TTCGAA 1 cut(s) 538
AvaII GGWCC 1 cut(s) 1575
BamHI GGATCC 1 cut(s) 828
BarI GAAGNNNNNNTAC 2 cut(s) 1575, 1607
BauI CACGAG 1 cut(s) 1479
Bbv12I GWGCWC 1 cut(s) 482
BbvI GCAGC 1 cut(s) 344
BccI CCATC 3 cut(s) 134, 247, 1538
BceAI ACGGC 2 cut(s) 1217, 1234
BciT130I CCWGG 4 cut(s) 281, 525, 976, 1439
BclI TGATCA 1 cut(s) 943
BcnI CCSGG 2 cut(s) 102, 318
BcoDI GTCTC 4 cut(s) 177, 450, 1209, 1555
BfaI CTAG 2 cut(s) 803, 1541
BfmI CTRYAG 1 cut(s) 1279
BfoI RGCGCY 2 cut(s) 16, 83
BglII AGATCT 2 cut(s) 231, 899
BisI GCNGC 1 cut(s) 333
BlsI GCNGC 1 cut(s) 334
BmcAI AGTACT 1 cut(s) 313
Bme1390I CCNGG 6 cut(s) 102, 281, 318, 525, 976, 1439
Bme18I GGWCC 1 cut(s) 1575
BmgT120I GGNCC 1 cut(s) 1575
BmiI GGNNCC 2 cut(s) 355, 830
BmrFI CCNGG 6 cut(s) 102, 281, 318, 525, 976, 1439
BmrI ACTGGG 1 cut(s) 370
BmsI GCATC 3 cut(s) 410, 1012, 1258
BmuI ACTGGG 1 cut(s) 370
BpmI CTGGAG 2 cut(s) 181, 555
Bpu14I TTCGAA 1 cut(s) 538
BpuEI CTTGAG 1 cut(s) 1245
BpuMI CCSGG 2 cut(s) 102, 318
BsaAI YACGTR 1 cut(s) 91
BsaI GGTCTC 2 cut(s) 450, 1555
BsaJI CCNNGG 5 cut(s) 974, 975, 1032, 1395, 1437
BsaWI WCCGGW 1 cut(s) 1577
Bsc4I CCNNNNNNNGG 1 cut(s) 1097
Bse118I RCCGGY 1 cut(s) 1577
Bse1I ACTGG 7 cut(s) 151, 365, 375, 572, 1091, 1371, 1474
Bse3DI GCAATG 2 cut(s) 355, 400
BseBI CCWGG 4 cut(s) 281, 525, 976, 1439
BseDI CCNNGG 5 cut(s) 974, 975, 1032, 1395, 1437
BseGI GGATG 3 cut(s) 425, 564, 1027
BseLI CCNNNNNNNGG 1 cut(s) 1097
BseMI GCAATG 2 cut(s) 355, 400
BseMII CTCAG 4 cut(s) 461, 495, 1170, 1562
BseNI ACTGG 7 cut(s) 151, 365, 375, 572, 1091, 1371, 1474
BseRI GAGGAG 1 cut(s) 1047
BseXI GCAGC 1 cut(s) 344
BsgI GTGCAG 1 cut(s) 589
Bsh1236I CGCG 1 cut(s) 1293
BshFI GGCC 1 cut(s) 1221
BshTI ACCGGT 1 cut(s) 1577
BsiHKAI GWGCWC 1 cut(s) 482
BsiSI CCGG 4 cut(s) 102, 215, 318, 1578
BslI CCNNNNNNNGG 1 cut(s) 1097
BsmAI GTCTC 4 cut(s) 177, 450, 1209, 1555
BsmBI CGTCTC 1 cut(s) 1209
BsmI GAATGC 1 cut(s) 1151
BsnI GGCC 1 cut(s) 1221
Bso31I GGTCTC 2 cut(s) 450, 1555
Bsp119I TTCGAA 1 cut(s) 538
Bsp1286I GDGCHC 1 cut(s) 482
Bsp143I GATC 6 cut(s) 217, 231, 733, 828, 899, 943
BspACI CCGC 6 cut(s) 35, 44, 66, 180, 189, 1525
BspANI GGCC 1 cut(s) 1221
BspCNI CTCAG 4 cut(s) 460, 494, 1169, 1563
BspFNI CGCG 1 cut(s) 1293
BspLI GGNNCC 2 cut(s) 355, 830
BspPI GGATC 4 cut(s) 225, 728, 823, 836
BspQI GCTCTTC 1 cut(s) 543
BspT104I TTCGAA 1 cut(s) 538
BspTNI GGTCTC 2 cut(s) 450, 1555
BsrDI GCAATG 2 cut(s) 355, 400
BsrFI RCCGGY 1 cut(s) 1577
BsrI ACTGG 7 cut(s) 151, 365, 375, 572, 1091, 1371, 1474
BssAI RCCGGY 1 cut(s) 1577
BssECI CCNNGG 5 cut(s) 974, 975, 1032, 1395, 1437
BssMI GATC 6 cut(s) 217, 231, 733, 828, 899, 943
BssSI CACGAG 1 cut(s) 1479
BssT1I CCWWGG 2 cut(s) 1032, 1395
Bst2BI CACGAG 1 cut(s) 1479
Bst2UI CCWGG 4 cut(s) 281, 525, 976, 1439
Bst4CI ACNGT 6 cut(s) 289, 328, 649, 845, 939, 1116
Bst6I CTCTTC 1 cut(s) 543
BstBAI YACGTR 1 cut(s) 91
BstBI TTCGAA 1 cut(s) 538
BstC8I GCNNGC 2 cut(s) 123, 1538
BstDEI CTNAG 4 cut(s) 447, 481, 1156, 1571
BstF5I GGATG 3 cut(s) 425, 564, 1027
BstFNI CGCG 1 cut(s) 1293
BstH2I RGCGCY 2 cut(s) 16, 83
BstHHI GCGC 4 cut(s) 15, 82, 1293, 1309
BstKTI GATC 6 cut(s) 220, 234, 736, 831, 902, 946
BstMAI GTCTC 4 cut(s) 177, 450, 1209, 1555
BstMBI GATC 6 cut(s) 217, 231, 733, 828, 899, 943
BstMWI GCNNNNNNNGC 6 cut(s) 41, 186, 338, 1074, 1148, 1299
BstNI CCWGG 4 cut(s) 281, 525, 976, 1439
BstNSI RCATGY 1 cut(s) 348
BstSCI CCNGG 6 cut(s) 100, 279, 316, 523, 974, 1437
BstSFI CTRYAG 1 cut(s) 1279
BstUI CGCG 1 cut(s) 1293
BstV1I GCAGC 1 cut(s) 344
BstX2I RGATCY 4 cut(s) 231, 733, 828, 899
BstXI CCANNNNNNTGG 2 cut(s) 848, 1412
BstYI RGATCY 4 cut(s) 231, 733, 828, 899
BsuRI GGCC 1 cut(s) 1221
BtsCI GGATG 3 cut(s) 425, 564, 1027
BtsIMutI CAGTG 5 cut(s) 294, 579, 645, 850, 1568
Cac8I GCNNGC 2 cut(s) 123, 1538
CaiI CAGNNNCTG 2 cut(s) 159, 1271
CfoI GCGC 4 cut(s) 15, 82, 1293, 1309
Cfr10I RCCGGY 1 cut(s) 1577
Cfr13I GGNCC 1 cut(s) 1575
CseI GACGC 2 cut(s) 100, 1157
Csp6I GTAC 5 cut(s) 312, 324, 368, 1038, 1378
CspAI ACCGGT 1 cut(s) 1577
CspCI CAANNNNNGTGG 2 cut(s) 708, 743
CviAII CATG 5 cut(s) 75, 345, 406, 722, 1412
CviQI GTAC 5 cut(s) 312, 324, 368, 1038, 1378
DdeI CTNAG 4 cut(s) 447, 481, 1156, 1571
DpnI GATC 6 cut(s) 219, 233, 735, 830, 901, 945
DpnII GATC 6 cut(s) 217, 231, 733, 828, 899, 943
EaeI YGGCCR 1 cut(s) 1219
Eam1104I CTCTTC 1 cut(s) 543
EarI CTCTTC 1 cut(s) 543
EciI GGCGGA 1 cut(s) 59
Eco130I CCWWGG 2 cut(s) 1032, 1395
Eco31I GGTCTC 2 cut(s) 450, 1555
Eco47I GGWCC 1 cut(s) 1575
Eco47III AGCGCT 1 cut(s) 14
Eco57I CTGAAG 3 cut(s) 245, 606, 1577
EcoRII CCWGG 4 cut(s) 279, 523, 974, 1437
EcoT14I CCWWGG 2 cut(s) 1032, 1395
ErhI CCWWGG 2 cut(s) 1032, 1395
Esp3I CGTCTC 1 cut(s) 1209
FaeI CATG 5 cut(s) 78, 348, 409, 725, 1415
FalI AAGNNNNNCTT 2 cut(s) 1480, 1512
FatI CATG 5 cut(s) 74, 344, 405, 721, 1411
FauI CCCGC 1 cut(s) 182
FauNDI CATATG 1 cut(s) 739
FbaI TGATCA 1 cut(s) 943
Fnu4HI GCNGC 1 cut(s) 333
FokI GGATG 3 cut(s) 432, 571, 1034
Fsp4HI GCNGC 1 cut(s) 333
FspBI CTAG 2 cut(s) 803, 1541
FspI TGCGCA 1 cut(s) 1308
GlaI GCGC 4 cut(s) 14, 81, 1292, 1308
GluI GCNGC 1 cut(s) 333
GsuI CTGGAG 2 cut(s) 181, 555
HaeII RGCGCY 2 cut(s) 16, 83
HaeIII GGCC 1 cut(s) 1221
HapII CCGG 4 cut(s) 102, 215, 318, 1578
HgaI GACGC 2 cut(s) 100, 1157
HhaI GCGC 4 cut(s) 15, 82, 1293, 1309
Hin1II CATG 5 cut(s) 78, 348, 409, 725, 1415
Hin6I GCGC 4 cut(s) 13, 80, 1291, 1307
HinP1I GCGC 4 cut(s) 13, 80, 1291, 1307
HincII GTYRAC 1 cut(s) 1165
HindII GTYRAC 1 cut(s) 1165
HindIII AAGCTT 1 cut(s) 873
HinfI GANTC 8 cut(s) 156, 174, 193, 239, 469, 679, 752, 1448
HpaI GTTAAC 1 cut(s) 1165
HpaII CCGG 4 cut(s) 102, 215, 318, 1578
HphI GGTGA 4 cut(s) 49, 64, 106, 513
Hpy166II GTNNAC 1 cut(s) 1165
Hpy188I TCNGA 8 cut(s) 19, 171, 222, 231, 238, 484, 1159, 1554
Hpy188III TCNNGA 3 cut(s) 160, 584, 947
Hpy8I GTNNAC 1 cut(s) 1165
HpyAV CCTTC 7 cut(s) 34, 43, 545, 617, 686, 1172, 1343
HpyCH4III ACNGT 6 cut(s) 289, 328, 649, 845, 939, 1116
HpyCH4IV ACGT 1 cut(s) 90
HpyCH4V TGCA 7 cut(s) 348, 405, 423, 606, 935, 1386, 1606
HpyF10VI GCNNNNNNNGC 6 cut(s) 41, 186, 338, 1074, 1148, 1299
HpyF3I CTNAG 4 cut(s) 447, 481, 1156, 1571
HpySE526I ACGT 1 cut(s) 90
Hsp92II CATG 5 cut(s) 78, 348, 409, 725, 1415
HspAI GCGC 4 cut(s) 13, 80, 1291, 1307
Ksp22I TGATCA 1 cut(s) 943
KspAI GTTAAC 1 cut(s) 1165
Kzo9I GATC 6 cut(s) 217, 231, 733, 828, 899, 943
LguI GCTCTTC 1 cut(s) 543
LmnI GCTCC 5 cut(s) 10, 20, 353, 605, 1397
Lsp1109I GCAGC 1 cut(s) 344
LweI GCATC 3 cut(s) 410, 1012, 1258
MaeI CTAG 2 cut(s) 803, 1541
MaeII ACGT 1 cut(s) 90
MaeIII GTNAC 6 cut(s) 112, 149, 283, 638, 649, 1362
MalI GATC 6 cut(s) 219, 233, 735, 830, 901, 945
MboI GATC 6 cut(s) 217, 231, 733, 828, 899, 943
MboII GAAGA 6 cut(s) 552, 560, 599, 743, 755, 1035
MfeI CAATTG 1 cut(s) 756
MflI RGATCY 4 cut(s) 231, 733, 828, 899
MhlI GDGCHC 1 cut(s) 482
MluCI AATT 4 cut(s) 500, 756, 1006, 1130
MlyI GAGTC 4 cut(s) 202, 248, 746, 1457
MmeI TCCRAC 1 cut(s) 84
MseI TTAA 5 cut(s) 141, 297, 308, 1164, 1487
MslI CAYNNNNRTG 5 cut(s) 73, 572, 846, 1317, 1410
MspA1I CMGCKG 1 cut(s) 180
MspI CCGG 4 cut(s) 102, 215, 318, 1578
MspR9I CCNGG 6 cut(s) 102, 281, 318, 525, 976, 1439
MunI CAATTG 1 cut(s) 756
Mva1269I GAATGC 1 cut(s) 1151
MvaI CCWGG 4 cut(s) 281, 525, 976, 1439
MvnI CGCG 1 cut(s) 1293
MwoI GCNNNNNNNGC 6 cut(s) 41, 186, 338, 1074, 1148, 1299
NciI CCSGG 2 cut(s) 102, 318
NdeI CATATG 1 cut(s) 739
NdeII GATC 6 cut(s) 217, 231, 733, 828, 899, 943
NlaIII CATG 5 cut(s) 78, 348, 409, 725, 1415
NlaIV GGNNCC 2 cut(s) 355, 830
NmuCI GTSAC 2 cut(s) 112, 649
NsbI TGCGCA 1 cut(s) 1308
NspI RCATGY 1 cut(s) 348
NspV TTCGAA 1 cut(s) 538
OliI CACNNNNGTG 2 cut(s) 572, 846
PasI CCCWGGG 1 cut(s) 975
PciSI GCTCTTC 1 cut(s) 543
PctI GAATGC 1 cut(s) 1151
PfeI GAWTC 4 cut(s) 156, 174, 469, 679
PflFI GACNNNGTC 1 cut(s) 110
PflMI CCANNNNNTGG 1 cut(s) 1097
PinAI ACCGGT 1 cut(s) 1577
PkrI GCNGC 1 cut(s) 334
PleI GAGTC 4 cut(s) 201, 247, 746, 1456
PpsI GAGTC 4 cut(s) 201, 247, 746, 1456
Ppu21I YACGTR 1 cut(s) 91
PsiI TTATAA 2 cut(s) 773, 879
Psp6I CCWGG 4 cut(s) 279, 523, 974, 1437
PspGI CCWGG 4 cut(s) 279, 523, 974, 1437
PspN4I GGNNCC 2 cut(s) 355, 830
PspPI GGNCC 1 cut(s) 1575
PstNI CAGNNNCTG 2 cut(s) 159, 1271
PsuI RGATCY 4 cut(s) 231, 733, 828, 899
PsyI GACNNNGTC 1 cut(s) 110
RsaI GTAC 5 cut(s) 313, 325, 369, 1039, 1379
RsaNI GTAC 5 cut(s) 312, 324, 368, 1038, 1378
RseI CAYNNNNRTG 5 cut(s) 73, 572, 846, 1317, 1410
SapI GCTCTTC 1 cut(s) 543
SaqAI TTAA 5 cut(s) 141, 297, 308, 1164, 1487
SatI GCNGC 1 cut(s) 333
Sau3AI GATC 6 cut(s) 217, 231, 733, 828, 899, 943
Sau96I GGNCC 1 cut(s) 1575
ScaI AGTACT 1 cut(s) 313
SchI GAGTC 4 cut(s) 202, 248, 746, 1457
ScrFI CCNGG 6 cut(s) 102, 281, 318, 525, 976, 1439
SduI GDGCHC 1 cut(s) 482
SfaNI GCATC 3 cut(s) 410, 1012, 1258
SfcI CTRYAG 1 cut(s) 1279
SfuI TTCGAA 1 cut(s) 538
SinI GGWCC 1 cut(s) 1575
SmiMI CAYNNNNRTG 5 cut(s) 73, 572, 846, 1317, 1410
SmlI CTYRAG 1 cut(s) 1260
SmoI CTYRAG 1 cut(s) 1260
Sse9I AATT 4 cut(s) 500, 756, 1006, 1130
SsiI CCGC 6 cut(s) 35, 44, 66, 180, 189, 1525
SspMI CTAG 2 cut(s) 803, 1541
StyD4I CCNGG 6 cut(s) 100, 279, 316, 523, 974, 1437
StyI CCWWGG 2 cut(s) 1032, 1395
TaaI ACNGT 6 cut(s) 289, 328, 649, 845, 939, 1116
TaiI ACGT 1 cut(s) 93
TaqI TCGA 1 cut(s) 538
TasI AATT 4 cut(s) 500, 756, 1006, 1130
TatI WGTACW 2 cut(s) 311, 1377
TfiI GAWTC 4 cut(s) 156, 174, 469, 679
Tru1I TTAA 5 cut(s) 141, 297, 308, 1164, 1487
Tru9I TTAA 5 cut(s) 141, 297, 308, 1164, 1487
TscAI CASTG 5 cut(s) 294, 579, 652, 850, 1575
TseFI GTSAC 2 cut(s) 112, 649
TseI GCWGC 1 cut(s) 332
Tsp45I GTSAC 2 cut(s) 112, 649
TspDTI ATGAA 7 cut(s) 257, 452, 501, 575, 618, 756, 1187
TspGWI ACGGA 1 cut(s) 1160
TspRI CASTG 5 cut(s) 294, 579, 652, 850, 1575
Tth111I GACNNNGTC 1 cut(s) 110
Van91I CCANNNNNTGG 1 cut(s) 1097
VpaK11BI GGWCC 1 cut(s) 1575
XceI RCATGY 1 cut(s) 348
XcmI CCANNNNNNNNNTGG 2 cut(s) 67, 842
XspI CTAG 2 cut(s) 803, 1541
ZrmI AGTACT 1 cut(s) 313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.