Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009662

Physical Location & Seq

Genomic Coordinates Reverse (-)

8967394 .. 8971779

Gene Structure 4386 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00168040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGTTGGGGAGCGCTCCGATAAAGTAATAGTGGCGGTGAAGGCGGAGAAGGTGATTTCCAACACCGCATTGGCATGGGCGCTCACTCACGTAGTTCAACCCGGCGACTGCGTCACCTTGCTCGCCATCATCTCTCCCCTTAAAACTGGTAACAGATTCTGGAGATTTCCGAGATTCAGCGGAGACTGTGGGAGTCGGCACAGGGAGGATTTGCCGGATCGGATTTGTCAGATCTCCGAGTCTTGTTCTCAGATGGTGCTTCAGTTTCATAATCAAATCCAGGTAACAGTGAGGATTAAGGTAGTTTTAAGTACTCCCGGTGGTACTGTGGCAGCCGAAGCAACATGCAATGGAGCCAACTGGGTCGTACTGGACAAAAAACTGAAACAAGAGAGGAAGCATTGCATGGAGGAACTTGGATGCAACATTGTTGTAATGAACGGGTCTCAGCCTAAAGTCCTAAAGCTGAATCTGGGGTGCTCAGATGAACTCCAAACGCAATTCCTTTCTGCTGCTTCCTCACCAGGAACTCGCCTTCGAAGATTGGAAGAGCATAGGATGAATACCACTCCAGTGAGTAGTCCTGAAGAACCAAGTAGCTCCTGCACAAGAACGACAGGAGAAGGTTCATCATCAAGTTACGACACTGTGACTTCTCTTTTCCTTGTCTATGAGCGGAATCCTTTATTTGAAGGACAACAAGCGAGAAATCACAGACCACATGATTTGGAAGATCCATATGAAGAACTTGACTCAATTGGAGAAAGGCTTATAACTCTGTGTAAGCCCCAAACATCAACTCTAGCTTCTACCCAGAGTGTCTTTTGGATCCCCCAAAACCACAGTGGTGACAGAAAGCACTCCAAACCCCAAACTTATAAAAAATCACACAAAGTAAGATCTCCCACTTTCCAAACTCTATTTGACGAGTATGCACAGTTTGATCAAGATACAAGGATTGACAGAGCTGAACCCAGGGAAAACCATAACAAAGGCTACATTACTAATTCAAACATTAGGGATGCTGTTTCCTTGGGTACGTCTTCCTCAATACCTCCTCCTTTATGCTCTCTATGCCAACATAAAACACCAGTTTTTGGAAAACCTCCAAAACAGTTCTCTTACCAAGAATTAGAGGAAGCTACGGACGCATTCTCAGATGTTAACTTCTTGGCAGAAGGTGGCTTCGGTGTGGTTCATAGAGGGGTGTTGAGAGACGGCCAAGTTGTTGCCGTGAAGCAGTTGAAGTTCGGTGGTTCTCAAGCAGATGCTGATTTCTGTAGGGAAGTGCGCGTATTGAGCTGTGCACAACACAGGAATGTTGTGTTGCTCATTGGGTATTGTATTGAAGGCAAGTCAAGGTTACTGGTTTATGAGTACATCTGCAACAGCTCCTTGGATTTCCATTTACATGGCGTGGCAGGAAACAGAACTCCCCTGGATTACGAATCCAGGCTAAAGATAGCTACTGGAACTGCCCGTGGATTAAGATATCTTCATGAAGATTGCAGAGTGGGTTGTATAGTGCACAGAGACCTCAGACCGAACAATATCCTTCTGACCCACGATTTTGAACCTCTGGTTGCGGACTTTGGGCTTGCTAGATGGCACTCTGAATGGGAGACCAGCACTGAGGACCGGTGTATTGGAACTTCAGGGTACATTCTTCAAATCCTGCTAGCTATGGATCAACAATTCTTTTATCTTGCACCAGAATATATAGACAGTGGTCAAATTACACATAAGGTAGATGTGTATGCATTTGGAGTTGTTTTGTTGGAGCTTATGACAGGTCAGAGAATCGGTGAATTGCATTCTGTCAGGGGACATCATTTTTTGGAAGAATGGTTGCACCGGTTAGCTACATTAGAGCCAAACCATATCTCACCAATTTCCTATCACTTGCTGGATCCGAACATGGCCTCCGAATCCCCCGACTTTCCCTATCAACTACAGGCAATGGCTCGTGCTGCTTCCTTGTGTCTTCGTCGAGATCCTGAATTCAGACCCTCAATGTCAAAGTTAATCAGAGTACTAGAAGGAGGTGATCCAGTTGTTCCTATCGGCCTGGACTTGAACACAGTTGGTAGTAGAAGTGGCCATTTGCCTGGACTAAGCTCACAAAGACAGCCTAAACCCAGAGGAAACCACTCTCGTAAACTATCACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

723

Amino Acids

80.97

Weight (kDa)

7.01

Isoelectric Point (pI)

42.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	388 - 676	2e-35	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	391 - 678	9.1e-37	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009662)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g40540 FvH4_2g40540 FvH4_2g40540
malus_domestica	MD08G1039200.v1.1
prunus_persica	Prupe.1G386700_v2.0.a1 Prupe.1G386700_v2.0.a1 Prupe.1G386700_v2.0.a1 Prupe.1G386700_v2.0.a1 Prupe.1G386700_v2.0.a1
pyrus_communis	pycom08g03090
rosa_chinensis	RchiOBHm_Chr6g0300171
rosa_laevigata	RLG00000011361
rosa_multiflora	Rmu_sc0001670.1_g000040
rosa_roxburghii	Rroxscaffold_7G00168040
rosa_rugosa	Rorug06G0293900 Rorug06G0293900 Rorug06G0293900
rosa_samantha	Rh6AG405900 Rh6BG413900 Rh6CG421100 Rh6DG406700
rosa_wichuraiana	Rw6G035530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	773, 879
AccB7I	CCANNNNNTGG	1 cut(s)	1097
AccBSI	CCGCTC	1 cut(s)	676
AccII	CGCG	1 cut(s)	1293
AciI	CCGC	6 cut(s)	35, 44, 66, 180, 676, 1586
AclWI	GGATC	9 cut(s)	225, 728, 823, 836, 1695, 1904, 1917, 1988, 2042
AcoI	YGGCCR	2 cut(s)	1219, 2098
AcsI	RAATTY	1 cut(s)	2000
AcuI	CTGAAG	3 cut(s)	245, 606, 1638
AfaI	GTAC	7 cut(s)	313, 325, 369, 1039, 1379, 1661, 2034
AfeI	AGCGCT	1 cut(s)	14
AfiI	CCNNNNNNNGG	1 cut(s)	1097
AgeI	ACCGGT	2 cut(s)	1638, 1854
AgsI	TTSAA	8 cut(s)	98, 692, 1011, 1246, 1349, 1574, 1670, 2077
AjnI	CCWGG	7 cut(s)	279, 523, 974, 1437, 1451, 2067, 2107
AleI	CACNNNNGTG	2 cut(s)	572, 846
AloI	GAACNNNNNNTCC	2 cut(s)	1907, 1939
Alw21I	GWGCWC	3 cut(s)	482, 1309, 1530
Alw26I	GTCTC	5 cut(s)	177, 450, 1209, 1527, 1616
Alw44I	GTGCAC	2 cut(s)	1305, 1526
AlwI	GGATC	9 cut(s)	225, 728, 823, 836, 1695, 1904, 1917, 1988, 2042
AlwNI	CAGNNNCTG	2 cut(s)	159, 1271
Aor51HI	AGCGCT	1 cut(s)	14
AoxI	GGCC	4 cut(s)	1219, 1920, 2065, 2098
ApaLI	GTGCAC	2 cut(s)	1305, 1526
ApeKI	GCWGC	3 cut(s)	332, 512, 1970
ApoI	RAATTY	1 cut(s)	2000
AsiGI	ACCGGT	2 cut(s)	1638, 1854
AspLEI	GCGC	3 cut(s)	15, 82, 1293
AspS9I	GGNCC	1 cut(s)	1636
AsuC2I	CCSGG	2 cut(s)	102, 318
AsuHPI	GGTGA	8 cut(s)	49, 64, 106, 513, 860, 1817, 1878, 2057
AsuII	TTCGAA	1 cut(s)	538
AsuNHI	GCTAGC	1 cut(s)	1678
AvaII	GGWCC	1 cut(s)	1636
BaeGI	GKGCMC	2 cut(s)	1309, 1530
BalI	TGGCCA	1 cut(s)	2100
BamHI	GGATCC	2 cut(s)	828, 1909
BarI	GAAGNNNNNNTAC	2 cut(s)	1636, 1668
BauI	CACGAG	1 cut(s)	1965
BbsI	GAAGAC	2 cut(s)	1035, 1976
Bbv12I	GWGCWC	3 cut(s)	482, 1309, 1530
BbvI	GCAGC	3 cut(s)	344, 499, 1957
BccI	CCATC	3 cut(s)	134, 247, 1599
BceAI	ACGGC	2 cut(s)	1217, 1234
BciT130I	CCWGG	7 cut(s)	281, 525, 976, 1439, 1453, 2069, 2109
BclI	TGATCA	1 cut(s)	943
BcnI	CCSGG	2 cut(s)	102, 318
BcoDI	GTCTC	5 cut(s)	177, 450, 1209, 1527, 1616
BfaI	CTAG	4 cut(s)	803, 1602, 1679, 2036
BfmI	CTRYAG	2 cut(s)	1279, 1952
BfoI	RGCGCY	2 cut(s)	16, 83
BglII	AGATCT	2 cut(s)	231, 899
BisI	GCNGC	3 cut(s)	333, 513, 1971
BlsI	GCNGC	3 cut(s)	334, 514, 1972
BmcAI	AGTACT	2 cut(s)	313, 2034
Bme1390I	CCNGG	9 cut(s)	102, 281, 318, 525, 976, 1439, 1453, 2069, 2109
Bme18I	GGWCC	1 cut(s)	1636
BmgT120I	GGNCC	1 cut(s)	1636
BmiI	GGNNCC	3 cut(s)	355, 830, 1911
BmrFI	CCNGG	9 cut(s)	102, 281, 318, 525, 976, 1439, 1453, 2069, 2109
BmrI	ACTGGG	1 cut(s)	370
BmsI	GCATC	3 cut(s)	410, 1012, 1258
BmtI	GCTAGC	1 cut(s)	1682
BmuI	ACTGGG	1 cut(s)	370
BoxI	GACNNNNGTC	1 cut(s)	1728
BpiI	GAAGAC	2 cut(s)	1035, 1976
BpmI	CTGGAG	2 cut(s)	181, 555
Bpu14I	TTCGAA	1 cut(s)	538
BpuEI	CTTGAG	1 cut(s)	1245
BpuMI	CCSGG	2 cut(s)	102, 318
BsaAI	YACGTR	1 cut(s)	91
BsaI	GGTCTC	3 cut(s)	450, 1527, 1616
BsaJI	CCNNGG	6 cut(s)	974, 975, 1032, 1395, 1437, 1480
BsaWI	WCCGGW	2 cut(s)	1638, 1854
BsaXI	ACNNNNNCTCC	2 cut(s)	1907, 1937
Bsc4I	CCNNNNNNNGG	1 cut(s)	1097
Bse118I	RCCGGY	2 cut(s)	1638, 1854
Bse1I	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1474, 2051
Bse3DI	GCAATG	3 cut(s)	355, 400, 1965
BseBI	CCWGG	7 cut(s)	281, 525, 976, 1439, 1453, 2069, 2109
BseDI	CCNNGG	6 cut(s)	974, 975, 1032, 1395, 1437, 1480
BseGI	GGATG	3 cut(s)	425, 564, 1027
BseLI	CCNNNNNNNGG	1 cut(s)	1097
BseMI	GCAATG	3 cut(s)	355, 400, 1965
BseMII	CTCAG	6 cut(s)	263, 461, 495, 1170, 1552, 1623
BseNI	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1474, 2051
BseRI	GAGGAG	1 cut(s)	1047
BseSI	GKGCMC	2 cut(s)	1309, 1530
BseXI	GCAGC	3 cut(s)	344, 499, 1957
BsgI	GTGCAG	1 cut(s)	589
Bsh1236I	CGCG	1 cut(s)	1293
BshFI	GGCC	4 cut(s)	1221, 1922, 2067, 2100
BshTI	ACCGGT	2 cut(s)	1638, 1854
BsiHKAI	GWGCWC	3 cut(s)	482, 1309, 1530
BsiSI	CCGG	5 cut(s)	102, 215, 318, 1639, 1855
BslFI	GGGAC	1 cut(s)	1839
BslI	CCNNNNNNNGG	1 cut(s)	1097
BsmAI	GTCTC	5 cut(s)	177, 450, 1209, 1527, 1616
BsmBI	CGTCTC	1 cut(s)	1209
BsmFI	GGGAC	1 cut(s)	1839
BsmI	GAATGC	2 cut(s)	1151, 1813
BsnI	GGCC	4 cut(s)	1221, 1922, 2067, 2100
Bso31I	GGTCTC	3 cut(s)	450, 1527, 1616
Bsp119I	TTCGAA	1 cut(s)	538
Bsp1286I	GDGCHC	3 cut(s)	482, 1309, 1530
BspACI	CCGC	6 cut(s)	35, 44, 66, 180, 676, 1586
BspANI	GGCC	4 cut(s)	1221, 1922, 2067, 2100
BspCNI	CTCAG	6 cut(s)	262, 460, 494, 1169, 1551, 1624
BspFNI	CGCG	1 cut(s)	1293
BspHI	TCATGA	1 cut(s)	1498
BspLI	GGNNCC	3 cut(s)	355, 830, 1911
BspOI	GCTAGC	1 cut(s)	1682
BspPI	GGATC	9 cut(s)	225, 728, 823, 836, 1695, 1904, 1917, 1988, 2042
BspQI	GCTCTTC	1 cut(s)	543
BspT104I	TTCGAA	1 cut(s)	538
BspTNI	GGTCTC	3 cut(s)	450, 1527, 1616
BsrBI	CCGCTC	1 cut(s)	676
BsrDI	GCAATG	3 cut(s)	355, 400, 1965
BsrFI	RCCGGY	2 cut(s)	1638, 1854
BsrI	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1474, 2051
BssAI	RCCGGY	2 cut(s)	1638, 1854
BssECI	CCNNGG	6 cut(s)	974, 975, 1032, 1395, 1437, 1480
BssSI	CACGAG	1 cut(s)	1965
BssT1I	CCWWGG	2 cut(s)	1032, 1395
Bst2BI	CACGAG	1 cut(s)	1965
Bst2UI	CCWGG	7 cut(s)	281, 525, 976, 1439, 1453, 2069, 2109
Bst4CI	ACNGT	9 cut(s)	188, 289, 328, 649, 845, 939, 1116, 1727, 2083
Bst6I	CTCTTC	1 cut(s)	543
BstBAI	YACGTR	1 cut(s)	91
BstBI	TTCGAA	1 cut(s)	538
BstC8I	GCNNGC	3 cut(s)	123, 1599, 1680
BstDEI	CTNAG	7 cut(s)	249, 447, 481, 1156, 1538, 1632, 2114
BstDSI	CCRYGG	1 cut(s)	1480
BstF5I	GGATG	3 cut(s)	425, 564, 1027
BstFNI	CGCG	1 cut(s)	1293
BstH2I	RGCGCY	2 cut(s)	16, 83
BstHHI	GCGC	3 cut(s)	15, 82, 1293
BstMAI	GTCTC	5 cut(s)	177, 450, 1209, 1527, 1616
BstMWI	GCNNNNNNNGC	6 cut(s)	41, 338, 1074, 1148, 1299, 1970
BstNI	CCWGG	7 cut(s)	281, 525, 976, 1439, 1453, 2069, 2109
BstNSI	RCATGY	1 cut(s)	348
BstPAI	GACNNNNGTC	1 cut(s)	1728
BstSCI	CCNGG	9 cut(s)	100, 279, 316, 523, 974, 1437, 1451, 2067, 2107
BstSFI	CTRYAG	2 cut(s)	1279, 1952
BstSLI	GKGCMC	2 cut(s)	1309, 1530
BstUI	CGCG	1 cut(s)	1293
BstV1I	GCAGC	3 cut(s)	344, 499, 1957
BstV2I	GAAGAC	2 cut(s)	1035, 1976
BstX2I	RGATCY	6 cut(s)	231, 733, 828, 899, 1909, 1993
BstXI	CCANNNNNNTGG	2 cut(s)	1412, 2108
BstYI	RGATCY	6 cut(s)	231, 733, 828, 899, 1909, 1993
BsuRI	GGCC	4 cut(s)	1221, 1922, 2067, 2100
BtgI	CCRYGG	1 cut(s)	1480
BtsCI	GGATG	3 cut(s)	425, 564, 1027
BtsIMutI	CAGTG	6 cut(s)	294, 579, 645, 850, 1629, 1732
Cac8I	GCNNGC	3 cut(s)	123, 1599, 1680
CaiI	CAGNNNCTG	2 cut(s)	159, 1271
CciI	TCATGA	1 cut(s)	1498
CfoI	GCGC	3 cut(s)	15, 82, 1293
Cfr10I	RCCGGY	2 cut(s)	1638, 1854
Cfr13I	GGNCC	1 cut(s)	1636
CseI	GACGC	2 cut(s)	100, 1157
Csp6I	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1660, 2033
CspAI	ACCGGT	2 cut(s)	1638, 1854
CspCI	CAANNNNNGTGG	2 cut(s)	708, 743
CviAII	CATG	7 cut(s)	75, 345, 406, 722, 1412, 1499, 1918
CviQI	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1660, 2033
DdeI	CTNAG	7 cut(s)	249, 447, 481, 1156, 1538, 1632, 2114
EaeI	YGGCCR	2 cut(s)	1219, 2098
Eam1104I	CTCTTC	1 cut(s)	543
EarI	CTCTTC	1 cut(s)	543
EciI	GGCGGA	1 cut(s)	59
Eco130I	CCWWGG	2 cut(s)	1032, 1395
Eco31I	GGTCTC	3 cut(s)	450, 1527, 1616
Eco32I	GATATC	1 cut(s)	1493
Eco47I	GGWCC	1 cut(s)	1636
Eco47III	AGCGCT	1 cut(s)	14
Eco57I	CTGAAG	3 cut(s)	245, 606, 1638
EcoRI	GAATTC	1 cut(s)	2000
EcoRII	CCWGG	7 cut(s)	279, 523, 974, 1437, 1451, 2067, 2107
EcoRV	GATATC	1 cut(s)	1493
EcoT14I	CCWWGG	2 cut(s)	1032, 1395
EcoT22I	ATGCAT	1 cut(s)	1762
ErhI	CCWWGG	2 cut(s)	1032, 1395
Esp3I	CGTCTC	1 cut(s)	1209
FaeI	CATG	7 cut(s)	78, 348, 409, 725, 1415, 1502, 1921
FaqI	GGGAC	1 cut(s)	1839
FatI	CATG	7 cut(s)	74, 344, 405, 721, 1411, 1498, 1917
FauNDI	CATATG	1 cut(s)	739
FbaI	TGATCA	1 cut(s)	943
Fnu4HI	GCNGC	3 cut(s)	333, 513, 1971
FokI	GGATG	3 cut(s)	432, 571, 1034
Fsp4HI	GCNGC	3 cut(s)	333, 513, 1971
FspBI	CTAG	4 cut(s)	803, 1602, 1679, 2036
GlaI	GCGC	3 cut(s)	14, 81, 1292
GluI	GCNGC	3 cut(s)	333, 513, 1971
GsuI	CTGGAG	2 cut(s)	181, 555
HaeII	RGCGCY	2 cut(s)	16, 83
HaeIII	GGCC	4 cut(s)	1221, 1922, 2067, 2100
HapII	CCGG	5 cut(s)	102, 215, 318, 1639, 1855
HgaI	GACGC	2 cut(s)	100, 1157
HhaI	GCGC	3 cut(s)	15, 82, 1293
Hin1II	CATG	7 cut(s)	78, 348, 409, 725, 1415, 1502, 1921
Hin6I	GCGC	3 cut(s)	13, 80, 1291
HinP1I	GCGC	3 cut(s)	13, 80, 1291
HincII	GTYRAC	1 cut(s)	1165
HindII	GTYRAC	1 cut(s)	1165
HpaI	GTTAAC	1 cut(s)	1165
HpaII	CCGG	5 cut(s)	102, 215, 318, 1639, 1855
HphI	GGTGA	8 cut(s)	49, 64, 106, 513, 860, 1817, 1878, 2057
Hpy166II	GTNNAC	4 cut(s)	1165, 1307, 1528, 2159
Hpy188III	TCNNGA	6 cut(s)	160, 584, 947, 1499, 1991, 1997
Hpy8I	GTNNAC	4 cut(s)	1165, 1307, 1528, 2159
Hpy99I	CGWCG	1 cut(s)	1992
HpyAV	CCTTC	9 cut(s)	34, 43, 545, 617, 686, 1172, 1343, 1565, 2033
HpyCH4III	ACNGT	9 cut(s)	188, 289, 328, 649, 845, 939, 1116, 1727, 2083
HpyCH4IV	ACGT	2 cut(s)	90, 1040
HpyF10VI	GCNNNNNNNGC	6 cut(s)	41, 338, 1074, 1148, 1299, 1970
HpyF3I	CTNAG	7 cut(s)	249, 447, 481, 1156, 1538, 1632, 2114
HpySE526I	ACGT	2 cut(s)	90, 1040
Hsp92II	CATG	7 cut(s)	78, 348, 409, 725, 1415, 1502, 1921
HspAI	GCGC	3 cut(s)	13, 80, 1291
Ksp22I	TGATCA	1 cut(s)	943
KspAI	GTTAAC	1 cut(s)	1165
LguI	GCTCTTC	1 cut(s)	543
LmnI	GCTCC	6 cut(s)	10, 20, 353, 605, 1397, 1780
Lsp1109I	GCAGC	3 cut(s)	344, 499, 1957
LweI	GCATC	3 cut(s)	410, 1012, 1258
MaeI	CTAG	4 cut(s)	803, 1602, 1679, 2036
MaeII	ACGT	2 cut(s)	90, 1040
MaeIII	GTNAC	7 cut(s)	112, 149, 283, 638, 649, 848, 1362
MbiI	CCGCTC	1 cut(s)	676
MfeI	CAATTG	1 cut(s)	756
MflI	RGATCY	6 cut(s)	231, 733, 828, 899, 1909, 1993
MhlI	GDGCHC	3 cut(s)	482, 1309, 1530
MlsI	TGGCCA	1 cut(s)	2100
MluCI	AATT	9 cut(s)	500, 756, 1006, 1130, 1694, 1734, 1808, 1890, 2000
MluNI	TGGCCA	1 cut(s)	2100
MlyI	GAGTC	3 cut(s)	202, 248, 746
MmeI	TCCRAC	2 cut(s)	84, 1758
Mox20I	TGGCCA	1 cut(s)	2100
Mph1103I	ATGCAT	1 cut(s)	1762
MscI	TGGCCA	1 cut(s)	2100
MseI	TTAA	6 cut(s)	141, 297, 308, 1164, 1487, 2024
MslI	CAYNNNNRTG	5 cut(s)	73, 572, 846, 1317, 1410
Msp20I	TGGCCA	1 cut(s)	2100
MspA1I	CMGCKG	1 cut(s)	180
MspI	CCGG	5 cut(s)	102, 215, 318, 1639, 1855
MspR9I	CCNGG	9 cut(s)	102, 281, 318, 525, 976, 1439, 1453, 2069, 2109
MunI	CAATTG	1 cut(s)	756
Mva1269I	GAATGC	2 cut(s)	1151, 1813
MvaI	CCWGG	7 cut(s)	281, 525, 976, 1439, 1453, 2069, 2109
MvnI	CGCG	1 cut(s)	1293
MwoI	GCNNNNNNNGC	6 cut(s)	41, 338, 1074, 1148, 1299, 1970
NciI	CCSGG	2 cut(s)	102, 318
NdeI	CATATG	1 cut(s)	739
NheI	GCTAGC	1 cut(s)	1678
NlaIII	CATG	7 cut(s)	78, 348, 409, 725, 1415, 1502, 1921
NlaIV	GGNNCC	3 cut(s)	355, 830, 1911
NmuCI	GTSAC	3 cut(s)	112, 649, 848
NsiI	ATGCAT	1 cut(s)	1762
NspI	RCATGY	1 cut(s)	348
NspV	TTCGAA	1 cut(s)	538
OliI	CACNNNNGTG	2 cut(s)	572, 846
PagI	TCATGA	1 cut(s)	1498
PasI	CCCWGGG	1 cut(s)	975
PciSI	GCTCTTC	1 cut(s)	543
PctI	GAATGC	2 cut(s)	1151, 1813
PfeI	GAWTC	7 cut(s)	156, 174, 469, 679, 1448, 1800, 1928
PflFI	GACNNNGTC	1 cut(s)	110
PflMI	CCANNNNNTGG	1 cut(s)	1097
PinAI	ACCGGT	2 cut(s)	1638, 1854
PkrI	GCNGC	3 cut(s)	334, 514, 1972
PleI	GAGTC	3 cut(s)	201, 247, 746
PpsI	GAGTC	3 cut(s)	201, 247, 746
Ppu21I	YACGTR	1 cut(s)	91
PshAI	GACNNNNGTC	1 cut(s)	1728
PsiI	TTATAA	2 cut(s)	773, 879
Psp6I	CCWGG	7 cut(s)	279, 523, 974, 1437, 1451, 2067, 2107
PspGI	CCWGG	7 cut(s)	279, 523, 974, 1437, 1451, 2067, 2107
PspN4I	GGNNCC	3 cut(s)	355, 830, 1911
PspPI	GGNCC	1 cut(s)	1636
PstNI	CAGNNNCTG	2 cut(s)	159, 1271
PsuI	RGATCY	6 cut(s)	231, 733, 828, 899, 1909, 1993
PsyI	GACNNNGTC	1 cut(s)	110
RsaI	GTAC	7 cut(s)	313, 325, 369, 1039, 1379, 1661, 2034
RsaNI	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1660, 2033
RseI	CAYNNNNRTG	5 cut(s)	73, 572, 846, 1317, 1410
SapI	GCTCTTC	1 cut(s)	543
SaqAI	TTAA	6 cut(s)	141, 297, 308, 1164, 1487, 2024
SatI	GCNGC	3 cut(s)	333, 513, 1971
Sau96I	GGNCC	1 cut(s)	1636
ScaI	AGTACT	2 cut(s)	313, 2034
SchI	GAGTC	3 cut(s)	202, 248, 746
ScrFI	CCNGG	9 cut(s)	102, 281, 318, 525, 976, 1439, 1453, 2069, 2109
SduI	GDGCHC	3 cut(s)	482, 1309, 1530
SfaNI	GCATC	3 cut(s)	410, 1012, 1258
SfcI	CTRYAG	2 cut(s)	1279, 1952
SfuI	TTCGAA	1 cut(s)	538
SinI	GGWCC	1 cut(s)	1636
SmiMI	CAYNNNNRTG	5 cut(s)	73, 572, 846, 1317, 1410
SmlI	CTYRAG	1 cut(s)	1260
SmoI	CTYRAG	1 cut(s)	1260
Sse9I	AATT	9 cut(s)	500, 756, 1006, 1130, 1694, 1734, 1808, 1890, 2000
SsiI	CCGC	6 cut(s)	35, 44, 66, 180, 676, 1586
SspMI	CTAG	4 cut(s)	803, 1602, 1679, 2036
StyD4I	CCNGG	9 cut(s)	100, 279, 316, 523, 974, 1437, 1451, 2067, 2107
StyI	CCWWGG	2 cut(s)	1032, 1395
TaaI	ACNGT	9 cut(s)	188, 289, 328, 649, 845, 939, 1116, 1727, 2083
TaiI	ACGT	2 cut(s)	93, 1043
TaqI	TCGA	2 cut(s)	538, 1990
TaqII	GACCGA	1 cut(s)	1558
TasI	AATT	9 cut(s)	500, 756, 1006, 1130, 1694, 1734, 1808, 1890, 2000
TatI	WGTACW	3 cut(s)	311, 1377, 2032
TfiI	GAWTC	7 cut(s)	156, 174, 469, 679, 1448, 1800, 1928
Tru1I	TTAA	6 cut(s)	141, 297, 308, 1164, 1487, 2024
Tru9I	TTAA	6 cut(s)	141, 297, 308, 1164, 1487, 2024
TscAI	CASTG	6 cut(s)	294, 579, 652, 850, 1636, 1732
TseFI	GTSAC	3 cut(s)	112, 649, 848
TseI	GCWGC	3 cut(s)	332, 512, 1970
Tsp45I	GTSAC	3 cut(s)	112, 649, 848
TspDTI	ATGAA	9 cut(s)	257, 452, 501, 575, 618, 756, 1187, 1487, 1515
TspGWI	ACGGA	1 cut(s)	1160
TspRI	CASTG	6 cut(s)	294, 579, 652, 850, 1636, 1732
Tth111I	GACNNNGTC	1 cut(s)	110
Van91I	CCANNNNNTGG	1 cut(s)	1097
VneI	GTGCAC	2 cut(s)	1305, 1526
VpaK11BI	GGWCC	1 cut(s)	1636
XapI	RAATTY	1 cut(s)	2000
XceI	RCATGY	1 cut(s)	348
XcmI	CCANNNNNNNNNTGG	2 cut(s)	67, 842
XspI	CTAG	4 cut(s)	803, 1602, 1679, 2036
ZrmI	AGTACT	2 cut(s)	313, 2034
Zsp2I	ATGCAT	1 cut(s)	1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.