Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0009662

Physical Location & Seq

Genomic Coordinates Forward (+)

60355951 .. 60359993

Gene Structure 4043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG405900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGTTGGGGAGCGCTCCGATAAAGTAATAGTGGCGGTGAAGGCGGAGAAGGTGATTTCCAACACCGCATTGGCATGGGCGCTCACTCACGTAGTTCAACCCGGCGACTGCGTCACCTTGCTCGCCATCATCTCTCCCCTTAAAACTGGTAACAGATTCTGGAGATTTCCGAGATTCAGCGGAGACTGCGGGAGTCGGCACAGGGAGGATTTGCCGGATCGGATTTGTCAGATCTCCGAGTCTTGTTCTCAGATGGTGCTTCAGTTTCATAATCAAATCCAGGCAACAGTGAGGATTAAGGTAGTTTTAAGTACTCCCGGTGGTACTGTGGCAGCCGAAGCAACATGCAATGGAGCCAACTGGGTCGTACTGGACAAAAAACTGAAACAAGAGAGGAAGCATTGCATGGAGGAACTTGGATGCAACATTGTTGTAATGAACGGGTCTCAGCCTAAAGTCCTAAAGCTGAATCTGGGGTGCTCAGATGAACTCCAAACCCAATTCTTTTCTGTTGCTTCCTCACCAGGAACTCGCCTTCGAAGATTGGAAGAGCATAGGATGAATACCACTCCAGTGAGTAGTCCTGAAGAACCAAGTAGCTCCTGCACAAGAACGACAGGAGAAGGTTCATCATCAAGTTACGACACTGTGACTTCTCTTTTCCTTGTCTATGAGCAGAATCCTTTATTTGAAGGACAACAAGCGAGAAATCACAGACCACATGATTTGGAAGATCCATATGAAGAACTTGACTCAATTGGAGAAAGGCTTATAACTCTGTGTAAGCCCCAAACATCAACTCTAGCTTCTACGCAGAGTGTCTTTTGGATCCCCCAAAACCACAGTGGTGGTAGAAAGCACTCCAAACCCCAAGCTTATAAAAAATCACACAAAGTAAGATCTCCCACTTTCCAAACTCTATTTGACGAGTATGCACAGTTTGATCAAGATACAAGGATTGACAGAGCTGAACCCAGGGGAAACCATAACAAAGGCTACATTACTAATTCAAACATTAGGGATGCTGTTTCCTTGGGTACATCTTCCTCAATACCTCCTCCTTTATGCTCTCTATGCCAACATAAAACACCAGTTTTTGGAAAACCTCCAAAACAGTTCTCTTACCAAGAATTAGAGGAAGCTACGGACGCATTCTCAGATGTTAACTTCTTGGCAGAAGGTGGCTTCGGTGTGGTTCATAGAGGGGTGTTGAGAGACGGCCAAGTTGTTGCCGTGAAGCAGTTGAAGTTTGGTGGTTCTCAAGCAGATGCTGATTTCTGTAGGGAAGTGCGCGTATTGAGCTGTGCACAACACAGGAATGTTGTGTTGCTCATTGGGTATTGTATTGAAGGCAAGTCAAGGTTACTGGTTTATGAGTACATCTGCAACAGCTCCTTGGATTTCCATTTACATGGTGTGGCAGGAAACAGAACTCCCCTGGATTACGAGTCAAGGCTAAAGATAGCTACTGGAACTGCTCGTGGATTAAGATATCTTCATGAAGATTGCAGAGTGGGTTGTATAGTGCACAGAGACCTCAGACCGAACAATATCCTTCTGACCCATGATTTTGAACCTCTGGTTGCGGACTTTGGGCTTGCTAGATGGCACTCTGAATGGGAGACCAACACTGAGGACCGGTGTATTGGAACTTCAGGGTATCTTGCACCAGAATATATAGAGAGTGGTCAAATTACACATAAGGTAGATGTGTACGCATTTGGAGTTGTTTTGTTGGAGCTTATGACAGGTCGGAGAATCGGTGAATTGCATTATGTCAGGGGACATCATTTTTTGGAAGAATGGTTGCACCGGTTAGCTACATTAGAGCCAAACCATATCTCACCAATTTCCTATCACTTGCTGGATCCAAACATGGCCTCCGAATCCCCCGACTTTCCCTATCAACTACAGGCAATGGCTCGTGCTGCTTCCTTGTGTCTTCGTCGAGATCCAGAATTCAGACCCTCAATGTCAAAGTTAATCAGAGTACTAGAAGGAGGTGATCCAGTTGTTCCTATTGGCTTGGACTTGAACACAGTTGGTAGTAGAAGTGGCCATTTGCCTGGACTAAGCTCACAAAGGCAGCCTAAACCCAGAGGAAACCACTCTCGTAAACTTTCACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

709

Amino Acids

79.24

Weight (kDa)

7.6

Isoelectric Point (pI)

43.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	388 - 662	1.3e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	391 - 664	2.7e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009662)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g40540 FvH4_2g40540 FvH4_2g40540
malus_domestica	MD08G1039200.v1.1
prunus_persica	Prupe.1G386700_v2.0.a1 Prupe.1G386700_v2.0.a1 Prupe.1G386700_v2.0.a1 Prupe.1G386700_v2.0.a1 Prupe.1G386700_v2.0.a1
pyrus_communis	pycom08g03090
rosa_chinensis	RchiOBHm_Chr6g0300171
rosa_laevigata	RLG00000011361
rosa_multiflora	Rmu_sc0001670.1_g000040
rosa_roxburghii	Rroxscaffold_7G00168040
rosa_rugosa	Rorug06G0293900 Rorug06G0293900 Rorug06G0293900
rosa_samantha	Rh6AG405900 Rh6BG413900 Rh6CG421100 Rh6DG406700
rosa_wichuraiana	Rw6G035530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	773, 879
AccB7I	CCANNNNNTGG	1 cut(s)	1097
AccII	CGCG	1 cut(s)	1293
AciI	CCGC	6 cut(s)	35, 44, 66, 180, 189, 1586
AclWI	GGATC	8 cut(s)	225, 728, 823, 836, 1862, 1875, 1946, 2000
AcoI	YGGCCR	2 cut(s)	1219, 2056
AcsI	RAATTY	1 cut(s)	1958
AcuI	CTGAAG	3 cut(s)	245, 606, 1638
AfaI	GTAC	7 cut(s)	313, 325, 369, 1039, 1379, 1715, 1992
AfeI	AGCGCT	1 cut(s)	14
AfiI	CCNNNNNNNGG	1 cut(s)	1097
AgeI	ACCGGT	2 cut(s)	1638, 1812
AgsI	TTSAA	7 cut(s)	98, 692, 1011, 1246, 1349, 1574, 2035
AjnI	CCWGG	5 cut(s)	279, 523, 974, 1437, 2065
AleI	CACNNNNGTG	2 cut(s)	572, 846
Alw21I	GWGCWC	3 cut(s)	482, 1309, 1530
Alw26I	GTCTC	5 cut(s)	177, 450, 1209, 1527, 1616
Alw44I	GTGCAC	2 cut(s)	1305, 1526
AlwI	GGATC	8 cut(s)	225, 728, 823, 836, 1862, 1875, 1946, 2000
AlwNI	CAGNNNCTG	2 cut(s)	159, 1271
Aor51HI	AGCGCT	1 cut(s)	14
AoxI	GGCC	3 cut(s)	1219, 1878, 2056
ApaLI	GTGCAC	2 cut(s)	1305, 1526
ApeKI	GCWGC	3 cut(s)	332, 1928, 2086
ApoI	RAATTY	1 cut(s)	1958
AsiGI	ACCGGT	2 cut(s)	1638, 1812
AspLEI	GCGC	3 cut(s)	15, 82, 1293
AspS9I	GGNCC	1 cut(s)	1636
AsuC2I	CCSGG	2 cut(s)	102, 318
AsuHPI	GGTGA	7 cut(s)	49, 64, 106, 513, 1775, 1836, 2015
AsuII	TTCGAA	1 cut(s)	538
AvaII	GGWCC	1 cut(s)	1636
BaeGI	GKGCMC	2 cut(s)	1309, 1530
BalI	TGGCCA	1 cut(s)	2058
BamHI	GGATCC	2 cut(s)	828, 1867
BarI	GAAGNNNNNNTAC	2 cut(s)	1636, 1668
BauI	CACGAG	2 cut(s)	1479, 1923
BbsI	GAAGAC	1 cut(s)	1934
Bbv12I	GWGCWC	3 cut(s)	482, 1309, 1530
BbvI	GCAGC	3 cut(s)	344, 1915, 2098
BccI	CCATC	3 cut(s)	134, 247, 1599
BceAI	ACGGC	2 cut(s)	1217, 1234
BciT130I	CCWGG	5 cut(s)	281, 525, 976, 1439, 2067
BclI	TGATCA	1 cut(s)	943
BcnI	CCSGG	2 cut(s)	102, 318
BcoDI	GTCTC	5 cut(s)	177, 450, 1209, 1527, 1616
BfaI	CTAG	3 cut(s)	803, 1602, 1994
BfmI	CTRYAG	2 cut(s)	1279, 1910
BfoI	RGCGCY	2 cut(s)	16, 83
BglII	AGATCT	2 cut(s)	231, 899
BisI	GCNGC	3 cut(s)	333, 1929, 2087
BlsI	GCNGC	3 cut(s)	334, 1930, 2088
BmcAI	AGTACT	2 cut(s)	313, 1992
Bme1390I	CCNGG	7 cut(s)	102, 281, 318, 525, 976, 1439, 2067
Bme18I	GGWCC	1 cut(s)	1636
BmgT120I	GGNCC	1 cut(s)	1636
BmiI	GGNNCC	3 cut(s)	355, 830, 1869
BmrFI	CCNGG	7 cut(s)	102, 281, 318, 525, 976, 1439, 2067
BmrI	ACTGGG	1 cut(s)	370
BmsI	GCATC	3 cut(s)	410, 1012, 1258
BmuI	ACTGGG	1 cut(s)	370
BpiI	GAAGAC	1 cut(s)	1934
BpmI	CTGGAG	2 cut(s)	181, 555
Bpu14I	TTCGAA	1 cut(s)	538
BpuEI	CTTGAG	1 cut(s)	1245
BpuMI	CCSGG	2 cut(s)	102, 318
BsaAI	YACGTR	1 cut(s)	91
BsaI	GGTCTC	3 cut(s)	450, 1527, 1616
BsaJI	CCNNGG	5 cut(s)	974, 975, 1032, 1395, 1437
BsaWI	WCCGGW	2 cut(s)	1638, 1812
BsaXI	ACNNNNNCTCC	4 cut(s)	1747, 1777, 1865, 1895
Bsc4I	CCNNNNNNNGG	1 cut(s)	1097
Bse118I	RCCGGY	2 cut(s)	1638, 1812
Bse1I	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1474, 2009
Bse3DI	GCAATG	3 cut(s)	355, 400, 1923
BseBI	CCWGG	5 cut(s)	281, 525, 976, 1439, 2067
BseDI	CCNNGG	5 cut(s)	974, 975, 1032, 1395, 1437
BseGI	GGATG	3 cut(s)	425, 564, 1027
BseLI	CCNNNNNNNGG	1 cut(s)	1097
BseMI	GCAATG	3 cut(s)	355, 400, 1923
BseMII	CTCAG	6 cut(s)	263, 461, 495, 1170, 1552, 1623
BseNI	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1474, 2009
BseRI	GAGGAG	1 cut(s)	1047
BseSI	GKGCMC	2 cut(s)	1309, 1530
BseXI	GCAGC	3 cut(s)	344, 1915, 2098
BsgI	GTGCAG	1 cut(s)	589
Bsh1236I	CGCG	1 cut(s)	1293
BshFI	GGCC	3 cut(s)	1221, 1880, 2058
BshTI	ACCGGT	2 cut(s)	1638, 1812
BsiHKAI	GWGCWC	3 cut(s)	482, 1309, 1530
BsiSI	CCGG	5 cut(s)	102, 215, 318, 1639, 1813
BslFI	GGGAC	1 cut(s)	1797
BslI	CCNNNNNNNGG	1 cut(s)	1097
BsmAI	GTCTC	5 cut(s)	177, 450, 1209, 1527, 1616
BsmBI	CGTCTC	1 cut(s)	1209
BsmFI	GGGAC	1 cut(s)	1797
BsmI	GAATGC	1 cut(s)	1151
BsnI	GGCC	3 cut(s)	1221, 1880, 2058
Bso31I	GGTCTC	3 cut(s)	450, 1527, 1616
Bsp119I	TTCGAA	1 cut(s)	538
Bsp1286I	GDGCHC	3 cut(s)	482, 1309, 1530
Bsp143I	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1867, 1951, 2005
BspACI	CCGC	6 cut(s)	35, 44, 66, 180, 189, 1586
BspANI	GGCC	3 cut(s)	1221, 1880, 2058
BspCNI	CTCAG	6 cut(s)	262, 460, 494, 1169, 1551, 1624
BspFNI	CGCG	1 cut(s)	1293
BspHI	TCATGA	1 cut(s)	1498
BspLI	GGNNCC	3 cut(s)	355, 830, 1869
BspPI	GGATC	8 cut(s)	225, 728, 823, 836, 1862, 1875, 1946, 2000
BspQI	GCTCTTC	1 cut(s)	543
BspT104I	TTCGAA	1 cut(s)	538
BspTNI	GGTCTC	3 cut(s)	450, 1527, 1616
BsrDI	GCAATG	3 cut(s)	355, 400, 1923
BsrFI	RCCGGY	2 cut(s)	1638, 1812
BsrI	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1474, 2009
BssAI	RCCGGY	2 cut(s)	1638, 1812
BssECI	CCNNGG	5 cut(s)	974, 975, 1032, 1395, 1437
BssMI	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1867, 1951, 2005
BssSI	CACGAG	2 cut(s)	1479, 1923
BssT1I	CCWWGG	2 cut(s)	1032, 1395
Bst2BI	CACGAG	2 cut(s)	1479, 1923
Bst2UI	CCWGG	5 cut(s)	281, 525, 976, 1439, 2067
Bst4CI	ACNGT	7 cut(s)	289, 328, 649, 845, 939, 1116, 2041
Bst6I	CTCTTC	1 cut(s)	543
BstBAI	YACGTR	1 cut(s)	91
BstBI	TTCGAA	1 cut(s)	538
BstC8I	GCNNGC	2 cut(s)	123, 1599
BstDEI	CTNAG	7 cut(s)	249, 447, 481, 1156, 1538, 1632, 2072
BstF5I	GGATG	3 cut(s)	425, 564, 1027
BstFNI	CGCG	1 cut(s)	1293
BstH2I	RGCGCY	2 cut(s)	16, 83
BstHHI	GCGC	3 cut(s)	15, 82, 1293
BstKTI	GATC	9 cut(s)	220, 234, 736, 831, 902, 946, 1870, 1954, 2008
BstMAI	GTCTC	5 cut(s)	177, 450, 1209, 1527, 1616
BstMBI	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1867, 1951, 2005
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 186, 338, 1074, 1148, 1299, 1928
BstNI	CCWGG	5 cut(s)	281, 525, 976, 1439, 2067
BstNSI	RCATGY	1 cut(s)	348
BstSCI	CCNGG	7 cut(s)	100, 279, 316, 523, 974, 1437, 2065
BstSFI	CTRYAG	2 cut(s)	1279, 1910
BstSLI	GKGCMC	2 cut(s)	1309, 1530
BstUI	CGCG	1 cut(s)	1293
BstV1I	GCAGC	3 cut(s)	344, 1915, 2098
BstV2I	GAAGAC	1 cut(s)	1934
BstX2I	RGATCY	6 cut(s)	231, 733, 828, 899, 1867, 1951
BstXI	CCANNNNNNTGG	3 cut(s)	848, 1412, 2066
BstYI	RGATCY	6 cut(s)	231, 733, 828, 899, 1867, 1951
BsuRI	GGCC	3 cut(s)	1221, 1880, 2058
BtsCI	GGATG	3 cut(s)	425, 564, 1027
BtsIMutI	CAGTG	5 cut(s)	294, 579, 645, 850, 1629
Cac8I	GCNNGC	2 cut(s)	123, 1599
CaiI	CAGNNNCTG	2 cut(s)	159, 1271
CciI	TCATGA	1 cut(s)	1498
CfoI	GCGC	3 cut(s)	15, 82, 1293
Cfr10I	RCCGGY	2 cut(s)	1638, 1812
Cfr13I	GGNCC	1 cut(s)	1636
CseI	GACGC	2 cut(s)	100, 1157
Csp6I	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1714, 1991
CspAI	ACCGGT	2 cut(s)	1638, 1812
CspCI	CAANNNNNGTGG	2 cut(s)	708, 743
CviAII	CATG	8 cut(s)	75, 345, 406, 722, 1412, 1499, 1565, 1876
CviQI	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1714, 1991
DdeI	CTNAG	7 cut(s)	249, 447, 481, 1156, 1538, 1632, 2072
DpnI	GATC	9 cut(s)	219, 233, 735, 830, 901, 945, 1869, 1953, 2007
DpnII	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1867, 1951, 2005
EaeI	YGGCCR	2 cut(s)	1219, 2056
Eam1104I	CTCTTC	1 cut(s)	543
EarI	CTCTTC	1 cut(s)	543
EciI	GGCGGA	1 cut(s)	59
Eco130I	CCWWGG	2 cut(s)	1032, 1395
Eco31I	GGTCTC	3 cut(s)	450, 1527, 1616
Eco32I	GATATC	1 cut(s)	1493
Eco47I	GGWCC	1 cut(s)	1636
Eco47III	AGCGCT	1 cut(s)	14
Eco57I	CTGAAG	3 cut(s)	245, 606, 1638
EcoRI	GAATTC	1 cut(s)	1958
EcoRII	CCWGG	5 cut(s)	279, 523, 974, 1437, 2065
EcoRV	GATATC	1 cut(s)	1493
EcoT14I	CCWWGG	2 cut(s)	1032, 1395
ErhI	CCWWGG	2 cut(s)	1032, 1395
Esp3I	CGTCTC	1 cut(s)	1209
FaeI	CATG	8 cut(s)	78, 348, 409, 725, 1415, 1502, 1568, 1879
FaqI	GGGAC	1 cut(s)	1797
FatI	CATG	8 cut(s)	74, 344, 405, 721, 1411, 1498, 1564, 1875
FauI	CCCGC	1 cut(s)	182
FauNDI	CATATG	1 cut(s)	739
FbaI	TGATCA	1 cut(s)	943
Fnu4HI	GCNGC	3 cut(s)	333, 1929, 2087
FokI	GGATG	3 cut(s)	432, 571, 1034
Fsp4HI	GCNGC	3 cut(s)	333, 1929, 2087
FspBI	CTAG	3 cut(s)	803, 1602, 1994
GlaI	GCGC	3 cut(s)	14, 81, 1292
GluI	GCNGC	3 cut(s)	333, 1929, 2087
GsuI	CTGGAG	2 cut(s)	181, 555
HaeII	RGCGCY	2 cut(s)	16, 83
HaeIII	GGCC	3 cut(s)	1221, 1880, 2058
HapII	CCGG	5 cut(s)	102, 215, 318, 1639, 1813
HgaI	GACGC	2 cut(s)	100, 1157
HhaI	GCGC	3 cut(s)	15, 82, 1293
Hin1II	CATG	8 cut(s)	78, 348, 409, 725, 1415, 1502, 1568, 1879
Hin6I	GCGC	3 cut(s)	13, 80, 1291
HinP1I	GCGC	3 cut(s)	13, 80, 1291
HincII	GTYRAC	1 cut(s)	1165
HindII	GTYRAC	1 cut(s)	1165
HindIII	AAGCTT	1 cut(s)	873
HpaI	GTTAAC	1 cut(s)	1165
HpaII	CCGG	5 cut(s)	102, 215, 318, 1639, 1813
HphI	GGTGA	7 cut(s)	49, 64, 106, 513, 1775, 1836, 2015
Hpy166II	GTNNAC	5 cut(s)	1165, 1307, 1528, 1714, 2117
Hpy188III	TCNNGA	6 cut(s)	160, 584, 947, 1499, 1949, 1955
Hpy8I	GTNNAC	5 cut(s)	1165, 1307, 1528, 1714, 2117
Hpy99I	CGWCG	1 cut(s)	1950
HpyAV	CCTTC	9 cut(s)	34, 43, 545, 617, 686, 1172, 1343, 1565, 1991
HpyCH4III	ACNGT	7 cut(s)	289, 328, 649, 845, 939, 1116, 2041
HpyCH4IV	ACGT	1 cut(s)	90
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 186, 338, 1074, 1148, 1299, 1928
HpyF3I	CTNAG	7 cut(s)	249, 447, 481, 1156, 1538, 1632, 2072
HpySE526I	ACGT	1 cut(s)	90
Hsp92II	CATG	8 cut(s)	78, 348, 409, 725, 1415, 1502, 1568, 1879
HspAI	GCGC	3 cut(s)	13, 80, 1291
Ksp22I	TGATCA	1 cut(s)	943
KspAI	GTTAAC	1 cut(s)	1165
Kzo9I	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1867, 1951, 2005
LguI	GCTCTTC	1 cut(s)	543
LmnI	GCTCC	6 cut(s)	10, 20, 353, 605, 1397, 1738
Lsp1109I	GCAGC	3 cut(s)	344, 1915, 2098
LweI	GCATC	3 cut(s)	410, 1012, 1258
MaeI	CTAG	3 cut(s)	803, 1602, 1994
MaeII	ACGT	1 cut(s)	90
MaeIII	GTNAC	5 cut(s)	112, 149, 638, 649, 1362
MalI	GATC	9 cut(s)	219, 233, 735, 830, 901, 945, 1869, 1953, 2007
MboI	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1867, 1951, 2005
MfeI	CAATTG	1 cut(s)	756
MflI	RGATCY	6 cut(s)	231, 733, 828, 899, 1867, 1951
MhlI	GDGCHC	3 cut(s)	482, 1309, 1530
MlsI	TGGCCA	1 cut(s)	2058
MluCI	AATT	8 cut(s)	500, 756, 1006, 1130, 1692, 1766, 1848, 1958
MluNI	TGGCCA	1 cut(s)	2058
MlyI	GAGTC	4 cut(s)	202, 248, 746, 1457
MmeI	TCCRAC	3 cut(s)	84, 1716, 1733
Mox20I	TGGCCA	1 cut(s)	2058
MscI	TGGCCA	1 cut(s)	2058
MseI	TTAA	6 cut(s)	141, 297, 308, 1164, 1487, 1982
MslI	CAYNNNNRTG	5 cut(s)	73, 572, 846, 1317, 1410
Msp20I	TGGCCA	1 cut(s)	2058
MspA1I	CMGCKG	1 cut(s)	180
MspI	CCGG	5 cut(s)	102, 215, 318, 1639, 1813
MspR9I	CCNGG	7 cut(s)	102, 281, 318, 525, 976, 1439, 2067
MunI	CAATTG	1 cut(s)	756
Mva1269I	GAATGC	1 cut(s)	1151
MvaI	CCWGG	5 cut(s)	281, 525, 976, 1439, 2067
MvnI	CGCG	1 cut(s)	1293
MwoI	GCNNNNNNNGC	7 cut(s)	41, 186, 338, 1074, 1148, 1299, 1928
NciI	CCSGG	2 cut(s)	102, 318
NdeI	CATATG	1 cut(s)	739
NdeII	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1867, 1951, 2005
NlaIII	CATG	8 cut(s)	78, 348, 409, 725, 1415, 1502, 1568, 1879
NlaIV	GGNNCC	3 cut(s)	355, 830, 1869
NmuCI	GTSAC	2 cut(s)	112, 649
NspI	RCATGY	1 cut(s)	348
NspV	TTCGAA	1 cut(s)	538
OliI	CACNNNNGTG	2 cut(s)	572, 846
PagI	TCATGA	1 cut(s)	1498
PasI	CCCWGGG	1 cut(s)	975
PciSI	GCTCTTC	1 cut(s)	543
PctI	GAATGC	1 cut(s)	1151
PfeI	GAWTC	6 cut(s)	156, 174, 469, 679, 1758, 1886
PflFI	GACNNNGTC	1 cut(s)	110
PflMI	CCANNNNNTGG	1 cut(s)	1097
PinAI	ACCGGT	2 cut(s)	1638, 1812
PkrI	GCNGC	3 cut(s)	334, 1930, 2088
PleI	GAGTC	4 cut(s)	201, 247, 746, 1456
PpsI	GAGTC	4 cut(s)	201, 247, 746, 1456
Ppu21I	YACGTR	1 cut(s)	91
PsiI	TTATAA	2 cut(s)	773, 879
Psp6I	CCWGG	5 cut(s)	279, 523, 974, 1437, 2065
PspGI	CCWGG	5 cut(s)	279, 523, 974, 1437, 2065
PspN4I	GGNNCC	3 cut(s)	355, 830, 1869
PspPI	GGNCC	1 cut(s)	1636
PstNI	CAGNNNCTG	2 cut(s)	159, 1271
PsuI	RGATCY	6 cut(s)	231, 733, 828, 899, 1867, 1951
PsyI	GACNNNGTC	1 cut(s)	110
RsaI	GTAC	7 cut(s)	313, 325, 369, 1039, 1379, 1715, 1992
RsaNI	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1714, 1991
RseI	CAYNNNNRTG	5 cut(s)	73, 572, 846, 1317, 1410
SapI	GCTCTTC	1 cut(s)	543
SaqAI	TTAA	6 cut(s)	141, 297, 308, 1164, 1487, 1982
SatI	GCNGC	3 cut(s)	333, 1929, 2087
Sau3AI	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1867, 1951, 2005
Sau96I	GGNCC	1 cut(s)	1636
ScaI	AGTACT	2 cut(s)	313, 1992
SchI	GAGTC	4 cut(s)	202, 248, 746, 1457
ScrFI	CCNGG	7 cut(s)	102, 281, 318, 525, 976, 1439, 2067
SduI	GDGCHC	3 cut(s)	482, 1309, 1530
SfaNI	GCATC	3 cut(s)	410, 1012, 1258
SfcI	CTRYAG	2 cut(s)	1279, 1910
SfuI	TTCGAA	1 cut(s)	538
SinI	GGWCC	1 cut(s)	1636
SmiMI	CAYNNNNRTG	5 cut(s)	73, 572, 846, 1317, 1410
SmlI	CTYRAG	1 cut(s)	1260
SmoI	CTYRAG	1 cut(s)	1260
Sse9I	AATT	8 cut(s)	500, 756, 1006, 1130, 1692, 1766, 1848, 1958
SsiI	CCGC	6 cut(s)	35, 44, 66, 180, 189, 1586
SspMI	CTAG	3 cut(s)	803, 1602, 1994
StyD4I	CCNGG	7 cut(s)	100, 279, 316, 523, 974, 1437, 2065
StyI	CCWWGG	2 cut(s)	1032, 1395
TaaI	ACNGT	7 cut(s)	289, 328, 649, 845, 939, 1116, 2041
TaiI	ACGT	1 cut(s)	93
TaqI	TCGA	2 cut(s)	538, 1948
TaqII	GACCGA	1 cut(s)	1558
TasI	AATT	8 cut(s)	500, 756, 1006, 1130, 1692, 1766, 1848, 1958
TatI	WGTACW	3 cut(s)	311, 1377, 1990
TfiI	GAWTC	6 cut(s)	156, 174, 469, 679, 1758, 1886
Tru1I	TTAA	6 cut(s)	141, 297, 308, 1164, 1487, 1982
Tru9I	TTAA	6 cut(s)	141, 297, 308, 1164, 1487, 1982
TscAI	CASTG	5 cut(s)	294, 579, 652, 850, 1636
TseFI	GTSAC	2 cut(s)	112, 649
TseI	GCWGC	3 cut(s)	332, 1928, 2086
Tsp45I	GTSAC	2 cut(s)	112, 649
TspDTI	ATGAA	9 cut(s)	257, 452, 501, 575, 618, 756, 1187, 1487, 1515
TspGWI	ACGGA	1 cut(s)	1160
TspRI	CASTG	5 cut(s)	294, 579, 652, 850, 1636
Tth111I	GACNNNGTC	1 cut(s)	110
Van91I	CCANNNNNTGG	1 cut(s)	1097
VneI	GTGCAC	2 cut(s)	1305, 1526
VpaK11BI	GGWCC	1 cut(s)	1636
XapI	RAATTY	1 cut(s)	1958
XceI	RCATGY	1 cut(s)	348
XcmI	CCANNNNNNNNNTGG	2 cut(s)	67, 842
XspI	CTAG	3 cut(s)	803, 1602, 1994
ZrmI	AGTACT	2 cut(s)	313, 1992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.