Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001685.1

Orthogroup ID

OG0007297

Physical Location & Seq

Genomic Coordinates Forward (+)

86441 .. 95575

Gene Structure 9135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001685.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

atggcggggaagaccgactcggtgtcgattcgggtgccgtaccggaacctgaaggatacggaagttgagatgatggggatggatgatgagcctcatcatcggatcgacctcaattcctctaggccgtcgccgtcttcgtcgtcgtccgctagggttcagaacgggaacggcgatcttccgccgccgcagagtctaccggttcccaatcagaacactctgatgactctaattctcagctgtacggttgccgccggtgttcagttcggttgggctttgcagctttcgctcttaactccctatatacagacacttggaatagggcatgcattttcttcatttatttggctttgtggccctattacaggccttgtggttcaaccatgtgttggtatttggagtgacaaatgctctttaaaaatgggaagaaggcgtcccttcatacttgcaggatctctcttgatctctattgccgtggtattaatcggattttctgcagacattggatacttattaggagatacacatgagcattgcagaaccttcaaaggtacccgaacaagggctgcttttgtctttattattggattttggttgctggatcttgccaataatacagtccagggaccagcccgtgctcttctagcagatctatcaggccctgatcaacgtaacacagcaaatgctgtgttttgctcatggatggctgttggtaacatcttaggattttctgctggagcaagtggaaattggcacaggtggtttcctttcttgttgagtagagcttgctgtgaagcctgtggaaatcttaaagcagcatttcttatagcagtggtatttctcttgttttgtacacttgttactatatattttgctgaggaggttccactcactgcatatcagcccatgcgtatatcagattctgctcctttattggacgatccgcaacgaaatggtttcgaacattcaaaattaaagtctgatatgcatgttatagatactgccaatcagaacagagctgcgaatggctatgaaagagatagaaatgtaaaacatcccgtcccaaatgttgaggaagttcagaatggtggttttaatgatggtcctggagcagtgttggtcaatctattgaccagtttaaggcatttaccacctgcaatgcattcagtgctcattgttatggctcttacttggttatcctggtttccgttctttctttttgatacggattggatgggaagggaagtttatcatggagatccttcagggaacttgtctgaagtgcacacttatgatcagggtgtcagagaaggtgcattcggtttattattgaattcagtcgttcttggaattagttctttcctaattgagccaatgtgtaagcggatgggggcaaggctagtgtgggcaatgagcaattttattgtgtttgcctgcatggcaggcactgctattataagttggatatctttaggagagtattctaaagggattgaacacgtaattggagggaatgataatatcaaaattgcttccctgattgtttttgctcttcttgggtttcctctcgctatcacatacagtgttcccttttctgttacagctgagttgactgctgatgcaggcggtggacaaggactggctataggagttttgaatctggcaattgtcatcccacagatgattgtgtctctcggtgcggggccatgggatgctttatttggtggaggaaatatacctgcatttgttttggcttcttttgctgcccttggtgataaccacaccatgcgtgactcttatcaacaatacaggagcattggctccctgaggaatggctctgacattttgcgtcacaagtcttgcgtcgcaatccagcttacccagatgtttccccttgatagcaatacgccaatattagattatgctcatggtgacataggccatttgggaaatgaggtgggtgtggcagaagagagagaggagcagtgggatagagagagagagggagagatggccaacggggatggtagtaacttgtgcattgtatattgggtggtacacaaggacaaaagaagaccagctctagtagggttgatgacaacagcccttgctcgggcttttcaaaacccctttggcttcttttctctctctatttctggttcacgcattttatcgaacaccttcgatgcatacttagctgcacaggcttcagcttcagagctcaggaggtcaagctcgagccttgaagaaaatgataaatggtatggatatgatgggaaagagcttcgtcctaatccacgatacctgttggtgggttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006950 GO:0008150 GO:0008515 GO:0008643 GO:0009611 GO:0012505 GO:0015144 GO:0015154 GO:0015157 GO:0015766 GO:0015770 GO:0015772 GO:0022857 GO:0034219 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0090406 GO:0120025

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1 MFS_2

Protein Analysis

771

Amino Acids

84.05

Weight (kDa)

5.96

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007297)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02860 AT2G02860
fragaria_vesca	FvH4_4g31620 FvH4_4g31620 FvH4_4g31620 FvH4_4g31620 FvH4_4g31620
malus_domestica	MD13G1074600.v1.1 MD16G1075900.v1.1
prunus_persica	Prupe.1G271500_v2.0.a1 Prupe.1G271500_v2.0.a1
pyrus_communis	pycom13g06650
rosa_chinensis	RchiOBHm_Chr4g0440131
rosa_laevigata	RLG00000006203
rosa_multiflora	Rmu_sc0001685.1_g000018
rosa_roxburghii	Rroxscaffold_5G00381060
rosa_rugosa	Rorug04G0324400 Rorug04G0324400 Rorug04G0324500 Rorug04G0324500 Rorug04G0324500 Rorug04G0324500
rosa_samantha	Rh4AG375400 Rh4DG381900
rosa_wichuraiana	Rw4G032120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1454
AarI	CACCTGC	1 cut(s)	1159
Acc36I	ACCTGC	2 cut(s)	1159, 1744
Acc65I	GGTACC	1 cut(s)	548
AccB1I	GGYRCC	2 cut(s)	34, 548
AccB7I	CCANNNNNTGG	1 cut(s)	386
AccI	GTMKAC	1 cut(s)	193
AclWI	GGATC	5 cut(s)	110, 457, 606, 932, 1250
AcoI	YGGCCR	1 cut(s)	2010
AcsI	RAATTY	1 cut(s)	1330
AcuI	CTGAAG	5 cut(s)	71, 1245, 1296, 2190, 2196
AcyI	GRCGYC	1 cut(s)	430
AfaI	GTAC	5 cut(s)	41, 241, 550, 850, 2055
AfiI	CCNNNNNNNGG	8 cut(s)	362, 386, 558, 559, 1137, 2109, 2110, 2308
AflIII	ACRYGT	1 cut(s)	1495
AgeI	ACCGGT	1 cut(s)	196
AgsI	TTSAA	8 cut(s)	377, 544, 966, 1330, 1493, 1654, 2120, 2243
AhdI	GACNNNNNGTC	1 cut(s)	22
AjnI	CCWGG	3 cut(s)	618, 1102, 1196
AjuI	GAANNNNNNNTTGG	2 cut(s)	1485, 1517
Alw21I	GWGCWC	4 cut(s)	637, 1170, 1284, 2220
Alw26I	GTCTC	1 cut(s)	1692
Alw44I	GTGCAC	1 cut(s)	1280
AlwI	GGATC	5 cut(s)	110, 457, 606, 932, 1250
AlwNI	CAGNNNCTG	3 cut(s)	659, 920, 1445
Ama87I	CYCGRG	2 cut(s)	2109, 2233
AoxI	GGCC	7 cut(s)	122, 352, 364, 655, 1700, 1936, 2010
ApaLI	GTGCAC	1 cut(s)	1280
ApeKI	GCWGC	6 cut(s)	277, 563, 812, 1016, 1760, 2195
ApoI	RAATTY	1 cut(s)	1330
ArsI	GACNNNNNNTTYG	2 cut(s)	959, 991
AseI	ATTAAT	1 cut(s)	479
AsiGI	ACCGGT	1 cut(s)	196
Asp700I	GAANNNNTTC	2 cut(s)	1351, 2177
Asp718I	GGTACC	1 cut(s)	548
AspS9I	GGNCC	5 cut(s)	353, 623, 656, 1100, 1700
AsuHPI	GGTGA	2 cut(s)	1781, 1940
AsuII	TTCGAA	1 cut(s)	957
AvaI	CYCGRG	2 cut(s)	2109, 2233
AvaII	GGWCC	2 cut(s)	623, 1100
AxyI	CCTNAGG	1 cut(s)	1823
BaeGI	GKGCMC	1 cut(s)	1284
BaeI	ACNNNNGTAYC	2 cut(s)	48, 81
BalI	TGGCCA	1 cut(s)	2012
BanI	GGYRCC	2 cut(s)	34, 548
BanII	GRGCYC	1 cut(s)	2220
BbsI	GAAGAC	3 cut(s)	17, 126, 2077
Bbv12I	GWGCWC	4 cut(s)	637, 1170, 1284, 2220
BbvCI	CCTCAGC	1 cut(s)	873
BbvI	GCAGC	6 cut(s)	289, 550, 824, 1003, 1747, 2182
BccI	CCATC	9 cut(s)	67, 73, 694, 1091, 1225, 1378, 2002, 2015, 2264
BceAI	ACGGC	5 cut(s)	22, 109, 115, 184, 455
BcgI	CGANNNNNNTGC	2 cut(s)	16, 50
BciT130I	CCWGG	3 cut(s)	620, 1104, 1198
BciVI	GTATCC	2 cut(s)	49, 497
BclI	TGATCA	2 cut(s)	661, 1291
BcoDI	GTCTC	1 cut(s)	1692
BfaI	CTAG	5 cut(s)	120, 150, 641, 1397, 2081
BfmI	CTRYAG	2 cut(s)	492, 1641
BfuAI	ACCTGC	2 cut(s)	1159, 1744
BfuI	GTATCC	2 cut(s)	49, 497
BglI	GCCNNNNNGGC	1 cut(s)	1436
BglII	AGATCT	1 cut(s)	646
BisI	GCNGC	9 cut(s)	182, 185, 249, 278, 564, 813, 1017, 1761, 2196
BlsI	GCNGC	9 cut(s)	183, 186, 250, 279, 565, 814, 1018, 1762, 2197
Bme1390I	CCNGG	3 cut(s)	620, 1104, 1198
Bme18I	GGWCC	2 cut(s)	623, 1100
BmeRI	GACNNNNNGTC	1 cut(s)	22
BmeT110I	CYCGRG	2 cut(s)	2109, 2233
BmgT120I	GGNCC	5 cut(s)	353, 623, 656, 1100, 1700
BmiI	GGNNCC	8 cut(s)	36, 47, 201, 550, 624, 882, 1701, 1819
BmrFI	CCNGG	3 cut(s)	620, 1104, 1198
BmsI	GCATC	3 cut(s)	1606, 1699, 2173
BpiI	GAAGAC	3 cut(s)	17, 126, 2077
BpmI	CTGGAG	2 cut(s)	753, 1125
Bpu10I	CCTNAGC	2 cut(s)	873, 2219
Bpu14I	TTCGAA	1 cut(s)	957
BsaAI	YACGTR	1 cut(s)	1498
BsaHI	GRCGYC	1 cut(s)	430
BsaJI	CCNNGG	4 cut(s)	471, 619, 1703, 1765
BsaWI	WCCGGW	2 cut(s)	42, 196
Bsc4I	CCNNNNNNNGG	8 cut(s)	362, 386, 558, 559, 1137, 2109, 2110, 2308
Bse118I	RCCGGY	2 cut(s)	196, 251
Bse1I	ACTGG	2 cut(s)	1131, 1641
Bse21I	CCTNAGG	1 cut(s)	1823
Bse3DI	GCAATG	3 cut(s)	529, 1161, 1413
BseBI	CCWGG	3 cut(s)	620, 1104, 1198
BseDI	CCNNGG	4 cut(s)	471, 619, 1703, 1765
BseGI	GGATG	9 cut(s)	84, 88, 705, 1051, 1236, 1389, 1668, 1714, 2026
BseLI	CCNNNNNNNGG	8 cut(s)	362, 386, 558, 559, 1137, 2109, 2110, 2308
BseMI	GCAATG	3 cut(s)	529, 1161, 1413
BseMII	CTCAG	5 cut(s)	247, 864, 1593, 1814, 2233
BseNI	ACTGG	2 cut(s)	1131, 1641
BseRI	GAGGAG	2 cut(s)	890, 1991
BseSI	GKGCMC	1 cut(s)	1284
BseXI	GCAGC	6 cut(s)	289, 550, 824, 1003, 1747, 2182
BsgI	GTGCAG	1 cut(s)	2181
BshFI	GGCC	7 cut(s)	124, 354, 366, 657, 1702, 1938, 2012
BshNI	GGYRCC	2 cut(s)	34, 548
BshTI	ACCGGT	1 cut(s)	196
BsiHKAI	GWGCWC	4 cut(s)	637, 1170, 1284, 2220
BsiHKCI	CYCGRG	2 cut(s)	2109, 2233
BsiSI	CCGG	3 cut(s)	43, 197, 252
BslFI	GGGAC	3 cut(s)	417, 636, 1043
BslI	CCNNNNNNNGG	8 cut(s)	362, 386, 558, 559, 1137, 2109, 2110, 2308
BsmAI	GTCTC	1 cut(s)	1692
BsmFI	GGGAC	3 cut(s)	417, 636, 1043
BsmI	GAATGC	2 cut(s)	1159, 1313
BsnI	GGCC	7 cut(s)	124, 354, 366, 657, 1702, 1938, 2012
BsoBI	CYCGRG	2 cut(s)	2109, 2233
Bsp119I	TTCGAA	1 cut(s)	957
Bsp1286I	GDGCHC	4 cut(s)	637, 1170, 1284, 2220
Bsp1407I	TGTACA	1 cut(s)	848
Bsp19I	CCATGG	1 cut(s)	1703
BspANI	GGCC	7 cut(s)	124, 354, 366, 657, 1702, 1938, 2012
BspCNI	CTCAG	5 cut(s)	246, 865, 1594, 1815, 2232
BspLI	GGNNCC	8 cut(s)	36, 47, 201, 550, 624, 882, 1701, 1819
BspMAI	CTGCAG	1 cut(s)	496
BspMI	ACCTGC	2 cut(s)	1159, 1744
BspPI	GGATC	5 cut(s)	110, 457, 606, 932, 1250
BspQI	GCTCTTC	2 cut(s)	642, 1554
BspT104I	TTCGAA	1 cut(s)	957
BspT107I	GGYRCC	2 cut(s)	34, 548
BsrDI	GCAATG	3 cut(s)	529, 1161, 1413
BsrFI	RCCGGY	2 cut(s)	196, 251
BsrGI	TGTACA	1 cut(s)	848
BsrI	ACTGG	2 cut(s)	1131, 1641
BssAI	RCCGGY	2 cut(s)	196, 251
BssECI	CCNNGG	4 cut(s)	471, 619, 1703, 1765
BssNI	GRCGYC	1 cut(s)	430
BssT1I	CCWWGG	2 cut(s)	1703, 1765
Bst2UI	CCWGG	3 cut(s)	620, 1104, 1198
Bst4CI	ACNGT	3 cut(s)	244, 616, 1580
Bst6I	CTCTTC	3 cut(s)	642, 1554, 1962
BstACI	GRCGYC	1 cut(s)	430
BstAPI	GCANNNNNTGC	2 cut(s)	1165, 1445
BstAUI	TGTACA	1 cut(s)	848
BstBAI	YACGTR	1 cut(s)	1498
BstBI	TTCGAA	1 cut(s)	957
BstC8I	GCNNGC	5 cut(s)	324, 784, 1432, 1441, 1621
BstDEI	CTNAG	7 cut(s)	233, 718, 873, 1602, 1823, 2191, 2219
BstDSI	CCRYGG	2 cut(s)	471, 1703
BstENI	CCTNNNNNAGG	1 cut(s)	360
BstF5I	GGATG	9 cut(s)	84, 88, 705, 1051, 1236, 1389, 1668, 1714, 2026
BstMAI	GTCTC	1 cut(s)	1692
BstMWI	GCNNNNNNNGC	9 cut(s)	283, 641, 1165, 1436, 1440, 1445, 1757, 2192, 2201
BstNI	CCWGG	3 cut(s)	620, 1104, 1198
BstNSI	RCATGY	2 cut(s)	326, 989
BstSCI	CCNGG	3 cut(s)	618, 1102, 1196
BstSFI	CTRYAG	2 cut(s)	492, 1641
BstSLI	GKGCMC	1 cut(s)	1284
BstV1I	GCAGC	6 cut(s)	289, 550, 824, 1003, 1747, 2182
BstV2I	GAAGAC	3 cut(s)	17, 126, 2077
BstX2I	RGATCY	4 cut(s)	449, 598, 646, 1255
BstYI	RGATCY	4 cut(s)	449, 598, 646, 1255
Bsu36I	CCTNAGG	1 cut(s)	1823
BsuI	GTATCC	2 cut(s)	49, 497
BsuRI	GGCC	7 cut(s)	124, 354, 366, 657, 1702, 1938, 2012
BtgI	CCRYGG	2 cut(s)	471, 1703
BtsCI	GGATG	9 cut(s)	84, 88, 705, 1051, 1236, 1389, 1668, 1714, 2026
BtsI	GCAGTG	5 cut(s)	834, 888, 1116, 1443, 1988
BtsIMutI	CAGTG	7 cut(s)	834, 888, 1116, 1170, 1443, 1585, 1988
BveI	ACCTGC	2 cut(s)	1159, 1744
Cac8I	GCNNGC	5 cut(s)	324, 784, 1432, 1441, 1621
CaiI	CAGNNNCTG	3 cut(s)	659, 920, 1445
Cfr10I	RCCGGY	2 cut(s)	196, 251
Cfr13I	GGNCC	5 cut(s)	353, 623, 656, 1100, 1700
CseI	GACGC	3 cut(s)	419, 1835, 1849
Csp6I	GTAC	5 cut(s)	40, 240, 549, 849, 2054
CspAI	ACCGGT	1 cut(s)	196
CviQI	GTAC	5 cut(s)	40, 240, 549, 849, 2054
DdeI	CTNAG	7 cut(s)	233, 718, 873, 1602, 1823, 2191, 2219
DraI	TTTAAA	1 cut(s)	414
DriI	GACNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	1 cut(s)	2010
Eam1104I	CTCTTC	3 cut(s)	642, 1554, 1962
Eam1105I	GACNNNNNGTC	1 cut(s)	22
EarI	CTCTTC	3 cut(s)	642, 1554, 1962
EciI	GGCGGA	1 cut(s)	168
Ecl136II	GAGCTC	1 cut(s)	2218
Eco130I	CCWWGG	2 cut(s)	1703, 1765
Eco147I	AGGCCT	1 cut(s)	366
Eco24I	GRGCYC	1 cut(s)	2220
Eco32I	GATATC	1 cut(s)	1464
Eco47I	GGWCC	2 cut(s)	623, 1100
Eco53kI	GAGCTC	1 cut(s)	2218
Eco57I	CTGAAG	5 cut(s)	71, 1245, 1296, 2190, 2196
Eco81I	CCTNAGG	1 cut(s)	1823
Eco88I	CYCGRG	2 cut(s)	2109, 2233
EcoICRI	GAGCTC	1 cut(s)	2218
EcoNI	CCTNNNNNAGG	1 cut(s)	360
EcoO109I	RGGNCCY	1 cut(s)	656
EcoRI	GAATTC	1 cut(s)	1330
EcoRII	CCWGG	3 cut(s)	618, 1102, 1196
EcoRV	GATATC	1 cut(s)	1464
EcoT14I	CCWWGG	2 cut(s)	1703, 1765
EcoT22I	ATGCAT	4 cut(s)	328, 987, 1161, 2188
EcoT38I	GRGCYC	1 cut(s)	2220
ErhI	CCWWGG	2 cut(s)	1703, 1765
FalI	AAGNNNNNCTT	2 cut(s)	550, 582
FaqI	GGGAC	3 cut(s)	417, 636, 1043
FauI	CCCGC	1 cut(s)	1690
FbaI	TGATCA	2 cut(s)	661, 1291
FblI	GTMKAC	1 cut(s)	193
Fnu4HI	GCNGC	9 cut(s)	182, 185, 249, 278, 564, 813, 1017, 1761, 2196
FokI	GGATG	9 cut(s)	91, 95, 712, 1038, 1243, 1396, 1655, 1721, 2033
FriOI	GRGCYC	1 cut(s)	2220
Fsp4HI	GCNGC	9 cut(s)	182, 185, 249, 278, 564, 813, 1017, 1761, 2196
FspBI	CTAG	5 cut(s)	120, 150, 641, 1397, 2081
GluI	GCNGC	9 cut(s)	182, 185, 249, 278, 564, 813, 1017, 1761, 2196
GsuI	CTGGAG	2 cut(s)	753, 1125
HaeIII	GGCC	7 cut(s)	124, 354, 366, 657, 1702, 1938, 2012
HapII	CCGG	3 cut(s)	43, 197, 252
HgaI	GACGC	3 cut(s)	419, 1835, 1849
Hin1I	GRCGYC	1 cut(s)	430
HincII	GTYRAC	1 cut(s)	1608
HindII	GTYRAC	1 cut(s)	1608
HinfI	GANTC	7 cut(s)	17, 28, 190, 223, 917, 1654, 1790
HpaII	CCGG	3 cut(s)	43, 197, 252
HphI	GGTGA	2 cut(s)	1781, 1940
Hpy166II	GTNNAC	7 cut(s)	194, 851, 1282, 1608, 1628, 2056, 2159
Hpy188III	TCNNGA	2 cut(s)	457, 2221
Hpy8I	GTNNAC	7 cut(s)	194, 851, 1282, 1608, 1628, 2056, 2159
Hpy99I	CGWCG	4 cut(s)	130, 142, 145, 1865
HpyAV	CCTTC	8 cut(s)	46, 420, 445, 550, 1230, 1269, 1301, 2188
HpyCH4III	ACNGT	3 cut(s)	244, 616, 1580
HpyCH4IV	ACGT	2 cut(s)	667, 1497
HpyF10VI	GCNNNNNNNGC	9 cut(s)	283, 641, 1165, 1436, 1440, 1445, 1757, 2192, 2201
HpyF3I	CTNAG	7 cut(s)	233, 718, 873, 1602, 1823, 2191, 2219
HpySE526I	ACGT	2 cut(s)	667, 1497
Hsp92I	GRCGYC	1 cut(s)	430
KpnI	GGTACC	1 cut(s)	552
Ksp22I	TGATCA	2 cut(s)	661, 1291
LguI	GCTCTTC	2 cut(s)	642, 1554
LmnI	GCTCC	6 cut(s)	734, 928, 1106, 1809, 1823, 1978
Lsp1109I	GCAGC	6 cut(s)	289, 550, 824, 1003, 1747, 2182
LweI	GCATC	3 cut(s)	1606, 1699, 2173
MaeI	CTAG	5 cut(s)	120, 150, 641, 1397, 2081
MaeII	ACGT	2 cut(s)	667, 1497
MaeIII	GTNAC	9 cut(s)	398, 668, 710, 856, 1594, 1787, 1847, 1928, 2027
MfeI	CAATTG	1 cut(s)	1662
MflI	RGATCY	4 cut(s)	449, 598, 646, 1255
MhlI	GDGCHC	4 cut(s)	637, 1170, 1284, 2220
MlsI	TGGCCA	1 cut(s)	2012
MluNI	TGGCCA	1 cut(s)	2012
MlyI	GAGTC	4 cut(s)	11, 199, 217, 1784
MmeI	TCCRAC	1 cut(s)	1439
Mox20I	TGGCCA	1 cut(s)	2012
Mph1103I	ATGCAT	4 cut(s)	328, 987, 1161, 2188
MroXI	GAANNNNTTC	2 cut(s)	1351, 2177
MscI	TGGCCA	1 cut(s)	2012
MseI	TTAA	7 cut(s)	290, 413, 479, 807, 971, 1092, 1136
MslI	CAYNNNNRTG	3 cut(s)	218, 1175, 1287
Msp20I	TGGCCA	1 cut(s)	2012
MspA1I	CMGCKG	2 cut(s)	237, 1601
MspI	CCGG	3 cut(s)	43, 197, 252
MspR9I	CCNGG	3 cut(s)	620, 1104, 1198
MunI	CAATTG	1 cut(s)	1662
Mva1269I	GAATGC	2 cut(s)	1159, 1313
MvaI	CCWGG	3 cut(s)	620, 1104, 1198
MwoI	GCNNNNNNNGC	9 cut(s)	283, 641, 1165, 1436, 1440, 1445, 1757, 2192, 2201
NcoI	CCATGG	1 cut(s)	1703
NlaIV	GGNNCC	8 cut(s)	36, 47, 201, 550, 624, 882, 1701, 1819
NmuCI	GTSAC	4 cut(s)	398, 1787, 1847, 1928
NsiI	ATGCAT	4 cut(s)	328, 987, 1161, 2188
NspI	RCATGY	2 cut(s)	326, 989
NspV	TTCGAA	1 cut(s)	957
PaeI	GCATGC	1 cut(s)	326
PaeR7I	CTCGAG	1 cut(s)	2233
PaqCI	CACCTGC	1 cut(s)	1159
PceI	AGGCCT	1 cut(s)	366
PciSI	GCTCTTC	2 cut(s)	642, 1554
PcsI	WCGNNNNNNNCGW	2 cut(s)	134, 168
PctI	GAATGC	2 cut(s)	1159, 1313
PdmI	GAANNNNTTC	2 cut(s)	1351, 2177
PfeI	GAWTC	3 cut(s)	28, 917, 1654
PflMI	CCANNNNNTGG	1 cut(s)	386
PfoI	TCCNGGA	1 cut(s)	1102
PinAI	ACCGGT	1 cut(s)	196
PkrI	GCNGC	9 cut(s)	183, 186, 250, 279, 565, 814, 1018, 1762, 2197
PleI	GAGTC	4 cut(s)	11, 198, 217, 1784
PpsI	GAGTC	4 cut(s)	11, 198, 217, 1784
Ppu21I	YACGTR	1 cut(s)	1498
PshBI	ATTAAT	1 cut(s)	479
PsiI	TTATAA	1 cut(s)	1454
Psp124BI	GAGCTC	1 cut(s)	2220
Psp6I	CCWGG	3 cut(s)	618, 1102, 1196
PspGI	CCWGG	3 cut(s)	618, 1102, 1196
PspN4I	GGNNCC	8 cut(s)	36, 47, 201, 550, 624, 882, 1701, 1819
PspPI	GGNCC	5 cut(s)	353, 623, 656, 1100, 1700
PspXI	VCTCGAGB	1 cut(s)	2233
PstI	CTGCAG	1 cut(s)	496
PstNI	CAGNNNCTG	3 cut(s)	659, 920, 1445
PsuI	RGATCY	4 cut(s)	449, 598, 646, 1255
PvuII	CAGCTG	2 cut(s)	237, 1601
RsaI	GTAC	5 cut(s)	41, 241, 550, 850, 2055
RsaNI	GTAC	5 cut(s)	40, 240, 549, 849, 2054
RseI	CAYNNNNRTG	3 cut(s)	218, 1175, 1287
SacI	GAGCTC	1 cut(s)	2220
SapI	GCTCTTC	2 cut(s)	642, 1554
SaqAI	TTAA	7 cut(s)	290, 413, 479, 807, 971, 1092, 1136
SatI	GCNGC	9 cut(s)	182, 185, 249, 278, 564, 813, 1017, 1761, 2196
Sau96I	GGNCC	5 cut(s)	353, 623, 656, 1100, 1700
SchI	GAGTC	4 cut(s)	11, 199, 217, 1784
ScrFI	CCNGG	3 cut(s)	620, 1104, 1198
SduI	GDGCHC	4 cut(s)	637, 1170, 1284, 2220
SfaNI	GCATC	3 cut(s)	1606, 1699, 2173
SfcI	CTRYAG	2 cut(s)	492, 1641
Sfr274I	CTCGAG	1 cut(s)	2233
SfuI	TTCGAA	1 cut(s)	957
SgrAI	CRCCGGYG	1 cut(s)	251
SinI	GGWCC	2 cut(s)	623, 1100
SlaI	CTCGAG	1 cut(s)	2233
SmiMI	CAYNNNNRTG	3 cut(s)	218, 1175, 1287
SmlI	CTYRAG	1 cut(s)	2233
SmoI	CTYRAG	1 cut(s)	2233
SphI	GCATGC	1 cut(s)	326
SseBI	AGGCCT	1 cut(s)	366
SspI	AATATT	1 cut(s)	1911
SspMI	CTAG	5 cut(s)	120, 150, 641, 1397, 2081
SstI	GAGCTC	1 cut(s)	2220
StuI	AGGCCT	1 cut(s)	366
StyD4I	CCNGG	3 cut(s)	618, 1102, 1196
StyI	CCWWGG	2 cut(s)	1703, 1765
TaaI	ACNGT	3 cut(s)	244, 616, 1580
TaiI	ACGT	2 cut(s)	670, 1500
TaqI	TCGA	6 cut(s)	26, 105, 957, 2171, 2181, 2234
TaqII	GACCGA	1 cut(s)	29
TatI	WGTACW	1 cut(s)	848
TauI	GCSGC	3 cut(s)	184, 187, 251
TfiI	GAWTC	3 cut(s)	28, 917, 1654
Tru1I	TTAA	7 cut(s)	290, 413, 479, 807, 971, 1092, 1136
Tru9I	TTAA	7 cut(s)	290, 413, 479, 807, 971, 1092, 1136
TscAI	CASTG	7 cut(s)	834, 895, 1116, 1170, 1450, 1585, 1988
TseFI	GTSAC	4 cut(s)	398, 1787, 1847, 1928
TseI	GCWGC	6 cut(s)	277, 563, 812, 1016, 1760, 2195
Tsp45I	GTSAC	4 cut(s)	398, 1787, 1847, 1928
TspDTI	ATGAA	3 cut(s)	324, 427, 1044
TspGWI	ACGGA	3 cut(s)	74, 1194, 1238
TspRI	CASTG	7 cut(s)	834, 895, 1116, 1170, 1450, 1585, 1988
Van91I	CCANNNNNTGG	1 cut(s)	386
VneI	GTGCAC	1 cut(s)	1280
VpaK11BI	GGWCC	2 cut(s)	623, 1100
VspI	ATTAAT	1 cut(s)	479
XagI	CCTNNNNNAGG	1 cut(s)	360
XapI	RAATTY	1 cut(s)	1330
XceI	RCATGY	2 cut(s)	326, 989
XhoI	CTCGAG	1 cut(s)	2233
XmiI	GTMKAC	1 cut(s)	193
XmnI	GAANNNNTTC	2 cut(s)	1351, 2177
XspI	CTAG	5 cut(s)	120, 150, 641, 1397, 2081
Zsp2I	ATGCAT	4 cut(s)	328, 987, 1161, 2188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.