Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001744.1

Orthogroup ID

OG0015089

Physical Location & Seq

Genomic Coordinates Forward (+)

186390 .. 187867

Gene Structure 1478 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

atgccgtctccgtcgcaattggaagacgagctcttcccgtcgacgccgggaaagttcaagatcgagcgggcccacaccatgaaccgccagttccaccgctgcttcgcctccacaagcaccatgttcttgtgggccctcttcttgatcgcccttacggcgtcgtatttgagtttccagagcttcgtcgactccggcagccggtacttctcggcctcctggggaggaatccagtgggagaagcaggtccgcaactccgcgcagatccaccgttccggcggcatgtccgttctggttaccggggcggccggtttcgtcggcacccacgtgtccatggccctgaaaaagcgcggagacggcgtcgtggggcttgacaacttcaacagctactacgacccgtcgttgaagaaggcccgaaggaacctcctcaaaggccacggcatcttcatcgtcgagggagacataaacgacaacaaactgctcgacaagctcttcgacaccgtggccttcacccacgtcatgcatcttgccgcccaggccggagtccggtacgccatggagaaccccggctcttatgtccacagcaacatcgccggcctcgtcacgcttctcgagctccgtctacggcttaaacgacaaggtcccgttctcggaatccgaccggaccgaccagccggcgagcctctacgcggcgacgaagaaggccggcgaggaaatcacccacacttacaaccacatttacgggctgtcgatcatcctcagccgtcgattgtgtgggcctcgtccagctccgtctacggcttaaacgacaaggtcccgttctcggaatccgaccggaccgaccaaccggcgagcctctacgcggcgacgaagaaggccggcgaggaaatcacccacacttacaaccacatttacgggctgtcgatcaccgggttgagattcttcacggtttacggaccctggggccgacccgacatggcgtatttcagttttacccgcaacatccttcagggtaaacccatcacgatttaccgcgggaagaaccacgtggacttggccagggatttcacgtacattgacgacattgtcaagggttgtttggggtcattggatacctccgggaagagtaccgggtcgggcgggaagaagcggggacccgcaccgtaccggatctttaatttggggaacacgtcgccggtgacggtacccacacttgtgaacatcttggagcggcatttgaagatgaaggcgaagaggaatgtagtggagatgctcggaaacggcgacgttccgttcacgcacgcgaacataagcttggcccgaagacaaatcgggtataagccgacgaccgatttgcaaaccggattgaagaagtttgttagatggtacctttcttattacggttacaataacggcaaacctgtaaactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005996 GO:0006063 GO:0006082 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0012505 GO:0016051 GO:0016053 GO:0016853 GO:0016854 GO:0016857 GO:0019586 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032787 GO:0033481 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046364 GO:0046394 GO:0050378 GO:0050829 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0072330 GO:0097708 GO:0098542 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

475

Amino Acids

52.87

Weight (kDa)

9.8

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Epimerase	PF01370	96 - 371	7.1e-45	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	96 - 204	3.4e-06	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	97 - 207	5.5e-21	GDP-mannose 4,6 dehydratase
GDP_Man_Dehyd	PF16363	253 - 457	2.9e-18	GDP-mannose 4,6 dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30440
fragaria_vesca	FvH4_4g10050
malus_domestica	MD13G1274600.v1.1 MD16G1260200.v1.1
prunus_persica	Prupe.1G099000_v2.0.a1
pyrus_communis	pycom13g28710
rosa_chinensis	RchiOBHm_Chr4g0405111
rosa_laevigata	RLG00000008874
rosa_multiflora	Rmu_sc0001744.1_g000052 Rmu_ssc0000255.1_g000051
rosa_roxburghii	Rroxscaffold_5G00349280
rosa_rugosa	Rorug04G0053500
rosa_samantha	Rh4BG122100 Rh4CG135800 Rh4DG122300
rosa_wichuraiana	Rw4G010380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1082
Acc36I	ACCTGC	1 cut(s)	232
Acc65I	GGTACC	2 cut(s)	1201, 1383
AccB1I	GGYRCC	3 cut(s)	317, 1201, 1383
AccBSI	CCGCTC	2 cut(s)	67, 1228
AccI	GTMKAC	4 cut(s)	41, 186, 619, 792
AccII	CGCG	6 cut(s)	257, 348, 687, 860, 1032, 1301
AclWI	GGATC	2 cut(s)	256, 1175
AcoI	YGGCCR	2 cut(s)	303, 1053
AcuI	CTGAAG	1 cut(s)	989
AcvI	CACGTG	2 cut(s)	325, 1045
AcyI	GRCGYC	3 cut(s)	44, 158, 357
AfaI	GTAC	7 cut(s)	203, 548, 1070, 1126, 1163, 1203, 1385
AfiI	CCNNNNNNNGG	6 cut(s)	198, 543, 647, 686, 820, 859
AflIII	ACRYGT	2 cut(s)	324, 1185
AgsI	TTSAA	5 cut(s)	58, 379, 403, 1237, 1366
AjiI	CACGTC	2 cut(s)	514, 1188
AjnI	CCWGG	4 cut(s)	215, 531, 956, 1055
AjuI	GAANNNNNNNTTGG	2 cut(s)	1295, 1327
AleI	CACNNNNGTG	2 cut(s)	323, 1211
AluBI	AGCT	7 cut(s)	31, 180, 384, 487, 613, 786, 1311
AluI	AGCT	7 cut(s)	31, 180, 384, 487, 613, 786, 1311
Alw21I	GWGCWC	2 cut(s)	33, 615
Alw26I	GTCTC	3 cut(s)	12, 345, 450
AlwI	GGATC	2 cut(s)	256, 1175
Ama87I	CYCGRG	1 cut(s)	608
ApaI	GGGCCC	2 cut(s)	73, 136
ApeKI	GCWGC	2 cut(s)	99, 195
ArsI	GACNNNNNNTTYG	4 cut(s)	473, 505, 1333, 1365
Asp718I	GGTACC	2 cut(s)	1201, 1383
AspLEI	GCGC	2 cut(s)	259, 348
AsuC2I	CCSGG	6 cut(s)	48, 298, 564, 928, 1117, 1129
AsuHPI	GGTGA	5 cut(s)	499, 707, 880, 916, 1207
AvaI	CYCGRG	1 cut(s)	608
AvaII	GGWCC	7 cut(s)	244, 638, 661, 811, 834, 953, 1151
BaeGI	GKGCMC	2 cut(s)	73, 136
BalI	TGGCCA	1 cut(s)	1055
BanI	GGYRCC	3 cut(s)	317, 1201, 1383
BanII	GRGCYC	4 cut(s)	33, 73, 136, 615
BbrPI	CACGTG	2 cut(s)	325, 1045
BbsI	GAAGAC	2 cut(s)	30, 1327
Bbv12I	GWGCWC	2 cut(s)	33, 615
BbvCI	CCTCAGC	1 cut(s)	756
BbvI	GCAGC	2 cut(s)	86, 207
BccI	CCATC	2 cut(s)	1025, 1374
BceAI	ACGGC	8 cut(s)	171, 370, 451, 638, 745, 811, 1294, 1426
BcgI	CGANNNNNNTGC	4 cut(s)	427, 461, 1333, 1367
BciT130I	CCWGG	4 cut(s)	217, 533, 958, 1057
BciVI	GTATCC	1 cut(s)	1102
BcnI	CCSGG	6 cut(s)	48, 298, 564, 928, 1117, 1129
BcoDI	GTCTC	3 cut(s)	12, 345, 450
BfaI	CTAG	1 cut(s)	1426
BfuAI	ACCTGC	1 cut(s)	232
BfuI	GTATCC	1 cut(s)	1102
BglI	GCCNNNNNGGC	2 cut(s)	155, 533
BisI	GCNGC	8 cut(s)	100, 196, 277, 303, 528, 688, 861, 1229
BlsI	GCNGC	8 cut(s)	101, 197, 278, 304, 529, 689, 862, 1230
Bme18I	GGWCC	7 cut(s)	244, 638, 661, 811, 834, 953, 1151
BmeT110I	CYCGRG	1 cut(s)	608
BmgBI	CACGTC	2 cut(s)	514, 1188
BmsI	GCATC	3 cut(s)	447, 529, 1257
BpiI	GAAGAC	2 cut(s)	30, 1327
Bpu10I	CCTNAGC	1 cut(s)	756
BpuMI	CCSGG	6 cut(s)	48, 298, 564, 928, 1117, 1129
BsaAI	YACGTR	3 cut(s)	325, 1045, 1068
BsaHI	GRCGYC	3 cut(s)	44, 158, 357
BsaWI	WCCGGW	5 cut(s)	543, 658, 831, 1164, 1358
BsaXI	ACNNNNNCTCC	2 cut(s)	342, 372
Bsc4I	CCNNNNNNNGG	6 cut(s)	198, 543, 647, 686, 820, 859
Bse118I	RCCGGY	8 cut(s)	198, 305, 590, 671, 702, 844, 875, 1192
Bse1I	ACTGG	2 cut(s)	88, 229
BseBI	CCWGG	4 cut(s)	217, 533, 958, 1057
BseGI	GGATG	2 cut(s)	751, 999
BseLI	CCNNNNNNNGG	6 cut(s)	198, 543, 647, 686, 820, 859
BseMII	CTCAG	1 cut(s)	770
BseNI	ACTGG	2 cut(s)	88, 229
BseRI	GAGGAG	1 cut(s)	413
BseSI	GKGCMC	2 cut(s)	73, 136
BseX3I	CGGCCG	1 cut(s)	303
BseXI	GCAGC	2 cut(s)	86, 207
Bsh1236I	CGCG	6 cut(s)	257, 348, 687, 860, 1032, 1301
Bsh1285I	CGRYCG	4 cut(s)	306, 659, 832, 1347
BshNI	GGYRCC	3 cut(s)	317, 1201, 1383
BsiEI	CGRYCG	4 cut(s)	306, 659, 832, 1347
BsiHKAI	GWGCWC	2 cut(s)	33, 615
BsiHKCI	CYCGRG	1 cut(s)	608
BslFI	GGGAC	3 cut(s)	624, 797, 1164
BslI	CCNNNNNNNGG	6 cut(s)	198, 543, 647, 686, 820, 859
BsmAI	GTCTC	3 cut(s)	12, 345, 450
BsmBI	CGTCTC	2 cut(s)	12, 345
BsmFI	GGGAC	3 cut(s)	624, 797, 1164
BsoBI	CYCGRG	1 cut(s)	608
Bsp120I	GGGCCC	2 cut(s)	69, 132
Bsp1286I	GDGCHC	4 cut(s)	33, 73, 136, 615
Bsp143I	GATC	6 cut(s)	60, 144, 261, 748, 921, 1167
Bsp19I	CCATGG	2 cut(s)	330, 552
BspCNI	CTCAG	1 cut(s)	769
BspFNI	CGCG	6 cut(s)	257, 348, 687, 860, 1032, 1301
BspMI	ACCTGC	1 cut(s)	232
BspPI	GGATC	2 cut(s)	256, 1175
BspQI	GCTCTTC	2 cut(s)	38, 494
BspT107I	GGYRCC	3 cut(s)	317, 1201, 1383
BsrBI	CCGCTC	2 cut(s)	67, 1228
BsrFI	RCCGGY	8 cut(s)	198, 305, 590, 671, 702, 844, 875, 1192
BsrI	ACTGG	2 cut(s)	88, 229
BssAI	RCCGGY	8 cut(s)	198, 305, 590, 671, 702, 844, 875, 1192
BssMI	GATC	6 cut(s)	60, 144, 261, 748, 921, 1167
BssNI	GRCGYC	3 cut(s)	44, 158, 357
BssT1I	CCWWGG	2 cut(s)	330, 552
Bst2UI	CCWGG	4 cut(s)	217, 533, 958, 1057
Bst4CI	ACNGT	6 cut(s)	269, 499, 946, 1161, 1201, 1400
Bst6I	CTCTTC	5 cut(s)	38, 143, 494, 1115, 1244
BstACI	GRCGYC	3 cut(s)	44, 158, 357
BstBAI	YACGTR	3 cut(s)	325, 1045, 1068
BstC8I	GCNNGC	8 cut(s)	69, 592, 673, 677, 704, 850, 877, 1299
BstDEI	CTNAG	1 cut(s)	756
BstDSI	CCRYGG	5 cut(s)	330, 433, 498, 552, 1030
BstEII	GGTNACC	1 cut(s)	292
BstF5I	GGATG	2 cut(s)	751, 999
BstFNI	CGCG	6 cut(s)	257, 348, 687, 860, 1032, 1301
BstHHI	GCGC	2 cut(s)	259, 348
BstKTI	GATC	6 cut(s)	63, 147, 264, 751, 924, 1170
BstMAI	GTCTC	3 cut(s)	12, 345, 450
BstMBI	GATC	6 cut(s)	60, 144, 261, 748, 921, 1167
BstMCI	CGRYCG	4 cut(s)	306, 659, 832, 1347
BstMWI	GCNNNNNNNGC	5 cut(s)	155, 354, 484, 533, 610
BstNI	CCWGG	4 cut(s)	217, 533, 958, 1057
BstNSI	RCATGY	1 cut(s)	283
BstPI	GGTNACC	1 cut(s)	292
BstSLI	GKGCMC	2 cut(s)	73, 136
BstUI	CGCG	6 cut(s)	257, 348, 687, 860, 1032, 1301
BstV1I	GCAGC	2 cut(s)	86, 207
BstV2I	GAAGAC	2 cut(s)	30, 1327
BstX2I	RGATCY	2 cut(s)	261, 1167
BstYI	RGATCY	2 cut(s)	261, 1167
BstZI	CGGCCG	1 cut(s)	303
BsuI	GTATCC	1 cut(s)	1102
BtgI	CCRYGG	5 cut(s)	330, 433, 498, 552, 1030
BtgZI	GCGATG	1 cut(s)	571
BtrI	CACGTC	2 cut(s)	514, 1188
BtsCI	GGATG	2 cut(s)	751, 999
BtsIMutI	CAGTG	1 cut(s)	236
BveI	ACCTGC	1 cut(s)	232
Cac8I	GCNNGC	8 cut(s)	69, 592, 673, 677, 704, 850, 877, 1299
CfoI	GCGC	2 cut(s)	259, 348
Cfr10I	RCCGGY	8 cut(s)	198, 305, 590, 671, 702, 844, 875, 1192
Cfr42I	CCGCGG	1 cut(s)	1033
CpoI	CGGWCCG	2 cut(s)	661, 834
CseI	GACGC	3 cut(s)	52, 147, 346
Csp6I	GTAC	7 cut(s)	202, 547, 1069, 1125, 1162, 1202, 1384
CspI	CGGWCCG	2 cut(s)	661, 834
CviAII	CATG	7 cut(s)	79, 121, 280, 331, 517, 553, 973
CviQI	GTAC	7 cut(s)	202, 547, 1069, 1125, 1162, 1202, 1384
DdeI	CTNAG	1 cut(s)	756
DpnI	GATC	6 cut(s)	62, 146, 263, 750, 923, 1169
DpnII	GATC	6 cut(s)	60, 144, 261, 748, 921, 1167
DrdI	GACNNNNNNGTC	1 cut(s)	1082
DseDI	GACNNNNNNGTC	1 cut(s)	1082
EaeI	YGGCCR	2 cut(s)	303, 1053
EagI	CGGCCG	1 cut(s)	303
Eam1104I	CTCTTC	5 cut(s)	38, 143, 494, 1115, 1244
EarI	CTCTTC	5 cut(s)	38, 143, 494, 1115, 1244
Ecl136II	GAGCTC	2 cut(s)	31, 613
EclXI	CGGCCG	1 cut(s)	303
Eco130I	CCWWGG	2 cut(s)	330, 552
Eco24I	GRGCYC	4 cut(s)	33, 73, 136, 615
Eco47I	GGWCC	7 cut(s)	244, 638, 661, 811, 834, 953, 1151
Eco52I	CGGCCG	1 cut(s)	303
Eco53kI	GAGCTC	2 cut(s)	31, 613
Eco57I	CTGAAG	1 cut(s)	989
Eco72I	CACGTG	2 cut(s)	325, 1045
Eco88I	CYCGRG	1 cut(s)	608
Eco91I	GGTNACC	1 cut(s)	292
EcoICRI	GAGCTC	2 cut(s)	31, 613
EcoO109I	RGGNCCY	4 cut(s)	133, 638, 811, 1151
EcoO65I	GGTNACC	1 cut(s)	292
EcoRII	CCWGG	4 cut(s)	215, 531, 956, 1055
EcoT14I	CCWWGG	2 cut(s)	330, 552
EcoT22I	ATGCAT	1 cut(s)	522
EcoT38I	GRGCYC	4 cut(s)	33, 73, 136, 615
ErhI	CCWWGG	2 cut(s)	330, 552
Esp3I	CGTCTC	2 cut(s)	12, 345
FaeI	CATG	7 cut(s)	82, 124, 283, 334, 520, 556, 976
FaqI	GGGAC	3 cut(s)	624, 797, 1164
FatI	CATG	7 cut(s)	78, 120, 279, 330, 516, 552, 972
FauI	CCCGC	6 cut(s)	60, 1001, 1025, 1130, 1140, 1162
FblI	GTMKAC	4 cut(s)	41, 186, 619, 792
Fnu4HI	GCNGC	8 cut(s)	100, 196, 277, 303, 528, 688, 861, 1229
FokI	GGATG	2 cut(s)	738, 986
FriOI	GRGCYC	4 cut(s)	33, 73, 136, 615
Fsp4HI	GCNGC	8 cut(s)	100, 196, 277, 303, 528, 688, 861, 1229
FspBI	CTAG	1 cut(s)	1426
GlaI	GCGC	2 cut(s)	258, 347
GluI	GCNGC	8 cut(s)	100, 196, 277, 303, 528, 688, 861, 1229
HgaI	GACGC	3 cut(s)	52, 147, 346
HhaI	GCGC	2 cut(s)	259, 348
Hin1I	GRCGYC	3 cut(s)	44, 158, 357
Hin1II	CATG	7 cut(s)	82, 124, 283, 334, 520, 556, 976
Hin6I	GCGC	2 cut(s)	257, 346
HinP1I	GCGC	2 cut(s)	257, 346
HincII	GTYRAC	2 cut(s)	42, 187
HindII	GTYRAC	2 cut(s)	42, 187
HindIII	AAGCTT	1 cut(s)	1309
HinfI	GANTC	6 cut(s)	188, 225, 540, 651, 824, 936
HphI	GGTGA	5 cut(s)	499, 707, 880, 916, 1207
Hpy188I	TCNGA	5 cut(s)	650, 656, 823, 829, 1274
Hpy188III	TCNNGA	5 cut(s)	58, 142, 175, 608, 1021
HpyAV	CCTTC	7 cut(s)	400, 408, 514, 692, 865, 1013, 1237
HpyCH4III	ACNGT	6 cut(s)	269, 499, 946, 1161, 1201, 1400
HpyCH4IV	ACGT	6 cut(s)	324, 513, 1044, 1067, 1187, 1284
HpyCH4V	TGCA	2 cut(s)	520, 1354
HpyF10VI	GCNNNNNNNGC	5 cut(s)	155, 354, 484, 533, 610
HpyF3I	CTNAG	1 cut(s)	756
HpySE526I	ACGT	6 cut(s)	324, 513, 1044, 1067, 1187, 1284
Hsp92I	GRCGYC	3 cut(s)	44, 158, 357
Hsp92II	CATG	7 cut(s)	82, 124, 283, 334, 520, 556, 976
HspAI	GCGC	2 cut(s)	257, 346
KflI	GGGWCCC	1 cut(s)	1151
KpnI	GGTACC	2 cut(s)	1205, 1387
KroI	GCCGGC	4 cut(s)	590, 671, 702, 875
KroNI	GCCGGC	4 cut(s)	592, 673, 704, 877
KspI	CCGCGG	1 cut(s)	1033
Kzo9I	GATC	6 cut(s)	60, 144, 261, 748, 921, 1167
LguI	GCTCTTC	2 cut(s)	38, 494
LmnI	GCTCC	3 cut(s)	618, 791, 1225
Lsp1109I	GCAGC	2 cut(s)	86, 207
LweI	GCATC	3 cut(s)	447, 529, 1257
MaeI	CTAG	1 cut(s)	1426
MaeII	ACGT	6 cut(s)	324, 513, 1044, 1067, 1187, 1284
MaeIII	GTNAC	4 cut(s)	292, 598, 1195, 1400
MalI	GATC	6 cut(s)	62, 146, 263, 750, 923, 1169
MbiI	CCGCTC	2 cut(s)	67, 1228
MboI	GATC	6 cut(s)	60, 144, 261, 748, 921, 1167
MfeI	CAATTG	1 cut(s)	17
MflI	RGATCY	2 cut(s)	261, 1167
MhlI	GDGCHC	4 cut(s)	33, 73, 136, 615
MlsI	TGGCCA	1 cut(s)	1055
MluCI	AATT	2 cut(s)	17, 1174
MluNI	TGGCCA	1 cut(s)	1055
MlyI	GAGTC	2 cut(s)	182, 549
MmeI	TCCRAC	2 cut(s)	679, 852
Mox20I	TGGCCA	1 cut(s)	1055
Mph1103I	ATGCAT	1 cut(s)	522
MroNI	GCCGGC	4 cut(s)	590, 671, 702, 875
MscI	TGGCCA	1 cut(s)	1055
MseI	TTAA	3 cut(s)	627, 800, 1173
MslI	CAYNNNNRTG	2 cut(s)	323, 1211
Msp20I	TGGCCA	1 cut(s)	1055
MspA1I	CMGCKG	2 cut(s)	99, 1032
MunI	CAATTG	1 cut(s)	17
MvaI	CCWGG	4 cut(s)	217, 533, 958, 1057
MvnI	CGCG	6 cut(s)	257, 348, 687, 860, 1032, 1301
MwoI	GCNNNNNNNGC	5 cut(s)	155, 354, 484, 533, 610
NaeI	GCCGGC	4 cut(s)	592, 673, 704, 877
NciI	CCSGG	6 cut(s)	48, 298, 564, 928, 1117, 1129
NcoI	CCATGG	2 cut(s)	330, 552
NdeII	GATC	6 cut(s)	60, 144, 261, 748, 921, 1167
NgoMIV	GCCGGC	4 cut(s)	590, 671, 702, 875
NlaIII	CATG	7 cut(s)	82, 124, 283, 334, 520, 556, 976
NmeAIII	GCCGAG	1 cut(s)	188
NmuCI	GTSAC	2 cut(s)	598, 1195
NsiI	ATGCAT	1 cut(s)	522
NspI	RCATGY	1 cut(s)	283
OliI	CACNNNNGTG	2 cut(s)	323, 1211
PaeR7I	CTCGAG	1 cut(s)	608
PasI	CCCWGGG	1 cut(s)	957
PciSI	GCTCTTC	2 cut(s)	38, 494
PcsI	WCGNNNNNNNCGW	5 cut(s)	321, 594, 628, 801, 1278
PdiI	GCCGGC	4 cut(s)	592, 673, 704, 877
PfeI	GAWTC	4 cut(s)	225, 651, 824, 936
PflFI	GACNNNGTC	4 cut(s)	356, 636, 809, 1082
PfoI	TCCNGGA	1 cut(s)	1115
PkrI	GCNGC	8 cut(s)	101, 197, 278, 304, 529, 689, 862, 1230
PleI	GAGTC	2 cut(s)	182, 548
PmaCI	CACGTG	2 cut(s)	325, 1045
PmlI	CACGTG	2 cut(s)	325, 1045
PpsI	GAGTC	2 cut(s)	182, 548
Ppu21I	YACGTR	3 cut(s)	325, 1045, 1068
PpuMI	RGGWCCY	3 cut(s)	638, 811, 1151
Psp124BI	GAGCTC	2 cut(s)	33, 615
Psp5II	RGGWCCY	3 cut(s)	638, 811, 1151
Psp6I	CCWGG	4 cut(s)	215, 531, 956, 1055
PspCI	CACGTG	2 cut(s)	325, 1045
PspEI	GGTNACC	1 cut(s)	292
PspGI	CCWGG	4 cut(s)	215, 531, 956, 1055
PspOMI	GGGCCC	2 cut(s)	69, 132
PspPPI	RGGWCCY	3 cut(s)	638, 811, 1151
PsuI	RGATCY	2 cut(s)	261, 1167
PsyI	GACNNNGTC	4 cut(s)	356, 636, 809, 1082
RsaI	GTAC	7 cut(s)	203, 548, 1070, 1126, 1163, 1203, 1385
RsaNI	GTAC	7 cut(s)	202, 547, 1069, 1125, 1162, 1202, 1384
RseI	CAYNNNNRTG	2 cut(s)	323, 1211
Rsr2I	CGGWCCG	2 cut(s)	661, 834
RsrII	CGGWCCG	2 cut(s)	661, 834
SacI	GAGCTC	2 cut(s)	33, 615
SacII	CCGCGG	1 cut(s)	1033
SalI	GTCGAC	2 cut(s)	40, 185
SapI	GCTCTTC	2 cut(s)	38, 494
SaqAI	TTAA	3 cut(s)	627, 800, 1173
SatI	GCNGC	8 cut(s)	100, 196, 277, 303, 528, 688, 861, 1229
Sau3AI	GATC	6 cut(s)	60, 144, 261, 748, 921, 1167
SchI	GAGTC	2 cut(s)	182, 549
SduI	GDGCHC	4 cut(s)	33, 73, 136, 615
SfaNI	GCATC	3 cut(s)	447, 529, 1257
Sfr274I	CTCGAG	1 cut(s)	608
Sfr303I	CCGCGG	1 cut(s)	1033
SgrAI	CRCCGGYG	1 cut(s)	1192
SgrBI	CCGCGG	1 cut(s)	1033
SgrDI	CGTCGACG	1 cut(s)	40
SinI	GGWCC	7 cut(s)	244, 638, 661, 811, 834, 953, 1151
SlaI	CTCGAG	1 cut(s)	608
SmiMI	CAYNNNNRTG	2 cut(s)	323, 1211
SmlI	CTYRAG	1 cut(s)	608
SmoI	CTYRAG	1 cut(s)	608
Sse9I	AATT	2 cut(s)	17, 1174
SspMI	CTAG	1 cut(s)	1426
SstI	GAGCTC	2 cut(s)	33, 615
StyI	CCWWGG	2 cut(s)	330, 552
TaaI	ACNGT	6 cut(s)	269, 499, 946, 1161, 1201, 1400
TaiI	ACGT	6 cut(s)	327, 516, 1047, 1070, 1190, 1287
TaqII	GACCGA	3 cut(s)	678, 851, 1361
TasI	AATT	2 cut(s)	17, 1174
TauI	GCSGC	6 cut(s)	279, 305, 530, 690, 863, 1231
TfiI	GAWTC	4 cut(s)	225, 651, 824, 936
Tru1I	TTAA	3 cut(s)	627, 800, 1173
Tru9I	TTAA	3 cut(s)	627, 800, 1173
TscAI	CASTG	1 cut(s)	236
TseFI	GTSAC	2 cut(s)	598, 1195
TseI	GCWGC	2 cut(s)	99, 195
Tsp45I	GTSAC	2 cut(s)	598, 1195
TspDTI	ATGAA	3 cut(s)	95, 433, 1256
TspGWI	ACGGA	5 cut(s)	274, 605, 778, 966, 1278
TspRI	CASTG	1 cut(s)	236
Tth111I	GACNNNGTC	4 cut(s)	356, 636, 809, 1082
VpaK11BI	GGWCC	7 cut(s)	244, 638, 661, 811, 834, 953, 1151
XceI	RCATGY	1 cut(s)	283
XhoI	CTCGAG	1 cut(s)	608
XmiI	GTMKAC	4 cut(s)	41, 186, 619, 792
XspI	CTAG	1 cut(s)	1426
Zsp2I	ATGCAT	1 cut(s)	522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.