Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0015089

Physical Location & Seq

Genomic Coordinates Forward (+)

26900550 .. 26903571

Gene Structure 3022 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG135800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1305 bp

ATGCCGTCTCCGTCGCAATTGGAAGACGAGCTCTTCCCGTCGACGCCGGGAAAGTTCAAGATCGAGCGGGCCCACACCATGAACCGCCAGTTCCACCGCTGCTTCGCCTCCACAAGCACCATGTTCTTGTGGGCCCTCTTCTTGATCGCCCTTACGGCGTCGTATTTGAGTTTCCAGAGCTTCGTCGACTCCGGCAGCCGGTACTTCTCGGCCTCCTGGGGAGGAATCCAGTGGGAGAAGCAGGTCCGCAACTCCGCGCAGATCCACCGCTCCGGCGGCATGTCCGTTCTGGTTACCGGGGCGGCCGGTTTCGTCGGCACCCACGTGTCCATGGCCCTGAAAAAGCGCGGAGACGGCGTCGTGGGGCTTGACAACTTCAACAGCTACTACGACCCGTCGTTGAAGAAGGCCCGAAAGAACCTCCTCAAAGGCCACGGCATCTTCATCGTCGAGGGAGATATAAACGACAACAAACTCCTCGACAAGCTCTTCGACACCGTGGCCTTCACCCACGTCATGCATCTTGCCGCTCAGGCCGGAGTCCGGTACGCCATGGAGAACCCCGGCTCTTACGTCCACAGCAACATCGCCGGCCTCGTCACGCTTCTCGAGGTATGTAAATCGGCCAATCCTCAGCCGTCGATTGTGTGGGCCTCGTCCAGCTCCGTCTACGGCTTAAACGACAAGGTCCCGTTCTCGGAATCCGACCGGACCGACCAGCCGGCGAGCCTCTACGCCGCGACGAAGAAGGCCGGCGAGGAAATCACCCACACTTACAACCACATTTACGGGCTGTCGATCACCGGGTTGAGATTCTTCACGGTTTACGGACCCTGGGGCCGACCCGACATGGCGTATTTCAGTTTTACCCGCAACATCCTTCAGGGTAAACCCATCACGATTTACCGCGGGAAGAACCACGTGGACTTGGCCAGGGATTTCACGTACATTGACGACATTGTCAAGGGTTGTTTGGGGTCCTTGGATACCTCCGGGAAGAGTACCGGGTCGGGCGGGAAGAAGCGGGGACCCGCACCGTACCGGATCTTTAATTTGGGGAACACGTCGCCGGTGACGGTACCCACACTTGTGAACATCTTGGAGCGGCATTTGAAGATGAAGGCGAAGAGGAATGTAGTGGAGATGCTCGGAAACGGCGACGTTCCGTTCACGCACGCGAACATAAGCTTGGCCCGAAGGCAAATCGGGTATAAGCCGACGACCGATTTGCAAACCGGATTGAAGAAGTTTGTTAGATGGTACCTTTCTTATTACGGTTACAATAACGGCAAACCTGTAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005996 GO:0006063 GO:0006082 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0012505 GO:0016051 GO:0016053 GO:0016853 GO:0016854 GO:0016857 GO:0019586 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032787 GO:0033481 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046364 GO:0046394 GO:0050378 GO:0050829 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0072330 GO:0097708 GO:0098542 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

434

Amino Acids

48.09

Weight (kDa)

9.64

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	94 - 277	4.7e-14	RmlD substrate binding domain
Epimerase	PF01370	96 - 330	1e-51	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	96 - 301	5.2e-09	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	97 - 416	2.4e-47	GDP-mannose 4,6 dehydratase
3Beta_HSD	PF01073	97 - 320	3.3e-13	3-beta hydroxysteroid dehydrogenase/isomerase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015089)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30440
fragaria_vesca	FvH4_4g10050
malus_domestica	MD13G1274600.v1.1 MD16G1260200.v1.1
prunus_persica	Prupe.1G099000_v2.0.a1
pyrus_communis	pycom13g28710
rosa_chinensis	RchiOBHm_Chr4g0405111
rosa_laevigata	RLG00000008874
rosa_multiflora	Rmu_sc0001744.1_g000052 Rmu_ssc0000255.1_g000051
rosa_roxburghii	Rroxscaffold_5G00349280
rosa_rugosa	Rorug04G0053500
rosa_samantha	Rh4BG122100 Rh4CG135800 Rh4DG122300
rosa_wichuraiana	Rw4G010380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	959
Acc36I	ACCTGC	1 cut(s)	232
Acc65I	GGTACC	2 cut(s)	1078, 1260
AccB1I	GGYRCC	3 cut(s)	317, 1078, 1260
AccBSI	CCGCTC	4 cut(s)	67, 270, 530, 1105
AccI	GTMKAC	3 cut(s)	41, 186, 669
AccII	CGCG	5 cut(s)	257, 348, 740, 909, 1178
AclWI	GGATC	2 cut(s)	256, 1052
AcoI	YGGCCR	3 cut(s)	303, 624, 930
AcuI	CTGAAG	1 cut(s)	866
AcvI	CACGTG	2 cut(s)	325, 922
AcyI	GRCGYC	3 cut(s)	44, 158, 357
AfaI	GTAC	7 cut(s)	203, 548, 947, 1003, 1040, 1080, 1262
AfiI	CCNNNNNNNGG	3 cut(s)	198, 543, 697
AflIII	ACRYGT	2 cut(s)	324, 1062
AgsI	TTSAA	5 cut(s)	58, 379, 403, 1114, 1243
AjiI	CACGTC	2 cut(s)	514, 1065
AjnI	CCWGG	3 cut(s)	215, 833, 932
AjuI	GAANNNNNNNTTGG	2 cut(s)	1172, 1204
AleI	CACNNNNGTG	2 cut(s)	323, 1088
AluBI	AGCT	6 cut(s)	31, 180, 384, 487, 663, 1188
AluI	AGCT	6 cut(s)	31, 180, 384, 487, 663, 1188
Alw21I	GWGCWC	1 cut(s)	33
Alw26I	GTCTC	2 cut(s)	12, 345
AlwI	GGATC	2 cut(s)	256, 1052
Ama87I	CYCGRG	1 cut(s)	608
ApaI	GGGCCC	2 cut(s)	73, 136
ApeKI	GCWGC	2 cut(s)	99, 195
ArsI	GACNNNNNNTTYG	4 cut(s)	473, 505, 1210, 1242
Asp718I	GGTACC	2 cut(s)	1078, 1260
AspLEI	GCGC	2 cut(s)	259, 348
AsuC2I	CCSGG	6 cut(s)	48, 298, 564, 805, 994, 1006
AsuHPI	GGTGA	4 cut(s)	499, 757, 793, 1084
AvaI	CYCGRG	1 cut(s)	608
AvaII	GGWCC	6 cut(s)	244, 688, 711, 830, 978, 1028
BaeGI	GKGCMC	2 cut(s)	73, 136
BalI	TGGCCA	1 cut(s)	932
BanI	GGYRCC	3 cut(s)	317, 1078, 1260
BanII	GRGCYC	3 cut(s)	33, 73, 136
BbrPI	CACGTG	2 cut(s)	325, 922
BbsI	GAAGAC	1 cut(s)	30
Bbv12I	GWGCWC	1 cut(s)	33
BbvCI	CCTCAGC	1 cut(s)	633
BbvI	GCAGC	2 cut(s)	86, 207
BccI	CCATC	2 cut(s)	902, 1251
BceAI	ACGGC	7 cut(s)	171, 370, 451, 622, 688, 1171, 1303
BcgI	CGANNNNNNTGC	4 cut(s)	427, 461, 1210, 1244
BciT130I	CCWGG	3 cut(s)	217, 835, 934
BciVI	GTATCC	1 cut(s)	979
BcnI	CCSGG	6 cut(s)	48, 298, 564, 805, 994, 1006
BcoDI	GTCTC	2 cut(s)	12, 345
BfaI	CTAG	1 cut(s)	1303
BfuAI	ACCTGC	1 cut(s)	232
BfuI	GTATCC	1 cut(s)	979
BglI	GCCNNNNNGGC	2 cut(s)	155, 533
BisI	GCNGC	7 cut(s)	100, 196, 277, 303, 528, 738, 1106
BlsI	GCNGC	7 cut(s)	101, 197, 278, 304, 529, 739, 1107
Bme1390I	CCNGG	9 cut(s)	48, 217, 298, 564, 805, 835, 934, 994, 1006
Bme18I	GGWCC	6 cut(s)	244, 688, 711, 830, 978, 1028
BmeT110I	CYCGRG	1 cut(s)	608
BmgBI	CACGTC	2 cut(s)	514, 1065
BmrFI	CCNGG	9 cut(s)	48, 217, 298, 564, 805, 835, 934, 994, 1006
BmsI	GCATC	3 cut(s)	447, 529, 1134
BpiI	GAAGAC	1 cut(s)	30
Bpu10I	CCTNAGC	2 cut(s)	531, 633
BpuMI	CCSGG	6 cut(s)	48, 298, 564, 805, 994, 1006
BsaAI	YACGTR	3 cut(s)	325, 922, 945
BsaHI	GRCGYC	3 cut(s)	44, 158, 357
BsaWI	WCCGGW	4 cut(s)	543, 708, 1041, 1235
BsaXI	ACNNNNNCTCC	2 cut(s)	342, 372
Bsc4I	CCNNNNNNNGG	3 cut(s)	198, 543, 697
Bse118I	RCCGGY	6 cut(s)	198, 305, 590, 721, 752, 1069
Bse1I	ACTGG	2 cut(s)	88, 229
BseBI	CCWGG	3 cut(s)	217, 835, 934
BseGI	GGATG	1 cut(s)	876
BseLI	CCNNNNNNNGG	3 cut(s)	198, 543, 697
BseMII	CTCAG	2 cut(s)	545, 647
BseNI	ACTGG	2 cut(s)	88, 229
BseRI	GAGGAG	2 cut(s)	413, 467
BseSI	GKGCMC	2 cut(s)	73, 136
BseX3I	CGGCCG	1 cut(s)	303
BseXI	GCAGC	2 cut(s)	86, 207
Bsh1236I	CGCG	5 cut(s)	257, 348, 740, 909, 1178
Bsh1285I	CGRYCG	3 cut(s)	306, 709, 1224
BshNI	GGYRCC	3 cut(s)	317, 1078, 1260
BsiEI	CGRYCG	3 cut(s)	306, 709, 1224
BsiHKAI	GWGCWC	1 cut(s)	33
BsiHKCI	CYCGRG	1 cut(s)	608
BslFI	GGGAC	2 cut(s)	674, 1041
BslI	CCNNNNNNNGG	3 cut(s)	198, 543, 697
BsmAI	GTCTC	2 cut(s)	12, 345
BsmBI	CGTCTC	2 cut(s)	12, 345
BsmFI	GGGAC	2 cut(s)	674, 1041
BsoBI	CYCGRG	1 cut(s)	608
Bsp120I	GGGCCC	2 cut(s)	69, 132
Bsp1286I	GDGCHC	3 cut(s)	33, 73, 136
Bsp143I	GATC	5 cut(s)	60, 144, 261, 798, 1044
Bsp19I	CCATGG	2 cut(s)	330, 552
BspCNI	CTCAG	2 cut(s)	544, 646
BspFNI	CGCG	5 cut(s)	257, 348, 740, 909, 1178
BspMI	ACCTGC	1 cut(s)	232
BspPI	GGATC	2 cut(s)	256, 1052
BspQI	GCTCTTC	2 cut(s)	38, 494
BspT107I	GGYRCC	3 cut(s)	317, 1078, 1260
BsrBI	CCGCTC	4 cut(s)	67, 270, 530, 1105
BsrFI	RCCGGY	6 cut(s)	198, 305, 590, 721, 752, 1069
BsrI	ACTGG	2 cut(s)	88, 229
BssAI	RCCGGY	6 cut(s)	198, 305, 590, 721, 752, 1069
BssMI	GATC	5 cut(s)	60, 144, 261, 798, 1044
BssNI	GRCGYC	3 cut(s)	44, 158, 357
BssT1I	CCWWGG	3 cut(s)	330, 552, 981
Bst2UI	CCWGG	3 cut(s)	217, 835, 934
Bst4CI	ACNGT	5 cut(s)	499, 823, 1038, 1078, 1277
Bst6I	CTCTTC	5 cut(s)	38, 143, 494, 992, 1121
BstACI	GRCGYC	3 cut(s)	44, 158, 357
BstBAI	YACGTR	3 cut(s)	325, 922, 945
BstC8I	GCNNGC	6 cut(s)	69, 592, 723, 727, 754, 1176
BstDEI	CTNAG	2 cut(s)	531, 633
BstDSI	CCRYGG	5 cut(s)	330, 433, 498, 552, 907
BstEII	GGTNACC	1 cut(s)	292
BstF5I	GGATG	1 cut(s)	876
BstFNI	CGCG	5 cut(s)	257, 348, 740, 909, 1178
BstHHI	GCGC	2 cut(s)	259, 348
BstKTI	GATC	5 cut(s)	63, 147, 264, 801, 1047
BstMAI	GTCTC	2 cut(s)	12, 345
BstMBI	GATC	5 cut(s)	60, 144, 261, 798, 1044
BstMCI	CGRYCG	3 cut(s)	306, 709, 1224
BstMWI	GCNNNNNNNGC	4 cut(s)	155, 276, 354, 533
BstNI	CCWGG	3 cut(s)	217, 835, 934
BstNSI	RCATGY	1 cut(s)	283
BstPI	GGTNACC	1 cut(s)	292
BstSCI	CCNGG	9 cut(s)	46, 215, 296, 562, 803, 833, 932, 992, 1004
BstSLI	GKGCMC	2 cut(s)	73, 136
BstUI	CGCG	5 cut(s)	257, 348, 740, 909, 1178
BstV1I	GCAGC	2 cut(s)	86, 207
BstV2I	GAAGAC	1 cut(s)	30
BstX2I	RGATCY	2 cut(s)	261, 1044
BstYI	RGATCY	2 cut(s)	261, 1044
BstZI	CGGCCG	1 cut(s)	303
BsuI	GTATCC	1 cut(s)	979
BtgI	CCRYGG	5 cut(s)	330, 433, 498, 552, 907
BtgZI	GCGATG	1 cut(s)	571
BtrI	CACGTC	2 cut(s)	514, 1065
BtsCI	GGATG	1 cut(s)	876
BtsIMutI	CAGTG	1 cut(s)	236
BveI	ACCTGC	1 cut(s)	232
Cac8I	GCNNGC	6 cut(s)	69, 592, 723, 727, 754, 1176
CfoI	GCGC	2 cut(s)	259, 348
Cfr10I	RCCGGY	6 cut(s)	198, 305, 590, 721, 752, 1069
Cfr42I	CCGCGG	1 cut(s)	910
CpoI	CGGWCCG	1 cut(s)	711
CseI	GACGC	3 cut(s)	52, 147, 346
Csp6I	GTAC	7 cut(s)	202, 547, 946, 1002, 1039, 1079, 1261
CspI	CGGWCCG	1 cut(s)	711
CviAII	CATG	7 cut(s)	79, 121, 280, 331, 517, 553, 850
CviQI	GTAC	7 cut(s)	202, 547, 946, 1002, 1039, 1079, 1261
DdeI	CTNAG	2 cut(s)	531, 633
DpnI	GATC	5 cut(s)	62, 146, 263, 800, 1046
DpnII	GATC	5 cut(s)	60, 144, 261, 798, 1044
DrdI	GACNNNNNNGTC	1 cut(s)	959
DseDI	GACNNNNNNGTC	1 cut(s)	959
EaeI	YGGCCR	3 cut(s)	303, 624, 930
EagI	CGGCCG	1 cut(s)	303
Eam1104I	CTCTTC	5 cut(s)	38, 143, 494, 992, 1121
EarI	CTCTTC	5 cut(s)	38, 143, 494, 992, 1121
Ecl136II	GAGCTC	1 cut(s)	31
EclXI	CGGCCG	1 cut(s)	303
Eco130I	CCWWGG	3 cut(s)	330, 552, 981
Eco24I	GRGCYC	3 cut(s)	33, 73, 136
Eco47I	GGWCC	6 cut(s)	244, 688, 711, 830, 978, 1028
Eco52I	CGGCCG	1 cut(s)	303
Eco53kI	GAGCTC	1 cut(s)	31
Eco57I	CTGAAG	1 cut(s)	866
Eco72I	CACGTG	2 cut(s)	325, 922
Eco88I	CYCGRG	1 cut(s)	608
Eco91I	GGTNACC	1 cut(s)	292
EcoICRI	GAGCTC	1 cut(s)	31
EcoO109I	RGGNCCY	4 cut(s)	133, 688, 978, 1028
EcoO65I	GGTNACC	1 cut(s)	292
EcoRII	CCWGG	3 cut(s)	215, 833, 932
EcoT14I	CCWWGG	3 cut(s)	330, 552, 981
EcoT22I	ATGCAT	1 cut(s)	522
EcoT38I	GRGCYC	3 cut(s)	33, 73, 136
ErhI	CCWWGG	3 cut(s)	330, 552, 981
Esp3I	CGTCTC	2 cut(s)	12, 345
FaeI	CATG	7 cut(s)	82, 124, 283, 334, 520, 556, 853
FaqI	GGGAC	2 cut(s)	674, 1041
FatI	CATG	7 cut(s)	78, 120, 279, 330, 516, 552, 849
FauI	CCCGC	6 cut(s)	60, 878, 902, 1007, 1017, 1039
FblI	GTMKAC	3 cut(s)	41, 186, 669
Fnu4HI	GCNGC	7 cut(s)	100, 196, 277, 303, 528, 738, 1106
FokI	GGATG	1 cut(s)	863
FriOI	GRGCYC	3 cut(s)	33, 73, 136
Fsp4HI	GCNGC	7 cut(s)	100, 196, 277, 303, 528, 738, 1106
FspBI	CTAG	1 cut(s)	1303
GlaI	GCGC	2 cut(s)	258, 347
GluI	GCNGC	7 cut(s)	100, 196, 277, 303, 528, 738, 1106
HgaI	GACGC	3 cut(s)	52, 147, 346
HhaI	GCGC	2 cut(s)	259, 348
Hin1I	GRCGYC	3 cut(s)	44, 158, 357
Hin1II	CATG	7 cut(s)	82, 124, 283, 334, 520, 556, 853
Hin6I	GCGC	2 cut(s)	257, 346
HinP1I	GCGC	2 cut(s)	257, 346
HincII	GTYRAC	2 cut(s)	42, 187
HindII	GTYRAC	2 cut(s)	42, 187
HindIII	AAGCTT	1 cut(s)	1186
HinfI	GANTC	5 cut(s)	188, 225, 540, 701, 813
HphI	GGTGA	4 cut(s)	499, 757, 793, 1084
Hpy188I	TCNGA	3 cut(s)	700, 706, 1151
Hpy188III	TCNNGA	5 cut(s)	58, 142, 175, 608, 898
HpyAV	CCTTC	6 cut(s)	400, 514, 742, 890, 1114, 1191
HpyCH4III	ACNGT	5 cut(s)	499, 823, 1038, 1078, 1277
HpyCH4IV	ACGT	7 cut(s)	324, 513, 573, 921, 944, 1064, 1161
HpyCH4V	TGCA	2 cut(s)	520, 1231
HpyF10VI	GCNNNNNNNGC	4 cut(s)	155, 276, 354, 533
HpyF3I	CTNAG	2 cut(s)	531, 633
HpySE526I	ACGT	7 cut(s)	324, 513, 573, 921, 944, 1064, 1161
Hsp92I	GRCGYC	3 cut(s)	44, 158, 357
Hsp92II	CATG	7 cut(s)	82, 124, 283, 334, 520, 556, 853
HspAI	GCGC	2 cut(s)	257, 346
KflI	GGGWCCC	1 cut(s)	1028
KpnI	GGTACC	2 cut(s)	1082, 1264
KroI	GCCGGC	3 cut(s)	590, 721, 752
KroNI	GCCGGC	3 cut(s)	592, 723, 754
KspI	CCGCGG	1 cut(s)	910
Kzo9I	GATC	5 cut(s)	60, 144, 261, 798, 1044
LguI	GCTCTTC	2 cut(s)	38, 494
LmnI	GCTCC	3 cut(s)	275, 668, 1102
Lsp1109I	GCAGC	2 cut(s)	86, 207
LweI	GCATC	3 cut(s)	447, 529, 1134
MaeI	CTAG	1 cut(s)	1303
MaeII	ACGT	7 cut(s)	324, 513, 573, 921, 944, 1064, 1161
MaeIII	GTNAC	4 cut(s)	292, 598, 1072, 1277
MalI	GATC	5 cut(s)	62, 146, 263, 800, 1046
MbiI	CCGCTC	4 cut(s)	67, 270, 530, 1105
MboI	GATC	5 cut(s)	60, 144, 261, 798, 1044
MfeI	CAATTG	1 cut(s)	17
MflI	RGATCY	2 cut(s)	261, 1044
MhlI	GDGCHC	3 cut(s)	33, 73, 136
MlsI	TGGCCA	1 cut(s)	932
MluCI	AATT	2 cut(s)	17, 1051
MluNI	TGGCCA	1 cut(s)	932
MlyI	GAGTC	2 cut(s)	182, 549
MmeI	TCCRAC	1 cut(s)	729
Mox20I	TGGCCA	1 cut(s)	932
Mph1103I	ATGCAT	1 cut(s)	522
MroNI	GCCGGC	3 cut(s)	590, 721, 752
MscI	TGGCCA	1 cut(s)	932
MseI	TTAA	2 cut(s)	677, 1050
MslI	CAYNNNNRTG	2 cut(s)	323, 1088
Msp20I	TGGCCA	1 cut(s)	932
MspA1I	CMGCKG	2 cut(s)	99, 909
MspR9I	CCNGG	9 cut(s)	48, 217, 298, 564, 805, 835, 934, 994, 1006
MunI	CAATTG	1 cut(s)	17
MvaI	CCWGG	3 cut(s)	217, 835, 934
MvnI	CGCG	5 cut(s)	257, 348, 740, 909, 1178
MwoI	GCNNNNNNNGC	4 cut(s)	155, 276, 354, 533
NaeI	GCCGGC	3 cut(s)	592, 723, 754
NciI	CCSGG	6 cut(s)	48, 298, 564, 805, 994, 1006
NcoI	CCATGG	2 cut(s)	330, 552
NdeII	GATC	5 cut(s)	60, 144, 261, 798, 1044
NgoMIV	GCCGGC	3 cut(s)	590, 721, 752
NlaIII	CATG	7 cut(s)	82, 124, 283, 334, 520, 556, 853
NmeAIII	GCCGAG	1 cut(s)	188
NmuCI	GTSAC	2 cut(s)	598, 1072
NsiI	ATGCAT	1 cut(s)	522
NspI	RCATGY	1 cut(s)	283
OliI	CACNNNNGTG	2 cut(s)	323, 1088
PaeR7I	CTCGAG	1 cut(s)	608
PasI	CCCWGGG	1 cut(s)	834
PciSI	GCTCTTC	2 cut(s)	38, 494
PcsI	WCGNNNNNNNCGW	4 cut(s)	321, 594, 678, 1155
PdiI	GCCGGC	3 cut(s)	592, 723, 754
PfeI	GAWTC	3 cut(s)	225, 701, 813
PflFI	GACNNNGTC	3 cut(s)	356, 686, 959
PfoI	TCCNGGA	1 cut(s)	992
PkrI	GCNGC	7 cut(s)	101, 197, 278, 304, 529, 739, 1107
PleI	GAGTC	2 cut(s)	182, 548
PmaCI	CACGTG	2 cut(s)	325, 922
PmlI	CACGTG	2 cut(s)	325, 922
PpsI	GAGTC	2 cut(s)	182, 548
Ppu21I	YACGTR	3 cut(s)	325, 922, 945
PpuMI	RGGWCCY	3 cut(s)	688, 978, 1028
Psp124BI	GAGCTC	1 cut(s)	33
Psp5II	RGGWCCY	3 cut(s)	688, 978, 1028
Psp6I	CCWGG	3 cut(s)	215, 833, 932
PspCI	CACGTG	2 cut(s)	325, 922
PspEI	GGTNACC	1 cut(s)	292
PspGI	CCWGG	3 cut(s)	215, 833, 932
PspOMI	GGGCCC	2 cut(s)	69, 132
PspPPI	RGGWCCY	3 cut(s)	688, 978, 1028
PsuI	RGATCY	2 cut(s)	261, 1044
PsyI	GACNNNGTC	3 cut(s)	356, 686, 959
RsaI	GTAC	7 cut(s)	203, 548, 947, 1003, 1040, 1080, 1262
RsaNI	GTAC	7 cut(s)	202, 547, 946, 1002, 1039, 1079, 1261
RseI	CAYNNNNRTG	2 cut(s)	323, 1088
Rsr2I	CGGWCCG	1 cut(s)	711
RsrII	CGGWCCG	1 cut(s)	711
SacI	GAGCTC	1 cut(s)	33
SacII	CCGCGG	1 cut(s)	910
SalI	GTCGAC	2 cut(s)	40, 185
SapI	GCTCTTC	2 cut(s)	38, 494
SaqAI	TTAA	2 cut(s)	677, 1050
SatI	GCNGC	7 cut(s)	100, 196, 277, 303, 528, 738, 1106
Sau3AI	GATC	5 cut(s)	60, 144, 261, 798, 1044
SchI	GAGTC	2 cut(s)	182, 549
ScrFI	CCNGG	9 cut(s)	48, 217, 298, 564, 805, 835, 934, 994, 1006
SduI	GDGCHC	3 cut(s)	33, 73, 136
SfaNI	GCATC	3 cut(s)	447, 529, 1134
Sfr274I	CTCGAG	1 cut(s)	608
Sfr303I	CCGCGG	1 cut(s)	910
SgrAI	CRCCGGYG	1 cut(s)	1069
SgrBI	CCGCGG	1 cut(s)	910
SgrDI	CGTCGACG	1 cut(s)	40
SinI	GGWCC	6 cut(s)	244, 688, 711, 830, 978, 1028
SlaI	CTCGAG	1 cut(s)	608
SmiMI	CAYNNNNRTG	2 cut(s)	323, 1088
SmlI	CTYRAG	1 cut(s)	608
SmoI	CTYRAG	1 cut(s)	608
Sse9I	AATT	2 cut(s)	17, 1051
SspMI	CTAG	1 cut(s)	1303
SstI	GAGCTC	1 cut(s)	33
StyD4I	CCNGG	9 cut(s)	46, 215, 296, 562, 803, 833, 932, 992, 1004
StyI	CCWWGG	3 cut(s)	330, 552, 981
TaaI	ACNGT	5 cut(s)	499, 823, 1038, 1078, 1277
TaiI	ACGT	7 cut(s)	327, 516, 576, 924, 947, 1067, 1164
TaqI	TCGA	9 cut(s)	41, 63, 186, 450, 480, 492, 609, 641, 797
TaqII	GACCGA	2 cut(s)	728, 1238
TasI	AATT	2 cut(s)	17, 1051
TauI	GCSGC	5 cut(s)	279, 305, 530, 740, 1108
TfiI	GAWTC	3 cut(s)	225, 701, 813
Tru1I	TTAA	2 cut(s)	677, 1050
Tru9I	TTAA	2 cut(s)	677, 1050
TscAI	CASTG	1 cut(s)	236
TseFI	GTSAC	2 cut(s)	598, 1072
TseI	GCWGC	2 cut(s)	99, 195
Tsp45I	GTSAC	2 cut(s)	598, 1072
TspDTI	ATGAA	3 cut(s)	95, 433, 1133
TspGWI	ACGGA	4 cut(s)	274, 655, 843, 1155
TspRI	CASTG	1 cut(s)	236
Tth111I	GACNNNGTC	3 cut(s)	356, 686, 959
VpaK11BI	GGWCC	6 cut(s)	244, 688, 711, 830, 978, 1028
XceI	RCATGY	1 cut(s)	283
XhoI	CTCGAG	1 cut(s)	608
XmiI	GTMKAC	3 cut(s)	41, 186, 669
XspI	CTAG	1 cut(s)	1303
Zsp2I	ATGCAT	1 cut(s)	522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.