monooxygenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25620 AT5G25620 |
| fragaria_vesca | FvH4_2g36220 |
| malus_domestica | MD08G1119300.v1.1 MD15G1098700.v1.1 |
| prunus_persica | Prupe.1G453400_v2.0.a1 |
| pyrus_communis | pycom08g09960 pycom15g09030 |
| rosa_chinensis | RchiOBHm_Chr6g0305661 |
| rosa_laevigata | RLG00000010868 |
| rosa_multiflora | Rmu_sc0001809.1_g000034 |
| rosa_roxburghii | Rroxscaffold_7G00162460 |
| rosa_rugosa | Rorug06G0342700 Rorug06G0342800 |
| rosa_samantha | Rh6AG454500 Rh6BG447000 Rh6CG468400 Rh6DG455000 |
| rosa_wichuraiana | Rw6G039630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 431, 460 |
| Acc36I | ACCTGC | 1 cut(s) | 131 |
| AccB1I | GGYRCC | 2 cut(s) | 538, 1208 |
| AccBSI | CCGCTC | 1 cut(s) | 603 |
| AccI | GTMKAC | 1 cut(s) | 755 |
| AccII | CGCG | 4 cut(s) | 167, 447, 458, 832 |
| AciI | CCGC | 9 cut(s) | 165, 311, 414, 429, 456, 458, 603, 832, 957 |
| AclWI | GGATC | 6 cut(s) | 32, 193, 204, 563, 681, 816 |
| AcoI | YGGCCR | 1 cut(s) | 942 |
| AcsI | RAATTY | 3 cut(s) | 649, 901, 1013 |
| AcuI | CTGAAG | 1 cut(s) | 1112 |
| AcyI | GRCGYC | 1 cut(s) | 186 |
| AdeI | CACNNNGTG | 1 cut(s) | 498 |
| AfaI | GTAC | 3 cut(s) | 422, 488, 596 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 231, 307, 434, 471, 820, 861, 881, 925, 1290 |
| AgsI | TTSAA | 4 cut(s) | 359, 397, 994, 1247 |
| AjiI | CACGTC | 1 cut(s) | 727 |
| AjnI | CCWGG | 2 cut(s) | 201, 939 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 326, 358 |
| AluBI | AGCT | 5 cut(s) | 238, 289, 351, 591, 895 |
| AluI | AGCT | 5 cut(s) | 238, 289, 351, 591, 895 |
| Alw21I | GWGCWC | 1 cut(s) | 726 |
| Alw26I | GTCTC | 3 cut(s) | 395, 412, 840 |
| Alw44I | GTGCAC | 1 cut(s) | 722 |
| AlwI | GGATC | 6 cut(s) | 32, 193, 204, 563, 681, 816 |
| Ama87I | CYCGRG | 1 cut(s) | 548 |
| AoxI | GGCC | 6 cut(s) | 121, 531, 572, 695, 872, 942 |
| ApaLI | GTGCAC | 1 cut(s) | 722 |
| ApeKI | GCWGC | 6 cut(s) | 235, 337, 790, 835, 838, 892 |
| ApoI | RAATTY | 3 cut(s) | 649, 901, 1013 |
| AspLEI | GCGC | 1 cut(s) | 447 |
| AspS9I | GGNCC | 7 cut(s) | 122, 143, 453, 462, 572, 868, 884 |
| AsuC2I | CCSGG | 6 cut(s) | 120, 125, 308, 496, 856, 920 |
| AsuHPI | GGTGA | 3 cut(s) | 484, 971, 1172 |
| AvaI | CYCGRG | 1 cut(s) | 548 |
| AvaII | GGWCC | 5 cut(s) | 143, 453, 462, 868, 884 |
| BaeGI | GKGCMC | 2 cut(s) | 726, 1083 |
| BalI | TGGCCA | 1 cut(s) | 944 |
| BanI | GGYRCC | 2 cut(s) | 538, 1208 |
| BanII | GRGCYC | 1 cut(s) | 156 |
| BauI | CACGAG | 2 cut(s) | 704, 735 |
| BbsI | GAAGAC | 3 cut(s) | 63, 920, 1245 |
| Bbv12I | GWGCWC | 1 cut(s) | 726 |
| BbvCI | CCTCAGC | 1 cut(s) | 257 |
| BbvI | GCAGC | 6 cut(s) | 247, 349, 777, 822, 825, 904 |
| BccI | CCATC | 3 cut(s) | 154, 1016, 1115 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 129, 163, 198, 232 |
| BciT130I | CCWGG | 2 cut(s) | 203, 941 |
| BcnI | CCSGG | 6 cut(s) | 120, 125, 308, 496, 856, 920 |
| BcoDI | GTCTC | 3 cut(s) | 395, 412, 840 |
| BfaI | CTAG | 2 cut(s) | 192, 693 |
| BfuAI | ACCTGC | 1 cut(s) | 131 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 580, 1087 |
| BisI | GCNGC | 8 cut(s) | 165, 236, 338, 791, 833, 836, 839, 893 |
| BlsI | GCNGC | 8 cut(s) | 166, 237, 339, 792, 834, 837, 840, 894 |
| Bme1390I | CCNGG | 8 cut(s) | 120, 125, 203, 308, 496, 856, 920, 941 |
| Bme18I | GGWCC | 5 cut(s) | 143, 453, 462, 868, 884 |
| BmeT110I | CYCGRG | 1 cut(s) | 548 |
| BmgBI | CACGTC | 1 cut(s) | 727 |
| BmgT120I | GGNCC | 7 cut(s) | 122, 143, 453, 462, 572, 868, 884 |
| BmiI | GGNNCC | 6 cut(s) | 463, 540, 885, 886, 937, 1210 |
| BmrFI | CCNGG | 8 cut(s) | 120, 125, 203, 308, 496, 856, 920, 941 |
| BmrI | ACTGGG | 1 cut(s) | 412 |
| BmsI | GCATC | 3 cut(s) | 732, 1033, 1210 |
| BmuI | ACTGGG | 1 cut(s) | 412 |
| BoxI | GACNNNNGTC | 1 cut(s) | 920 |
| BpiI | GAAGAC | 3 cut(s) | 63, 920, 1245 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 392, 424, 1188, 1220 |
| BpmI | CTGGAG | 1 cut(s) | 224 |
| Bpu10I | CCTNAGC | 1 cut(s) | 257 |
| BpuEI | CTTGAG | 3 cut(s) | 224, 767, 881 |
| BpuMI | CCSGG | 6 cut(s) | 120, 125, 308, 496, 856, 920 |
| BsaHI | GRCGYC | 1 cut(s) | 186 |
| BsaI | GGTCTC | 1 cut(s) | 395 |
| BsaJI | CCNNGG | 8 cut(s) | 19, 456, 528, 534, 542, 918, 939, 1263 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 70, 100 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 231, 307, 434, 471, 820, 861, 881, 925, 1290 |
| Bse118I | RCCGGY | 1 cut(s) | 870 |
| Bse1I | ACTGG | 1 cut(s) | 418 |
| Bse3DI | GCAATG | 1 cut(s) | 1081 |
| BseBI | CCWGG | 2 cut(s) | 203, 941 |
| BseDI | CCNNGG | 8 cut(s) | 19, 456, 528, 534, 542, 918, 939, 1263 |
| BseGI | GGATG | 3 cut(s) | 851, 934, 1225 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 231, 307, 434, 471, 820, 861, 881, 925, 1290 |
| BseMI | GCAATG | 1 cut(s) | 1081 |
| BseMII | CTCAG | 1 cut(s) | 271 |
| BseNI | ACTGG | 1 cut(s) | 418 |
| BseRI | GAGGAG | 4 cut(s) | 75, 78, 87, 623 |
| BseSI | GKGCMC | 2 cut(s) | 726, 1083 |
| BseXI | GCAGC | 6 cut(s) | 247, 349, 777, 822, 825, 904 |
| BseYI | CCCAGC | 1 cut(s) | 745 |
| BsgI | GTGCAG | 1 cut(s) | 159 |
| Bsh1236I | CGCG | 4 cut(s) | 167, 447, 458, 832 |
| Bsh1285I | CGRYCG | 2 cut(s) | 253, 1295 |
| BshFI | GGCC | 6 cut(s) | 123, 533, 574, 697, 874, 944 |
| BshNI | GGYRCC | 2 cut(s) | 538, 1208 |
| BsiEI | CGRYCG | 2 cut(s) | 253, 1295 |
| BsiHKAI | GWGCWC | 1 cut(s) | 726 |
| BsiHKCI | CYCGRG | 1 cut(s) | 548 |
| BsiSI | CCGG | 7 cut(s) | 120, 125, 308, 496, 856, 871, 920 |
| BslFI | GGGAC | 2 cut(s) | 173, 870 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 231, 307, 434, 471, 820, 861, 881, 925, 1290 |
| BsmAI | GTCTC | 3 cut(s) | 395, 412, 840 |
| BsmBI | CGTCTC | 1 cut(s) | 412 |
| BsmFI | GGGAC | 2 cut(s) | 173, 870 |
| BsmI | GAATGC | 2 cut(s) | 529, 1273 |
| BsnI | GGCC | 6 cut(s) | 123, 533, 574, 697, 874, 944 |
| Bso31I | GGTCTC | 1 cut(s) | 395 |
| BsoBI | CYCGRG | 1 cut(s) | 548 |
| Bsp1286I | GDGCHC | 3 cut(s) | 156, 726, 1083 |
| Bsp1407I | TGTACA | 1 cut(s) | 594 |
| Bsp143I | GATC | 8 cut(s) | 37, 198, 209, 250, 555, 673, 808, 948 |
| BspACI | CCGC | 9 cut(s) | 165, 311, 414, 429, 456, 458, 603, 832, 957 |
| BspANI | GGCC | 6 cut(s) | 123, 533, 574, 697, 874, 944 |
| BspCNI | CTCAG | 1 cut(s) | 270 |
| BspFNI | CGCG | 4 cut(s) | 167, 447, 458, 832 |
| BspLI | GGNNCC | 6 cut(s) | 463, 540, 885, 886, 937, 1210 |
| BspMI | ACCTGC | 1 cut(s) | 131 |
| BspPI | GGATC | 6 cut(s) | 32, 193, 204, 563, 681, 816 |
| BspT107I | GGYRCC | 2 cut(s) | 538, 1208 |
| BspTNI | GGTCTC | 1 cut(s) | 395 |
| BsrBI | CCGCTC | 1 cut(s) | 603 |
| BsrDI | GCAATG | 1 cut(s) | 1081 |
| BsrFI | RCCGGY | 1 cut(s) | 870 |
| BsrGI | TGTACA | 1 cut(s) | 594 |
| BsrI | ACTGG | 1 cut(s) | 418 |
| BssAI | RCCGGY | 1 cut(s) | 870 |
| BssECI | CCNNGG | 8 cut(s) | 19, 456, 528, 534, 542, 918, 939, 1263 |
| BssMI | GATC | 8 cut(s) | 37, 198, 209, 250, 555, 673, 808, 948 |
| BssNI | GRCGYC | 1 cut(s) | 186 |
| BssSI | CACGAG | 2 cut(s) | 704, 735 |
| BssT1I | CCWWGG | 2 cut(s) | 19, 534 |
| Bst2BI | CACGAG | 2 cut(s) | 704, 735 |
| Bst2UI | CCWGG | 2 cut(s) | 203, 941 |
| Bst4CI | ACNGT | 4 cut(s) | 406, 721, 1251, 1293 |
| BstACI | GRCGYC | 1 cut(s) | 186 |
| BstAUI | TGTACA | 1 cut(s) | 594 |
| BstC8I | GCNNGC | 3 cut(s) | 156, 169, 287 |
| BstDEI | CTNAG | 2 cut(s) | 257, 876 |
| BstDSI | CCRYGG | 1 cut(s) | 456 |
| BstF5I | GGATG | 3 cut(s) | 851, 934, 1225 |
| BstFNI | CGCG | 4 cut(s) | 167, 447, 458, 832 |
| BstHHI | GCGC | 1 cut(s) | 447 |
| BstKTI | GATC | 8 cut(s) | 40, 201, 212, 253, 558, 676, 811, 951 |
| BstMAI | GTCTC | 3 cut(s) | 395, 412, 840 |
| BstMBI | GATC | 8 cut(s) | 37, 198, 209, 250, 555, 673, 808, 948 |
| BstMCI | CGRYCG | 2 cut(s) | 253, 1295 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 120, 164, 295, 444, 580, 787, 838, 1087, 1135 |
| BstNI | CCWGG | 2 cut(s) | 203, 941 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 920 |
| BstSCI | CCNGG | 8 cut(s) | 118, 123, 201, 306, 494, 854, 918, 939 |
| BstSLI | GKGCMC | 2 cut(s) | 726, 1083 |
| BstUI | CGCG | 4 cut(s) | 167, 447, 458, 832 |
| BstV1I | GCAGC | 6 cut(s) | 247, 349, 777, 822, 825, 904 |
| BstV2I | GAAGAC | 3 cut(s) | 63, 920, 1245 |
| BstX2I | RGATCY | 1 cut(s) | 673 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1054, 1152 |
| BstYI | RGATCY | 1 cut(s) | 673 |
| BsuRI | GGCC | 6 cut(s) | 123, 533, 574, 697, 874, 944 |
| BtgI | CCRYGG | 1 cut(s) | 456 |
| BtrI | CACGTC | 1 cut(s) | 727 |
| BtsCI | GGATG | 3 cut(s) | 851, 934, 1225 |
| BtsIMutI | CAGTG | 1 cut(s) | 726 |
| BveI | ACCTGC | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 3 cut(s) | 156, 169, 287 |
| CfoI | GCGC | 1 cut(s) | 447 |
| Cfr10I | RCCGGY | 1 cut(s) | 870 |
| Cfr13I | GGNCC | 7 cut(s) | 122, 143, 453, 462, 572, 868, 884 |
| Cfr42I | CCGCGG | 1 cut(s) | 459 |
| CseI | GACGC | 2 cut(s) | 175, 816 |
| Csp6I | GTAC | 3 cut(s) | 421, 487, 595 |
| CviAII | CATG | 4 cut(s) | 35, 559, 658, 772 |
| CviQI | GTAC | 3 cut(s) | 421, 487, 595 |
| DdeI | CTNAG | 2 cut(s) | 257, 876 |
| DpnI | GATC | 8 cut(s) | 39, 200, 211, 252, 557, 675, 810, 950 |
| DpnII | GATC | 8 cut(s) | 37, 198, 209, 250, 555, 673, 808, 948 |
| DraIII | CACNNNGTG | 1 cut(s) | 498 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 431, 460 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 431, 460 |
| EaeI | YGGCCR | 1 cut(s) | 942 |
| EciI | GGCGGA | 1 cut(s) | 326 |
| Eco130I | CCWWGG | 2 cut(s) | 19, 534 |
| Eco147I | AGGCCT | 2 cut(s) | 533, 697 |
| Eco24I | GRGCYC | 1 cut(s) | 156 |
| Eco31I | GGTCTC | 1 cut(s) | 395 |
| Eco47I | GGWCC | 5 cut(s) | 143, 453, 462, 868, 884 |
| Eco57I | CTGAAG | 1 cut(s) | 1112 |
| Eco88I | CYCGRG | 1 cut(s) | 548 |
| EcoO109I | RGGNCCY | 1 cut(s) | 884 |
| EcoRII | CCWGG | 2 cut(s) | 201, 939 |
| EcoT14I | CCWWGG | 2 cut(s) | 19, 534 |
| EcoT38I | GRGCYC | 1 cut(s) | 156 |
| ErhI | CCWWGG | 2 cut(s) | 19, 534 |
| Esp3I | CGTCTC | 1 cut(s) | 412 |
| FaeI | CATG | 4 cut(s) | 38, 562, 661, 775 |
| FaqI | GGGAC | 2 cut(s) | 173, 870 |
| FatI | CATG | 4 cut(s) | 34, 558, 657, 771 |
| FauI | CCCGC | 3 cut(s) | 436, 451, 596 |
| FblI | GTMKAC | 1 cut(s) | 755 |
| Fnu4HI | GCNGC | 8 cut(s) | 165, 236, 338, 791, 833, 836, 839, 893 |
| FokI | GGATG | 3 cut(s) | 838, 941, 1232 |
| FriOI | GRGCYC | 1 cut(s) | 156 |
| Fsp4HI | GCNGC | 8 cut(s) | 165, 236, 338, 791, 833, 836, 839, 893 |
| FspBI | CTAG | 2 cut(s) | 192, 693 |
| GlaI | GCGC | 1 cut(s) | 446 |
| GluI | GCNGC | 8 cut(s) | 165, 236, 338, 791, 833, 836, 839, 893 |
| GsaI | CCCAGC | 1 cut(s) | 749 |
| GsuI | CTGGAG | 1 cut(s) | 224 |
| HaeIII | GGCC | 6 cut(s) | 123, 533, 574, 697, 874, 944 |
| HapII | CCGG | 7 cut(s) | 120, 125, 308, 496, 856, 871, 920 |
| HgaI | GACGC | 2 cut(s) | 175, 816 |
| HhaI | GCGC | 1 cut(s) | 447 |
| Hin1I | GRCGYC | 1 cut(s) | 186 |
| Hin1II | CATG | 4 cut(s) | 38, 562, 661, 775 |
| Hin6I | GCGC | 1 cut(s) | 445 |
| HinP1I | GCGC | 1 cut(s) | 445 |
| HincII | GTYRAC | 1 cut(s) | 756 |
| HindII | GTYRAC | 1 cut(s) | 756 |
| HindIII | AAGCTT | 1 cut(s) | 589 |
| HinfI | GANTC | 1 cut(s) | 1034 |
| HpaII | CCGG | 7 cut(s) | 120, 125, 308, 496, 856, 871, 920 |
| HphI | GGTGA | 3 cut(s) | 484, 971, 1172 |
| Hpy166II | GTNNAC | 4 cut(s) | 453, 724, 756, 1188 |
| Hpy188I | TCNGA | 4 cut(s) | 54, 466, 713, 845 |
| Hpy188III | TCNNGA | 4 cut(s) | 241, 478, 898, 985 |
| Hpy8I | GTNNAC | 4 cut(s) | 453, 724, 756, 1188 |
| Hpy99I | CGWCG | 2 cut(s) | 832, 1318 |
| HpyAV | CCTTC | 3 cut(s) | 619, 708, 1087 |
| HpyCH4III | ACNGT | 4 cut(s) | 406, 721, 1251, 1293 |
| HpyCH4IV | ACGT | 4 cut(s) | 489, 726, 963, 997 |
| HpyCH4V | TGCA | 5 cut(s) | 140, 219, 724, 892, 980 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 120, 164, 295, 444, 580, 787, 838, 1087, 1135 |
| HpyF3I | CTNAG | 2 cut(s) | 257, 876 |
| HpySE526I | ACGT | 4 cut(s) | 489, 726, 963, 997 |
| Hsp92I | GRCGYC | 1 cut(s) | 186 |
| Hsp92II | CATG | 4 cut(s) | 38, 562, 661, 775 |
| HspAI | GCGC | 1 cut(s) | 445 |
| KflI | GGGWCCC | 1 cut(s) | 884 |
| KspI | CCGCGG | 1 cut(s) | 459 |
| Kzo9I | GATC | 8 cut(s) | 37, 198, 209, 250, 555, 673, 808, 948 |
| LmnI | GCTCC | 3 cut(s) | 205, 303, 1071 |
| Lsp1109I | GCAGC | 6 cut(s) | 247, 349, 777, 822, 825, 904 |
| LweI | GCATC | 3 cut(s) | 732, 1033, 1210 |
| MaeI | CTAG | 2 cut(s) | 192, 693 |
| MaeII | ACGT | 4 cut(s) | 489, 726, 963, 997 |
| MaeIII | GTNAC | 4 cut(s) | 490, 680, 959, 1064 |
| MalI | GATC | 8 cut(s) | 39, 200, 211, 252, 557, 675, 810, 950 |
| MbiI | CCGCTC | 1 cut(s) | 603 |
| MboI | GATC | 8 cut(s) | 37, 198, 209, 250, 555, 673, 808, 948 |
| MboII | GAAGA | 6 cut(s) | 63, 371, 925, 1038, 1239, 1250 |
| MfeI | CAATTG | 1 cut(s) | 214 |
| MflI | RGATCY | 1 cut(s) | 673 |
| MhlI | GDGCHC | 3 cut(s) | 156, 726, 1083 |
| MlsI | TGGCCA | 1 cut(s) | 944 |
| MluCI | AATT | 7 cut(s) | 214, 278, 341, 649, 901, 1013, 1230 |
| MluNI | TGGCCA | 1 cut(s) | 944 |
| MlyI | GAGTC | 1 cut(s) | 1043 |
| MmeI | TCCRAC | 4 cut(s) | 846, 913, 1133, 1235 |
| Mox20I | TGGCCA | 1 cut(s) | 944 |
| MscI | TGGCCA | 1 cut(s) | 944 |
| Msp20I | TGGCCA | 1 cut(s) | 944 |
| MspA1I | CMGCKG | 2 cut(s) | 431, 458 |
| MspI | CCGG | 7 cut(s) | 120, 125, 308, 496, 856, 871, 920 |
| MspR9I | CCNGG | 8 cut(s) | 120, 125, 203, 308, 496, 856, 920, 941 |
| MunI | CAATTG | 1 cut(s) | 214 |
| Mva1269I | GAATGC | 2 cut(s) | 529, 1273 |
| MvaI | CCWGG | 2 cut(s) | 203, 941 |
| MvnI | CGCG | 4 cut(s) | 167, 447, 458, 832 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 120, 164, 295, 444, 580, 787, 838, 1087, 1135 |
| NciI | CCSGG | 6 cut(s) | 120, 125, 308, 496, 856, 920 |
| NdeII | GATC | 8 cut(s) | 37, 198, 209, 250, 555, 673, 808, 948 |
| NlaIII | CATG | 4 cut(s) | 38, 562, 661, 775 |
| NlaIV | GGNNCC | 6 cut(s) | 463, 540, 885, 886, 937, 1210 |
| NmeAIII | GCCGAG | 3 cut(s) | 553, 567, 1288 |
| NmuCI | GTSAC | 2 cut(s) | 490, 959 |
| PaeR7I | CTCGAG | 1 cut(s) | 548 |
| PceI | AGGCCT | 2 cut(s) | 533, 697 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 97 |
| PctI | GAATGC | 2 cut(s) | 529, 1273 |
| PfoI | TCCNGGA | 1 cut(s) | 201 |
| PkrI | GCNGC | 8 cut(s) | 166, 237, 339, 792, 834, 837, 840, 894 |
| Ple19I | CGATCG | 1 cut(s) | 253 |
| PleI | GAGTC | 1 cut(s) | 1042 |
| PpsI | GAGTC | 1 cut(s) | 1042 |
| PpuMI | RGGWCCY | 1 cut(s) | 884 |
| PshAI | GACNNNNGTC | 1 cut(s) | 920 |
| Psp5II | RGGWCCY | 1 cut(s) | 884 |
| Psp6I | CCWGG | 2 cut(s) | 201, 939 |
| PspFI | CCCAGC | 1 cut(s) | 745 |
| PspGI | CCWGG | 2 cut(s) | 201, 939 |
| PspN4I | GGNNCC | 6 cut(s) | 463, 540, 885, 886, 937, 1210 |
| PspPI | GGNCC | 7 cut(s) | 122, 143, 453, 462, 572, 868, 884 |
| PspPPI | RGGWCCY | 1 cut(s) | 884 |
| PspXI | VCTCGAGB | 1 cut(s) | 548 |
| PsuI | RGATCY | 1 cut(s) | 673 |
| PvuI | CGATCG | 1 cut(s) | 253 |
| RsaI | GTAC | 3 cut(s) | 422, 488, 596 |
| RsaNI | GTAC | 3 cut(s) | 421, 487, 595 |
| SacII | CCGCGG | 1 cut(s) | 459 |
| SalI | GTCGAC | 1 cut(s) | 754 |
| SatI | GCNGC | 8 cut(s) | 165, 236, 338, 791, 833, 836, 839, 893 |
| Sau3AI | GATC | 8 cut(s) | 37, 198, 209, 250, 555, 673, 808, 948 |
| Sau96I | GGNCC | 7 cut(s) | 122, 143, 453, 462, 572, 868, 884 |
| SchI | GAGTC | 1 cut(s) | 1043 |
| ScrFI | CCNGG | 8 cut(s) | 120, 125, 203, 308, 496, 856, 920, 941 |
| SduI | GDGCHC | 3 cut(s) | 156, 726, 1083 |
| SfaNI | GCATC | 3 cut(s) | 732, 1033, 1210 |
| Sfr274I | CTCGAG | 1 cut(s) | 548 |
| Sfr303I | CCGCGG | 1 cut(s) | 459 |
| SgrBI | CCGCGG | 1 cut(s) | 459 |
| SinI | GGWCC | 5 cut(s) | 143, 453, 462, 868, 884 |
| SlaI | CTCGAG | 1 cut(s) | 548 |
| SmlI | CTYRAG | 4 cut(s) | 239, 548, 782, 896 |
| SmoI | CTYRAG | 4 cut(s) | 239, 548, 782, 896 |
| Sse9I | AATT | 7 cut(s) | 214, 278, 341, 649, 901, 1013, 1230 |
| SseBI | AGGCCT | 2 cut(s) | 533, 697 |
| SsiI | CCGC | 9 cut(s) | 165, 311, 414, 429, 456, 458, 603, 832, 957 |
| SspMI | CTAG | 2 cut(s) | 192, 693 |
| StuI | AGGCCT | 2 cut(s) | 533, 697 |
| StyD4I | CCNGG | 8 cut(s) | 118, 123, 201, 306, 494, 854, 918, 939 |
| StyI | CCWWGG | 2 cut(s) | 19, 534 |
| TaaI | ACNGT | 4 cut(s) | 406, 721, 1251, 1293 |
| TaiI | ACGT | 4 cut(s) | 492, 729, 966, 1000 |
| TaqI | TCGA | 4 cut(s) | 100, 378, 549, 755 |
| TasI | AATT | 7 cut(s) | 214, 278, 341, 649, 901, 1013, 1230 |
| TatI | WGTACW | 1 cut(s) | 594 |
| TauI | GCSGC | 2 cut(s) | 167, 835 |
| TscAI | CASTG | 1 cut(s) | 726 |
| TseFI | GTSAC | 2 cut(s) | 490, 959 |
| TseI | GCWGC | 6 cut(s) | 235, 337, 790, 835, 838, 892 |
| Tsp45I | GTSAC | 2 cut(s) | 490, 959 |
| TspDTI | ATGAA | 3 cut(s) | 37, 74, 334 |
| TspRI | CASTG | 1 cut(s) | 726 |
| VneI | GTGCAC | 1 cut(s) | 722 |
| VpaK11BI | GGWCC | 5 cut(s) | 143, 453, 462, 868, 884 |
| XapI | RAATTY | 3 cut(s) | 649, 901, 1013 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 802 |
| XhoI | CTCGAG | 1 cut(s) | 548 |
| XmiI | GTMKAC | 1 cut(s) | 755 |
| XspI | CTAG | 2 cut(s) | 192, 693 |