ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g19283 |
| rosa_chinensis | RchiOBHm_Chr4g0424291 |
| rosa_laevigata | RLG00000007489 |
| rosa_multiflora | Rmu_sc0002260.1_g000016 |
| rosa_roxburghii | Rroxscaffold_5G00366240 |
| rosa_rugosa | Rorug04G0195600 |
| rosa_samantha | Rh4AG252400 Rh4BG257900 Rh4CG268500 Rh4DG252200 |
| rosa_wichuraiana | Rw4G021770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 138 |
| AclWI | GGATC | 1 cut(s) | 14 |
| AcoI | YGGCCR | 3 cut(s) | 172, 216, 346 |
| AcsI | RAATTY | 1 cut(s) | 154 |
| AfaI | GTAC | 4 cut(s) | 306, 311, 403, 414 |
| AluBI | AGCT | 2 cut(s) | 14, 55 |
| AluI | AGCT | 2 cut(s) | 14, 55 |
| Alw26I | GTCTC | 1 cut(s) | 460 |
| AlwI | GGATC | 1 cut(s) | 14 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 17 |
| AoxI | GGCC | 4 cut(s) | 75, 172, 216, 346 |
| ApeKI | GCWGC | 1 cut(s) | 14 |
| ApoI | RAATTY | 1 cut(s) | 154 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 56, 291 |
| AspS9I | GGNCC | 1 cut(s) | 76 |
| BalI | TGGCCA | 3 cut(s) | 174, 218, 348 |
| BccI | CCATC | 4 cut(s) | 87, 183, 208, 374 |
| BceAI | ACGGC | 1 cut(s) | 90 |
| BcoDI | GTCTC | 1 cut(s) | 460 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| BmgT120I | GGNCC | 1 cut(s) | 76 |
| BpuEI | CTTGAG | 1 cut(s) | 144 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 87, 117 |
| Bse1I | ACTGG | 1 cut(s) | 349 |
| Bse3DI | GCAATG | 1 cut(s) | 54 |
| BseGI | GGATG | 2 cut(s) | 79, 219 |
| BseMI | GCAATG | 1 cut(s) | 54 |
| BseNI | ACTGG | 1 cut(s) | 349 |
| BseRI | GAGGAG | 2 cut(s) | 261, 264 |
| Bsh1285I | CGRYCG | 1 cut(s) | 142 |
| BshFI | GGCC | 4 cut(s) | 77, 174, 218, 348 |
| BsiEI | CGRYCG | 1 cut(s) | 142 |
| BsmAI | GTCTC | 1 cut(s) | 460 |
| BsnI | GGCC | 4 cut(s) | 77, 174, 218, 348 |
| Bsp143I | GATC | 2 cut(s) | 19, 454 |
| BspACI | CCGC | 1 cut(s) | 138 |
| BspANI | GGCC | 4 cut(s) | 77, 174, 218, 348 |
| BspPI | GGATC | 1 cut(s) | 14 |
| BspQI | GCTCTTC | 1 cut(s) | 104 |
| BsrDI | GCAATG | 1 cut(s) | 54 |
| BsrI | ACTGG | 1 cut(s) | 349 |
| BssMI | GATC | 2 cut(s) | 19, 454 |
| Bst4CI | ACNGT | 3 cut(s) | 291, 309, 386 |
| Bst6I | CTCTTC | 1 cut(s) | 104 |
| BstF5I | GGATG | 2 cut(s) | 79, 219 |
| BstKTI | GATC | 2 cut(s) | 22, 457 |
| BstMAI | GTCTC | 1 cut(s) | 460 |
| BstMBI | GATC | 2 cut(s) | 19, 454 |
| BstMCI | CGRYCG | 1 cut(s) | 142 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 215 |
| BsuRI | GGCC | 4 cut(s) | 77, 174, 218, 348 |
| BtsCI | GGATG | 2 cut(s) | 79, 219 |
| BtsI | GCAGTG | 1 cut(s) | 108 |
| BtsIMutI | CAGTG | 1 cut(s) | 108 |
| CaiI | CAGNNNCTG | 1 cut(s) | 17 |
| Cfr13I | GGNCC | 1 cut(s) | 76 |
| Csp6I | GTAC | 4 cut(s) | 305, 310, 402, 413 |
| CviAII | CATG | 1 cut(s) | 220 |
| CviJI | RGCY | 8 cut(s) | 14, 34, 55, 77, 174, 218, 253, 348 |
| CviKI_1 | RGCY | 8 cut(s) | 14, 34, 55, 77, 174, 218, 253, 348 |
| CviQI | GTAC | 4 cut(s) | 305, 310, 402, 413 |
| DpnI | GATC | 2 cut(s) | 21, 456 |
| DpnII | GATC | 2 cut(s) | 19, 454 |
| EaeI | YGGCCR | 3 cut(s) | 172, 216, 346 |
| Eam1104I | CTCTTC | 1 cut(s) | 104 |
| EarI | CTCTTC | 1 cut(s) | 104 |
| EcoRI | GAATTC | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 223 |
| FaiI | YATR | 5 cut(s) | 221, 256, 329, 375, 432 |
| FatI | CATG | 1 cut(s) | 219 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| FokI | GGATG | 2 cut(s) | 66, 226 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| GluI | GCNGC | 1 cut(s) | 15 |
| HaeIII | GGCC | 4 cut(s) | 77, 174, 218, 348 |
| Hin1II | CATG | 1 cut(s) | 223 |
| HinfI | GANTC | 1 cut(s) | 8 |
| Hpy166II | GTNNAC | 3 cut(s) | 287, 305, 354 |
| Hpy188III | TCNNGA | 1 cut(s) | 143 |
| Hpy8I | GTNNAC | 3 cut(s) | 287, 305, 354 |
| HpyAV | CCTTC | 4 cut(s) | 45, 196, 275, 428 |
| HpyCH4III | ACNGT | 3 cut(s) | 291, 309, 386 |
| HpyCH4IV | ACGT | 1 cut(s) | 280 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 215 |
| HpySE526I | ACGT | 1 cut(s) | 280 |
| Hsp92II | CATG | 1 cut(s) | 223 |
| Kzo9I | GATC | 2 cut(s) | 19, 454 |
| LguI | GCTCTTC | 1 cut(s) | 104 |
| LmnI | GCTCC | 1 cut(s) | 423 |
| LpnPI | CCDG | 5 cut(s) | 97, 285, 330, 362, 390 |
| MaeII | ACGT | 1 cut(s) | 280 |
| MaeIII | GTNAC | 3 cut(s) | 103, 128, 334 |
| MalI | GATC | 2 cut(s) | 21, 456 |
| MboI | GATC | 2 cut(s) | 19, 454 |
| MboII | GAAGA | 1 cut(s) | 121 |
| MlsI | TGGCCA | 3 cut(s) | 174, 218, 348 |
| MluCI | AATT | 2 cut(s) | 154, 370 |
| MluNI | TGGCCA | 3 cut(s) | 174, 218, 348 |
| MmeI | TCCRAC | 2 cut(s) | 204, 320 |
| MnlI | CCTC | 5 cut(s) | 229, 279, 282, 285, 439 |
| Mox20I | TGGCCA | 3 cut(s) | 174, 218, 348 |
| MroXI | GAANNNNTTC | 2 cut(s) | 56, 291 |
| MscI | TGGCCA | 3 cut(s) | 174, 218, 348 |
| MseI | TTAA | 1 cut(s) | 472 |
| MslI | CAYNNNNRTG | 1 cut(s) | 84 |
| Msp20I | TGGCCA | 3 cut(s) | 174, 218, 348 |
| MspA1I | CMGCKG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 215 |
| NdeII | GATC | 2 cut(s) | 19, 454 |
| NlaIII | CATG | 1 cut(s) | 223 |
| NmuCI | GTSAC | 2 cut(s) | 103, 128 |
| PciSI | GCTCTTC | 1 cut(s) | 104 |
| PdmI | GAANNNNTTC | 2 cut(s) | 56, 291 |
| PfeI | GAWTC | 1 cut(s) | 8 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| PspPI | GGNCC | 1 cut(s) | 76 |
| PstNI | CAGNNNCTG | 1 cut(s) | 17 |
| PvuII | CAGCTG | 1 cut(s) | 14 |
| RsaI | GTAC | 4 cut(s) | 306, 311, 403, 414 |
| RsaNI | GTAC | 4 cut(s) | 305, 310, 402, 413 |
| RseI | CAYNNNNRTG | 1 cut(s) | 84 |
| SapI | GCTCTTC | 1 cut(s) | 104 |
| SaqAI | TTAA | 1 cut(s) | 472 |
| SatI | GCNGC | 1 cut(s) | 15 |
| Sau3AI | GATC | 2 cut(s) | 19, 454 |
| Sau96I | GGNCC | 1 cut(s) | 76 |
| SetI | ASST | 9 cut(s) | 16, 57, 172, 207, 267, 283, 304, 409, 450 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 84 |
| SmlI | CTYRAG | 1 cut(s) | 159 |
| SmoI | CTYRAG | 1 cut(s) | 159 |
| Sse9I | AATT | 2 cut(s) | 154, 370 |
| SsiI | CCGC | 1 cut(s) | 138 |
| TaaI | ACNGT | 3 cut(s) | 291, 309, 386 |
| TaiI | ACGT | 1 cut(s) | 283 |
| TaqI | TCGA | 1 cut(s) | 142 |
| TasI | AATT | 2 cut(s) | 154, 370 |
| TfiI | GAWTC | 1 cut(s) | 8 |
| Tru1I | TTAA | 1 cut(s) | 472 |
| Tru9I | TTAA | 1 cut(s) | 472 |
| TscAI | CASTG | 1 cut(s) | 108 |
| TseFI | GTSAC | 2 cut(s) | 103, 128 |
| TseI | GCWGC | 1 cut(s) | 14 |
| Tsp45I | GTSAC | 2 cut(s) | 103, 128 |
| TspDTI | ATGAA | 3 cut(s) | 27, 65, 447 |
| TspRI | CASTG | 1 cut(s) | 108 |
| XapI | RAATTY | 1 cut(s) | 154 |
| XmnI | GAANNNNTTC | 2 cut(s) | 56, 291 |