Rmu_sc0002510.1_g000026

Protein of unknown function, DUF547

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002510.1
Physical Location & Seq
Reverse (-)
105698 .. 109523
3826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002510.1_g000026.1.cds

Sequence Viewer

Length: 1797 bp
atggagggagtttcaaaacacaaacgctccaatagtgacccggtgaaaagaaaggttgggaaggataaattgaatagcatcatcttagctccttacagacttggaaatagagaaatgggaagaccaaacagctgtgtcgaagagcaacccaattgttctgatgttcaaggttctttaaatcaggaggaccaacttgtggcacgccatgctttagagaaggctttaagttatcagcacctatcatacgatactacgatcgaagactcactcccaaagtctgccaaggacctaataaaggacattacagttttagaactagaagttgtctttttggagcgccatcttctatccttatacaggaaaacgtttgatcaatgcataccatctgaattgactgtggccgaaagacagagttcttcttcagtcacacatgaaggaagttataaagaagtttctggacaagatgttacaccagaaagtaacaaaaccatcacctacactgatgatcttacattgcctcggagtacatctggcaaaccattcaaggaatgcaatggcatatgggaaccagaaaaactgttagatttgagcattcatcgttgctattcctccctgtctcagcgttcaacttgttcaccgaaaacttctcctcgaacaaaatgtcaaactaaaaatgtagattcataccactccttacctttctcaatgctagagcaagcgcagtttgcaacttcaaatttatatgcagaagaacatcttggaagttatttctctgatcatgttccagaaacaccaaacagcctttctgaagaaatgatcaagtgcatttcagcaatatattgtgaacttgctgacccgcctattatcaataacggttacacttgctctccaatcacattctcagcaccaatgcatgacttttcgtcacaggctgaaagtgaaaagtggagttcccggcgcacgaaaattccgtttttcaattcacaatctgaaaagcctatccactttgaaggatcagaagaattgagtggaccttactgtagaatgctaaaggtacagtgcatcagtgaggatacggagaagttaagagatgttgaccacacactaaagaaatttagctcacttgtttatcagttggaaggagtggatctcagaaagatgaaacatgaagagaagttagccttttggattaacgtgcacaatgctctcgttatgcatacatttttaacatatgggattccacaaaattattcaaaaagagtttcattgccactcaagtctgcatataatgtgggaggtcacaccataagtgtagacatgatacagaggtccattttggggtgcagattgcctcgtcctggacaatggctgcggctgttgtttaccatgaaaacaaagttcaaggctggagatgcgcgcaaatcgtatgcaattgagcaacctgaacctctcttgcattttgcactctgctcaggaagctattccgatcctgcggtacgtatgtacacatcaaagagagtgtttgaggagctggaaactgcaaaagaggagtacatccaatcaactttccttctgcacaaggaacagaaaatccttcttccaaagattgtggagtcatttgcaaaggactcaggattatgctctgccggtttggtagagatgattgagcgtttactgcctaactctgaaagaaaaagtaatcaccagtgccaacagagaagaatatggaaggcaattgattggactcctcacaactttactttccgctatcttatcccaaaagaagtagcttggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

598

Amino Acids

68.33

Weight (kDa)

7.55

Isoelectric Point (pI)

48.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 444
AccB7I CCANNNNNTGG 1 cut(s) 196
AccI GTMKAC 1 cut(s) 1314
AccII CGCG 1 cut(s) 1417
AciI CCGC 4 cut(s) 857, 1372, 1493, 1765
AclI AACGTT 1 cut(s) 365
AclWI GGATC 3 cut(s) 1021, 1155, 1481
AcoI YGGCCR 1 cut(s) 399
AcsI RAATTY 3 cut(s) 736, 966, 1112
AcuI CTGAAG 2 cut(s) 405, 828
AfaI GTAC 5 cut(s) 526, 1056, 1497, 1505, 1553
AfiI CCNNNNNNNGG 5 cut(s) 196, 295, 357, 1338, 1358
AhdI GACNNNNNGTC 1 cut(s) 922
AjnI CCWGG 1 cut(s) 1357
AjuI GAANNNNNNNTTGG 4 cut(s) 741, 773, 787, 819
AloI GAACNNNNNNTCC 2 cut(s) 1575, 1607
AluBI AGCT 6 cut(s) 89, 132, 1119, 1479, 1531, 1790
AluI AGCT 6 cut(s) 89, 132, 1119, 1479, 1531, 1790
Alw21I GWGCWC 1 cut(s) 1200
Alw26I GTCTC 1 cut(s) 621
Alw44I GTGCAC 1 cut(s) 1196
AlwI GGATC 3 cut(s) 1021, 1155, 1481
AoxI GGCC 1 cut(s) 399
ApaLI GTGCAC 1 cut(s) 1196
ApeKI GCWGC 1 cut(s) 1369
ApoI RAATTY 3 cut(s) 736, 966, 1112
ArsI GACNNNNNNTTYG 2 cut(s) 646, 678
Asp700I GAANNNNTTC 1 cut(s) 1480
AspLEI GCGC 5 cut(s) 339, 721, 960, 1417, 1419
AspS9I GGNCC 4 cut(s) 187, 286, 1031, 1329
AsuC2I CCSGG 2 cut(s) 41, 955
AsuHPI GGTGA 4 cut(s) 55, 484, 627, 1694
AvaII GGWCC 4 cut(s) 187, 286, 1031, 1329
BaeGI GKGCMC 1 cut(s) 1200
BaeI ACNNNNGTAYC 4 cut(s) 1313, 1346, 1487, 1520
BbsI GAAGAC 2 cut(s) 127, 267
Bbv12I GWGCWC 1 cut(s) 1200
BbvI GCAGC 1 cut(s) 1356
BccI CCATC 3 cut(s) 348, 391, 497
BciT130I CCWGG 1 cut(s) 1359
BciVI GTATCC 1 cut(s) 1066
BclI TGATCA 3 cut(s) 370, 775, 816
BcnI CCSGG 2 cut(s) 41, 955
BcoDI GTCTC 1 cut(s) 621
BfaI CTAG 2 cut(s) 317, 710
BfmI CTRYAG 1 cut(s) 1039
BfoI RGCGCY 1 cut(s) 340
BfuI GTATCC 1 cut(s) 1066
BisI GCNGC 2 cut(s) 1370, 1373
BlsI GCNGC 2 cut(s) 1371, 1374
Bme1390I CCNGG 3 cut(s) 41, 955, 1359
Bme18I GGWCC 4 cut(s) 187, 286, 1031, 1329
BmeRI GACNNNNNGTC 1 cut(s) 922
BmgT120I GGNCC 4 cut(s) 187, 286, 1031, 1329
BmiI GGNNCC 1 cut(s) 567
BmrFI CCNGG 3 cut(s) 41, 955, 1359
BmsI GCATC 3 cut(s) 87, 1071, 1402
BpiI GAAGAC 2 cut(s) 127, 267
BplI GAGNNNNNCTC 2 cut(s) 1134, 1166
BpmI CTGGAG 1 cut(s) 1428
Bpu10I CCTNAGC 1 cut(s) 1471
BpuEI CTTGAG 1 cut(s) 1259
BpuMI CCSGG 2 cut(s) 41, 955
BsaAI YACGTR 1 cut(s) 1499
BsaJI CCNNGG 2 cut(s) 282, 518
BsaXI ACNNNNNCTCC 4 cut(s) 11, 41, 871, 901
Bsc4I CCNNNNNNNGG 5 cut(s) 196, 295, 357, 1338, 1358
Bse118I RCCGGY 1 cut(s) 1646
Bse1I ACTGG 1 cut(s) 1705
Bse3DI GCAATG 3 cut(s) 512, 559, 1265
BseBI CCWGG 1 cut(s) 1359
BseDI CCNNGG 2 cut(s) 282, 518
BseGI GGATG 1 cut(s) 1554
BseLI CCNNNNNNNGG 5 cut(s) 196, 295, 357, 1338, 1358
BseMI GCAATG 3 cut(s) 512, 559, 1265
BseMII CTCAG 5 cut(s) 632, 915, 1165, 1485, 1644
BseNI ACTGG 1 cut(s) 1705
BsePI GCGCGC 1 cut(s) 1415
BseRI GAGGAG 4 cut(s) 639, 1541, 1562, 1737
BseSI GKGCMC 1 cut(s) 1200
BseXI GCAGC 1 cut(s) 1356
BsgI GTGCAG 2 cut(s) 1363, 1559
Bsh1236I CGCG 1 cut(s) 1417
Bsh1285I CGRYCG 1 cut(s) 258
BshFI GGCC 1 cut(s) 401
BsiEI CGRYCG 1 cut(s) 258
BsiHKAI GWGCWC 1 cut(s) 1200
BsiSI CCGG 3 cut(s) 41, 955, 1647
BslI CCNNNNNNNGG 5 cut(s) 196, 295, 357, 1338, 1358
BsmAI GTCTC 1 cut(s) 621
BsmI GAATGC 3 cut(s) 554, 591, 1050
BsnI GGCC 1 cut(s) 401
Bsp1286I GDGCHC 1 cut(s) 1200
Bsp1407I TGTACA 1 cut(s) 1503
Bsp143I GATC 8 cut(s) 255, 370, 505, 775, 816, 1013, 1147, 1486
BspACI CCGC 4 cut(s) 857, 1372, 1493, 1765
BspANI GGCC 1 cut(s) 401
BspCNI CTCAG 5 cut(s) 631, 914, 1164, 1484, 1643
BspFNI CGCG 1 cut(s) 1417
BspLI GGNNCC 1 cut(s) 567
BspPI GGATC 3 cut(s) 1021, 1155, 1481
BspQI GCTCTTC 1 cut(s) 135
BsrDI GCAATG 3 cut(s) 512, 559, 1265
BsrFI RCCGGY 1 cut(s) 1646
BsrGI TGTACA 1 cut(s) 1503
BsrI ACTGG 1 cut(s) 1705
BssAI RCCGGY 1 cut(s) 1646
BssECI CCNNGG 2 cut(s) 282, 518
BssHII GCGCGC 1 cut(s) 1415
BssMI GATC 8 cut(s) 255, 370, 505, 775, 816, 1013, 1147, 1486
BssT1I CCWWGG 1 cut(s) 282
Bst2UI CCWGG 1 cut(s) 1359
Bst4CI ACNGT 6 cut(s) 307, 397, 579, 875, 1040, 1059
Bst6I CTCTTC 2 cut(s) 135, 1164
BstAPI GCANNNNNTGC 1 cut(s) 206
BstAUI TGTACA 1 cut(s) 1503
BstBAI YACGTR 1 cut(s) 1499
BstC8I GCNNGC 3 cut(s) 202, 717, 1417
BstDEI CTNAG 6 cut(s) 85, 618, 901, 1151, 1471, 1630
BstENI CCTNNNNNAGG 2 cut(s) 293, 355
BstF5I GGATG 1 cut(s) 1554
BstFNI CGCG 1 cut(s) 1417
BstH2I RGCGCY 1 cut(s) 340
BstHHI GCGC 5 cut(s) 339, 721, 960, 1417, 1419
BstKTI GATC 8 cut(s) 258, 373, 508, 778, 819, 1016, 1150, 1489
BstMAI GTCTC 1 cut(s) 621
BstMBI GATC 8 cut(s) 255, 370, 505, 775, 816, 1013, 1147, 1486
BstMCI CGRYCG 1 cut(s) 258
BstMWI GCNNNNNNNGC 5 cut(s) 206, 725, 1412, 1476, 1675
BstNI CCWGG 1 cut(s) 1359
BstSCI CCNGG 3 cut(s) 39, 953, 1357
BstSFI CTRYAG 1 cut(s) 1039
BstSLI GKGCMC 1 cut(s) 1200
BstSNI TACGTA 1 cut(s) 1499
BstUI CGCG 1 cut(s) 1417
BstV1I GCAGC 1 cut(s) 1356
BstV2I GAAGAC 2 cut(s) 127, 267
BstX2I RGATCY 1 cut(s) 1147
BstYI RGATCY 1 cut(s) 1147
BsuI GTATCC 1 cut(s) 1066
BsuRI GGCC 1 cut(s) 401
BtsCI GGATG 1 cut(s) 1554
BtsIMutI CAGTG 4 cut(s) 498, 1064, 1072, 1712
Cac8I GCNNGC 3 cut(s) 202, 717, 1417
CfoI GCGC 5 cut(s) 339, 721, 960, 1417, 1419
Cfr10I RCCGGY 1 cut(s) 1646
Cfr13I GGNCC 4 cut(s) 187, 286, 1031, 1329
Csp6I GTAC 5 cut(s) 525, 1055, 1496, 1504, 1552
CspCI CAANNNNNGTGG 2 cut(s) 1590, 1625
CviAII CATG 7 cut(s) 206, 431, 779, 914, 1166, 1318, 1387
CviQI GTAC 5 cut(s) 525, 1055, 1496, 1504, 1552
DdeI CTNAG 6 cut(s) 85, 618, 901, 1151, 1471, 1630
DpnI GATC 8 cut(s) 257, 372, 507, 777, 818, 1015, 1149, 1488
DpnII GATC 8 cut(s) 255, 370, 505, 775, 816, 1013, 1147, 1486
DraI TTTAAA 1 cut(s) 177
DriI GACNNNNNGTC 1 cut(s) 922
EaeI YGGCCR 1 cut(s) 399
Eam1104I CTCTTC 2 cut(s) 135, 1164
Eam1105I GACNNNNNGTC 1 cut(s) 922
EarI CTCTTC 2 cut(s) 135, 1164
Eco105I TACGTA 1 cut(s) 1499
Eco130I CCWWGG 1 cut(s) 282
Eco47I GGWCC 4 cut(s) 187, 286, 1031, 1329
Eco57I CTGAAG 2 cut(s) 405, 828
EcoNI CCTNNNNNAGG 2 cut(s) 293, 355
EcoO109I RGGNCCY 1 cut(s) 286
EcoRII CCWGG 1 cut(s) 1357
EcoT14I CCWWGG 1 cut(s) 282
EcoT22I ATGCAT 3 cut(s) 380, 915, 1218
ErhI CCWWGG 1 cut(s) 282
FaeI CATG 7 cut(s) 209, 434, 782, 917, 1169, 1321, 1390
FalI AAGNNNNNCTT 4 cut(s) 741, 773, 1166, 1198
FatI CATG 7 cut(s) 205, 430, 778, 913, 1165, 1317, 1386
FauI CCCGC 1 cut(s) 864
FauNDI CATATG 2 cut(s) 560, 1231
FbaI TGATCA 3 cut(s) 370, 775, 816
FblI GTMKAC 1 cut(s) 1314
Fnu4HI GCNGC 2 cut(s) 1370, 1373
FokI GGATG 1 cut(s) 1541
Fsp4HI GCNGC 2 cut(s) 1370, 1373
FspBI CTAG 2 cut(s) 317, 710
GlaI GCGC 5 cut(s) 338, 720, 959, 1416, 1418
GluI GCNGC 2 cut(s) 1370, 1373
GsuI CTGGAG 1 cut(s) 1428
HaeII RGCGCY 1 cut(s) 340
HaeIII GGCC 1 cut(s) 401
HapII CCGG 3 cut(s) 41, 955, 1647
HhaI GCGC 5 cut(s) 339, 721, 960, 1417, 1419
Hin1II CATG 7 cut(s) 209, 434, 782, 917, 1169, 1321, 1390
Hin6I GCGC 5 cut(s) 337, 719, 958, 1415, 1417
HinP1I GCGC 5 cut(s) 337, 719, 958, 1415, 1417
HincII GTYRAC 1 cut(s) 1096
HindII GTYRAC 1 cut(s) 1096
HinfI GANTC 6 cut(s) 263, 680, 1237, 1613, 1628, 1744
HpaII CCGG 3 cut(s) 41, 955, 1647
HphI GGTGA 4 cut(s) 55, 484, 627, 1694
Hpy166II GTNNAC 9 cut(s) 635, 845, 1031, 1096, 1198, 1315, 1383, 1506, 1673
Hpy188III TCNNGA 5 cut(s) 182, 456, 785, 1473, 1632
Hpy8I GTNNAC 9 cut(s) 635, 845, 1031, 1096, 1198, 1315, 1383, 1506, 1673
HpyAV CCTTC 8 cut(s) 55, 211, 428, 1004, 1133, 1580, 1604, 1723
HpyCH4III ACNGT 6 cut(s) 307, 397, 579, 875, 1040, 1059
HpyCH4IV ACGT 3 cut(s) 365, 1194, 1498
HpyF10VI GCNNNNNNNGC 5 cut(s) 206, 725, 1412, 1476, 1675
HpyF3I CTNAG 6 cut(s) 85, 618, 901, 1151, 1471, 1630
HpySE526I ACGT 3 cut(s) 365, 1194, 1498
Hsp92II CATG 7 cut(s) 209, 434, 782, 917, 1169, 1321, 1390
HspAI GCGC 5 cut(s) 337, 719, 958, 1415, 1417
Ksp22I TGATCA 3 cut(s) 370, 775, 816
Kzo9I GATC 8 cut(s) 255, 370, 505, 775, 816, 1013, 1147, 1486
LguI GCTCTTC 1 cut(s) 135
LmnI GCTCC 4 cut(s) 32, 94, 334, 1528
Lsp1109I GCAGC 1 cut(s) 1356
LweI GCATC 3 cut(s) 87, 1071, 1402
MaeI CTAG 2 cut(s) 317, 710
MaeII ACGT 3 cut(s) 365, 1194, 1498
MaeIII GTNAC 7 cut(s) 35, 424, 466, 479, 875, 924, 1298
MalI GATC 8 cut(s) 257, 372, 507, 777, 818, 1015, 1149, 1488
MboI GATC 8 cut(s) 255, 370, 505, 775, 816, 1013, 1147, 1486
MfeI CAATTG 3 cut(s) 151, 1431, 1734
MflI RGATCY 1 cut(s) 1147
MhlI GDGCHC 1 cut(s) 1200
MlyI GAGTC 4 cut(s) 257, 1622, 1622, 1738
MmeI TCCRAC 1 cut(s) 1116
Mph1103I ATGCAT 3 cut(s) 380, 915, 1218
MroXI GAANNNNTTC 1 cut(s) 1480
MseI TTAA 5 cut(s) 176, 224, 1085, 1191, 1226
MspA1I CMGCKG 1 cut(s) 132
MspI CCGG 3 cut(s) 41, 955, 1647
MspR9I CCNGG 3 cut(s) 41, 955, 1359
MunI CAATTG 3 cut(s) 151, 1431, 1734
Mva1269I GAATGC 3 cut(s) 554, 591, 1050
MvaI CCWGG 1 cut(s) 1359
MvnI CGCG 1 cut(s) 1417
MwoI GCNNNNNNNGC 5 cut(s) 206, 725, 1412, 1476, 1675
NciI CCSGG 2 cut(s) 41, 955
NdeI CATATG 2 cut(s) 560, 1231
NdeII GATC 8 cut(s) 255, 370, 505, 775, 816, 1013, 1147, 1486
NlaIII CATG 7 cut(s) 209, 434, 782, 917, 1169, 1321, 1390
NlaIV GGNNCC 1 cut(s) 567
NmuCI GTSAC 4 cut(s) 35, 424, 924, 1298
NsiI ATGCAT 3 cut(s) 380, 915, 1218
PauI GCGCGC 1 cut(s) 1415
PciSI GCTCTTC 1 cut(s) 135
PcsI WCGNNNNNNNCGW 1 cut(s) 968
PctI GAATGC 3 cut(s) 554, 591, 1050
PdmI GAANNNNTTC 1 cut(s) 1480
PfeI GAWTC 2 cut(s) 680, 1237
PflMI CCANNNNNTGG 1 cut(s) 196
PfoI TCCNGGA 1 cut(s) 1357
PkrI GCNGC 2 cut(s) 1371, 1374
Ple19I CGATCG 1 cut(s) 258
PleI GAGTC 4 cut(s) 257, 1621, 1622, 1738
PpsI GAGTC 4 cut(s) 257, 1621, 1622, 1738
Ppu21I YACGTR 1 cut(s) 1499
PpuMI RGGWCCY 1 cut(s) 286
PsiI TTATAA 1 cut(s) 444
Psp1406I AACGTT 1 cut(s) 365
Psp5II RGGWCCY 1 cut(s) 286
Psp6I CCWGG 1 cut(s) 1357
PspGI CCWGG 1 cut(s) 1357
PspN4I GGNNCC 1 cut(s) 567
PspPI GGNCC 4 cut(s) 187, 286, 1031, 1329
PspPPI RGGWCCY 1 cut(s) 286
PsuI RGATCY 1 cut(s) 1147
PteI GCGCGC 1 cut(s) 1415
PvuI CGATCG 1 cut(s) 258
PvuII CAGCTG 1 cut(s) 132
RsaI GTAC 5 cut(s) 526, 1056, 1497, 1505, 1553
RsaNI GTAC 5 cut(s) 525, 1055, 1496, 1504, 1552
SapI GCTCTTC 1 cut(s) 135
SaqAI TTAA 5 cut(s) 176, 224, 1085, 1191, 1226
SatI GCNGC 2 cut(s) 1370, 1373
Sau3AI GATC 8 cut(s) 255, 370, 505, 775, 816, 1013, 1147, 1486
Sau96I GGNCC 4 cut(s) 187, 286, 1031, 1329
SchI GAGTC 4 cut(s) 257, 1622, 1622, 1738
ScrFI CCNGG 3 cut(s) 41, 955, 1359
SduI GDGCHC 1 cut(s) 1200
SfaNI GCATC 3 cut(s) 87, 1071, 1402
SfcI CTRYAG 1 cut(s) 1039
SinI GGWCC 4 cut(s) 187, 286, 1031, 1329
SmlI CTYRAG 1 cut(s) 1274
SmoI CTYRAG 1 cut(s) 1274
SnaBI TACGTA 1 cut(s) 1499
SsiI CCGC 4 cut(s) 857, 1372, 1493, 1765
SspMI CTAG 2 cut(s) 317, 710
StyD4I CCNGG 3 cut(s) 39, 953, 1357
StyI CCWWGG 1 cut(s) 282
TaaI ACNGT 6 cut(s) 307, 397, 579, 875, 1040, 1059
TaiI ACGT 3 cut(s) 368, 1197, 1501
TaqI TCGA 3 cut(s) 138, 258, 652
TatI WGTACW 3 cut(s) 524, 1503, 1551
TauI GCSGC 1 cut(s) 1375
TfiI GAWTC 2 cut(s) 680, 1237
Tru1I TTAA 5 cut(s) 176, 224, 1085, 1191, 1226
Tru9I TTAA 5 cut(s) 176, 224, 1085, 1191, 1226
TscAI CASTG 4 cut(s) 505, 1064, 1072, 1712
TseFI GTSAC 4 cut(s) 35, 424, 924, 1298
TseI GCWGC 1 cut(s) 1369
Tsp45I GTSAC 4 cut(s) 35, 424, 924, 1298
TspDTI ATGAA 7 cut(s) 447, 584, 672, 1175, 1182, 1254, 1403
TspGWI ACGGA 2 cut(s) 960, 1091
TspRI CASTG 4 cut(s) 505, 1064, 1072, 1712
Van91I CCANNNNNTGG 1 cut(s) 196
VneI GTGCAC 1 cut(s) 1196
VpaK11BI GGWCC 4 cut(s) 187, 286, 1031, 1329
XagI CCTNNNNNAGG 2 cut(s) 293, 355
XapI RAATTY 3 cut(s) 736, 966, 1112
XmiI GTMKAC 1 cut(s) 1314
XmnI GAANNNNTTC 1 cut(s) 1480
XspI CTAG 2 cut(s) 317, 710
Zsp2I ATGCAT 3 cut(s) 380, 915, 1218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.