Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008117

Physical Location & Seq

Genomic Coordinates Reverse (-)

57879058 .. 57883892

Gene Structure 4835 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00207910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGAAGCCATTCAAGTTCATGGAGGGAGTTTCAAAACACAAACGCTCCAATAGTGACCCGGTGAAAAGAAAGGTTGGGAAGGATAAATTGAATAGCATCATCTTAGCTCCTTACAGACTTGGAAATAGAGAAATGGGAAGACCAAACAGCTGTGTCGAAGAGCATCCCAATTGTTCTGATGTTCAAAGTTCTTTAAATCAGGAGATTTTACAGCTTCAAAAACAATTGCAGGACCAACTTGTGGCACGTCATGCTTTAGAGAAGGCTTTAGGTTATCAGCACCTATCATACGATGCTACGATCGAAGACTCACTCCCAAAGTCTGCCAAGGACCTAATAAAGGACATTACAGTTTTAGAACTAGAAGTTGTCTTTTTGGAGCGCTATCTTCTATCCTTATACAGGAAAACGTTTGATCAACGCATACCATCTGAATTGACTGTGGCCGAAAGACAGAGTTCCTCTTCAGTCACACATAAAGGAAGTTATAAAGAAGTTTCTGGACAAGATGTTACACCAGAAAGTAACAAAACAATCACCTACGCTGATGATCTTACATTGCCTCGGAGTACATCTGGCAAACCATTCAAGGAATGCAACGGCATATGGGAACCAGAAAAACTGTTAGATTCGAGCATTCATCGTTGCTATTCCTCCCTGTCTCAGCGTTCAACTTGTTCACTGAAAACTTCTCCTCAAACAAAATCTCAAACTAAAAATGTAGATTCATACCACTCCTTACCTTTCTCAATGCTAGAGCAAGCGCAGTTTGCAACTTCAAATTTATATGCAGAAGAACATCTTGGAAGTTATTTCTCTGATCATGTTCCAGAAACACCAAACTGCCTTTCTGAAGAAATGATCAAGTGCATTTCAGCAATATATTGTGAACTTGCTGACCCGCCTATTATCATTAACGGTTACACTTGCTCTCCAATCACATTCTCAGCACCAATGCATGACTTTTCGTCACAGGCTGAAAGTGAAAAGTGGAGTTCCCGGCGTACGAAAATTCCGTTTTTCAATTCACAATCTGAAAAGCCTATCCACTTTGAAGGATCAGAAGAATTGAGTGGACCTTACTGTAGAATGCTTAAGGTACAGTGCATCAGTGAGGATATGGAGAAGTTAAGAGATGTTGAACACACACTAAAGAAATTTAGCTCACTTGTTTATCAGTTGGAAGGAGTGGATCTCAGAAAGATGAAACATGAAGAGAAGTTGGCCTTTTGGATTAACGTGCACAATGCACTCGTTATGCATACATTTTTAACATATGGGATTCCACAAAATTATTCAAAAAGAGTTTCATTGCCACTCAAGTCTGCATATAATGTGGGAGGTCACACCATAAGTGTAGACATGATACAGAGGTCCATTTTGGGGTGCAGATTGCCTCGTCCTGGACAATGGCTGCGGTTGTTGTTTACCATGAAAACAAAGTTCAAGGCTGGAGATGCACGCAAATCGTATGCAATTGAGCAACCCGAACCTCTCTTGCATTTTGCACTCTGCTCAGGAAGCTATTCCGATCCTGCGGTACGTATGTACACATCAAAGAGAGTGTTTGAGGAGCTGGAAACTGCAAAAGAGGAGTACATCCAATCAACCTTCCTTCTGCACAAGGAACAGAAAATCCTTCTTCCAAAGATTGTGGAGTCATTTGCAAAGGACTCAGGATTATGCTCTGCCGGTTTGGTAGAGATGATTGAGCGTTTACTGCCTAACTCTGAAAGAAAAAGTAATCAACAGTGCCAACAGAGAAGAATATGGAAGGCAATTGATTGGATTCCTCACAACTTTACTTTCCGCTATCTTATCCCAAAAGAAGTAGCTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF547 FBA_1 Lzipper-MIP1

Protein Analysis

613

Amino Acids

70.23

Weight (kDa)

8.43

Isoelectric Point (pI)

52.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lzipper-MIP1	PF14389	60 - 140	2e-22	Leucine-zipper of ternary complex factor MIP1
DUF547	PF04784	399 - 534	5.8e-41	Protein of unknown function, DUF547

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008117)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g07820 FvH4_2g07820 FvH4_2g07820 FvH4_2g07820 FvH4_2g07820
malus_domestica	MD10G1083700.v1.1
prunus_persica	Prupe.8G106700_v2.0.a1 Prupe.8G106700_v2.0.a1 Prupe.8G106700_v2.0.a1 Prupe.8G106700_v2.0.a1 Prupe.8G106700_v2.0.a1 Prupe.8G106700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0262231
rosa_laevigata	RLG00000014444
rosa_multiflora	Rmu_sc0002510.1_g000026
rosa_roxburghii	Rroxscaffold_7G00207910
rosa_rugosa	Rorug05G0595400 Rorug05G0595500 Rorug05G0595600
rosa_samantha	Rh6AG115700 Rh6BG110000 Rh6CG107700 Rh6DG098000
rosa_wichuraiana	Rw6G010070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	489
AccB7I	CCANNNNNTGG	1 cut(s)	241
AccI	GTMKAC	1 cut(s)	1359
AciI	CCGC	4 cut(s)	902, 1417, 1538, 1810
AclI	AACGTT	1 cut(s)	410
AclWI	GGATC	3 cut(s)	1066, 1200, 1526
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	3 cut(s)	781, 1011, 1157
AcuI	CTGAAG	2 cut(s)	450, 873
AfaI	GTAC	6 cut(s)	571, 1006, 1101, 1542, 1550, 1598
AfeI	AGCGCT	1 cut(s)	383
AfiI	CCNNNNNNNGG	5 cut(s)	241, 340, 402, 1383, 1403
AflII	CTTAAG	1 cut(s)	1094
AhdI	GACNNNNNGTC	1 cut(s)	967
AjiI	CACGTC	1 cut(s)	248
AjnI	CCWGG	1 cut(s)	1402
AjuI	GAANNNNNNNTTGG	4 cut(s)	786, 818, 832, 864
AloI	GAACNNNNNNTCC	2 cut(s)	1620, 1652
AluBI	AGCT	7 cut(s)	107, 150, 214, 1164, 1524, 1576, 1835
AluI	AGCT	7 cut(s)	107, 150, 214, 1164, 1524, 1576, 1835
Alw21I	GWGCWC	1 cut(s)	1245
Alw26I	GTCTC	1 cut(s)	666
Alw44I	GTGCAC	1 cut(s)	1241
AlwI	GGATC	3 cut(s)	1066, 1200, 1526
Aor51HI	AGCGCT	1 cut(s)	383
AoxI	GGCC	2 cut(s)	444, 1224
ApaLI	GTGCAC	1 cut(s)	1241
ApeKI	GCWGC	1 cut(s)	1414
ApoI	RAATTY	3 cut(s)	781, 1011, 1157
Asp700I	GAANNNNTTC	2 cut(s)	8, 1525
AspLEI	GCGC	2 cut(s)	384, 766
AspS9I	GGNCC	4 cut(s)	232, 331, 1076, 1374
AsuC2I	CCSGG	2 cut(s)	59, 1000
AsuHPI	GGTGA	2 cut(s)	73, 529
AvaII	GGWCC	4 cut(s)	232, 331, 1076, 1374
BaeGI	GKGCMC	1 cut(s)	1245
BaeI	ACNNNNGTAYC	4 cut(s)	1358, 1391, 1532, 1565
BbsI	GAAGAC	2 cut(s)	145, 312
Bbv12I	GWGCWC	1 cut(s)	1245
BbvI	GCAGC	1 cut(s)	1401
BccI	CCATC	1 cut(s)	436
BceAI	ACGGC	1 cut(s)	616
BcgI	CGANNNNNNTGC	2 cut(s)	1449, 1483
BciT130I	CCWGG	1 cut(s)	1404
BclI	TGATCA	3 cut(s)	415, 820, 861
BcnI	CCSGG	2 cut(s)	59, 1000
BcoDI	GTCTC	1 cut(s)	666
BfaI	CTAG	2 cut(s)	362, 755
BfmI	CTRYAG	1 cut(s)	1084
BfoI	RGCGCY	1 cut(s)	385
BfrI	CTTAAG	1 cut(s)	1094
BisI	GCNGC	1 cut(s)	1415
BlsI	GCNGC	1 cut(s)	1416
Bme1390I	CCNGG	3 cut(s)	59, 1000, 1404
Bme18I	GGWCC	4 cut(s)	232, 331, 1076, 1374
BmeRI	GACNNNNNGTC	1 cut(s)	967
BmgBI	CACGTC	1 cut(s)	248
BmgT120I	GGNCC	4 cut(s)	232, 331, 1076, 1374
BmiI	GGNNCC	1 cut(s)	612
BmrFI	CCNGG	3 cut(s)	59, 1000, 1404
BmsI	GCATC	5 cut(s)	105, 172, 283, 1116, 1447
BpiI	GAAGAC	2 cut(s)	145, 312
BplI	GAGNNNNNCTC	2 cut(s)	1179, 1211
BpmI	CTGGAG	1 cut(s)	1473
Bpu10I	CCTNAGC	1 cut(s)	1516
BpuEI	CTTGAG	1 cut(s)	1304
BpuMI	CCSGG	2 cut(s)	59, 1000
BsaAI	YACGTR	1 cut(s)	1544
BsaJI	CCNNGG	2 cut(s)	327, 563
BsaXI	ACNNNNNCTCC	4 cut(s)	29, 59, 916, 946
Bsc4I	CCNNNNNNNGG	5 cut(s)	241, 340, 402, 1383, 1403
Bse118I	RCCGGY	1 cut(s)	1691
Bse3DI	GCAATG	2 cut(s)	557, 1310
BseBI	CCWGG	1 cut(s)	1404
BseDI	CCNNGG	2 cut(s)	327, 563
BseGI	GGATG	2 cut(s)	163, 1599
BseLI	CCNNNNNNNGG	5 cut(s)	241, 340, 402, 1383, 1403
BseMI	GCAATG	2 cut(s)	557, 1310
BseMII	CTCAG	5 cut(s)	677, 960, 1210, 1530, 1689
BseRI	GAGGAG	3 cut(s)	684, 1586, 1607
BseSI	GKGCMC	1 cut(s)	1245
BseXI	GCAGC	1 cut(s)	1401
BsgI	GTGCAG	2 cut(s)	1408, 1604
Bsh1285I	CGRYCG	1 cut(s)	303
BshFI	GGCC	2 cut(s)	446, 1226
BsiEI	CGRYCG	1 cut(s)	303
BsiHKAI	GWGCWC	1 cut(s)	1245
BsiSI	CCGG	3 cut(s)	59, 1000, 1692
BsiWI	CGTACG	1 cut(s)	1004
BslI	CCNNNNNNNGG	5 cut(s)	241, 340, 402, 1383, 1403
BsmAI	GTCTC	1 cut(s)	666
BsmI	GAATGC	3 cut(s)	599, 636, 1095
BsnI	GGCC	2 cut(s)	446, 1226
Bsp1286I	GDGCHC	1 cut(s)	1245
Bsp1407I	TGTACA	1 cut(s)	1548
Bsp143I	GATC	8 cut(s)	300, 415, 550, 820, 861, 1058, 1192, 1531
BspACI	CCGC	4 cut(s)	902, 1417, 1538, 1810
BspANI	GGCC	2 cut(s)	446, 1226
BspCNI	CTCAG	5 cut(s)	676, 959, 1209, 1529, 1688
BspLI	GGNNCC	1 cut(s)	612
BspPI	GGATC	3 cut(s)	1066, 1200, 1526
BspQI	GCTCTTC	1 cut(s)	153
BspTI	CTTAAG	1 cut(s)	1094
BsrDI	GCAATG	2 cut(s)	557, 1310
BsrFI	RCCGGY	1 cut(s)	1691
BsrGI	TGTACA	1 cut(s)	1548
BssAI	RCCGGY	1 cut(s)	1691
BssECI	CCNNGG	2 cut(s)	327, 563
BssMI	GATC	8 cut(s)	300, 415, 550, 820, 861, 1058, 1192, 1531
BssT1I	CCWWGG	1 cut(s)	327
Bst2UI	CCWGG	1 cut(s)	1404
Bst4CI	ACNGT	7 cut(s)	352, 442, 624, 920, 1085, 1104, 1752
Bst6I	CTCTTC	3 cut(s)	153, 469, 1209
BstAFI	CTTAAG	1 cut(s)	1094
BstAPI	GCANNNNNTGC	1 cut(s)	251
BstAUI	TGTACA	1 cut(s)	1548
BstBAI	YACGTR	1 cut(s)	1544
BstC8I	GCNNGC	2 cut(s)	762, 1462
BstDEI	CTNAG	6 cut(s)	103, 663, 946, 1196, 1516, 1675
BstENI	CCTNNNNNAGG	2 cut(s)	338, 400
BstF5I	GGATG	2 cut(s)	163, 1599
BstH2I	RGCGCY	1 cut(s)	385
BstHHI	GCGC	2 cut(s)	384, 766
BstKTI	GATC	8 cut(s)	303, 418, 553, 823, 864, 1061, 1195, 1534
BstMAI	GTCTC	1 cut(s)	666
BstMBI	GATC	8 cut(s)	300, 415, 550, 820, 861, 1058, 1192, 1531
BstMCI	CGRYCG	1 cut(s)	303
BstMWI	GCNNNNNNNGC	5 cut(s)	251, 770, 1457, 1521, 1720
BstNI	CCWGG	1 cut(s)	1404
BstSCI	CCNGG	3 cut(s)	57, 998, 1402
BstSFI	CTRYAG	1 cut(s)	1084
BstSLI	GKGCMC	1 cut(s)	1245
BstSNI	TACGTA	1 cut(s)	1544
BstV1I	GCAGC	1 cut(s)	1401
BstV2I	GAAGAC	2 cut(s)	145, 312
BstX2I	RGATCY	1 cut(s)	1192
BstYI	RGATCY	1 cut(s)	1192
BsuRI	GGCC	2 cut(s)	446, 1226
BtrI	CACGTC	1 cut(s)	248
BtsCI	GGATG	2 cut(s)	163, 1599
BtsIMutI	CAGTG	4 cut(s)	680, 1109, 1117, 1757
Cac8I	GCNNGC	2 cut(s)	762, 1462
CfoI	GCGC	2 cut(s)	384, 766
Cfr10I	RCCGGY	1 cut(s)	1691
Cfr13I	GGNCC	4 cut(s)	232, 331, 1076, 1374
Csp6I	GTAC	6 cut(s)	570, 1005, 1100, 1541, 1549, 1597
CspCI	CAANNNNNGTGG	2 cut(s)	1635, 1670
CviAII	CATG	7 cut(s)	19, 251, 824, 959, 1211, 1363, 1432
CviQI	GTAC	6 cut(s)	570, 1005, 1100, 1541, 1549, 1597
DdeI	CTNAG	6 cut(s)	103, 663, 946, 1196, 1516, 1675
DpnI	GATC	8 cut(s)	302, 417, 552, 822, 863, 1060, 1194, 1533
DpnII	GATC	8 cut(s)	300, 415, 550, 820, 861, 1058, 1192, 1531
DraI	TTTAAA	1 cut(s)	195
DriI	GACNNNNNGTC	1 cut(s)	967
EaeI	YGGCCR	1 cut(s)	444
Eam1104I	CTCTTC	3 cut(s)	153, 469, 1209
Eam1105I	GACNNNNNGTC	1 cut(s)	967
EarI	CTCTTC	3 cut(s)	153, 469, 1209
Eco105I	TACGTA	1 cut(s)	1544
Eco130I	CCWWGG	1 cut(s)	327
Eco47I	GGWCC	4 cut(s)	232, 331, 1076, 1374
Eco47III	AGCGCT	1 cut(s)	383
Eco57I	CTGAAG	2 cut(s)	450, 873
EcoNI	CCTNNNNNAGG	2 cut(s)	338, 400
EcoO109I	RGGNCCY	1 cut(s)	331
EcoRII	CCWGG	1 cut(s)	1402
EcoT14I	CCWWGG	1 cut(s)	327
EcoT22I	ATGCAT	2 cut(s)	960, 1263
ErhI	CCWWGG	1 cut(s)	327
FaeI	CATG	7 cut(s)	22, 254, 827, 962, 1214, 1366, 1435
FalI	AAGNNNNNCTT	4 cut(s)	786, 818, 1211, 1243
FatI	CATG	7 cut(s)	18, 250, 823, 958, 1210, 1362, 1431
FauI	CCCGC	1 cut(s)	909
FauNDI	CATATG	2 cut(s)	605, 1276
FbaI	TGATCA	3 cut(s)	415, 820, 861
FblI	GTMKAC	1 cut(s)	1359
Fnu4HI	GCNGC	1 cut(s)	1415
FokI	GGATG	2 cut(s)	150, 1586
Fsp4HI	GCNGC	1 cut(s)	1415
FspBI	CTAG	2 cut(s)	362, 755
GlaI	GCGC	2 cut(s)	383, 765
GluI	GCNGC	1 cut(s)	1415
GsuI	CTGGAG	1 cut(s)	1473
HaeII	RGCGCY	1 cut(s)	385
HaeIII	GGCC	2 cut(s)	446, 1226
HapII	CCGG	3 cut(s)	59, 1000, 1692
HhaI	GCGC	2 cut(s)	384, 766
Hin1II	CATG	7 cut(s)	22, 254, 827, 962, 1214, 1366, 1435
Hin6I	GCGC	2 cut(s)	382, 764
HinP1I	GCGC	2 cut(s)	382, 764
HinfI	GANTC	7 cut(s)	308, 629, 725, 1282, 1658, 1673, 1789
HpaII	CCGG	3 cut(s)	59, 1000, 1692
HphI	GGTGA	2 cut(s)	73, 529
Hpy166II	GTNNAC	8 cut(s)	680, 890, 1076, 1243, 1360, 1428, 1551, 1718
Hpy188III	TCNNGA	5 cut(s)	200, 501, 830, 1518, 1677
Hpy8I	GTNNAC	8 cut(s)	680, 890, 1076, 1243, 1360, 1428, 1551, 1718
HpyAV	CCTTC	8 cut(s)	73, 256, 1049, 1178, 1621, 1625, 1649, 1768
HpyCH4III	ACNGT	7 cut(s)	352, 442, 624, 920, 1085, 1104, 1752
HpyCH4IV	ACGT	4 cut(s)	247, 410, 1239, 1543
HpyF10VI	GCNNNNNNNGC	5 cut(s)	251, 770, 1457, 1521, 1720
HpyF3I	CTNAG	6 cut(s)	103, 663, 946, 1196, 1516, 1675
HpySE526I	ACGT	4 cut(s)	247, 410, 1239, 1543
Hsp92II	CATG	7 cut(s)	22, 254, 827, 962, 1214, 1366, 1435
HspAI	GCGC	2 cut(s)	382, 764
Ksp22I	TGATCA	3 cut(s)	415, 820, 861
Kzo9I	GATC	8 cut(s)	300, 415, 550, 820, 861, 1058, 1192, 1531
LguI	GCTCTTC	1 cut(s)	153
LmnI	GCTCC	4 cut(s)	50, 112, 379, 1573
Lsp1109I	GCAGC	1 cut(s)	1401
LweI	GCATC	5 cut(s)	105, 172, 283, 1116, 1447
MaeI	CTAG	2 cut(s)	362, 755
MaeII	ACGT	4 cut(s)	247, 410, 1239, 1543
MaeIII	GTNAC	7 cut(s)	53, 469, 511, 524, 920, 969, 1343
MalI	GATC	8 cut(s)	302, 417, 552, 822, 863, 1060, 1194, 1533
MboI	GATC	8 cut(s)	300, 415, 550, 820, 861, 1058, 1192, 1531
MfeI	CAATTG	4 cut(s)	169, 224, 1476, 1779
MflI	RGATCY	1 cut(s)	1192
MhlI	GDGCHC	1 cut(s)	1245
MlyI	GAGTC	3 cut(s)	302, 1667, 1667
MmeI	TCCRAC	1 cut(s)	1161
Mph1103I	ATGCAT	2 cut(s)	960, 1263
MroXI	GAANNNNTTC	2 cut(s)	8, 1525
MseI	TTAA	6 cut(s)	194, 915, 1095, 1130, 1236, 1271
MspA1I	CMGCKG	1 cut(s)	150
MspCI	CTTAAG	1 cut(s)	1094
MspI	CCGG	3 cut(s)	59, 1000, 1692
MspR9I	CCNGG	3 cut(s)	59, 1000, 1404
MunI	CAATTG	4 cut(s)	169, 224, 1476, 1779
Mva1269I	GAATGC	3 cut(s)	599, 636, 1095
MvaI	CCWGG	1 cut(s)	1404
MwoI	GCNNNNNNNGC	5 cut(s)	251, 770, 1457, 1521, 1720
NciI	CCSGG	2 cut(s)	59, 1000
NdeI	CATATG	2 cut(s)	605, 1276
NdeII	GATC	8 cut(s)	300, 415, 550, 820, 861, 1058, 1192, 1531
NlaIII	CATG	7 cut(s)	22, 254, 827, 962, 1214, 1366, 1435
NlaIV	GGNNCC	1 cut(s)	612
NmuCI	GTSAC	4 cut(s)	53, 469, 969, 1343
NsiI	ATGCAT	2 cut(s)	960, 1263
PciSI	GCTCTTC	1 cut(s)	153
PcsI	WCGNNNNNNNCGW	1 cut(s)	1013
PctI	GAATGC	3 cut(s)	599, 636, 1095
PdmI	GAANNNNTTC	2 cut(s)	8, 1525
PfeI	GAWTC	4 cut(s)	629, 725, 1282, 1789
Pfl23II	CGTACG	1 cut(s)	1004
PflMI	CCANNNNNTGG	1 cut(s)	241
PfoI	TCCNGGA	1 cut(s)	1402
PkrI	GCNGC	1 cut(s)	1416
Ple19I	CGATCG	1 cut(s)	303
PleI	GAGTC	3 cut(s)	302, 1666, 1667
PpsI	GAGTC	3 cut(s)	302, 1666, 1667
Ppu21I	YACGTR	1 cut(s)	1544
PpuMI	RGGWCCY	1 cut(s)	331
PsiI	TTATAA	1 cut(s)	489
Psp1406I	AACGTT	1 cut(s)	410
Psp5II	RGGWCCY	1 cut(s)	331
Psp6I	CCWGG	1 cut(s)	1402
PspGI	CCWGG	1 cut(s)	1402
PspLI	CGTACG	1 cut(s)	1004
PspN4I	GGNNCC	1 cut(s)	612
PspPI	GGNCC	4 cut(s)	232, 331, 1076, 1374
PspPPI	RGGWCCY	1 cut(s)	331
PsuI	RGATCY	1 cut(s)	1192
PvuI	CGATCG	1 cut(s)	303
PvuII	CAGCTG	1 cut(s)	150
RsaI	GTAC	6 cut(s)	571, 1006, 1101, 1542, 1550, 1598
RsaNI	GTAC	6 cut(s)	570, 1005, 1100, 1541, 1549, 1597
SapI	GCTCTTC	1 cut(s)	153
SaqAI	TTAA	6 cut(s)	194, 915, 1095, 1130, 1236, 1271
SatI	GCNGC	1 cut(s)	1415
Sau3AI	GATC	8 cut(s)	300, 415, 550, 820, 861, 1058, 1192, 1531
Sau96I	GGNCC	4 cut(s)	232, 331, 1076, 1374
SchI	GAGTC	3 cut(s)	302, 1667, 1667
ScrFI	CCNGG	3 cut(s)	59, 1000, 1404
SduI	GDGCHC	1 cut(s)	1245
SfaNI	GCATC	5 cut(s)	105, 172, 283, 1116, 1447
SfcI	CTRYAG	1 cut(s)	1084
SinI	GGWCC	4 cut(s)	232, 331, 1076, 1374
SmlI	CTYRAG	2 cut(s)	1094, 1319
SmoI	CTYRAG	2 cut(s)	1094, 1319
SnaBI	TACGTA	1 cut(s)	1544
SsiI	CCGC	4 cut(s)	902, 1417, 1538, 1810
SspMI	CTAG	2 cut(s)	362, 755
StyD4I	CCNGG	3 cut(s)	57, 998, 1402
StyI	CCWWGG	1 cut(s)	327
TaaI	ACNGT	7 cut(s)	352, 442, 624, 920, 1085, 1104, 1752
TaiI	ACGT	4 cut(s)	250, 413, 1242, 1546
TaqI	TCGA	3 cut(s)	156, 303, 632
TatI	WGTACW	3 cut(s)	569, 1548, 1596
TfiI	GAWTC	4 cut(s)	629, 725, 1282, 1789
Tru1I	TTAA	6 cut(s)	194, 915, 1095, 1130, 1236, 1271
Tru9I	TTAA	6 cut(s)	194, 915, 1095, 1130, 1236, 1271
TscAI	CASTG	4 cut(s)	687, 1109, 1117, 1757
TseFI	GTSAC	4 cut(s)	53, 469, 969, 1343
TseI	GCWGC	1 cut(s)	1414
Tsp45I	GTSAC	4 cut(s)	53, 469, 969, 1343
TspDTI	ATGAA	8 cut(s)	7, 17, 629, 717, 1220, 1227, 1299, 1448
TspGWI	ACGGA	1 cut(s)	1005
TspRI	CASTG	4 cut(s)	687, 1109, 1117, 1757
Van91I	CCANNNNNTGG	1 cut(s)	241
Vha464I	CTTAAG	1 cut(s)	1094
VneI	GTGCAC	1 cut(s)	1241
VpaK11BI	GGWCC	4 cut(s)	232, 331, 1076, 1374
XagI	CCTNNNNNAGG	2 cut(s)	338, 400
XapI	RAATTY	3 cut(s)	781, 1011, 1157
XmiI	GTMKAC	1 cut(s)	1359
XmnI	GAANNNNTTC	2 cut(s)	8, 1525
XspI	CTAG	2 cut(s)	362, 755
Zsp2I	ATGCAT	2 cut(s)	960, 1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.