Rmu_sc0002764.1_g000041

Sugar (and other) transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002764.1
OG0012873
Physical Location & Seq
Reverse (-)
160698 .. 171713
11016 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2970 bp
atgtcgagtcgacgctcattcaacatcaaattggggccggtcaacgcccaacatagctggtcaacgcccggcggggttggtcaacgcccaactcacaaaggtcaacgccgaacaaggcttggtcaacttttggtcaacgctgacatggttgggttggcttgccttcaaaggaactttccttgcaatcgtggccctggaatctattataattttgggattaattgtggaggacctgagattacgtcttcctccgatggaattgtgtatgagaaggaaaatgagccccttggaccagcttcatattttgtgactggcacaagcagatggggagttagcaatgtcggatctttcactggcagtaccaatcctcagtatacaagtttctccttatctcaattcacaaatacttttgattctgtgctattccagactgcaaggctctctgcttcatcaattagatactttggcttggggcttgagaatggtaactacaccgtgaacctcaagtttgcagaacatgtcattctggctgctactaccgggaaatttcttgggagacgtctttttgatatttatatccagggcattctggtatcaaaggattttgatatactaaaggaggcaggtatgtcatctttccgagctgttcagaagccatacacggctcatgtttcggagaactaccttgaaatccatctcttttgggctggaaaggggacttgctgcgtacctgcgcggggtacatatggacctgctattgcagccatcagtgctacaccggatttcatacctactgtcagtaacaaccctccaactagtaagaagaatcgaactgggctgattgttgggattgttgtgggtggtggagtacttttggttctgttgtttgtggctttttatcttgttcaaagaagaaaaaggtctgaccctgatgacgacgcagagctgtacgggatagatgttggaccacttaccttcagttatcctgaactaaagacagctacaaacgactttgatgaagctcataagcttggagagggcggatttggacctgtctatagaggaacacttagtgatggaagagtaattgctgtgaagcaattgtctgcagcatcccaccaaggaaagaaccagtttgtaactgagattgccactatatctgctgtgcaacacaataacctggtaaagttgtacggattctgcactgagggagttaaaaggctccttgtctatgagtatctggagaacaacagtcttgatcaagcattatttggagagagacgtttaaatcttgattggtcaacacgttttaatatatgcttgggcatagctagaggtttaacttatcttcacgaagaatcaaggagtcctctgttttcagtgcaaacagagatagccatgaaaatgaaaccagagactgtgacactggtgctggtcaacctagccagtattatgcagcgggctgatgagtcccttttgccaggagtctacaaagaagtgggagcctctcttcacacagacccaactgggttgggctctctgactctgttcagatccattgtccaatcctcctgctacccacttgctgcttatcttgctatgcgtcacaaccgagccaacgtcattgctcttggtgcttttctttgggctgccgccacttttctcgttggcttctcctctactttccttcaggttgctatttcaagaggtttaaatggtgttggacttgccatagtcattcctgccattcagtcacttgttgctgactcaacagatgataacaaccgtggtacagcatttggatggctacaactaacaggaaatctaggctccataataggtggtcttttttctgtactaatagcctccacttcagtaatgggtatagatggttggagaattgcattccatctggttgggctcattagtgtcatagtcggtatattggttcgtctctttgctaatgatccgcactatgtacagaacaatggtaaagctaaagatgaaatgccacatactttttcagaagaagtgaaggacctgattaaagaatccaagttggttatcaaaatcccaacttttcaaatactcattgctcagggtgtctttggatcattcccctggtcaggtttgtcatttgctcctttgtggttggagcttattggcttctcccacaaagaaacggcagttctttggaccatatttataattggcgcctcacttggaagtctctttggaggaaaaatgggggatgtccttgcaaaaccgtttcccaatgctgggaggatagttctttcacagataagtgcaggatcagccattccttttgcagctcttttgctgctggggttgcctgatgacccatccaccggattcatgcatgggctggtcttgttcatcatgggatggttcacttcctggaatgctccagcaactaacaatccaatatttgcagagatcgtccctgagaggtcccgtacgagtatctatgctctagatcaatcttttgaatccatcttatcatcatttgctcccccaatcgttgggattttggttcagcacgtttttggttacaaaccaattcctaaaggatcatcagactctgtagagattgaaacagatagagagaatgctgcagcacttgccaaggcactcttcactacaatggcaattcctatgacactctgtgtctcaatctactcgttcctttactgcacatacccaagagaccgggaacgggcaagaatgcaggcattgatagaatcagaaatgcaacatctggaaactagttatgctgcatcaggagaagaatactcacaacttaatgtttcagaatcaaaagtgctgaatggaaaagatgaaagtgatatcgacgtagaatatgcagcacacgagagcgttgagttggatgataatgatgaaaagtctctgctctcccatcagctaactttctcaaatatgaaagagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0002165 GO:0003006 GO:0003376 GO:0003674 GO:0005215 GO:0005319 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005770 GO:0005773 GO:0005774 GO:0006810 GO:0006869 GO:0006897 GO:0006915 GO:0006928 GO:0006950 GO:0006996 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007399 GO:0007416 GO:0007417 GO:0007528 GO:0007610 GO:0007617 GO:0007618 GO:0007619 GO:0008150 GO:0008219 GO:0008333 GO:0008347 GO:0008582 GO:0009267 GO:0009605 GO:0009653 GO:0009791 GO:0009886 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010001 GO:0010008 GO:0010623 GO:0010646 GO:0010648 GO:0010876 GO:0010941 GO:0012501 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016477 GO:0019098 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0031090 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031902 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0033554 GO:0035193 GO:0036465 GO:0040007 GO:0040008 GO:0040011 GO:0042063 GO:0042594 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045476 GO:0045477 GO:0045595 GO:0045924 GO:0046624 GO:0046907 GO:0048468 GO:0048477 GO:0048488 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048609 GO:0048638 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0050808 GO:0050896 GO:0051124 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051716 GO:0051960 GO:0051963 GO:0060180 GO:0060284 GO:0065007 GO:0065008 GO:0071496 GO:0071702 GO:0071840 GO:0080171 GO:0090092 GO:0090097 GO:0090099 GO:0090101 GO:0090520 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0098852 GO:0099003 GO:0099504 GO:1902742 GO:1904396 GO:1904748 GO:1905879 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1

Protein Analysis

989

Amino Acids

107.78

Weight (kDa)

6.24

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 71 - 256 5.1e-39 Malectin domain
Pkinase PF00069 339 - 453 1.4e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 342 - 453 2.3e-20 Protein tyrosine and serine/threonine kinase
MFS_1 PF07690 481 - 845 1.2e-40 Major Facilitator Superfamily
Sugar_tr PF00083 529 - 669 2.9e-11 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012873)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10190 AT5G10190 AT5G10190
fragaria_vesca FvH4_1g21090 FvH4_1g21100
malus_domestica MD01G1027800.v1.1
prunus_persica Prupe.6G183300_v2.0.a1
pyrus_communis pycom01g05610
rosa_chinensis RchiOBHm_Chr2g0114881
rosa_laevigata RLG00000018122 RLG00000018130
rosa_multiflora Rmu_sc0002764.1_g000041
rosa_roxburghii Rroxscaffold_2G00130370
rosa_rugosa Rorug02G0191300
rosa_samantha Rh2AG249900 Rh2CG254300 Rh2DG258100
rosa_wichuraiana Rw2G019470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 207, 2207
AatII GACGTC 1 cut(s) 562
Acc36I ACCTGC 3 cut(s) 614, 739, 760
AccB1I GGYRCC 1 cut(s) 2213
AccB7I CCANNNNNTGG 1 cut(s) 2543
AccI GTMKAC 3 cut(s) 10, 374, 1488
AccII CGCG 1 cut(s) 736
AciI CCGC 6 cut(s) 72, 736, 1041, 1459, 1653, 1970
AclWI GGATC 6 cut(s) 352, 1548, 1961, 2119, 2320, 2599
AcsI RAATTY 1 cut(s) 545
AcuI CTGAAG 3 cut(s) 961, 1673, 1857
AcyI GRCGYC 2 cut(s) 559, 2214
AdeI CACNNNGTG 2 cut(s) 1073, 2687
AfiI CCNNNNNNNGG 7 cut(s) 737, 2126, 2279, 2280, 2369, 2543, 2737
AflIII ACRYGT 2 cut(s) 517, 1304
AgsI TTSAA 8 cut(s) 22, 167, 689, 908, 1704, 2084, 2510, 2615
AhlI ACTAGT 2 cut(s) 815, 2786
AjnI CCWGG 6 cut(s) 193, 579, 1179, 1480, 2120, 2417
AjuI GAANNNNNNNTTGG 2 cut(s) 2639, 2671
Alw26I GTCTC 8 cut(s) 550, 1273, 1409, 1958, 2234, 2695, 2721, 2931
AlwI GGATC 6 cut(s) 352, 1548, 1961, 2119, 2320, 2599
AlwNI CAGNNNCTG 2 cut(s) 1418, 2603
AoxI GGCC 2 cut(s) 35, 190
ApoI RAATTY 1 cut(s) 545
AseI ATTAAT 1 cut(s) 219
AspLEI GCGC 2 cut(s) 736, 2216
AsuC2I CCSGG 3 cut(s) 69, 541, 2732
AvaII GGWCC 8 cut(s) 230, 290, 749, 965, 1049, 2038, 2196, 2472
BanI GGYRCC 1 cut(s) 2213
BanII GRGCYC 3 cut(s) 285, 1538, 1923
BauI CACGAG 1 cut(s) 2891
BbsI GAAGAC 1 cut(s) 237
BceAI ACGGC 2 cut(s) 678, 2199
BciT130I CCWGG 6 cut(s) 195, 581, 1181, 1482, 2122, 2419
BclI TGATCA 1 cut(s) 1258
BcnI CCSGG 3 cut(s) 69, 541, 2732
BcoDI GTCTC 8 cut(s) 550, 1273, 1409, 1958, 2234, 2695, 2721, 2931
BcuI ACTAGT 2 cut(s) 815, 2786
BfaI CTAG 6 cut(s) 816, 1332, 1442, 1826, 2495, 2787
BfmI CTRYAG 4 cut(s) 1057, 1107, 2604, 2634
BfoI RGCGCY 1 cut(s) 2217
BfuAI ACCTGC 3 cut(s) 614, 739, 760
BmcAI AGTACT 1 cut(s) 870
Bme1390I CCNGG 9 cut(s) 69, 195, 541, 581, 1181, 1482, 2122, 2419, 2732
Bme18I GGWCC 8 cut(s) 230, 290, 749, 965, 1049, 2038, 2196, 2472
BmiI GGNNCC 6 cut(s) 36, 1223, 1504, 1831, 2215, 2474
BmrFI CCNGG 9 cut(s) 69, 195, 541, 581, 1181, 1482, 2122, 2419, 2732
BmrI ACTGGG 2 cut(s) 843, 1536
BmsI GCATC 2 cut(s) 1121, 2807
BmuI ACTGGG 2 cut(s) 843, 1536
BpiI GAAGAC 1 cut(s) 237
BpmI CTGGAG 2 cut(s) 1262, 2412
Bpu10I CCTNAGC 1 cut(s) 2097
BpuEI CTTGAG 2 cut(s) 488, 497
BpuMI CCSGG 3 cut(s) 69, 541, 2732
BsaHI GRCGYC 2 cut(s) 559, 2214
BsaI GGTCTC 1 cut(s) 2721
BsaJI CCNNGG 7 cut(s) 193, 286, 580, 1120, 1786, 2120, 2646
BsaWI WCCGGW 2 cut(s) 778, 2369
Bsc4I CCNNNNNNNGG 7 cut(s) 737, 2126, 2279, 2280, 2369, 2543, 2737
Bse118I RCCGGY 1 cut(s) 37
Bse1I ACTGG 7 cut(s) 316, 358, 838, 1132, 1431, 1446, 1531
Bse3DI GCAATG 3 cut(s) 343, 1623, 2091
BseBI CCWGG 6 cut(s) 195, 581, 1181, 1482, 2122, 2419
BseDI CCNNGG 7 cut(s) 193, 286, 580, 1120, 1786, 2120, 2646
BseGI GGATG 6 cut(s) 1112, 1808, 2257, 2363, 2411, 2914
BseLI CCNNNNNNNGG 7 cut(s) 737, 2126, 2279, 2280, 2369, 2543, 2737
BseMI GCAATG 3 cut(s) 343, 1623, 2091
BseMII CTCAG 6 cut(s) 225, 383, 1134, 1197, 2111, 2457
BseNI ACTGG 7 cut(s) 316, 358, 838, 1132, 1431, 1446, 1531
BseRI GAGGAG 1 cut(s) 1666
BseYI CCCAGC 2 cut(s) 2279, 2344
BsgI GTGCAG 3 cut(s) 1186, 2328, 2698
Bsh1236I CGCG 1 cut(s) 736
BshFI GGCC 2 cut(s) 37, 192
BshNI GGYRCC 1 cut(s) 2213
BsiSI CCGG 6 cut(s) 38, 69, 540, 779, 2370, 2731
BsiWI CGTACG 1 cut(s) 2477
BslFI GGGAC 4 cut(s) 730, 1456, 2447, 2458
BslI CCNNNNNNNGG 7 cut(s) 737, 2126, 2279, 2280, 2369, 2543, 2737
BsmAI GTCTC 8 cut(s) 550, 1273, 1409, 1958, 2234, 2695, 2721, 2931
BsmBI CGTCTC 3 cut(s) 550, 1273, 1958
BsmFI GGGAC 4 cut(s) 730, 1456, 2447, 2458
BsmI GAATGC 5 cut(s) 585, 1904, 2428, 2635, 2751
BsnI GGCC 2 cut(s) 37, 192
Bso31I GGTCTC 1 cut(s) 2721
Bsp1286I GDGCHC 3 cut(s) 285, 1538, 1923
Bsp1407I TGTACA 1 cut(s) 1978
Bsp143I GATC 9 cut(s) 344, 1258, 1553, 1966, 2111, 2312, 2457, 2497, 2591
BspACI CCGC 6 cut(s) 72, 736, 1041, 1459, 1653, 1970
BspANI GGCC 2 cut(s) 37, 192
BspCNI CTCAG 6 cut(s) 226, 382, 1135, 1198, 2110, 2458
BspFNI CGCG 1 cut(s) 736
BspLI GGNNCC 6 cut(s) 36, 1223, 1504, 1831, 2215, 2474
BspMAI CTGCAG 2 cut(s) 1111, 2638
BspMI ACCTGC 3 cut(s) 614, 739, 760
BspPI GGATC 6 cut(s) 352, 1548, 1961, 2119, 2320, 2599
BspT107I GGYRCC 1 cut(s) 2213
BspTNI GGTCTC 1 cut(s) 2721
BsrDI GCAATG 3 cut(s) 343, 1623, 2091
BsrFI RCCGGY 1 cut(s) 37
BsrGI TGTACA 1 cut(s) 1978
BsrI ACTGG 7 cut(s) 316, 358, 838, 1132, 1431, 1446, 1531
BssAI RCCGGY 1 cut(s) 37
BssECI CCNNGG 7 cut(s) 193, 286, 580, 1120, 1786, 2120, 2646
BssMI GATC 9 cut(s) 344, 1258, 1553, 1966, 2111, 2312, 2457, 2497, 2591
BssNAI GTATAC 1 cut(s) 375
BssNI GRCGYC 2 cut(s) 559, 2214
BssSI CACGAG 1 cut(s) 2891
BssT1I CCWWGG 3 cut(s) 286, 1120, 2646
Bst1107I GTATAC 1 cut(s) 375
Bst2BI CACGAG 1 cut(s) 2891
Bst2UI CCWGG 6 cut(s) 195, 581, 1181, 1482, 2122, 2419
Bst4CI ACNGT 6 cut(s) 496, 796, 1253, 1420, 1787, 2268
Bst6I CTCTTC 3 cut(s) 1075, 1515, 2660
BstACI GRCGYC 2 cut(s) 559, 2214
BstAPI GCANNNNNTGC 1 cut(s) 2642
BstAUI TGTACA 1 cut(s) 1978
BstC8I GCNNGC 3 cut(s) 160, 1461, 2751
BstDEI CTNAG 7 cut(s) 234, 369, 1070, 1143, 1206, 2097, 2466
BstDSI CCRYGG 1 cut(s) 1786
BstF5I GGATG 6 cut(s) 1112, 1808, 2257, 2363, 2411, 2914
BstFNI CGCG 1 cut(s) 736
BstH2I RGCGCY 1 cut(s) 2217
BstHHI GCGC 2 cut(s) 736, 2216
BstKTI GATC 9 cut(s) 347, 1261, 1556, 1969, 2114, 2315, 2460, 2500, 2594
BstMAI GTCTC 8 cut(s) 550, 1273, 1409, 1958, 2234, 2695, 2721, 2931
BstMBI GATC 9 cut(s) 344, 1258, 1553, 1966, 2111, 2312, 2457, 2497, 2591
BstMWI GCNNNNNNNGC 8 cut(s) 189, 761, 770, 1595, 1634, 2315, 2350, 2642
BstNI CCWGG 6 cut(s) 195, 581, 1181, 1482, 2122, 2419
BstNSI RCATGY 1 cut(s) 521
BstSCI CCNGG 9 cut(s) 67, 193, 539, 579, 1179, 1480, 2120, 2417, 2730
BstSFI CTRYAG 4 cut(s) 1057, 1107, 2604, 2634
BstUI CGCG 1 cut(s) 736
BstV2I GAAGAC 1 cut(s) 237
BstX2I RGATCY 2 cut(s) 344, 1553
BstXI CCANNNNNNTGG 1 cut(s) 1916
BstYI RGATCY 2 cut(s) 344, 1553
BstZ17I GTATAC 1 cut(s) 375
BsuRI GGCC 2 cut(s) 37, 192
BtgI CCRYGG 1 cut(s) 1786
BtsCI GGATG 6 cut(s) 1112, 1808, 2257, 2363, 2411, 2914
BtsIMutI CAGTG 5 cut(s) 351, 775, 1203, 1386, 1424
BveI ACCTGC 3 cut(s) 614, 739, 760
Cac8I GCNNGC 3 cut(s) 160, 1461, 2751
CaiI CAGNNNCTG 2 cut(s) 1418, 2603
CfoI GCGC 2 cut(s) 736, 2216
Cfr10I RCCGGY 1 cut(s) 37
CseI GACGC 3 cut(s) 21, 947, 1592
CsiI ACCWGGT 1 cut(s) 1179
CviAII CATG 7 cut(s) 145, 518, 668, 1399, 2377, 2381, 2401
DdeI CTNAG 7 cut(s) 234, 369, 1070, 1143, 1206, 2097, 2466
DinI GGCGCC 1 cut(s) 2215
DpnI GATC 9 cut(s) 346, 1260, 1555, 1968, 2113, 2314, 2459, 2499, 2593
DpnII GATC 9 cut(s) 344, 1258, 1553, 1966, 2111, 2312, 2457, 2497, 2591
DraI TTTAAA 2 cut(s) 1287, 1713
DraIII CACNNNGTG 2 cut(s) 1073, 2687
Eam1104I CTCTTC 3 cut(s) 1075, 1515, 2660
EarI CTCTTC 3 cut(s) 1075, 1515, 2660
EciI GGCGGA 1 cut(s) 1056
Eco130I CCWWGG 3 cut(s) 286, 1120, 2646
Eco24I GRGCYC 3 cut(s) 285, 1538, 1923
Eco31I GGTCTC 1 cut(s) 2721
Eco32I GATATC 1 cut(s) 2869
Eco47I GGWCC 8 cut(s) 230, 290, 749, 965, 1049, 2038, 2196, 2472
Eco57I CTGAAG 3 cut(s) 961, 1673, 1857
EcoO109I RGGNCCY 3 cut(s) 230, 2038, 2472
EcoRII CCWGG 6 cut(s) 193, 579, 1179, 1480, 2120, 2417
EcoRV GATATC 1 cut(s) 2869
EcoT14I CCWWGG 3 cut(s) 286, 1120, 2646
EcoT22I ATGCAT 1 cut(s) 2382
EcoT38I GRGCYC 3 cut(s) 285, 1538, 1923
EgeI GGCGCC 1 cut(s) 2215
EheI GGCGCC 1 cut(s) 2215
ErhI CCWWGG 3 cut(s) 286, 1120, 2646
Esp3I CGTCTC 3 cut(s) 550, 1273, 1958
FaeI CATG 7 cut(s) 148, 521, 671, 1402, 2380, 2384, 2404
FalI AAGNNNNNCTT 2 cut(s) 2639, 2671
FaqI GGGAC 4 cut(s) 730, 1456, 2447, 2458
FatI CATG 7 cut(s) 144, 517, 667, 1398, 2376, 2380, 2400
FauI CCCGC 3 cut(s) 65, 729, 1452
FauNDI CATATG 1 cut(s) 745
FbaI TGATCA 1 cut(s) 1258
FblI GTMKAC 3 cut(s) 10, 374, 1488
FokI GGATG 6 cut(s) 1099, 1815, 2264, 2350, 2418, 2921
FriOI GRGCYC 3 cut(s) 285, 1538, 1923
FspBI CTAG 6 cut(s) 816, 1332, 1442, 1826, 2495, 2787
GlaI GCGC 2 cut(s) 735, 2215
GsaI CCCAGC 2 cut(s) 2283, 2348
GsuI CTGGAG 2 cut(s) 1262, 2412
HaeII RGCGCY 1 cut(s) 2217
HaeIII GGCC 2 cut(s) 37, 192
HapII CCGG 6 cut(s) 38, 69, 540, 779, 2370, 2731
HgaI GACGC 3 cut(s) 21, 947, 1592
HhaI GCGC 2 cut(s) 736, 2216
Hin1I GRCGYC 2 cut(s) 559, 2214
Hin1II CATG 7 cut(s) 148, 521, 671, 1402, 2380, 2384, 2404
Hin6I GCGC 2 cut(s) 734, 2214
HinP1I GCGC 2 cut(s) 734, 2214
HincII GTYRAC 9 cut(s) 11, 43, 63, 83, 104, 125, 136, 1302, 1438
HindII GTYRAC 9 cut(s) 11, 43, 63, 83, 104, 125, 136, 1302, 1438
HindIII AAGCTT 1 cut(s) 1028
HpaII CCGG 6 cut(s) 38, 69, 540, 779, 2370, 2731
Hpy99I CGWCG 3 cut(s) 15, 941, 2876
HpyAV CCTTC 5 cut(s) 173, 265, 985, 1697, 2029
HpyCH4III ACNGT 6 cut(s) 496, 796, 1253, 1420, 1787, 2268
HpyCH4IV ACGT 7 cut(s) 242, 559, 1282, 1306, 1620, 2562, 2874
HpyF10VI GCNNNNNNNGC 8 cut(s) 189, 761, 770, 1595, 1634, 2315, 2350, 2642
HpyF3I CTNAG 7 cut(s) 234, 369, 1070, 1143, 1206, 2097, 2466
HpySE526I ACGT 7 cut(s) 242, 559, 1282, 1306, 1620, 2562, 2874
Hsp92I GRCGYC 2 cut(s) 559, 2214
Hsp92II CATG 7 cut(s) 148, 521, 671, 1402, 2380, 2384, 2404
HspAI GCGC 2 cut(s) 734, 2214
KasI GGCGCC 1 cut(s) 2213
Ksp22I TGATCA 1 cut(s) 1258
Kzo9I GATC 9 cut(s) 344, 1258, 1553, 1966, 2111, 2312, 2457, 2497, 2591
LmnI GCTCC 7 cut(s) 1227, 1502, 1835, 2146, 2155, 2431, 2536
LweI GCATC 2 cut(s) 1121, 2807
MabI ACCWGGT 1 cut(s) 1179
MaeI CTAG 6 cut(s) 816, 1332, 1442, 1826, 2495, 2787
MaeII ACGT 7 cut(s) 242, 559, 1282, 1306, 1620, 2562, 2874
MaeIII GTNAC 8 cut(s) 307, 485, 800, 1138, 1420, 1604, 1752, 2570
MalI GATC 9 cut(s) 346, 1260, 1555, 1968, 2113, 2314, 2459, 2499, 2593
MboI GATC 9 cut(s) 344, 1258, 1553, 1966, 2111, 2312, 2457, 2497, 2591
MfeI CAATTG 1 cut(s) 1100
MflI RGATCY 2 cut(s) 344, 1553
MhlI GDGCHC 3 cut(s) 285, 1538, 1923
Mly113I GGCGCC 1 cut(s) 2214
MlyI GAGTC 7 cut(s) 16, 1375, 1478, 1494, 1537, 1760, 2594
MmeI TCCRAC 7 cut(s) 322, 836, 943, 1702, 1874, 2133, 2886
Mph1103I ATGCAT 1 cut(s) 2382
MseI TTAA 8 cut(s) 219, 1215, 1286, 1311, 1340, 1712, 2046, 2823
MslI CAYNNNNRTG 3 cut(s) 1403, 1801, 2663
MspA1I CMGCKG 1 cut(s) 1459
MspI CCGG 6 cut(s) 38, 69, 540, 779, 2370, 2731
MspR9I CCNGG 9 cut(s) 69, 195, 541, 581, 1181, 1482, 2122, 2419, 2732
MunI CAATTG 1 cut(s) 1100
Mva1269I GAATGC 5 cut(s) 585, 1904, 2428, 2635, 2751
MvaI CCWGG 6 cut(s) 195, 581, 1181, 1482, 2122, 2419
MvnI CGCG 1 cut(s) 736
MwoI GCNNNNNNNGC 8 cut(s) 189, 761, 770, 1595, 1634, 2315, 2350, 2642
NarI GGCGCC 1 cut(s) 2214
NciI CCSGG 3 cut(s) 69, 541, 2732
NdeI CATATG 1 cut(s) 745
NdeII GATC 9 cut(s) 344, 1258, 1553, 1966, 2111, 2312, 2457, 2497, 2591
NlaIII CATG 7 cut(s) 148, 521, 671, 1402, 2380, 2384, 2404
NlaIV GGNNCC 6 cut(s) 36, 1223, 1504, 1831, 2215, 2474
NmuCI GTSAC 4 cut(s) 307, 1420, 1604, 1752
NsiI ATGCAT 1 cut(s) 2382
NspI RCATGY 1 cut(s) 521
PciI ACATGT 1 cut(s) 517
PctI GAATGC 5 cut(s) 585, 1904, 2428, 2635, 2751
Pfl23II CGTACG 1 cut(s) 2477
PflMI CCANNNNNTGG 1 cut(s) 2543
PfoI TCCNGGA 1 cut(s) 2417
PleI GAGTC 7 cut(s) 15, 1374, 1477, 1493, 1537, 1760, 2594
PluTI GGCGCC 1 cut(s) 2217
PpsI GAGTC 7 cut(s) 15, 1374, 1477, 1493, 1537, 1760, 2594
PpuMI RGGWCCY 3 cut(s) 230, 2038, 2472
PscI ACATGT 1 cut(s) 517
PshBI ATTAAT 1 cut(s) 219
PsiI TTATAA 2 cut(s) 207, 2207
Psp5II RGGWCCY 3 cut(s) 230, 2038, 2472
Psp6I CCWGG 6 cut(s) 193, 579, 1179, 1480, 2120, 2417
PspFI CCCAGC 2 cut(s) 2279, 2344
PspGI CCWGG 6 cut(s) 193, 579, 1179, 1480, 2120, 2417
PspLI CGTACG 1 cut(s) 2477
PspN4I GGNNCC 6 cut(s) 36, 1223, 1504, 1831, 2215, 2474
PspPPI RGGWCCY 3 cut(s) 230, 2038, 2472
PsrI GAACNNNNNNTAC 2 cut(s) 861, 893
PstI CTGCAG 2 cut(s) 1111, 2638
PstNI CAGNNNCTG 2 cut(s) 1418, 2603
PsuI RGATCY 2 cut(s) 344, 1553
RseI CAYNNNNRTG 3 cut(s) 1403, 1801, 2663
SalI GTCGAC 1 cut(s) 9
SaqAI TTAA 8 cut(s) 219, 1215, 1286, 1311, 1340, 1712, 2046, 2823
Sau3AI GATC 9 cut(s) 344, 1258, 1553, 1966, 2111, 2312, 2457, 2497, 2591
ScaI AGTACT 1 cut(s) 870
SchI GAGTC 7 cut(s) 16, 1375, 1478, 1494, 1537, 1760, 2594
ScrFI CCNGG 9 cut(s) 69, 195, 541, 581, 1181, 1482, 2122, 2419, 2732
SduI GDGCHC 3 cut(s) 285, 1538, 1923
SexAI ACCWGGT 1 cut(s) 1179
SfaNI GCATC 2 cut(s) 1121, 2807
SfcI CTRYAG 4 cut(s) 1057, 1107, 2604, 2634
SfoI GGCGCC 1 cut(s) 2215
SinI GGWCC 8 cut(s) 230, 290, 749, 965, 1049, 2038, 2196, 2472
SmiMI CAYNNNNRTG 3 cut(s) 1403, 1801, 2663
SmlI CTYRAG 2 cut(s) 476, 503
SmoI CTYRAG 2 cut(s) 476, 503
SpeI ACTAGT 2 cut(s) 815, 2786
SsiI CCGC 6 cut(s) 72, 736, 1041, 1459, 1653, 1970
SspDI GGCGCC 1 cut(s) 2213
SspI AATATT 1 cut(s) 2448
SspMI CTAG 6 cut(s) 816, 1332, 1442, 1826, 2495, 2787
StyD4I CCNGG 9 cut(s) 67, 193, 539, 579, 1179, 1480, 2120, 2417, 2730
StyI CCWWGG 3 cut(s) 286, 1120, 2646
TaaI ACNGT 6 cut(s) 496, 796, 1253, 1420, 1787, 2268
TaiI ACGT 7 cut(s) 245, 562, 1285, 1309, 1623, 2565, 2877
TaqI TCGA 4 cut(s) 5, 10, 829, 2871
TatI WGTACW 3 cut(s) 868, 1855, 1978
TauI GCSGC 1 cut(s) 1655
Tru1I TTAA 8 cut(s) 219, 1215, 1286, 1311, 1340, 1712, 2046, 2823
Tru9I TTAA 8 cut(s) 219, 1215, 1286, 1311, 1340, 1712, 2046, 2823
TscAI CASTG 5 cut(s) 358, 775, 1210, 1386, 1431
TseFI GTSAC 4 cut(s) 307, 1420, 1604, 1752
Tsp45I GTSAC 4 cut(s) 307, 1420, 1604, 1752
TspGWI ACGGA 1 cut(s) 1209
TspRI CASTG 5 cut(s) 358, 775, 1210, 1386, 1431
Van91I CCANNNNNTGG 1 cut(s) 2543
VpaK11BI GGWCC 8 cut(s) 230, 290, 749, 965, 1049, 2038, 2196, 2472
VspI ATTAAT 1 cut(s) 219
XapI RAATTY 1 cut(s) 545
XbaI TCTAGA 1 cut(s) 2494
XceI RCATGY 1 cut(s) 521
XcmI CCANNNNNNNNNTGG 1 cut(s) 1876
XmiI GTMKAC 3 cut(s) 10, 374, 1488
XspI CTAG 6 cut(s) 816, 1332, 1442, 1826, 2495, 2787
ZraI GACGTC 1 cut(s) 560
ZrmI AGTACT 1 cut(s) 870
Zsp2I ATGCAT 1 cut(s) 2382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.