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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002882.1_g000005 Rmu_sc0003624.1_g000027 Rmu_sc0008929.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00035650 |
| rosa_samantha | Rh3AG116100 Rh4CG249300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 361, 367 |
| AclWI | GGATC | 2 cut(s) | 246, 259 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 50, 136 |
| AgsI | TTSAA | 1 cut(s) | 247 |
| AjnI | CCWGG | 2 cut(s) | 86, 395 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 32, 64 |
| Alw26I | GTCTC | 1 cut(s) | 19 |
| AlwI | GGATC | 2 cut(s) | 246, 259 |
| AoxI | GGCC | 3 cut(s) | 52, 90, 393 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 32, 64 |
| AspLEI | GCGC | 1 cut(s) | 161 |
| AspS9I | GGNCC | 3 cut(s) | 53, 90, 393 |
| BamHI | GGATCC | 1 cut(s) | 251 |
| BbsI | GAAGAC | 1 cut(s) | 237 |
| BccI | CCATC | 2 cut(s) | 52, 170 |
| BciT130I | CCWGG | 2 cut(s) | 88, 397 |
| BcoDI | GTCTC | 1 cut(s) | 19 |
| BfmI | CTRYAG | 1 cut(s) | 100 |
| Bme1390I | CCNGG | 2 cut(s) | 88, 397 |
| BmgT120I | GGNCC | 3 cut(s) | 53, 90, 393 |
| BmiI | GGNNCC | 1 cut(s) | 253 |
| BmrFI | CCNGG | 2 cut(s) | 88, 397 |
| BpiI | GAAGAC | 1 cut(s) | 237 |
| BsaBI | GATNNNNATC | 1 cut(s) | 285 |
| BsaJI | CCNNGG | 2 cut(s) | 87, 255 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 50, 136 |
| Bse8I | GATNNNNATC | 1 cut(s) | 285 |
| BseBI | CCWGG | 2 cut(s) | 88, 397 |
| BseDI | CCNNGG | 2 cut(s) | 87, 255 |
| BseGI | GGATG | 2 cut(s) | 10, 205 |
| BseJI | GATNNNNATC | 1 cut(s) | 285 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 50, 136 |
| BseRI | GAGGAG | 6 cut(s) | 203, 230, 251, 272, 275, 317 |
| BseYI | CCCAGC | 1 cut(s) | 19 |
| BshFI | GGCC | 3 cut(s) | 54, 92, 395 |
| BsiSI | CCGG | 1 cut(s) | 51 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 50, 136 |
| BsmAI | GTCTC | 1 cut(s) | 19 |
| BsmI | GAATGC | 1 cut(s) | 68 |
| BsnI | GGCC | 3 cut(s) | 54, 92, 395 |
| Bsp143I | GATC | 1 cut(s) | 251 |
| BspACI | CCGC | 2 cut(s) | 361, 367 |
| BspANI | GGCC | 3 cut(s) | 54, 92, 395 |
| BspLI | GGNNCC | 1 cut(s) | 253 |
| BspPI | GGATC | 2 cut(s) | 246, 259 |
| BssECI | CCNNGG | 2 cut(s) | 87, 255 |
| BssMI | GATC | 1 cut(s) | 251 |
| Bst2UI | CCWGG | 2 cut(s) | 88, 397 |
| Bst4CI | ACNGT | 2 cut(s) | 13, 356 |
| Bst6I | CTCTTC | 2 cut(s) | 294, 306 |
| BstC8I | GCNNGC | 1 cut(s) | 66 |
| BstF5I | GGATG | 2 cut(s) | 10, 205 |
| BstHHI | GCGC | 1 cut(s) | 161 |
| BstKTI | GATC | 1 cut(s) | 254 |
| BstMAI | GTCTC | 1 cut(s) | 19 |
| BstMBI | GATC | 1 cut(s) | 251 |
| BstNI | CCWGG | 2 cut(s) | 88, 397 |
| BstSCI | CCNGG | 2 cut(s) | 86, 395 |
| BstSFI | CTRYAG | 1 cut(s) | 100 |
| BstV2I | GAAGAC | 1 cut(s) | 237 |
| BstX2I | RGATCY | 1 cut(s) | 251 |
| BstYI | RGATCY | 1 cut(s) | 251 |
| BsuRI | GGCC | 3 cut(s) | 54, 92, 395 |
| BtsCI | GGATG | 2 cut(s) | 10, 205 |
| BtsIMutI | CAGTG | 1 cut(s) | 9 |
| Cac8I | GCNNGC | 1 cut(s) | 66 |
| CfoI | GCGC | 1 cut(s) | 161 |
| Cfr13I | GGNCC | 3 cut(s) | 53, 90, 393 |
| CviJI | RGCY | 7 cut(s) | 23, 54, 92, 98, 243, 395, 403 |
| CviKI_1 | RGCY | 7 cut(s) | 23, 54, 92, 98, 243, 395, 403 |
| DpnI | GATC | 1 cut(s) | 253 |
| DpnII | GATC | 1 cut(s) | 251 |
| Eam1104I | CTCTTC | 2 cut(s) | 294, 306 |
| EarI | CTCTTC | 2 cut(s) | 294, 306 |
| EciI | GGCGGA | 1 cut(s) | 382 |
| EcoRII | CCWGG | 2 cut(s) | 86, 395 |
| FaiI | YATR | 3 cut(s) | 58, 60, 102 |
| FauNDI | CATATG | 1 cut(s) | 58 |
| FokI | GGATG | 2 cut(s) | 17, 212 |
| GlaI | GCGC | 1 cut(s) | 160 |
| GsaI | CCCAGC | 1 cut(s) | 23 |
| HaeIII | GGCC | 3 cut(s) | 54, 92, 395 |
| HapII | CCGG | 1 cut(s) | 51 |
| HhaI | GCGC | 1 cut(s) | 161 |
| Hin6I | GCGC | 1 cut(s) | 159 |
| HinP1I | GCGC | 1 cut(s) | 159 |
| HinfI | GANTC | 5 cut(s) | 113, 150, 281, 305, 317 |
| HpaII | CCGG | 1 cut(s) | 51 |
| Hpy188I | TCNGA | 2 cut(s) | 256, 310 |
| Hpy188III | TCNNGA | 2 cut(s) | 147, 290 |
| HpyAV | CCTTC | 1 cut(s) | 241 |
| HpyCH4III | ACNGT | 2 cut(s) | 13, 356 |
| HspAI | GCGC | 1 cut(s) | 159 |
| Kzo9I | GATC | 1 cut(s) | 251 |
| LpnPI | CCDG | 8 cut(s) | 33, 50, 64, 73, 100, 275, 382, 409 |
| MalI | GATC | 1 cut(s) | 253 |
| MboI | GATC | 1 cut(s) | 251 |
| MboII | GAAGA | 7 cut(s) | 233, 242, 287, 290, 311, 323, 338 |
| MflI | RGATCY | 1 cut(s) | 251 |
| MlyI | GAGTC | 2 cut(s) | 122, 314 |
| MmeI | TCCRAC | 2 cut(s) | 246, 288 |
| MspI | CCGG | 1 cut(s) | 51 |
| MspR9I | CCNGG | 2 cut(s) | 88, 397 |
| Mva1269I | GAATGC | 1 cut(s) | 68 |
| MvaI | CCWGG | 2 cut(s) | 88, 397 |
| NdeI | CATATG | 1 cut(s) | 58 |
| NdeII | GATC | 1 cut(s) | 251 |
| NlaIV | GGNNCC | 1 cut(s) | 253 |
| PctI | GAATGC | 1 cut(s) | 68 |
| PfeI | GAWTC | 3 cut(s) | 150, 281, 317 |
| PleI | GAGTC | 2 cut(s) | 121, 313 |
| PpsI | GAGTC | 2 cut(s) | 121, 313 |
| Psp6I | CCWGG | 2 cut(s) | 86, 395 |
| PspFI | CCCAGC | 1 cut(s) | 19 |
| PspGI | CCWGG | 2 cut(s) | 86, 395 |
| PspN4I | GGNNCC | 1 cut(s) | 253 |
| PspPI | GGNCC | 3 cut(s) | 53, 90, 393 |
| PsuI | RGATCY | 1 cut(s) | 251 |
| Sau3AI | GATC | 1 cut(s) | 251 |
| Sau96I | GGNCC | 3 cut(s) | 53, 90, 393 |
| SchI | GAGTC | 2 cut(s) | 122, 314 |
| ScrFI | CCNGG | 2 cut(s) | 88, 397 |
| SetI | ASST | 4 cut(s) | 89, 141, 211, 386 |
| SfcI | CTRYAG | 1 cut(s) | 100 |
| SsiI | CCGC | 2 cut(s) | 361, 367 |
| StyD4I | CCNGG | 2 cut(s) | 86, 395 |
| TaaI | ACNGT | 2 cut(s) | 13, 356 |
| TaqI | TCGA | 4 cut(s) | 146, 173, 320, 333 |
| TfiI | GAWTC | 3 cut(s) | 150, 281, 317 |
| TscAI | CASTG | 1 cut(s) | 16 |
| TspDTI | ATGAA | 2 cut(s) | 288, 339 |
| TspRI | CASTG | 1 cut(s) | 16 |