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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002882.1_g000005 Rmu_sc0003624.1_g000027 Rmu_sc0008929.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00035650 |
| rosa_samantha | Rh3AG116100 Rh4CG249300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 11 |
| AciI | CCGC | 4 cut(s) | 116, 329, 336, 342 |
| AclWI | GGATC | 2 cut(s) | 234, 247 |
| AcyI | GRCGYC | 1 cut(s) | 6 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 50 |
| AgsI | TTSAA | 1 cut(s) | 235 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 266, 298 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 32, 64 |
| Alw26I | GTCTC | 1 cut(s) | 19 |
| AlwI | GGATC | 2 cut(s) | 234, 247 |
| AoxI | GGCC | 2 cut(s) | 52, 90 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 32, 64 |
| AspS9I | GGNCC | 2 cut(s) | 53, 90 |
| AsuHPI | GGTGA | 1 cut(s) | 152 |
| AsuII | TTCGAA | 1 cut(s) | 272 |
| BamHI | GGATCC | 1 cut(s) | 239 |
| BbsI | GAAGAC | 1 cut(s) | 225 |
| BclI | TGATCA | 1 cut(s) | 148 |
| BcoDI | GTCTC | 1 cut(s) | 19 |
| BfmI | CTRYAG | 1 cut(s) | 100 |
| BmgT120I | GGNCC | 2 cut(s) | 53, 90 |
| BmiI | GGNNCC | 1 cut(s) | 241 |
| BpiI | GAAGAC | 1 cut(s) | 225 |
| Bpu14I | TTCGAA | 1 cut(s) | 272 |
| BsaAI | YACGTR | 1 cut(s) | 61 |
| BsaBI | GATNNNNATC | 1 cut(s) | 273 |
| BsaHI | GRCGYC | 1 cut(s) | 6 |
| BsaJI | CCNNGG | 1 cut(s) | 243 |
| BsaWI | WCCGGW | 1 cut(s) | 137 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 50 |
| Bse8I | GATNNNNATC | 1 cut(s) | 273 |
| BseDI | CCNNGG | 1 cut(s) | 243 |
| BseGI | GGATG | 2 cut(s) | 193, 304 |
| BseJI | GATNNNNATC | 1 cut(s) | 273 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 50 |
| BseRI | GAGGAG | 6 cut(s) | 191, 218, 239, 260, 263, 305 |
| BshFI | GGCC | 2 cut(s) | 54, 92 |
| BsiSI | CCGG | 2 cut(s) | 51, 138 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 50 |
| BsmAI | GTCTC | 1 cut(s) | 19 |
| BsmI | GAATGC | 1 cut(s) | 68 |
| BsnI | GGCC | 2 cut(s) | 54, 92 |
| Bsp119I | TTCGAA | 1 cut(s) | 272 |
| Bsp143I | GATC | 2 cut(s) | 148, 239 |
| BspACI | CCGC | 4 cut(s) | 116, 329, 336, 342 |
| BspANI | GGCC | 2 cut(s) | 54, 92 |
| BspLI | GGNNCC | 1 cut(s) | 241 |
| BspPI | GGATC | 2 cut(s) | 234, 247 |
| BspT104I | TTCGAA | 1 cut(s) | 272 |
| BssECI | CCNNGG | 1 cut(s) | 243 |
| BssMI | GATC | 2 cut(s) | 148, 239 |
| BssNI | GRCGYC | 1 cut(s) | 6 |
| Bst4CI | ACNGT | 1 cut(s) | 13 |
| Bst6I | CTCTTC | 1 cut(s) | 282 |
| BstACI | GRCGYC | 1 cut(s) | 6 |
| BstBAI | YACGTR | 1 cut(s) | 61 |
| BstBI | TTCGAA | 1 cut(s) | 272 |
| BstC8I | GCNNGC | 1 cut(s) | 66 |
| BstF5I | GGATG | 2 cut(s) | 193, 304 |
| BstKTI | GATC | 2 cut(s) | 151, 242 |
| BstMAI | GTCTC | 1 cut(s) | 19 |
| BstMBI | GATC | 2 cut(s) | 148, 239 |
| BstSFI | CTRYAG | 1 cut(s) | 100 |
| BstV2I | GAAGAC | 1 cut(s) | 225 |
| BstX2I | RGATCY | 1 cut(s) | 239 |
| BstYI | RGATCY | 1 cut(s) | 239 |
| BsuRI | GGCC | 2 cut(s) | 54, 92 |
| BtsCI | GGATG | 2 cut(s) | 193, 304 |
| BtsIMutI | CAGTG | 1 cut(s) | 9 |
| Cac8I | GCNNGC | 1 cut(s) | 66 |
| Cfr13I | GGNCC | 2 cut(s) | 53, 90 |
| CseI | GACGC | 1 cut(s) | 14 |
| CviJI | RGCY | 6 cut(s) | 54, 92, 98, 124, 231, 369 |
| CviKI_1 | RGCY | 6 cut(s) | 54, 92, 98, 124, 231, 369 |
| DpnI | GATC | 2 cut(s) | 150, 241 |
| DpnII | GATC | 2 cut(s) | 148, 239 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 11 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 11 |
| Eam1104I | CTCTTC | 1 cut(s) | 282 |
| EarI | CTCTTC | 1 cut(s) | 282 |
| EciI | GGCGGA | 1 cut(s) | 357 |
| FaiI | YATR | 1 cut(s) | 58 |
| FauI | CCCGC | 1 cut(s) | 109 |
| FbaI | TGATCA | 1 cut(s) | 148 |
| FokI | GGATG | 2 cut(s) | 200, 311 |
| HaeIII | GGCC | 2 cut(s) | 54, 92 |
| HapII | CCGG | 2 cut(s) | 51, 138 |
| HgaI | GACGC | 1 cut(s) | 14 |
| Hin1I | GRCGYC | 1 cut(s) | 6 |
| HinfI | GANTC | 3 cut(s) | 269, 274, 293 |
| HpaII | CCGG | 2 cut(s) | 51, 138 |
| HphI | GGTGA | 1 cut(s) | 152 |
| Hpy188I | TCNGA | 2 cut(s) | 244, 298 |
| Hpy188III | TCNNGA | 1 cut(s) | 278 |
| Hpy99I | CGWCG | 1 cut(s) | 49 |
| HpyAV | CCTTC | 2 cut(s) | 178, 229 |
| HpyCH4III | ACNGT | 1 cut(s) | 13 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| Hsp92I | GRCGYC | 1 cut(s) | 6 |
| Ksp22I | TGATCA | 1 cut(s) | 148 |
| Kzo9I | GATC | 2 cut(s) | 148, 239 |
| LpnPI | CCDG | 6 cut(s) | 50, 64, 110, 137, 151, 263 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MalI | GATC | 2 cut(s) | 150, 241 |
| MboI | GATC | 2 cut(s) | 148, 239 |
| MboII | GAAGA | 6 cut(s) | 193, 221, 230, 278, 299, 314 |
| MflI | RGATCY | 1 cut(s) | 239 |
| MluCI | AATT | 1 cut(s) | 27 |
| MlyI | GAGTC | 1 cut(s) | 302 |
| MmeI | TCCRAC | 2 cut(s) | 234, 276 |
| MspI | CCGG | 2 cut(s) | 51, 138 |
| Mva1269I | GAATGC | 1 cut(s) | 68 |
| NdeII | GATC | 2 cut(s) | 148, 239 |
| NlaIV | GGNNCC | 1 cut(s) | 241 |
| NspV | TTCGAA | 1 cut(s) | 272 |
| PctI | GAATGC | 1 cut(s) | 68 |
| PfeI | GAWTC | 2 cut(s) | 269, 274 |
| PleI | GAGTC | 1 cut(s) | 301 |
| PpsI | GAGTC | 1 cut(s) | 301 |
| Ppu21I | YACGTR | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 1 cut(s) | 241 |
| PspPI | GGNCC | 2 cut(s) | 53, 90 |
| PsuI | RGATCY | 1 cut(s) | 239 |
| Sau3AI | GATC | 2 cut(s) | 148, 239 |
| Sau96I | GGNCC | 2 cut(s) | 53, 90 |
| SchI | GAGTC | 1 cut(s) | 302 |
| SetI | ASST | 6 cut(s) | 63, 147, 156, 163, 199, 361 |
| SfcI | CTRYAG | 1 cut(s) | 100 |
| SfuI | TTCGAA | 1 cut(s) | 272 |
| Sse9I | AATT | 1 cut(s) | 27 |
| SsiI | CCGC | 4 cut(s) | 116, 329, 336, 342 |
| TaaI | ACNGT | 1 cut(s) | 13 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 2 cut(s) | 272, 309 |
| TasI | AATT | 1 cut(s) | 27 |
| TfiI | GAWTC | 2 cut(s) | 269, 274 |
| TscAI | CASTG | 1 cut(s) | 16 |
| TspDTI | ATGAA | 1 cut(s) | 315 |
| TspRI | CASTG | 1 cut(s) | 16 |