Protein of unknown function (DUF1666)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000025875 |
| rosa_multiflora | Rmu_sc0003116.1_g000029 Rmu_sc0025983.1_g000001 Rmu_sc0027086.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00203750 |
| rosa_samantha | Rh3AG014600 Rh3BG014400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 82 |
| AcuI | CTGAAG | 1 cut(s) | 25 |
| AfaI | GTAC | 1 cut(s) | 105 |
| AgsI | TTSAA | 3 cut(s) | 364, 416, 448 |
| AluBI | AGCT | 4 cut(s) | 116, 329, 373, 389 |
| AluI | AGCT | 4 cut(s) | 116, 329, 373, 389 |
| Alw21I | GWGCWC | 1 cut(s) | 375 |
| Alw26I | GTCTC | 2 cut(s) | 432, 476 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| AspS9I | GGNCC | 1 cut(s) | 288 |
| AvaII | GGWCC | 1 cut(s) | 288 |
| BanII | GRGCYC | 1 cut(s) | 375 |
| BbsI | GAAGAC | 2 cut(s) | 183, 455 |
| Bbv12I | GWGCWC | 1 cut(s) | 375 |
| BccI | CCATC | 2 cut(s) | 194, 223 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 34, 68 |
| BclI | TGATCA | 1 cut(s) | 271 |
| BcoDI | GTCTC | 2 cut(s) | 432, 476 |
| BfaI | CTAG | 3 cut(s) | 96, 240, 248 |
| Bme18I | GGWCC | 1 cut(s) | 288 |
| BmgT120I | GGNCC | 1 cut(s) | 288 |
| BmiI | GGNNCC | 1 cut(s) | 289 |
| BpiI | GAAGAC | 2 cut(s) | 183, 455 |
| BpuEI | CTTGAG | 2 cut(s) | 359, 440 |
| BsaWI | WCCGGW | 1 cut(s) | 86 |
| Bse1I | ACTGG | 1 cut(s) | 400 |
| BseGI | GGATG | 1 cut(s) | 445 |
| BseMII | CTCAG | 2 cut(s) | 23, 297 |
| BseNI | ACTGG | 1 cut(s) | 400 |
| BsiHKAI | GWGCWC | 1 cut(s) | 375 |
| BsiSI | CCGG | 1 cut(s) | 87 |
| BsmAI | GTCTC | 2 cut(s) | 432, 476 |
| Bsp1286I | GDGCHC | 1 cut(s) | 375 |
| Bsp1407I | TGTACA | 1 cut(s) | 103 |
| Bsp143I | GATC | 1 cut(s) | 271 |
| BspCNI | CTCAG | 2 cut(s) | 22, 298 |
| BspLI | GGNNCC | 1 cut(s) | 289 |
| BsrGI | TGTACA | 1 cut(s) | 103 |
| BsrI | ACTGG | 1 cut(s) | 400 |
| BssMI | GATC | 1 cut(s) | 271 |
| Bst4CI | ACNGT | 1 cut(s) | 103 |
| Bst6I | CTCTTC | 2 cut(s) | 56, 246 |
| BstAUI | TGTACA | 1 cut(s) | 103 |
| BstDEI | CTNAG | 2 cut(s) | 9, 306 |
| BstF5I | GGATG | 1 cut(s) | 445 |
| BstKTI | GATC | 1 cut(s) | 274 |
| BstMAI | GTCTC | 2 cut(s) | 432, 476 |
| BstMBI | GATC | 1 cut(s) | 271 |
| BstV2I | GAAGAC | 2 cut(s) | 183, 455 |
| BtsCI | GGATG | 1 cut(s) | 445 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cfr13I | GGNCC | 1 cut(s) | 288 |
| Csp6I | GTAC | 1 cut(s) | 104 |
| CviAII | CATG | 2 cut(s) | 478, 489 |
| CviJI | RGCY | 5 cut(s) | 116, 196, 329, 373, 389 |
| CviKI_1 | RGCY | 5 cut(s) | 116, 196, 329, 373, 389 |
| CviQI | GTAC | 1 cut(s) | 104 |
| DdeI | CTNAG | 2 cut(s) | 9, 306 |
| DpnI | GATC | 1 cut(s) | 273 |
| DpnII | GATC | 1 cut(s) | 271 |
| Eam1104I | CTCTTC | 2 cut(s) | 56, 246 |
| EarI | CTCTTC | 2 cut(s) | 56, 246 |
| Ecl136II | GAGCTC | 1 cut(s) | 373 |
| Eco24I | GRGCYC | 1 cut(s) | 375 |
| Eco47I | GGWCC | 1 cut(s) | 288 |
| Eco53kI | GAGCTC | 1 cut(s) | 373 |
| Eco57I | CTGAAG | 1 cut(s) | 25 |
| EcoICRI | GAGCTC | 1 cut(s) | 373 |
| EcoRI | GAATTC | 1 cut(s) | 82 |
| EcoT38I | GRGCYC | 1 cut(s) | 375 |
| FaeI | CATG | 2 cut(s) | 481, 492 |
| FaiI | YATR | 3 cut(s) | 437, 479, 490 |
| FatI | CATG | 2 cut(s) | 477, 488 |
| FbaI | TGATCA | 1 cut(s) | 271 |
| FokI | GGATG | 1 cut(s) | 452 |
| FriOI | GRGCYC | 1 cut(s) | 375 |
| FspBI | CTAG | 3 cut(s) | 96, 240, 248 |
| HapII | CCGG | 1 cut(s) | 87 |
| Hin1II | CATG | 2 cut(s) | 481, 492 |
| HindIII | AAGCTT | 1 cut(s) | 327 |
| HinfI | GANTC | 6 cut(s) | 36, 119, 125, 311, 419, 425 |
| HpaII | CCGG | 1 cut(s) | 87 |
| Hpy188I | TCNGA | 9 cut(s) | 19, 35, 75, 124, 130, 307, 316, 386, 424 |
| Hpy188III | TCNNGA | 4 cut(s) | 344, 376, 413, 431 |
| HpyCH4III | ACNGT | 1 cut(s) | 103 |
| HpyCH4V | TGCA | 1 cut(s) | 190 |
| HpyF3I | CTNAG | 2 cut(s) | 9, 306 |
| Hsp92II | CATG | 2 cut(s) | 481, 492 |
| Ksp22I | TGATCA | 1 cut(s) | 271 |
| Kzo9I | GATC | 1 cut(s) | 271 |
| LmnI | GCTCC | 1 cut(s) | 370 |
| LpnPI | CCDG | 5 cut(s) | 92, 100, 210, 381, 416 |
| MaeI | CTAG | 3 cut(s) | 96, 240, 248 |
| MalI | GATC | 1 cut(s) | 273 |
| MboI | GATC | 1 cut(s) | 271 |
| MhlI | GDGCHC | 1 cut(s) | 375 |
| MluCI | AATT | 3 cut(s) | 67, 82, 408 |
| MlyI | GAGTC | 2 cut(s) | 305, 434 |
| MmeI | TCCRAC | 1 cut(s) | 42 |
| MnlI | CCTC | 2 cut(s) | 72, 301 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| MspI | CCGG | 1 cut(s) | 87 |
| NdeII | GATC | 1 cut(s) | 271 |
| NlaIII | CATG | 2 cut(s) | 481, 492 |
| NlaIV | GGNNCC | 1 cut(s) | 289 |
| PfeI | GAWTC | 4 cut(s) | 36, 119, 125, 419 |
| PleI | GAGTC | 2 cut(s) | 305, 433 |
| PpsI | GAGTC | 2 cut(s) | 305, 433 |
| Psp124BI | GAGCTC | 1 cut(s) | 375 |
| PspN4I | GGNNCC | 1 cut(s) | 289 |
| PspPI | GGNCC | 1 cut(s) | 288 |
| RsaI | GTAC | 1 cut(s) | 105 |
| RsaNI | GTAC | 1 cut(s) | 104 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SacI | GAGCTC | 1 cut(s) | 375 |
| Sau3AI | GATC | 1 cut(s) | 271 |
| Sau96I | GGNCC | 1 cut(s) | 288 |
| SchI | GAGTC | 2 cut(s) | 305, 434 |
| SduI | GDGCHC | 1 cut(s) | 375 |
| SetI | ASST | 7 cut(s) | 118, 169, 298, 304, 331, 375, 391 |
| SinI | GGWCC | 1 cut(s) | 288 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| SmlI | CTYRAG | 2 cut(s) | 374, 455 |
| SmoI | CTYRAG | 2 cut(s) | 374, 455 |
| Sse9I | AATT | 3 cut(s) | 67, 82, 408 |
| SspMI | CTAG | 3 cut(s) | 96, 240, 248 |
| SstI | GAGCTC | 1 cut(s) | 375 |
| TaaI | ACNGT | 1 cut(s) | 103 |
| TaqI | TCGA | 2 cut(s) | 143, 281 |
| TasI | AATT | 3 cut(s) | 67, 82, 408 |
| TatI | WGTACW | 1 cut(s) | 103 |
| TfiI | GAWTC | 4 cut(s) | 36, 119, 125, 419 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TspDTI | ATGAA | 3 cut(s) | 174, 225, 479 |
| TspRI | CASTG | 1 cut(s) | 106 |
| VpaK11BI | GGWCC | 1 cut(s) | 288 |
| XapI | RAATTY | 1 cut(s) | 82 |
| XspI | CTAG | 3 cut(s) | 96, 240, 248 |